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+ export BASE_REPO=omero-insight.git
+ BASE_REPO=omero-insight.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-insight-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-insight-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-insight-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-09-11 10:17:41,893 [  scc.config] DEBUG Found github.token
2024-09-11 10:17:41,897 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-11 10:17:42,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:17:42,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:17:42,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-11 10:17:42,828 [      scc.gh] DEBUG 3706 remaining from 5000 (Reset at 10:09
2024-09-11 10:17:42,829 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-11 10:17:42,834 [     scc.git] DEBUG Check current status
2024-09-11 10:17:42,834 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 10:17:42,840 [     scc.git] DEBUG efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-11 10:17:42,840 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 10:17:42,894 [  scc.config] DEBUG Found remote.origin.url
2024-09-11 10:17:43,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-09-11 10:17:43,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-11 10:17:44,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-11 10:17:44,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-11 10:17:45,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-11 10:17:45,043 [     scc.git] DEBUG Resetting...
2024-09-11 10:17:45,043 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-11 10:17:45,063 [     scc.git] DEBUG HEAD is now at efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-11 10:17:45,065 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-11 10:17:45,131 [     scc.git] DEBUG Check current status
2024-09-11 10:17:45,131 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 10:17:45,137 [     scc.git] DEBUG efbf7e35c Bump version: 5.8.4 → 5.8.5-SNAPSHOT
2024-09-11 10:17:45,138 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 10:17:45,183 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-11 10:17:45,183 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-11 10:17:45,183 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-11 10:17:45,183 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-11 10:17:45,183 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-11 10:17:45,183 [    scc.repo] DEBUG ## PRs found:
2024-09-11 10:17:45,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-09-11 10:17:46,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/446 HTTP/1.1" 200 None
2024-09-11 10:17:46,174 [    scc.repo] DEBUG   - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-11 10:17:46,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445 HTTP/1.1" 200 None
2024-09-11 10:17:47,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445/comments HTTP/1.1" 200 None
2024-09-11 10:17:47,094 [    scc.repo] DEBUG   - PR 445 dominikl 'Bump gateway'
2024-09-11 10:17:47,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444 HTTP/1.1" 200 None
2024-09-11 10:17:48,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444/comments HTTP/1.1" 200 None
2024-09-11 10:17:48,019 [    scc.repo] DEBUG   - PR 444 jburel 'fix endpoint'
2024-09-11 10:17:48,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2024-09-11 10:17:48,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442 HTTP/1.1" 200 None
2024-09-11 10:17:49,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442/comments HTTP/1.1" 200 None
2024-09-11 10:17:49,374 [    scc.repo] DEBUG   - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-11 10:17:49,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-09-11 10:17:50,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-09-11 10:17:50,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-09-11 10:17:51,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-09-11 10:17:51,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-09-11 10:17:51,643 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-11 10:17:52,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-09-11 10:17:52,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-09-11 10:17:52,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-09-11 10:17:53,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-09-11 10:17:53,599 [    scc.repo] DEBUG ## Branches found:
2024-09-11 10:17:53,600 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 10:17:53,600 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:17:53,604 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-11 10:17:53,609 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-11 10:17:53,609 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-11 10:17:53,614 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-11 10:17:53,619 [     scc.git] DEBUG Already up to date.

