Skipping 133 KB..
Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
2024-12-01 00:43:37,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-01 00:43:38,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2024-12-01 00:43:38,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:43:38,684 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-12-01 00:43:39,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2024-12-01 00:43:39,149 [ scc.repo] DEBUG # ... Include label: dependencies
2024-12-01 00:43:39,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-12-01 00:43:40,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:43:40,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-01 00:43:41,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-12-01 00:43:41,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:43:41,677 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-12-01 00:43:41,677 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:43:41,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-12-01 00:43:41,677 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:43:41,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:41,683 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:43:41,688 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:43:41,688 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:43:41,693 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:43:41,698 [ scc.git] DEBUG Already up to date.
2024-12-01 00:43:41,698 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2024-12-01 00:43:41,995 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-01 00:43:41,996 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2024-12-01 00:43:42,000 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2024-12-01 00:43:42,310 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-01 00:43:42,311 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2024-12-01 00:43:42,315 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2024-12-01 00:43:42,612 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-01 00:43:42,612 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2024-12-01 00:43:42,617 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2024-12-01 00:43:42,901 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-01 00:43:42,901 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2024-12-01 00:43:42,906 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2024-12-01 00:43:43,187 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-01 00:43:43,188 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2024-12-01 00:43:43,192 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2024-12-01 00:43:43,489 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-01 00:43:43,490 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2024-12-01 00:43:43,495 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:43:43,495 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:43:43,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:43,501 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-12-01 00:43:43,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:43,513 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-12-01 00:43:43,524 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:43:43,529 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2024-12-01 00:43:43,529 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2024-12-01 00:43:43,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:43:43,667 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-12-01 00:43:43,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:43,679 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-12-01 00:43:43,700 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-01 00:43:43,700 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:43:43,705 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2024-12-01 00:43:43,706 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2024-12-01 00:43:44,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:43:44,078 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-01 00:43:44,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:44,091 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-01 00:43:44,109 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-01 00:43:44,110 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-12-01 00:43:44,110 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-01 00:43:44,110 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-01 00:43:44,117 [ scc.git] DEBUG Calling 'git reset --hard 227d1ef468855a138e59d2a377408dd624230b57'
2024-12-01 00:43:44,126 [ scc.git] DEBUG HEAD is now at 227d1ef merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2024-12-01 00:43:44,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:43:44,466 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-01 00:43:44,474 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-12-01 00:43:44,479 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#264](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2024-12-01 00:43:44,484 [ scc.config] DEBUG Found github.token
2024-12-01 00:43:44,485 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2024-12-01 00:43:44,485 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-12-01 00:43:44,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:44,496 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-12-01 00:43:44,570 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-01 00:43:44,571 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:43:44,576 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2024-12-01 00:43:44,576 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2024-12-01 00:43:44,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:43:44,908 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-12-01 00:43:44,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:44,922 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-12-01 00:43:45,055 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-01 00:43:45,056 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:43:45,061 [ scc.git] DEBUG package-lock.json | 6 +++---
2024-12-01 00:43:45,061 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2024-12-01 00:43:45,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:43:45,309 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-01 00:43:45,403 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:45,409 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-01 00:43:45,521 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-01 00:43:45,521 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-12-01 00:43:45,522 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-01 00:43:45,522 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-01 00:43:45,528 [ scc.git] DEBUG Calling 'git reset --hard 44398c69ecb2cd63985829bcae3c9f2f2cd43129'
2024-12-01 00:43:45,535 [ scc.git] DEBUG HEAD is now at 44398c6 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2024-12-01 00:43:45,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:43:45,692 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-01 00:43:45,698 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-12-01 00:43:45,703 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#264](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2024-12-01 00:43:45,708 [ scc.config] DEBUG Found github.token
2024-12-01 00:43:45,708 [ scc.git] DEBUG Adding comment to issue #118.
2024-12-01 00:43:46,451 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394
2024-12-01 00:43:46,452 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:43:46,495 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:43:46,496 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:46,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:43:46,540 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:43:46,548 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6471d63f40> has no local changes
2024-12-01 00:43:46,548 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:43:46,556 [ scc.git] DEBUG [detached HEAD 44de826] merge master -Dorg -Ssuccess-only
2024-12-01 00:43:46,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:43:46,557 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:43:46,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-12-01 00:43:47,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2024-12-01 00:43:47,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2024-12-01 00:43:48,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-12-01 00:43:48,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-12-01 00:43:49,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-12-01 00:43:49,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:43:50,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-01 00:43:50,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-12-01 00:43:51,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:43:51,306 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-12-01 00:43:51,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-12-01 00:43:52,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-12-01 00:43:52,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-12-01 00:43:53,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:43:53,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-01 00:43:54,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-12-01 00:43:54,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:43:54,603 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-12-01 00:43:55,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-12-01 00:43:55,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-12-01 00:43:56,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-12-01 00:43:56,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:43:56,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-12-01 00:43:57,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:43:57,401 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-12-01 00:43:57,402 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:43:57,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-12-01 00:43:57,402 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:43:57,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:57,408 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:43:57,415 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:43:57,415 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:43:57,421 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:43:57,427 [ scc.git] DEBUG Already up to date.
