Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 43 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.0.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.11.0-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.4-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.1.4-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached pyjwt-2.11.0-py3-none-any.whl (28 kB) Using cached cryptography-46.0.4-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.1.4-py3-none-any.whl (152 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.1.4 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.4 future-1.0.0 idna-3.11 pycparser-3.0 pyjwt-2.11.0 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-02-05 16:09:59,521 [ scc.config] DEBUG Found github.token 2026-02-05 16:09:59,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-02-05 16:09:59,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:10:00,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:10:00,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-02-05 16:10:00,537 [ scc.gh] DEBUG 4990 remaining from 5000 (Reset at 16:02 2026-02-05 16:10:00,538 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:00,540 [ scc.git] DEBUG Check current status 2026-02-05 16:10:00,540 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:00,543 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-05 16:10:00,543 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:00,589 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-05 16:10:00,591 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-05 16:10:00,594 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-05 16:10:00,597 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-05 16:10:00,601 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-02-05 16:10:00,603 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-05 16:10:00,606 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-05 16:10:00,609 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-02-05 16:10:00,612 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-05 16:10:00,615 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-05 16:10:00,617 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-05 16:10:00,620 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-05 16:10:00,623 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-05 16:10:00,626 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-05 16:10:00,629 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-05 16:10:00,632 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-05 16:10:00,634 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-05 16:10:00,637 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-05 16:10:00,639 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-05 16:10:00,642 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-05 16:10:00,644 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-05 16:10:00,648 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-02-05 16:10:00,650 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:01,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-02-05 16:10:01,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:02,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:02,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:03,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:03,036 [ scc.git] DEBUG Resetting... 2026-02-05 16:10:03,036 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-02-05 16:10:03,044 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-05 16:10:03,044 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-02-05 16:10:03,143 [ scc.git] DEBUG Check current status 2026-02-05 16:10:03,143 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:03,145 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-05 16:10:03,146 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:03,189 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-05 16:10:03,192 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-05 16:10:03,195 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-05 16:10:03,197 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-05 16:10:03,201 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-02-05 16:10:03,204 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-05 16:10:03,207 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-05 16:10:03,210 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-02-05 16:10:03,213 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-05 16:10:03,216 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-05 16:10:03,219 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-05 16:10:03,221 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-05 16:10:03,224 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-05 16:10:03,227 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-05 16:10:03,230 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-05 16:10:03,233 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-05 16:10:03,236 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-05 16:10:03,238 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-05 16:10:03,241 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-05 16:10:03,243 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-05 16:10:03,246 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-05 16:10:03,249 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-02-05 16:10:03,250 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-02-05 16:10:03,251 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-02-05 16:10:03,251 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-02-05 16:10:03,251 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-02-05 16:10:03,251 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-02-05 16:10:03,251 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:10:03,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-02-05 16:10:04,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-02-05 16:10:04,242 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:10:04,242 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-05 16:10:04,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-02-05 16:10:04,822 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:10:04,822 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-05 16:10:05,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-02-05 16:10:05,392 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:10:05,392 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-05 16:10:05,392 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:10:05,392 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:10:05,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:10:05,394 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:10:05,397 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:10:05,397 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:10:05,399 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:10:05,403 [ scc.git] DEBUG Already up to date. 2026-02-05 16:10:05,403 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-02-05 16:10:05,682 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-05 16:10:05,683 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-02-05 16:10:05,687 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-02-05 16:10:05,944 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-05 16:10:05,944 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-02-05 16:10:05,948 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-02-05 16:10:06,200 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-05 16:10:06,200 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-02-05 16:10:06,204 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:10:06,204 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:10:06,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:10:06,207 