2024-09-11 10:17:53,619 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-09-11 10:17:54,351 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-11 10:17:54,351 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-09-11 10:17:54,357 [     scc.git] DEBUG Calling 'git fetch origin pull/442/head'
2024-09-11 10:17:54,789 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-11 10:17:54,790 [     scc.git] DEBUG  * branch                refs/pull/442/head -> FETCH_HEAD
2024-09-11 10:17:54,798 [     scc.git] DEBUG Calling 'git fetch origin pull/444/head'
2024-09-11 10:17:55,221 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-11 10:17:55,221 [     scc.git] DEBUG  * branch                refs/pull/444/head -> FETCH_HEAD
2024-09-11 10:17:55,227 [     scc.git] DEBUG Calling 'git fetch origin pull/445/head'
2024-09-11 10:17:55,518 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-11 10:17:55,519 [     scc.git] DEBUG  * branch                refs/pull/445/head -> FETCH_HEAD
2024-09-11 10:17:55,524 [     scc.git] DEBUG Calling 'git fetch origin pull/446/head'
2024-09-11 10:17:55,819 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-11 10:17:55,819 [     scc.git] DEBUG  * branch                refs/pull/446/head -> FETCH_HEAD
2024-09-11 10:17:55,823 [     scc.git] DEBUG ## Unique users: []
2024-09-11 10:17:55,824 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 10:17:55,824 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:17:55,827 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-11 10:17:55,833 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:17:55,837 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-11 10:17:55,920 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 10:17:55,923 [     scc.git] DEBUG  .../shoola/agents/measurement/view/ServerROITable.java      | 13 ++++++++++---
2024-09-11 10:17:55,923 [     scc.git] DEBUG  1 file changed, 10 insertions(+), 3 deletions(-)
2024-09-11 10:17:56,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:17:56,060 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-11 10:17:56,066 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:17:56,070 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 442 (Remove duplicate app_name parameter) 9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-11 10:17:56,393 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 10:17:56,397 [     scc.git] DEBUG  .../java/org/openmicroscopy/shoola/svc/proxy/MessengerRequest.java    | 4 +---
2024-09-11 10:17:56,397 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 3 deletions(-)
2024-09-11 10:17:56,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:17:56,526 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-11 10:17:56,532 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:17:56,536 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 444 (fix endpoint) 2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-11 10:17:56,656 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 10:17:56,659 [     scc.git] DEBUG  .../java/org/openmicroscopy/shoola/env/data/DataServicesFactory.java    | 2 +-
2024-09-11 10:17:56,659 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-11 10:17:56,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:17:56,919 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f9d5c87518fbe8273e949ab3206a1e23fa4aec8b'
2024-09-11 10:17:56,926 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:17:56,932 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 445 (Bump gateway) f9d5c87518fbe8273e949ab3206a1e23fa4aec8b'
2024-09-11 10:17:56,961 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 10:17:56,964 [     scc.git] DEBUG  build.gradle | 2 +-
2024-09-11 10:17:56,964 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-11 10:17:57,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:17:57,312 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-11 10:17:57,318 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:17:57,323 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 446 (Add changelog for upcoming 5.8.5 release) dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-11 10:17:57,437 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-09-11 10:17:57,440 [     scc.git] DEBUG  CHANGELOG.md | 10 +++++++++-
2024-09-11 10:17:57,440 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 1 deletion(-)
2024-09-11 10:17:57,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:17:57,721 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-11 10:17:57,762 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 10:17:57,763 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:17:57,768 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-11 10:17:57,804 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f6952a82e50> has no local changes
2024-09-11 10:17:57,805 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-insight
Excluded PRs:
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 436 dominikl 'Update apache common libs' (exclude comment)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 442 dominikl 'Remove duplicate app_name parameter'
  - PR 444 jburel 'fix endpoint'
  - PR 445 dominikl 'Bump gateway'
  - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'

Generated by OMERO-insight-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/168/)'
2024-09-11 10:17:57,819 [     scc.git] DEBUG [detached HEAD b279ecdd2] merge master -Dorg -Snone
2024-09-11 10:17:57,819 [   scc.merge] INFO  Repository: ome/omero-insight
2024-09-11 10:17:57,819 [   scc.merge] INFO  Excluded PRs:
2024-09-11 10:17:57,819 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2024-09-11 10:17:57,819 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-09-11 10:17:57,819 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs' (exclude comment)
2024-09-11 10:17:57,819 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-09-11 10:17:57,819 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
2024-09-11 10:17:57,819 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-09-11 10:17:57,819 [   scc.merge] INFO  Already up to date.