2024-12-01 00:43:57,427 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-12-01 00:43:58,827 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-01 00:43:58,827 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-12-01 00:43:58,833 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-12-01 00:43:59,137 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-01 00:43:59,137 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-12-01 00:43:59,142 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-12-01 00:43:59,432 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-01 00:43:59,432 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-12-01 00:43:59,436 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:43:59,436 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:43:59,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:59,442 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-12-01 00:43:59,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:59,454 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-12-01 00:43:59,598 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-12-01 00:43:59,599 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:43:59,603 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-12-01 00:43:59,603 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-12-01 00:43:59,603 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-12-01 00:43:59,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:43:59,752 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-12-01 00:43:59,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:43:59,769 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-12-01 00:43:59,796 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-12-01 00:43:59,796 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-12-01 00:43:59,796 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-12-01 00:43:59,796 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-12-01 00:43:59,796 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:43:59,802 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-12-01 00:43:59,802 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-12-01 00:43:59,802 [ scc.git] DEBUG src/app/header.html | 5 +
2024-12-01 00:43:59,802 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-12-01 00:43:59,802 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-12-01 00:43:59,802 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-12-01 00:43:59,802 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-12-01 00:43:59,802 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-12-01 00:44:00,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:00,178 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-12-01 00:44:00,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:00,194 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-12-01 00:44:00,209 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-12-01 00:44:00,220 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:44:00,223 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-12-01 00:44:00,223 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-12-01 00:44:00,223 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-12-01 00:44:00,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:00,567 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:44:00,619 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:00,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:00,626 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:44:00,677 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:44:00,688 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f64704c7610> has no local changes
2024-12-01 00:44:00,688 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:44:02,345 [ scc.git] DEBUG [detached HEAD ba2815a] merge master -Dorg -Ssuccess-only
2024-12-01 00:44:02,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:44:02,346 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:44:02,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-12-01 00:44:03,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-12-01 00:44:03,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-12-01 00:44:04,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-12-01 00:44:04,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:05,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-12-01 00:44:05,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:44:05,506 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-12-01 00:44:05,506 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:44:05,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-12-01 00:44:05,507 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:05,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:05,514 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:44:05,520 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:44:05,520 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:44:05,527 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:44:05,535 [ scc.git] DEBUG Already up to date.
2024-12-01 00:44:05,535 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-12-01 00:44:05,936 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-12-01 00:44:05,936 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-12-01 00:44:05,941 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:44:05,942 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:05,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:05,948 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-12-01 00:44:05,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:05,962 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-12-01 00:44:05,974 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:44:05,977 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-12-01 00:44:05,977 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-12-01 00:44:05,977 [ scc.git] DEBUG requirements.txt | 2 +-
2024-12-01 00:44:05,977 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-12-01 00:44:05,977 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-12-01 00:44:05,977 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-12-01 00:44:06,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:06,116 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:44:06,161 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:06,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:06,167 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:44:06,207 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:44:06,215 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f64704dabb0> has no local changes
2024-12-01 00:44:06,215 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:44:06,225 [ scc.git] DEBUG [detached HEAD 6aef22d] merge master -Dorg -Ssuccess-only
2024-12-01 00:44:06,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:44:06,226 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:44:06,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-12-01 00:44:07,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/89 HTTP/1.1" 200 None
2024-12-01 00:44:07,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-12-01 00:44:08,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:08,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-01 00:44:09,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None
2024-12-01 00:44:09,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/dfc227486da13c78bc278fc534e59b40cbc97175?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:44:09,503 [ scc.repo] DEBUG - PR 89 jburel 'Build'
2024-12-01 00:44:09,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-12-01 00:44:10,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-12-01 00:44:10,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-12-01 00:44:11,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:11,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-12-01 00:44:12,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:44:12,333 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-12-01 00:44:12,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-12-01 00:44:13,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-12-01 00:44:13,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-12-01 00:44:14,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:14,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-12-01 00:44:15,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:44:15,158 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-12-01 00:44:15,158 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:44:15,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-12-01 00:44:15,158 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:15,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:15,164 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:44:15,169 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:44:15,169 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:44:15,174 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:44:15,180 [ scc.git] DEBUG Already up to date.
2024-12-01 00:44:15,180 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-12-01 00:44:15,987 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-01 00:44:15,987 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-12-01 00:44:15,992 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-12-01 00:44:16,449 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-01 00:44:16,449 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-12-01 00:44:16,454 [ scc.git] DEBUG Calling 'git fetch origin pull/89/head'
2024-12-01 00:44:17,419 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-01 00:44:17,420 [ scc.git] DEBUG * branch refs/pull/89/head -> FETCH_HEAD
2024-12-01 00:44:17,424 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:44:17,424 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:17,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:17,430 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-01 00:44:17,438 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:17,443 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-01 00:44:17,458 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-12-01 00:44:17,458 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-12-01 00:44:17,458 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-12-01 00:44:17,458 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-12-01 00:44:17,459 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-01 00:44:17,459 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-01 00:44:17,465 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-01 00:44:17,472 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-12-01 00:44:17,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:17,618 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-01 00:44:17,626 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-01 00:44:17,632 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#264](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2024-12-01 00:44:17,637 [ scc.config] DEBUG Found github.token
2024-12-01 00:44:17,637 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-12-01 00:44:17,638 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-01 00:44:17,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:17,650 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-01 00:44:17,668 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-12-01 00:44:17,668 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-12-01 00:44:17,668 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-12-01 00:44:17,668 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-01 00:44:17,669 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-01 00:44:17,676 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-01 00:44:17,683 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0
2024-12-01 00:44:18,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:18,056 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-01 00:44:18,063 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..fc2095901f5dfd24ecd29a99092283f136de04d5'
2024-12-01 00:44:18,069 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#264](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-12-01 00:44:18,074 [ scc.config] DEBUG Found github.token