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-05 16:10:06,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:10:06,211 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-05 16:10:06,226 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:10:06,228 [ scc.git] DEBUG scripts | 2 +- 2026-02-05 16:10:06,228 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:10:06,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:10:06,422 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-05 16:10:06,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:10:06,427 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-05 16:10:06,442 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:10:06,444 [ scc.git] DEBUG omero-figure | 2 +- 2026-02-05 16:10:06,444 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:10:06,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:10:06,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-05 16:10:06,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:10:06,846 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-05 16:10:06,860 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:10:06,863 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-02-05 16:10:06,863 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:10:07,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:10:07,273 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:10:07,334 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-02-05 16:10:07,357 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-02-05 16:10:07,371 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-02-05 16:10:07,371 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:10:07,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:10:07,374 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:10:07,449 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1030bb9250> has no local changes 2026-02-05 16:10:07,449 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:10:07,518 [ scc.git] DEBUG [detached HEAD e73a5e7] merge master -Dorg -Snone 2026-02-05 16:10:07,518 [ scc.merge] INFO Repository: ome/omero-plugins 2026-02-05 16:10:07,519 [ scc.merge] INFO Already up to date. 2026-02-05 16:10:07,519 [ scc.merge] INFO 2026-02-05 16:10:07,519 [ scc.merge] INFO Merged PRs: 2026-02-05 16:10:07,519 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-05 16:10:07,519 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-05 16:10:07,519 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-05 16:10:07,519 [ scc.merge] INFO 2026-02-05 16:10:07,519 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-02-05 16:10:07,519 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' From https://github.com/ome/omero-cli-zarr 10df940..9530c10 master -> origin/master Submodule path 'omero-cli-zarr': checked out '9530c10ba9823fcba6b39139987bf4bcd4a60179' Submodule path 'omero-figure': checked out 'b79d638b95385463319f73afc484cf4a1ee3ba13' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-02-05 16:10:14,937 [ scc.config] DEBUG Found github.token 2026-02-05 16:10:14,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-02-05 16:10:15,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:10:15,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:10:15,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-02-05 16:10:15,999 [ scc.gh] DEBUG 4976 remaining from 5000 (Reset at 16:02 2026-02-05 16:10:16,000 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:16,002 [ scc.git] DEBUG Check current status 2026-02-05 16:10:16,003 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:16,005 [ scc.git] DEBUG e73a5e7 merge master -Dorg -Snone 2026-02-05 16:10:16,005 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:16,051 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-05 16:10:16,054 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-05 16:10:16,057 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-02-05 16:10:16,060 [ scc.git] DEBUG +9530c10ba9823fcba6b39139987bf4bcd4a60179 omero-cli-zarr (v0.7.0rc1-16-g9530c10) 2026-02-05 16:10:16,063 [ scc.git] DEBUG +b79d638b95385463319f73afc484cf4a1ee3ba13 omero-figure (v7.3.1-1-gb79d638b) 2026-02-05 16:10:16,066 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-05 16:10:16,069 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-05 16:10:16,072 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-02-05 16:10:16,075 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-05 16:10:16,077 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-02-05 16:10:16,080 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-05 16:10:16,083 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-05 16:10:16,086 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-05 16:10:16,089 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-05 16:10:16,093 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-02-05 16:10:16,095 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-05 16:10:16,098 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-02-05 16:10:16,101 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-02-05 16:10:16,103 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-05 16:10:16,106 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-05 16:10:16,109 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-05 16:10:16,112 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-02-05 16:10:16,115 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:16,115 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-02-05 16:10:16,117 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-02-05 16:10:16,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-02-05 16:10:17,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:17,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:17,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:18,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:18,448 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:18,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-05 16:10:18,518 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:18,521 [ scc.git] DEBUG Check current status 2026-02-05 16:10:18,521 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:18,523 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-02-05 16:10:18,523 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:18,561 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:18,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-02-05 16:10:19,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:19,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:20,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:20,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:20,842 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:20,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:20,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-05 16:10:20,881 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:20,883 [ scc.git] DEBUG Check current status 2026-02-05 16:10:20,883 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:20,886 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-02-05 16:10:20,886 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:20,924 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:21,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-02-05 16:10:21,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:22,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:22,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:23,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:23,279 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:23,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:23,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-05 16:10:23,317 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:23,319 [ scc.git] DEBUG Check current status 2026-02-05 16:10:23,319 