2024-09-11 10:17:57,819 [   scc.merge] INFO  
2024-09-11 10:17:57,819 [   scc.merge] INFO  Merged PRs:
2024-09-11 10:17:57,819 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-11 10:17:57,819 [   scc.merge] INFO    - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-11 10:17:57,819 [   scc.merge] INFO    - PR 444 jburel 'fix endpoint'
2024-09-11 10:17:57,820 [   scc.merge] INFO    - PR 445 dominikl 'Bump gateway'
2024-09-11 10:17:57,820 [   scc.merge] INFO    - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-11 10:17:57,820 [   scc.merge] INFO  
2024-09-11 10:17:57,820 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-11 10:17:57,820 [     scc.git] DEBUG Calling 'git remote'
Merge all submodules2024-09-11 10:17:58,346 [  scc.config] DEBUG Found github.token
2024-09-11 10:17:58,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-09-11 10:17:58,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:17:58,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:17:59,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-09-11 10:17:59,332 [      scc.gh] DEBUG 3638 remaining from 5000 (Reset at 10:09
2024-09-11 10:17:59,332 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-09-11 10:17:59,337 [     scc.git] DEBUG Check current status
2024-09-11 10:17:59,337 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 10:17:59,341 [     scc.git] DEBUG b279ecdd2 merge master -Dorg -Snone
2024-09-11 10:17:59,341 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 10:17:59,389 [  scc.config] DEBUG Found remote.origin.url
2024-09-11 10:17:59,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight HTTP/1.1" 200 None
2024-09-11 10:18:00,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-09-11 10:18:00,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-09-11 10:18:01,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-09-11 10:18:01,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-09-11 10:18:01,521 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 10:18:01,563 [     scc.git] DEBUG Resetting...
2024-09-11 10:18:01,563 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-09-11 10:18:01,580 [     scc.git] DEBUG HEAD is now at b279ecdd2 merge master -Dorg -Snone
2024-09-11 10:18:01,581 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-09-11 10:18:01,622 [     scc.git] DEBUG Check current status
2024-09-11 10:18:01,622 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-09-11 10:18:01,627 [     scc.git] DEBUG b279ecdd2 merge master -Dorg -Snone
2024-09-11 10:18:01,627 [     scc.git] DEBUG Calling 'git submodule status'
2024-09-11 10:18:01,670 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-09-11 10:18:01,670 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-09-11 10:18:01,670 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-09-11 10:18:01,670 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-09-11 10:18:01,670 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-09-11 10:18:01,670 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-09-11 10:18:01,670 [    scc.repo] DEBUG ## PRs found:
2024-09-11 10:18:02,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/pulls HTTP/1.1" 200 None
2024-09-11 10:18:02,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/446 HTTP/1.1" 200 None
2024-09-11 10:18:03,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-11 10:18:03,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 10:18:04,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 10:18:04,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-11 10:18:04,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/dff7f109472118e0a3ef88bf89467402d9cbfa93?per_page=1 HTTP/1.1" 200 None
2024-09-11 10:18:05,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93 HTTP/1.1" 200 None
2024-09-11 10:18:05,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/dff7f109472118e0a3ef88bf89467402d9cbfa93/status HTTP/1.1" 200 None
2024-09-11 10:18:05,736 [    scc.repo] DEBUG   - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-11 10:18:06,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445 HTTP/1.1" 200 None
2024-09-11 10:18:06,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/445/comments HTTP/1.1" 200 None
2024-09-11 10:18:07,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b HTTP/1.1" 200 None
2024-09-11 10:18:07,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 10:18:08,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/f9d5c87518fbe8273e949ab3206a1e23fa4aec8b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 10:18:08,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444 HTTP/1.1" 200 None
2024-09-11 10:18:08,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/444/comments HTTP/1.1" 200 None
2024-09-11 10:18:09,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-11 10:18:09,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 10:18:10,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 10:18:10,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-11 10:18:11,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/2c097b44fcac5cd272b1c0a05a7336d988b5c65b?per_page=1 HTTP/1.1" 200 None
2024-09-11 10:18:11,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b HTTP/1.1" 200 None
2024-09-11 10:18:12,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/2c097b44fcac5cd272b1c0a05a7336d988b5c65b/status HTTP/1.1" 200 None
2024-09-11 10:18:12,158 [    scc.repo] DEBUG   - PR 444 jburel 'fix endpoint'
2024-09-11 10:18:12,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/443 HTTP/1.1" 200 None