2024-12-01 00:44:18,075 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-12-01 00:44:18,075 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dfc227486da13c78bc278fc534e59b40cbc97175'
2024-12-01 00:44:18,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:18,087 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 89 (Build) dfc227486da13c78bc278fc534e59b40cbc97175'
2024-12-01 00:44:18,099 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:44:18,101 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-01 00:44:18,101 [ scc.git] DEBUG 1 file changed, 7 insertions(+), 5 deletions(-)
2024-12-01 00:44:18,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:18,460 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:44:18,504 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:18,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:18,510 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:44:18,553 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:44:18,560 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6470480880> has no local changes
2024-12-01 00:44:18,560 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Merged PRs:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:44:18,569 [ scc.git] DEBUG [detached HEAD 33a2093] merge master -Dorg -Ssuccess-only
2024-12-01 00:44:18,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:44:18,569 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:44:19,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-12-01 00:44:19,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-12-01 00:44:19,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-12-01 00:44:20,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-12-01 00:44:20,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-12-01 00:44:21,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-12-01 00:44:21,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-12-01 00:44:21,918 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:44:21,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-12-01 00:44:21,918 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:21,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:21,924 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:44:21,930 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:44:21,930 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:44:21,936 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:44:21,951 [ scc.git] DEBUG Updating 5d441c2..fb5ae86
2024-12-01 00:44:22,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/133 HTTP/1.1" 200 None
2024-12-01 00:44:23,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/129 HTTP/1.1" 200 None
2024-12-01 00:44:24,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/131 HTTP/1.1" 200 None
2024-12-01 00:44:24,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/128 HTTP/1.1" 200 None
2024-12-01 00:44:24,648 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:44:24,648 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:24,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:24,654 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:44:24,703 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:24,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:24,710 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:44:24,754 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:44:24,762 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6470480670> has no local changes
2024-12-01 00:44:24,763 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:44:24,773 [ scc.git] DEBUG [detached HEAD 55eafe8] merge master -Dorg -Ssuccess-only
2024-12-01 00:44:24,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:44:24,773 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:44:25,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-12-01 00:44:25,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None
2024-12-01 00:44:26,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None
2024-12-01 00:44:26,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:27,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-01 00:44:27,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-12-01 00:44:28,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-12-01 00:44:28,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:29,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-12-01 00:44:29,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:44:29,528 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-12-01 00:44:29,528 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:44:29,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-12-01 00:44:29,528 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:29,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:29,535 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:44:29,541 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:44:29,541 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:44:29,548 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:44:29,555 [ scc.git] DEBUG Already up to date.
2024-12-01 00:44:29,555 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-12-01 00:44:29,865 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-12-01 00:44:29,865 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-12-01 00:44:29,869 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:44:29,870 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:29,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:29,877 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-12-01 00:44:29,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:29,891 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-12-01 00:44:29,902 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:44:30,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:30,048 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:44:30,093 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:30,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:30,099 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:44:30,142 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:44:30,148 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f64704ddcd0> has no local changes
2024-12-01 00:44:30,149 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:44:30,157 [ scc.git] DEBUG [detached HEAD 1bfd65d] merge master -Dorg -Ssuccess-only
2024-12-01 00:44:30,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:44:30,158 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:44:30,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-12-01 00:44:31,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None
2024-12-01 00:44:31,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-01 00:44:32,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:32,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-01 00:44:33,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:33,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-01 00:44:34,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None
2024-12-01 00:44:34,246 [ scc.repo] DEBUG - PR 29 jburel 'Build'
2024-12-01 00:44:34,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-12-01 00:44:35,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-12-01 00:44:35,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-12-01 00:44:36,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-12-01 00:44:36,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:37,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-12-01 00:44:37,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:44:37,553 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-12-01 00:44:37,553 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:44:37,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-12-01 00:44:37,553 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:37,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:37,559 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:44:37,564 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:44:37,564 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:44:37,570 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:44:37,578 [ scc.git] DEBUG Already up to date.
2024-12-01 00:44:37,578 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-12-01 00:44:37,880 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-12-01 00:44:37,881 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-12-01 00:44:37,885 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2024-12-01 00:44:38,635 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-12-01 00:44:38,635 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2024-12-01 00:44:38,640 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:44:38,641 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:38,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:38,647 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-12-01 00:44:38,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:38,661 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-12-01 00:44:39,003 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-12-01 00:44:39,003 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:44:39,006 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-12-01 00:44:39,006 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-12-01 00:44:39,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:39,140 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-12-01 00:44:39,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:39,151 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-12-01 00:44:39,465 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:44:39,468 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-01 00:44:39,468 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-01 00:44:39,468 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-)
2024-12-01 00:44:39,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:39,645 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:44:39,689 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:39,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:39,695 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:44:39,738 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:44:39,745 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f64704ac730> has no local changes
2024-12-01 00:44:39,745 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:44:39,754 [ scc.git] DEBUG [detached HEAD 0161c41] merge master -Dorg -Ssuccess-only
2024-12-01 00:44:39,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:44:39,754 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:44:40,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-12-01 00:44:40,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None
2024-12-01 00:44:41,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-12-01 00:44:41,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:42,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-01 00:44:42,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-12-01 00:44:43,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:44:43,162 [ scc.repo] DEBUG - PR 21 jburel 'Build'
2024-12-01 00:44:43,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-12-01 00:44:44,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-12-01 00:44:44,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-12-01 00:44:45,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:45,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-12-01 00:44:46,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:44:46,083 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-12-01 00:44:46,083 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:44:46,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-12-01 00:44:46,084 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:46,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:46,089 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:44:46,094 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:44:46,095 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:44:46,102 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:44:46,108 [ scc.git] DEBUG Already up to date.