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:23,322 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-02-05 16:10:23,322 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:23,360 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:23,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-02-05 16:10:24,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:24,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:25,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:25,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:25,678 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:25,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:25,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-05 16:10:25,718 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:25,720 [ scc.git] DEBUG Check current status 2026-02-05 16:10:25,720 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:25,722 [ scc.git] DEBUG 9530c10 Merge pull request #192 from jburel/pixels_size 2026-02-05 16:10:25,722 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:25,760 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:26,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-02-05 16:10:26,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:27,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:27,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:28,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:28,224 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:28,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:28,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-05 16:10:28,263 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:28,265 [ scc.git] DEBUG Check current status 2026-02-05 16:10:28,265 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:28,267 [ scc.git] DEBUG b79d638b Bump version: 7.3.1 → 7.3.2.dev0 2026-02-05 16:10:28,267 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:28,306 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:28,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-02-05 16:10:29,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:29,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:30,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:30,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:30,683 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:30,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:30,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-05 16:10:30,722 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:30,724 [ scc.git] DEBUG Check current status 2026-02-05 16:10:30,725 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:30,727 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-02-05 16:10:30,727 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:30,765 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:31,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-02-05 16:10:31,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:32,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:32,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:33,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:33,100 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:33,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:33,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-05 16:10:33,138 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:33,140 [ scc.git] DEBUG Check current status 2026-02-05 16:10:33,140 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:33,142 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-02-05 16:10:33,143 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:33,182 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:33,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-02-05 16:10:34,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:34,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:35,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:35,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:35,767 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:35,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:35,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-05 16:10:35,805 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:35,807 [ scc.git] DEBUG Check current status 2026-02-05 16:10:35,807 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:35,809 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-02-05 16:10:35,809 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:35,847 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:36,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-02-05 16:10:36,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:37,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:37,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:38,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:38,278 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:38,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:38,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-05 16:10:38,316 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:38,318 [ scc.git] DEBUG Check current status 2026-02-05 16:10:38,318 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:38,321 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-02-05 16:10:38,321 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:38,358 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:38,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-02-05 16:10:39,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:39,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:40,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:40,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:40,759 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:40,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:40,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-05 16:10:40,797 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:40,799 [ scc.git] DEBUG Check current status 2026-02-05 16:10:40,799 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:40,801 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-05 16:10:40,801 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:40,839 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:41,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-02-05 16:10:41,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:42,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:42,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:43,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:43,287 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:43,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:43,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-05 16:10:43,325 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:43,327 [ scc.git] DEBUG Check current status 2026-02-05 16:10:43,327 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:43,329 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-02-05 16:10:43,329 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:43,366 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:43,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-02-05 16:10:44,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:44,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:45,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:45,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:45,751 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:45,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:45,789 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-05 16:10:45,789 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:45,790 [ scc.git] DEBUG Check current status 2026-02-05 16:10:45,791 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:45,793 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-02-05 16:10:45,793 