2024-09-11 10:18:13,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442 HTTP/1.1" 200 None
2024-09-11 10:18:13,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/442/comments HTTP/1.1" 200 None
2024-09-11 10:18:14,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-11 10:18:14,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 10:18:14,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 10:18:15,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-11 10:18:15,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9f3d273acb87527eed99aedd868bf0a4ec1b5861?per_page=1 HTTP/1.1" 200 None
2024-09-11 10:18:16,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861 HTTP/1.1" 200 None
2024-09-11 10:18:16,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9f3d273acb87527eed99aedd868bf0a4ec1b5861/status HTTP/1.1" 200 None
2024-09-11 10:18:16,831 [    scc.repo] DEBUG   - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-11 10:18:17,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/437 HTTP/1.1" 200 None
2024-09-11 10:18:17,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436 HTTP/1.1" 200 None
2024-09-11 10:18:18,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/436/comments HTTP/1.1" 200 None
2024-09-11 10:18:18,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385 HTTP/1.1" 200 None
2024-09-11 10:18:19,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/385/comments HTTP/1.1" 200 None
2024-09-11 10:18:19,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-11 10:18:20,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-09-11 10:18:20,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-09-11 10:18:21,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-11 10:18:21,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/statuses/9466472925265b0b02b7c054c55d62705a9b8215?per_page=1 HTTP/1.1" 200 None
2024-09-11 10:18:21,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215 HTTP/1.1" 200 None
2024-09-11 10:18:22,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/commits/9466472925265b0b02b7c054c55d62705a9b8215/status HTTP/1.1" 200 None
2024-09-11 10:18:22,442 [    scc.repo] DEBUG   - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-11 10:18:22,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333 HTTP/1.1" 200 None
2024-09-11 10:18:23,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/333/comments HTTP/1.1" 200 None
2024-09-11 10:18:23,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310 HTTP/1.1" 200 None
2024-09-11 10:18:24,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-insight/issues/310/comments HTTP/1.1" 200 None
2024-09-11 10:18:24,356 [    scc.repo] DEBUG ## Branches found:
2024-09-11 10:18:24,357 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 10:18:24,357 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:18:24,361 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-09-11 10:18:24,365 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-09-11 10:18:24,365 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-09-11 10:18:24,369 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-09-11 10:18:24,375 [     scc.git] DEBUG Already up to date.

2024-09-11 10:18:24,376 [     scc.git] DEBUG Calling 'git fetch origin pull/385/head'
2024-09-11 10:18:24,675 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-11 10:18:24,676 [     scc.git] DEBUG  * branch                refs/pull/385/head -> FETCH_HEAD
2024-09-11 10:18:24,680 [     scc.git] DEBUG Calling 'git fetch origin pull/442/head'
2024-09-11 10:18:24,980 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-11 10:18:24,980 [     scc.git] DEBUG  * branch                refs/pull/442/head -> FETCH_HEAD
2024-09-11 10:18:24,985 [     scc.git] DEBUG Calling 'git fetch origin pull/444/head'
2024-09-11 10:18:25,286 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-11 10:18:25,286 [     scc.git] DEBUG  * branch                refs/pull/444/head -> FETCH_HEAD
2024-09-11 10:18:25,291 [     scc.git] DEBUG Calling 'git fetch origin pull/446/head'
2024-09-11 10:18:25,572 [     scc.git] DEBUG From https://github.com/ome/omero-insight
2024-09-11 10:18:25,572 [     scc.git] DEBUG  * branch                refs/pull/446/head -> FETCH_HEAD
2024-09-11 10:18:25,577 [     scc.git] DEBUG ## Unique users: []
2024-09-11 10:18:25,578 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 10:18:25,578 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:18:25,582 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-11 10:18:25,588 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:18:25,592 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 385 (handle case where ROI is not longer in table) 9466472925265b0b02b7c054c55d62705a9b8215'
2024-09-11 10:18:25,599 [     scc.git] DEBUG Already up to date.
2024-09-11 10:18:25,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:18:25,746 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-11 10:18:25,752 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:18:25,757 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 442 (Remove duplicate app_name parameter) 9f3d273acb87527eed99aedd868bf0a4ec1b5861'
2024-09-11 10:18:25,763 [     scc.git] DEBUG Already up to date.
2024-09-11 10:18:26,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:18:26,138 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-11 10:18:26,145 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:18:26,150 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 444 (fix endpoint) 2c097b44fcac5cd272b1c0a05a7336d988b5c65b'
2024-09-11 10:18:26,156 [     scc.git] DEBUG Already up to date.