2024-12-01 00:44:46,108 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-12-01 00:44:46,425 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-12-01 00:44:46,425 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-12-01 00:44:46,430 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2024-12-01 00:44:46,717 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-12-01 00:44:46,718 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2024-12-01 00:44:46,722 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:44:46,722 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:46,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:46,728 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-01 00:44:46,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:46,738 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-01 00:44:46,808 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-12-01 00:44:46,808 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-12-01 00:44:46,808 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-12-01 00:44:46,808 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-12-01 00:44:46,808 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-12-01 00:44:46,808 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-12-01 00:44:46,808 [ scc.git] DEBUG Auto-merging setup.py
2024-12-01 00:44:46,808 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-12-01 00:44:46,808 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-01 00:44:46,808 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-01 00:44:46,814 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-12-01 00:44:46,821 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-12-01 00:44:46,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:46,987 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-01 00:44:46,993 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-12-01 00:44:46,999 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#264](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/signup_settings.py
- setup.py
- omero_signup/views.py
- omero_signup/urls.py
--conflicts
2024-12-01 00:44:47,004 [ scc.config] DEBUG Found github.token
2024-12-01 00:44:47,004 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-12-01 00:44:47,004 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-12-01 00:44:47,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:47,014 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-12-01 00:44:47,050 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:44:47,053 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-01 00:44:47,053 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-01 00:44:47,053 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-12-01 00:44:47,053 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-12-01 00:44:47,053 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-12-01 00:44:47,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:47,374 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:44:47,414 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:47,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:47,419 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:44:47,458 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:44:47,465 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f64704ac610> has no local changes
2024-12-01 00:44:47,465 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:44:47,473 [ scc.git] DEBUG [detached HEAD 91ecafc] merge master -Dorg -Ssuccess-only
2024-12-01 00:44:47,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:44:47,474 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:44:47,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-12-01 00:44:48,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-12-01 00:44:48,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-12-01 00:44:49,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-12-01 00:44:49,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:50,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-12-01 00:44:50,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:44:50,587 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-12-01 00:44:50,587 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:44:50,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-12-01 00:44:50,588 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:50,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:50,595 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:44:50,600 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:44:50,600 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:44:50,605 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:44:50,611 [ scc.git] DEBUG Already up to date.
2024-12-01 00:44:50,611 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-12-01 00:44:51,091 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-12-01 00:44:51,091 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-12-01 00:44:51,095 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:44:51,095 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:51,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:51,101 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-12-01 00:44:51,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:51,113 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-12-01 00:44:51,126 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:44:51,129 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-12-01 00:44:51,129 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-12-01 00:44:51,129 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-12-01 00:44:51,129 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-12-01 00:44:51,129 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-12-01 00:44:51,129 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-12-01 00:44:51,129 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-12-01 00:44:51,129 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-12-01 00:44:51,129 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-12-01 00:44:51,129 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-12-01 00:44:51,129 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-12-01 00:44:51,132 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-12-01 00:44:51,132 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-12-01 00:44:51,132 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-12-01 00:44:51,132 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-12-01 00:44:51,132 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-12-01 00:44:51,132 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-12-01 00:44:51,132 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-12-01 00:44:51,132 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-12-01 00:44:51,132 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-12-01 00:44:51,132 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-12-01 00:44:51,132 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-12-01 00:44:51,132 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-12-01 00:44:51,132 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-12-01 00:44:51,133 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-12-01 00:44:51,133 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-12-01 00:44:51,133 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-12-01 00:44:51,133 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-12-01 00:44:51,133 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-12-01 00:44:51,133 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-12-01 00:44:51,133 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-12-01 00:44:51,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:51,269 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:44:51,313 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:51,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:51,319 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:44:51,363 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:44:51,370 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f647048ec70> has no local changes
2024-12-01 00:44:51,370 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:44:51,381 [ scc.git] DEBUG [detached HEAD 702054d] merge master -Dorg -Ssuccess-only
2024-12-01 00:44:51,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:44:51,382 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:44:51,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-12-01 00:44:51,694 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:44:51,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-12-01 00:44:51,694 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:51,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:51,700 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:44:51,705 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:44:51,706 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:44:51,711 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:44:51,721 [ scc.git] DEBUG Updating aca9e9c..100f6ae
2024-12-01 00:44:52,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls/13 HTTP/1.1" 200 None
2024-12-01 00:44:52,421 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:44:52,421 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:52,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:52,427 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:44:52,468 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:52,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:52,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:44:52,516 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:44:52,522 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f64704caf40> has no local changes
2024-12-01 00:44:52,522 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:44:52,530 [ scc.git] DEBUG [detached HEAD 915f73e] merge master -Dorg -Ssuccess-only
2024-12-01 00:44:52,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:44:52,531 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:44:52,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2024-12-01 00:44:53,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None
2024-12-01 00:44:53,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-12-01 00:44:54,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:54,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-01 00:44:55,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-12-01 00:44:55,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:44:55,826 [ scc.repo] DEBUG - PR 20 jburel 'Build'
2024-12-01 00:44:55,826 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:44:55,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-12-01 00:44:55,827 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:55,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:55,832 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:44:55,837 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:44:55,837 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:44:55,842 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:44:55,847 [ scc.git] DEBUG Already up to date.