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:45,830 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:46,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-02-05 16:10:46,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:47,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:47,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:48,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:48,197 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:48,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:48,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-05 16:10:48,235 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:48,237 [ scc.git] DEBUG Check current status 2026-02-05 16:10:48,237 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:48,239 [ scc.git] DEBUG bdfeb5e bump sphinx version 2026-02-05 16:10:48,239 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:48,277 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:48,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-02-05 16:10:49,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:49,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:50,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:50,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:50,611 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:50,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:50,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-05 16:10:50,651 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:50,653 [ scc.git] DEBUG Check current status 2026-02-05 16:10:50,653 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:50,655 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-02-05 16:10:50,655 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:50,693 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:51,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-02-05 16:10:51,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:52,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:52,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:53,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:53,130 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:53,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:53,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-05 16:10:53,168 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:53,170 [ scc.git] DEBUG Check current status 2026-02-05 16:10:53,170 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:53,173 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-02-05 16:10:53,173 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:53,211 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:53,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-05 16:10:53,619 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-05 16:10:53,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-02-05 16:10:54,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:55,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:55,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:55,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:55,979 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:56,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:56,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-05 16:10:56,018 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:56,020 [ scc.git] DEBUG Check current status 2026-02-05 16:10:56,020 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:56,022 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-02-05 16:10:56,022 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:56,060 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:56,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-02-05 16:10:57,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:57,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:10:57,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:10:58,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:10:58,305 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:10:58,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:10:58,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-05 16:10:58,343 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:10:58,345 [ scc.git] DEBUG Check current status 2026-02-05 16:10:58,345 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:10:58,347 [ scc.git] DEBUG 160d894 Fix display of code 2026-02-05 16:10:58,347 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:10:58,386 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:10:58,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-02-05 16:10:59,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:10:59,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:11:00,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:11:00,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:11:00,856 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:11:00,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:11:00,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-05 16:11:00,894 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:11:00,896 [ scc.git] DEBUG Check current status 2026-02-05 16:11:00,896 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:11:00,898 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-02-05 16:11:00,899 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:11:00,936 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:11:00,937 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-02-05 16:11:01,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-02-05 16:11:01,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:11:02,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:11:02,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:11:03,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:11:03,266 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:11:03,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:11:03,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-05 16:11:03,304 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:11:03,306 [ scc.git] DEBUG Check current status 2026-02-05 16:11:03,306 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:11:03,308 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-02-05 16:11:03,309 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:11:03,346 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:11:03,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-05 16:11:03,785 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-05 16:11:04,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-02-05 16:11:04,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:11:05,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:11:05,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:11:06,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:11:06,009 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:11:06,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:11:06,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-05 16:11:06,047 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:11:06,049 [ scc.git] DEBUG Check current status 2026-02-05 16:11:06,049 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:11:06,051 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-02-05 16:11:06,051 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:11:06,091 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:11:06,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-05 16:11:06,459 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-05 16:11:06,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-02-05 16:11:07,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:11:07,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:11:08,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:11:08,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:11:08,587 