2024-09-11 10:18:26,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:18:26,537 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-11 10:18:26,546 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:18:26,551 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 446 (Add changelog for upcoming 5.8.5 release) dff7f109472118e0a3ef88bf89467402d9cbfa93'
2024-09-11 10:18:26,564 [     scc.git] DEBUG Already up to date.
2024-09-11 10:18:26,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-09-11 10:18:26,917 [     scc.git] DEBUG Calling 'git submodule update'
2024-09-11 10:18:26,962 [     scc.git] DEBUG Get sha1 of %s
2024-09-11 10:18:26,962 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-09-11 10:18:26,966 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-09-11 10:18:27,011 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-09-11 10:18:27,024 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fe0cd46fe50> has no local changes
2024-09-11 10:18:27,025 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-insight
Excluded PRs:
  - PR 445 dominikl 'Bump gateway' (status: cancelled)
  - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
  - PR 437 dominikl 'Remove apache commons io' (stage: draft)
  - PR 436 dominikl 'Update apache common libs' (exclude comment)
  - PR 377 sukunis 'Fix ontology loads' (exclude comment)
  - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
  - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
Already up to date.

Merged PRs:
  - PR 385 jburel 'handle case where ROI is not longer in table'
  - PR 442 dominikl 'Remove duplicate app_name parameter'
  - PR 444 jburel 'fix endpoint'
  - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'

Generated by OMERO-insight-push#168 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-insight-push/168/)'
2024-09-11 10:18:27,041 [     scc.git] DEBUG [detached HEAD fa83a1c57] merge master -Dorg -Ssuccess-only
2024-09-11 10:18:27,041 [   scc.merge] INFO  Repository: ome/omero-insight
2024-09-11 10:18:27,041 [   scc.merge] INFO  Excluded PRs:
2024-09-11 10:18:27,041 [   scc.merge] INFO    - PR 445 dominikl 'Bump gateway' (status: cancelled)
2024-09-11 10:18:27,041 [   scc.merge] INFO    - PR 443 Tom-TBT 'Perceptibly uniform luts for OMERO.insight' (user: Tom-TBT)
2024-09-11 10:18:27,041 [   scc.merge] INFO    - PR 437 dominikl 'Remove apache commons io' (stage: draft)
2024-09-11 10:18:27,041 [   scc.merge] INFO    - PR 436 dominikl 'Update apache common libs' (exclude comment)
2024-09-11 10:18:27,041 [   scc.merge] INFO    - PR 377 sukunis 'Fix ontology loads' (exclude comment)
2024-09-11 10:18:27,041 [   scc.merge] INFO    - PR 333 jburel 'drop compatibility to test new Jenkins' (exclude comment)
2024-09-11 10:18:27,042 [   scc.merge] INFO    - PR 310 dominikl 'Add depth option to importer and include ZarrReader' (exclude comment)
2024-09-11 10:18:27,042 [   scc.merge] INFO  Already up to date.
2024-09-11 10:18:27,042 [   scc.merge] INFO  
2024-09-11 10:18:27,042 [   scc.merge] INFO  Merged PRs:
2024-09-11 10:18:27,042 [   scc.merge] INFO    - PR 385 jburel 'handle case where ROI is not longer in table'
2024-09-11 10:18:27,042 [   scc.merge] INFO    - PR 442 dominikl 'Remove duplicate app_name parameter'
2024-09-11 10:18:27,042 [   scc.merge] INFO    - PR 444 jburel 'fix endpoint'
2024-09-11 10:18:27,042 [   scc.merge] INFO    - PR 446 dominikl 'Add changelog for upcoming 5.8.5 release'
2024-09-11 10:18:27,042 [   scc.merge] INFO  
2024-09-11 10:18:27,042 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-09-11 10:18:27,042 [     scc.git] DEBUG Calling 'git remote'
Update component versions
Updating omero-gateway from 5.9.3 to 5.9.4-SNAPSHOT
Commit all component version changes
[detached HEAD 27670760b] Update component versions
 1 file changed, 1 insertion(+), 1 deletion(-)
2024-09-11 10:18:33,009 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-insight/tree/merge_ci