2024-12-01 00:44:55,848 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head'
2024-12-01 00:44:56,327 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2024-12-01 00:44:56,328 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD
2024-12-01 00:44:56,332 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:44:56,332 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:56,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:56,338 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea'
2024-12-01 00:44:56,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:56,348 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea'
2024-12-01 00:44:56,393 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:44:56,396 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-01 00:44:56,396 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-01 00:44:56,397 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-12-01 00:44:56,397 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-12-01 00:44:56,397 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-12-01 00:44:56,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:44:56,530 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:44:56,571 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:44:56,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:44:56,577 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:44:56,615 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:44:56,621 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f64704aff70> has no local changes
2024-12-01 00:44:56,621 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:44:56,630 [ scc.git] DEBUG [detached HEAD 895873e] merge master -Dorg -Ssuccess-only
2024-12-01 00:44:56,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:44:56,630 [ scc.git] INFO Overriding base-branch from master to main
2024-12-01 00:44:56,630 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:44:57,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-12-01 00:44:57,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2024-12-01 00:44:58,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2024-12-01 00:44:58,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2024-12-01 00:44:59,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:44:59,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-01 00:44:59,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None
2024-12-01 00:45:00,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None
2024-12-01 00:45:00,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None
2024-12-01 00:45:01,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:45:01,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-01 00:45:02,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-12-01 00:45:02,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-12-01 00:45:03,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-12-01 00:45:03,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-12-01 00:45:04,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:45:04,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-12-01 00:45:05,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:45:05,200 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-12-01 00:45:05,201 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:45:05,201 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-12-01 00:45:05,201 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:05,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:05,207 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-12-01 00:45:05,211 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:45:05,212 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-12-01 00:45:05,217 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-12-01 00:45:05,222 [ scc.git] DEBUG Already up to date.
2024-12-01 00:45:05,222 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-12-01 00:45:05,585 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-12-01 00:45:05,585 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-12-01 00:45:05,590 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:45:05,590 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:05,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:05,596 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-01 00:45:05,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:05,608 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-01 00:45:05,619 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-12-01 00:45:05,619 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-12-01 00:45:05,619 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-01 00:45:05,620 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-01 00:45:05,626 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-12-01 00:45:05,633 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-12-01 00:45:05,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:05,767 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-01 00:45:05,772 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-12-01 00:45:05,778 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#264](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-12-01 00:45:05,784 [ scc.config] DEBUG Found github.token
2024-12-01 00:45:05,784 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-12-01 00:45:05,784 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:45:05,823 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:05,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:05,828 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:45:05,868 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:45:05,874 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f647041eaf0> has no local changes
2024-12-01 00:45:05,874 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:45:05,884 [ scc.git] DEBUG [detached HEAD eb00bab] merge master -Dorg -Ssuccess-only
2024-12-01 00:45:05,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:05,884 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:45:06,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-12-01 00:45:06,202 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:45:06,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-12-01 00:45:06,202 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:06,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:06,208 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:45:06,213 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:45:06,213 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:45:06,218 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:45:06,227 [ scc.git] DEBUG Updating adfa132..70b01ed
2024-12-01 00:45:06,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls/24 HTTP/1.1" 200 None
2024-12-01 00:45:06,910 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:45:06,910 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:06,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:06,916 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:45:06,953 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:06,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:06,959 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:45:06,999 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:45:07,005 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f647041ea30> has no local changes
2024-12-01 00:45:07,005 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:45:07,013 [ scc.git] DEBUG [detached HEAD d834272] merge master -Dorg -Ssuccess-only
2024-12-01 00:45:07,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:07,014 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:45:07,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-12-01 00:45:07,342 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:45:07,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-12-01 00:45:07,342 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:07,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:07,348 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:45:07,352 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:45:07,352 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:45:07,358 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:45:07,367 [ scc.git] DEBUG Updating 8da48e1..5bfef29
2024-12-01 00:45:07,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls/36 HTTP/1.1" 200 None
2024-12-01 00:45:07,995 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:45:07,995 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:07,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:08,001 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:45:08,042 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:08,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:08,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:45:08,089 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:45:08,097 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f64703c48b0> has no local changes
2024-12-01 00:45:08,097 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:45:08,119 [ scc.git] DEBUG [detached HEAD 4b60766] merge master -Dorg -Ssuccess-only
2024-12-01 00:45:08,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:08,120 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:45:08,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-12-01 00:45:09,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-12-01 00:45:09,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-12-01 00:45:10,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-12-01 00:45:10,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:45:11,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-12-01 00:45:11,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:45:11,489 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-12-01 00:45:11,489 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:45:11,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-12-01 00:45:11,489 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:11,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:11,495 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-01 00:45:11,500 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:45:11,500 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-01 00:45:11,506 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-01 00:45:11,512 [ scc.git] DEBUG Already up to date.