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:11:08,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:11:08,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-05 16:11:08,626 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:11:08,628 [ scc.git] DEBUG Check current status 2026-02-05 16:11:08,628 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:11:08,630 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-02-05 16:11:08,631 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:11:08,669 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:11:09,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-02-05 16:11:09,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:11:10,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:11:10,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:11:11,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:11:11,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:11:11,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:11:11,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-05 16:11:11,050 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-05 16:11:11,052 [ scc.git] DEBUG Check current status 2026-02-05 16:11:11,052 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:11:11,054 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-02-05 16:11:11,054 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:11:11,092 [ scc.config] DEBUG Found remote.origin.url 2026-02-05 16:11:11,092 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-02-05 16:11:11,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-05 16:11:11,454 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-05 16:11:11,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-02-05 16:11:12,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-05 16:11:12,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-05 16:11:13,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-05 16:11:13,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-05 16:11:13,678 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:11:13,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:11:13,718 [ scc.git] DEBUG Resetting... 2026-02-05 16:11:13,718 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-02-05 16:11:13,725 [ scc.git] DEBUG HEAD is now at e73a5e7 merge master -Dorg -Snone 2026-02-05 16:11:13,726 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-02-05 16:11:13,778 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-02-05 16:11:13,794 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-02-05 16:11:13,823 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-02-05 16:11:13,842 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-02-05 16:11:13,856 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-02-05 16:11:13,878 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-02-05 16:11:13,892 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-02-05 16:11:13,903 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-02-05 16:11:13,927 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-02-05 16:11:13,930 [ scc.git] DEBUG Check current status 2026-02-05 16:11:13,930 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-05 16:11:13,932 [ scc.git] DEBUG e73a5e7 merge master -Dorg -Snone 2026-02-05 16:11:13,932 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-05 16:11:13,975 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-05 16:11:13,977 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-05 16:11:13,980 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-05 16:11:13,983 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-05 16:11:13,986 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-02-05 16:11:13,989 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-05 16:11:13,991 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-05 16:11:13,994 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-02-05 16:11:13,997 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-05 16:11:13,999 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-05 16:11:14,002 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-05 16:11:14,005 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-05 16:11:14,008 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-05 16:11:14,010 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-05 16:11:14,013 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-05 16:11:14,016 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-05 16:11:14,018 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-05 16:11:14,021 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-05 16:11:14,023 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-05 16:11:14,026 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-05 16:11:14,029 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-05 16:11:14,032 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-02-05 16:11:14,032 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-02-05 16:11:14,033 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-02-05 16:11:14,033 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-02-05 16:11:14,033 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-02-05 16:11:14,033 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-02-05 16:11:14,033 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-02-05 16:11:14,033 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:11:14,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-02-05 16:11:14,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-02-05 16:11:14,935 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:11:15,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-02-05 16:11:16,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:11:16,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-02-05 16:11:17,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:11:17,162 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-05 16:11:17,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-02-05 16:11:17,686 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:11:18,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-02-05 16:11:18,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:11:19,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-02-05 16:11:19,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:11:19,968 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-05 16:11:20,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-02-05 16:11:20,495 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:11:21,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-02-05 16:11:21,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:11:22,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-02-05 16:11:22,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:11:22,723 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-05 16:11:22,723 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:11:22,724 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:22,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:22,726 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:11:22,728 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:11:22,728 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:11:22,731 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:11:22,734 [ scc.git] DEBUG Already up to date. 2026-02-05 16:11:22,734 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-02-05 16:11:23,008 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-05 16:11:23,008 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-02-05 16:11:23,012 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-02-05 16:11:23,353 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-05 16:11:23,353 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-02-05 16:11:23,357 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-02-05 16:11:23,620 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-05 16:11:23,620 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-02-05 16:11:23,624 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:11:23,624 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:23,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:23,626 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-05 16:11:23,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:23,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-05 16:11:23,633 [ scc.git] DEBUG Already up to date. 2026-02-05 16:11:23,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:11:23,804 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-05 16:11:23,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:23,809 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-05 16:11:23,812 [ scc.git] DEBUG Already up to date. 2026-02-05 16:11:24,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:11:24,223 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-05 16:11:24,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:24,228 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-05 16:11:24,230 [ scc.git] DEBUG Already up to date. 2026-02-05 16:11:24,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:11:24,641 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:11:24,690 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:24,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:24,693 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:11:25,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-02-05 16:11:25,088 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:11:25,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-05 16:11:25,088 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:25,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:25,091 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:11:25,094 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:11:25,094 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:11:25,096 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:11:25,099 [ scc.git] DEBUG Already up to date. 2026-02-05 16:11:25,099 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:11:25,099 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:25,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:25,101 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:11:25,140 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:25,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:25,142 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:11:25,179 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:11:25,182 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff18d26ab10> has no local changes 2026-02-05 16:11:25,182 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:11:25,187 [ scc.git] DEBUG [detached HEAD c641b5b] merge master -Dorg -Ssuccess-only 2026-02-05 16:11:25,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:11:25,188 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:11:25,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-02-05 16:11:26,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-02-05 16:11:26,416 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:11:26,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-02-05 16:11:27,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:11:28,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:11:28,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-02-05 16:11:29,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:11:29,094 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:11:29,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-02-05 16:11:30,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-02-05 16:11:30,243 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:11:30,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-05 16:11:30,243 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:30,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:30,246 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:11:30,248 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:11:30,248 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:11:30,251 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:11:30,254 [ scc.git] DEBUG Already up to date. 2026-02-05 16:11:30,254 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-02-05 16:11:30,548 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-02-05 16:11:30,548 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-02-05 16:11:30,552 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:11:30,552 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:30,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:30,555 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-02-05 16:11:30,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:30,559 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-02-05 16:11:30,566 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:11:30,568 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-05 16:11:30,568 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:11:30,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:11:30,742 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:11:30,779 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:30,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:30,781 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:11:30,817 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:11:30,820 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff18d166710> has no local changes 2026-02-05 16:11:30,820 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:11:30,826 [ scc.git] DEBUG [detached HEAD 42b9781] merge master -Dorg -Ssuccess-only 2026-02-05 16:11:30,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:11:30,826 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:11:31,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-02-05 16:11:31,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-02-05 16:11:32,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-02-05 16:11:33,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-02-05 16:11:33,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:11:34,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:11:34,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-02-05 16:11:35,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:11:35,091 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-02-05 16:11:35,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-02-05 16:11:36,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-02-05 16:11:36,238 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:11:36,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-05 16:11:36,238 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:36,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:36,241 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:11:36,243 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:11:36,243 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:11:36,246 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:11:36,254 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-02-05 16:11:37,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-02-05 16:11:37,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-02-05 16:11:38,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-02-05 16:11:39,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-02-05 16:11:39,866 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-02-05 16:11:40,159 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-02-05 16:11:40,159 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-02-05 16:11:40,163 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:11:40,163 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:40,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:40,166 