2024-12-01 00:45:11,512 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-12-01 00:45:11,971 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-12-01 00:45:11,971 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-12-01 00:45:11,976 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:45:11,976 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:11,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:11,982 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-01 00:45:11,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:11,994 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-01 00:45:12,112 [ scc.git] DEBUG Auto-merging Dockerfile
2024-12-01 00:45:12,113 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-12-01 00:45:12,113 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-01 00:45:12,113 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-01 00:45:12,120 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-12-01 00:45:12,127 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-12-01 00:45:12,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:12,274 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-01 00:45:12,281 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-12-01 00:45:12,286 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#264](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-12-01 00:45:12,291 [ scc.config] DEBUG Found github.token
2024-12-01 00:45:12,291 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-12-01 00:45:12,291 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:45:12,333 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:12,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:12,338 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:45:12,383 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:45:12,392 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f64703c45b0> has no local changes
2024-12-01 00:45:12,392 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:45:12,404 [ scc.git] DEBUG [detached HEAD f759d4d] merge master -Dorg -Ssuccess-only
2024-12-01 00:45:12,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:12,405 [ scc.git] INFO Overriding base-branch from master to develop
2024-12-01 00:45:12,405 [ scc.repo] DEBUG ## PRs found:
2024-12-01 00:45:12,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-12-01 00:45:13,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-12-01 00:45:13,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-12-01 00:45:14,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-12-01 00:45:14,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:45:15,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-01 00:45:15,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-12-01 00:45:15,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:45:15,893 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-12-01 00:45:16,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-12-01 00:45:16,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-12-01 00:45:17,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None
2024-12-01 00:45:17,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-12-01 00:45:18,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-12-01 00:45:18,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-12-01 00:45:19,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-12-01 00:45:19,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-12-01 00:45:20,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-01 00:45:20,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-12-01 00:45:20,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-12-01 00:45:20,975 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-12-01 00:45:21,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-12-01 00:45:21,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-12-01 00:45:22,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-12-01 00:45:23,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-12-01 00:45:23,087 [ scc.repo] DEBUG ## Branches found:
2024-12-01 00:45:23,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-12-01 00:45:23,087 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:23,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:23,094 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-12-01 00:45:23,101 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-01 00:45:23,101 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-12-01 00:45:23,107 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-12-01 00:45:23,114 [ scc.git] DEBUG Already up to date.
2024-12-01 00:45:23,114 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-12-01 00:45:23,751 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-12-01 00:45:23,752 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-12-01 00:45:23,756 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-12-01 00:45:24,332 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-12-01 00:45:24,332 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-12-01 00:45:24,336 [ scc.git] DEBUG ## Unique users: []
2024-12-01 00:45:24,336 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:24,337 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:24,342 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-01 00:45:24,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:24,355 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-01 00:45:24,366 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-12-01 00:45:24,366 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-12-01 00:45:24,366 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-01 00:45:24,366 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-01 00:45:24,372 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-12-01 00:45:24,379 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-12-01 00:45:24,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:24,524 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-01 00:45:24,532 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-12-01 00:45:24,539 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#264](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-12-01 00:45:24,544 [ scc.config] DEBUG Found github.token
2024-12-01 00:45:24,545 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-12-01 00:45:24,545 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-12-01 00:45:24,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:24,556 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-12-01 00:45:24,576 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-01 00:45:24,579 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-12-01 00:45:24,579 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-12-01 00:45:24,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:24,914 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-01 00:45:24,953 [ scc.git] DEBUG Get sha1 of %s
2024-12-01 00:45:24,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-01 00:45:24,959 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:45:24,997 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:45:25,004 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6470444f10> has no local changes
2024-12-01 00:45:25,005 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:45:25,013 [ scc.git] DEBUG [detached HEAD 8863c45] merge master -Dorg -Ssuccess-only
2024-12-01 00:45:25,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:25,014 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-01 00:45:25,091 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-12-01 00:45:25,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:25,307 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-12-01 00:45:25,313 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-12-01 00:45:25,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:25,689 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-12-01 00:45:25,694 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-12-01 00:45:26,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:26,076 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-12-01 00:45:26,080 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-12-01 00:45:26,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:26,481 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-12-01 00:45:26,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:26,888 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-12-01 00:45:26,893 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-12-01 00:45:27,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:27,278 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-12-01 00:45:27,285 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-12-01 00:45:27,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:27,676 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-12-01 00:45:27,681 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-12-01 00:45:28,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:28,062 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-12-01 00:45:28,068 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-12-01 00:45:28,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:28,462 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-12-01 00:45:28,467 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-12-01 00:45:28,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:28,863 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-12-01 00:45:28,868 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-12-01 00:45:29,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:29,260 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-12-01 00:45:29,265 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-12-01 00:45:29,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:29,641 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-12-01 00:45:29,646 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-12-01 00:45:30,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:30,037 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-12-01 00:45:30,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:30,432 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-12-01 00:45:30,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:30,814 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-12-01 00:45:30,819 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-12-01 00:45:31,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:31,204 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-12-01 00:45:31,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:31,605 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-12-01 00:45:31,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:31,987 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-12-01 00:45:31,992 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-12-01 00:45:32,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:32,373 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-12-01 00:45:32,377 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-12-01 00:45:32,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:32,767 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-12-01 00:45:32,773 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-12-01 00:45:33,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:33,154 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-12-01 00:45:33,159 [ scc.config] DEBUG Found submodule.scripts.url
2024-12-01 00:45:33,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-01 00:45:33,537 [ scc.config] DEBUG Found submodule.scripts.branch
2024-12-01 00:45:33,538 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-01 00:45:33,615 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f647518dee0> has local changes
2024-12-01 00:45:33,615 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`'
- PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`'
- PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`'
- PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`'
- PR 411 dependabot[bot] 'Bump omero-figure from `24444fe` to `1dfb138`'
Repository: ome/minimal-omero-client
Updating 4628e82..ca8c2ea
Previously merged:
- PR 67 jburel 'Gateway 5.10.0'
- PR 68 jburel 'Bump action '
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Updating 027b3e6..4777ef8
Previously merged:
- PR 27 jburel 'Build'
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 59 will-moore 'Apply settings to Plate' (status: failure)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Updating 9b73dd9..11d3587
Previously merged:
- PR 165 jburel 'Build'
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 600 Rdornier 'Label on rois' (user: Rdornier)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.
Merged PRs:
- PR 592 will-moore 'Filter owners and groups dropdown lists'
- PR 602 will-moore 'Changelog 7.2.0'
- PR 603 will-moore 'Inset bugfixes'
Repository: ome/omero-fpbioimage
Updating e5b3ca3..3b6c05a
Previously merged:
- PR 30 jburel 'Build'
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Repository: ome/omero-metadata
Already up to date.