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-02-05 16:11:40,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:40,171 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-02-05 16:11:40,179 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-02-05 16:11:40,180 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:11:40,183 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-02-05 16:11:40,183 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-02-05 16:11:40,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:11:40,344 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:11:40,382 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:11:40,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:11:40,384 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:11:40,420 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:11:40,423 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff18d166fd0> has no local changes 2026-02-05 16:11:40,423 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:11:40,429 [ scc.git] DEBUG [detached HEAD c2f7f65] merge master -Dorg -Ssuccess-only 2026-02-05 16:11:40,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:11:40,430 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:11:40,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-02-05 16:11:41,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-02-05 16:11:42,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-02-05 16:11:42,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-02-05 16:11:43,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-02-05 16:11:43,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-02-05 16:11:44,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-02-05 16:11:44,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-02-05 16:11:45,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:11:45,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:11:46,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-02-05 16:11:46,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2026-02-05 16:11:47,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-02-05 16:11:47,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2026-02-05 16:11:47,822 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-02-05 16:11:48,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-02-05 16:11:48,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-02-05 16:11:49,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-05 16:11:50,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:11:50,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:11:51,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-05 16:11:51,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-02-05 16:11:52,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-05 16:11:52,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-02-05 16:11:52,704 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-02-05 16:11:53,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2026-02-05 16:11:53,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2026-02-05 16:11:54,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/5aed4047c49e1cc8e8036045b09d3102237c0c30 HTTP/1.1" 200 None 2026-02-05 16:11:54,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/5aed4047c49e1cc8e8036045b09d3102237c0c30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:11:55,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/5aed4047c49e1cc8e8036045b09d3102237c0c30/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:11:56,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-02-05 16:11:56,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2026-02-05 16:11:57,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-02-05 16:11:57,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-02-05 16:11:58,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-02-05 16:11:58,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-02-05 16:11:59,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-02-05 16:11:59,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-02-05 16:12:00,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-02-05 16:12:00,237 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:12:00,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-05 16:12:00,237 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:12:00,237 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:12:00,240 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:12:00,242 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:12:00,242 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:12:00,245 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:12:00,257 [ scc.git] DEBUG Updating 11d3587..9530c10 2026-02-05 16:12:00,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-02-05 16:12:01,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-02-05 16:12:02,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-02-05 16:12:03,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-02-05 16:12:04,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-02-05 16:12:04,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-02-05 16:12:05,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-02-05 16:12:06,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-02-05 16:12:07,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-02-05 16:12:08,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-02-05 16:12:09,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-02-05 16:12:09,146 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-02-05 16:12:09,746 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-05 16:12:09,746 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-02-05 16:12:09,751 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-02-05 16:12:10,007 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-05 16:12:10,007 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-02-05 16:12:10,012 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:12:10,012 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:12:10,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:12:10,014 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-05 16:12:10,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:12:10,020 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-05 16:12:10,029 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:12:10,033 [ scc.git] DEBUG README.rst | 14 ++ 2026-02-05 16:12:10,033 [ scc.git] DEBUG src/omero_zarr/cli.py | 66 +++++---- 2026-02-05 16:12:10,033 [ scc.git] DEBUG src/omero_zarr/kvp_tables.py | 82 +++++++++++ 2026-02-05 16:12:10,033 [ scc.git] DEBUG src/omero_zarr/masks.py | 46 ++++-- 2026-02-05 16:12:10,033 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 51 +++++-- 2026-02-05 16:12:10,033 [ scc.git] DEBUG src/omero_zarr/util.py | 49 ++++++- 2026-02-05 16:12:10,033 [ scc.git] DEBUG test/integration/clitest/test_export.py | 251 +++++++++++++++++++++++--------- 2026-02-05 16:12:10,033 [ scc.git] DEBUG 7 files changed, 443 insertions(+), 116 deletions(-) 2026-02-05 16:12:10,033 [ scc.git] DEBUG create mode 100644 src/omero_zarr/kvp_tables.py 2026-02-05 16:12:10,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:12:10,191 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-02-05 16:12:10,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:12:10,197 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-02-05 16:12:10,208 [ scc.git] DEBUG CONFLICT (modify/delete): CHANGELOG.md deleted in HEAD and modified in bb180dbb97ddc67cd2cf655d56058ba7da765769. Version bb180dbb97ddc67cd2cf655d56058ba7da765769 of CHANGELOG.md left in tree. 2026-02-05 16:12:10,208 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-02-05 16:12:10,209 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-02-05 16:12:10,209 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-02-05 16:12:10,209 