Merged PRs:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#264 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/264/)'
2024-12-01 00:45:33,691 [ scc.git] DEBUG [detached HEAD af40478] merge master -Dorg -Ssuccess-only
2024-12-01 00:45:33,691 [ scc.merge] INFO Repository: ome/omero-plugins
2024-12-01 00:45:33,691 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-12-01 00:45:33,691 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,691 [ scc.merge] INFO
2024-12-01 00:45:33,691 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,691 [ scc.merge] INFO - PR 406 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `b4102d4`'
2024-12-01 00:45:33,691 [ scc.merge] INFO - PR 407 dependabot[bot] 'Bump omero-gallery from `56f4435` to `2a621da`'
2024-12-01 00:45:33,691 [ scc.merge] INFO - PR 408 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `c0517ed`'
2024-12-01 00:45:33,691 [ scc.merge] INFO - PR 409 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `0a557da`'
2024-12-01 00:45:33,691 [ scc.merge] INFO - PR 411 dependabot[bot] 'Bump omero-figure from `24444fe` to `1dfb138`'
2024-12-01 00:45:33,691 [ scc.merge] INFO
2024-12-01 00:45:33,691 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-12-01 00:45:33,692 [ scc.merge] INFO Updating 4628e82..ca8c2ea
2024-12-01 00:45:33,692 [ scc.merge] INFO Previously merged:
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 67 jburel 'Gateway 5.10.0'
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 68 jburel 'Bump action '
2024-12-01 00:45:33,692 [ scc.merge] INFO
2024-12-01 00:45:33,692 [ scc.merge] INFO
2024-12-01 00:45:33,692 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-12-01 00:45:33,692 [ scc.merge] INFO Excluded PRs:
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-12-01 00:45:33,692 [ scc.merge] INFO Updating 027b3e6..4777ef8
2024-12-01 00:45:33,692 [ scc.merge] INFO Previously merged:
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 27 jburel 'Build'
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-12-01 00:45:33,692 [ scc.merge] INFO
2024-12-01 00:45:33,692 [ scc.merge] INFO
2024-12-01 00:45:33,692 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-12-01 00:45:33,692 [ scc.merge] INFO Excluded PRs:
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' (status: failure)
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-12-01 00:45:33,692 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,692 [ scc.merge] INFO
2024-12-01 00:45:33,692 [ scc.merge] INFO
2024-12-01 00:45:33,692 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-12-01 00:45:33,692 [ scc.merge] INFO Excluded PRs:
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-12-01 00:45:33,692 [ scc.merge] INFO Updating 9b73dd9..11d3587
2024-12-01 00:45:33,692 [ scc.merge] INFO Previously merged:
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 165 jburel 'Build'
2024-12-01 00:45:33,692 [ scc.merge] INFO
2024-12-01 00:45:33,692 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-12-01 00:45:33,692 [ scc.merge] INFO
2024-12-01 00:45:33,692 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-12-01 00:45:33,692 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-12-01 00:45:33,692 [ scc.merge] INFO
2024-12-01 00:45:33,692 [ scc.merge] INFO Repository: ome/omero-figure
2024-12-01 00:45:33,692 [ scc.merge] INFO Excluded PRs:
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier)
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-12-01 00:45:33,693 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,693 [ scc.merge] INFO
2024-12-01 00:45:33,693 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists'
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 602 will-moore 'Changelog 7.2.0'
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 603 will-moore 'Inset bugfixes'
2024-12-01 00:45:33,693 [ scc.merge] INFO
2024-12-01 00:45:33,693 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-12-01 00:45:33,693 [ scc.merge] INFO Updating e5b3ca3..3b6c05a
2024-12-01 00:45:33,693 [ scc.merge] INFO Previously merged:
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 30 jburel 'Build'
2024-12-01 00:45:33,693 [ scc.merge] INFO
2024-12-01 00:45:33,693 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-12-01 00:45:33,693 [ scc.merge] INFO
2024-12-01 00:45:33,693 [ scc.merge] INFO Repository: ome/omero-gallery
2024-12-01 00:45:33,693 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,693 [ scc.merge] INFO
2024-12-01 00:45:33,693 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2024-12-01 00:45:33,693 [ scc.merge] INFO
2024-12-01 00:45:33,693 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2024-12-01 00:45:33,693 [ scc.merge] INFO
2024-12-01 00:45:33,693 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-12-01 00:45:33,693 [ scc.merge] INFO Excluded PRs:
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-12-01 00:45:33,693 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,693 [ scc.merge] INFO
2024-12-01 00:45:33,693 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-12-01 00:45:33,693 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-12-01 00:45:33,694 [ scc.merge] INFO
2024-12-01 00:45:33,694 [ scc.merge] INFO Repository: ome/omero-mapr
2024-12-01 00:45:33,694 [ scc.merge] INFO Excluded PRs:
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-12-01 00:45:33,694 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,694 [ scc.merge] INFO
2024-12-01 00:45:33,694 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-12-01 00:45:33,694 [ scc.merge] INFO
2024-12-01 00:45:33,694 [ scc.merge] INFO Repository: ome/omero-metadata
2024-12-01 00:45:33,694 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,694 [ scc.merge] INFO
2024-12-01 00:45:33,694 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 89 jburel 'Build'
2024-12-01 00:45:33,694 [ scc.merge] INFO
2024-12-01 00:45:33,694 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-12-01 00:45:33,694 [ scc.merge] INFO
2024-12-01 00:45:33,694 [ scc.merge] INFO Repository: ome/omero-parade
2024-12-01 00:45:33,694 [ scc.merge] INFO Excluded PRs:
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-12-01 00:45:33,694 [ scc.merge] INFO Updating 5d441c2..fb5ae86
2024-12-01 00:45:33,694 [ scc.merge] INFO Previously merged:
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 133 jburel 'Build'
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-12-01 00:45:33,694 [ scc.merge] INFO
2024-12-01 00:45:33,694 [ scc.merge] INFO
2024-12-01 00:45:33,694 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-12-01 00:45:33,694 [ scc.merge] INFO Excluded PRs:
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure)
2024-12-01 00:45:33,694 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,694 [ scc.merge] INFO
2024-12-01 00:45:33,694 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,694 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO Repository: ome/omero-rois
2024-12-01 00:45:33,695 [ scc.merge] INFO Excluded PRs:
2024-12-01 00:45:33,695 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-12-01 00:45:33,695 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,695 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-12-01 00:45:33,695 [ scc.merge] INFO - PR 29 jburel 'Build'
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO Repository: ome/omero-signup
2024-12-01 00:45:33,695 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,695 [ scc.merge] INFO - PR 21 jburel 'Build'
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-01 00:45:33,695 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-12-01 00:45:33,695 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,695 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO Repository: ome/omero-upload
2024-12-01 00:45:33,695 [ scc.merge] INFO Updating aca9e9c..100f6ae
2024-12-01 00:45:33,695 [ scc.merge] INFO Previously merged:
2024-12-01 00:45:33,695 [ scc.merge] INFO - PR 13 jburel 'Build'
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-12-01 00:45:33,695 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,695 [ scc.merge] INFO - PR 20 jburel 'Build'
2024-12-01 00:45:33,695 [ scc.merge] INFO
2024-12-01 00:45:33,695 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-12-01 00:45:33,695 [ scc.merge] INFO Excluded PRs:
2024-12-01 00:45:33,695 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure)
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-12-01 00:45:33,696 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,696 [ scc.merge] INFO
2024-12-01 00:45:33,696 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-12-01 00:45:33,696 [ scc.merge] INFO
2024-12-01 00:45:33,696 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-12-01 00:45:33,696 [ scc.merge] INFO Updating adfa132..70b01ed
2024-12-01 00:45:33,696 [ scc.merge] INFO Previously merged:
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 24 jburel 'Build'
2024-12-01 00:45:33,696 [ scc.merge] INFO
2024-12-01 00:45:33,696 [ scc.merge] INFO
2024-12-01 00:45:33,696 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-12-01 00:45:33,696 [ scc.merge] INFO Updating 8da48e1..5bfef29
2024-12-01 00:45:33,696 [ scc.merge] INFO Previously merged:
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 36 jburel 'Build'
2024-12-01 00:45:33,696 [ scc.merge] INFO
2024-12-01 00:45:33,696 [ scc.merge] INFO
2024-12-01 00:45:33,696 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-12-01 00:45:33,696 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,696 [ scc.merge] INFO
2024-12-01 00:45:33,696 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-12-01 00:45:33,696 [ scc.merge] INFO
2024-12-01 00:45:33,696 [ scc.merge] INFO Repository: ome/scripts
2024-12-01 00:45:33,696 [ scc.merge] INFO Excluded PRs:
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-12-01 00:45:33,696 [ scc.merge] INFO Already up to date.
2024-12-01 00:45:33,696 [ scc.merge] INFO
2024-12-01 00:45:33,696 [ scc.merge] INFO Merged PRs:
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-12-01 00:45:33,696 [ scc.merge] INFO
2024-12-01 00:45:33,696 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-01 00:45:33,696 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-12-01 00:45:33,696 [ scc.merge] INFO
2024-12-01 00:45:33,697 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-12-01 00:45:33,697 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-12-01 00:45:33,702 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-12-01 00:45:33,707 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-12-01 00:45:33,712 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-12-01 00:45:33,717 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-12-01 00:45:33,722 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-12-01 00:45:33,727 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-12-01 00:45:33,731 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-12-01 00:45:33,736 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-12-01 00:45:33,741 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-12-01 00:45:33,746 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-12-01 00:45:33,751 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-12-01 00:45:33,756 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-12-01 00:45:33,761 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-12-01 00:45:33,765 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-12-01 00:45:33,770 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-12-01 00:45:33,775 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-12-01 00:45:33,780 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-12-01 00:45:33,785 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-12-01 00:45:33,790 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-12-01 00:45:33,795 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-12-01 00:45:33,800 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-01 00:45:33,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-12-01 00:45:33,805 [ scc.git] DEBUG Calling 'git remote'
2024-12-01 00:45:33,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: The wheel package is not available.
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WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 22ce906] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from c0517ed
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 9b73dd9
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 1dfb1389
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from e5b3ca3
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from b4102d4
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from fc20959
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from 5d441c2
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from 18bccb6
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from 5c752d5
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from c8610db
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
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Entering 'omero-virtual-microscope'
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Entering 'omero-web-zarr'
HEAD detached from 67bb245
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Entering 'omero-weberror'
HEAD detached from adfa132
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Entering 'omero-webtest'
HEAD detached from 8da48e1
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Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
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Entering 'scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
[detached HEAD 3eb7bc6] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-12-01 00:46:20,899 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-12-01 00:46:29,861 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-12-01 00:46:32,246 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-12-01 00:46:36,706 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-12-01 00:47:18,799 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/eed02e22/images/svgs/logo.svg){kind=logo}