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-02-05 16:12:10,209 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:12:10,209 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:12:10,212 [ scc.git] DEBUG Calling 'git reset --hard c0f1920af744d84a6b2d8a1b97a52c103cabb520' 2026-02-05 16:12:10,216 [ scc.git] DEBUG HEAD is now at c0f1920 merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) 2026-02-05 16:12:10,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:12:10,609 [ scc.git] DEBUG Calling 'git merge-base 9530c10ba9823fcba6b39139987bf4bcd4a60179 bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-02-05 16:12:10,612 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..9530c10ba9823fcba6b39139987bf4bcd4a60179' 2026-02-05 16:12:10,615 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - CHANGELOG.md --conflicts 2026-02-05 16:12:10,617 [ scc.config] DEBUG Found github.token 2026-02-05 16:12:10,617 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-02-05 16:12:10,617 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:12:10,654 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:12:10,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:12:10,657 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:12:10,695 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:12:10,699 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff18d14dd10> has no local changes 2026-02-05 16:12:10,699 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 182 will-moore 'Revert "Remove support for Plate import"' (exclude comment) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9530c10 Previously merged: - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:12:10,706 [ scc.git] DEBUG [detached HEAD 76170ac] merge master -Dorg -Ssuccess-only 2026-02-05 16:12:10,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:12:10,706 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:12:11,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-02-05 16:12:11,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666 HTTP/1.1" 200 None 2026-02-05 16:12:12,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/665 HTTP/1.1" 200 None 2026-02-05 16:12:12,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/665/comments HTTP/1.1" 200 None 2026-02-05 16:12:13,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b HTTP/1.1" 200 None 2026-02-05 16:12:13,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:12:14,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:12:14,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b HTTP/1.1" 200 None 2026-02-05 16:12:15,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bdf45b550f4528d17eba292491bbb620ad49022b?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:12:15,433 [ scc.repo] DEBUG - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-02-05 16:12:15,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664 HTTP/1.1" 200 None 2026-02-05 16:12:16,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664/comments HTTP/1.1" 200 None 2026-02-05 16:12:16,478 [ scc.repo] DEBUG # ... Include label: include 2026-02-05 16:12:17,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea HTTP/1.1" 200 None 2026-02-05 16:12:17,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:12:18,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:12:18,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea HTTP/1.1" 200 None 2026-02-05 16:12:19,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ef2d52de60235379f42877477aa2088551610bea?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:12:19,092 [ scc.repo] DEBUG - PR 664 Nirkan 'Handle many channels ' 2026-02-05 16:12:19,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663 HTTP/1.1" 200 None 2026-02-05 16:12:20,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663/comments HTTP/1.1" 200 None 2026-02-05 16:12:20,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1a0bf21adfbde776ff98e417c816b68e3137f4c3 HTTP/1.1" 200 None 2026-02-05 16:12:21,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1a0bf21adfbde776ff98e417c816b68e3137f4c3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:12:21,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1a0bf21adfbde776ff98e417c816b68e3137f4c3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:12:22,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1a0bf21adfbde776ff98e417c816b68e3137f4c3 HTTP/1.1" 200 None 2026-02-05 16:12:23,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/1a0bf21adfbde776ff98e417c816b68e3137f4c3?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:12:23,065 [ scc.repo] DEBUG - PR 663 will-moore 'Zarr' 2026-02-05 16:12:23,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None 2026-02-05 16:12:24,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662/comments HTTP/1.1" 200 None 2026-02-05 16:12:24,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac HTTP/1.1" 200 None 2026-02-05 16:12:25,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:12:25,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:12:26,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac HTTP/1.1" 200 None 2026-02-05 16:12:27,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/21baa4e8ba004395bd7a27d520edaa2ed4a540ac?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:12:27,083 [ scc.repo] DEBUG - PR 662 will-moore 'Export script runnable without OMERO' 2026-02-05 16:12:27,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656 HTTP/1.1" 200 None 2026-02-05 16:12:28,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656/comments HTTP/1.1" 200 None 2026-02-05 16:12:28,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d HTTP/1.1" 200 None 2026-02-05 16:12:29,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:12:29,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:12:30,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d HTTP/1.1" 200 None 2026-02-05 16:12:30,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c7d0108c6df89255b8875924ed52e264a72e581d?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:12:30,755 [ scc.repo] DEBUG - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-02-05 16:12:31,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654 HTTP/1.1" 200 None 2026-02-05 16:12:31,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654/comments HTTP/1.1" 200 None 2026-02-05 16:12:32,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83 HTTP/1.1" 200 None 2026-02-05 16:12:32,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:12:33,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:12:34,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83 HTTP/1.1" 200 None 2026-02-05 16:12:34,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/54c30d85fccf5d11463886b86af374471c3d6c83?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:12:34,517 [ scc.repo] DEBUG - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-02-05 16:12:35,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-02-05 16:12:35,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-02-05 16:12:35,658 [ scc.repo] DEBUG # ... Include label: include 2026-02-05 16:12:36,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-02-05 16:12:36,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:12:37,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:12:37,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-02-05 16:12:38,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:12:38,237 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-02-05 16:12:38,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648 HTTP/1.1" 200 None 2026-02-05 16:12:39,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/648/comments HTTP/1.1" 200 None 2026-02-05 16:12:39,310 [ scc.repo] DEBUG # ... Include label: include 2026-02-05 16:12:39,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cbeb405db7ba46e88e1c02bba654c03f50421695 HTTP/1.1" 200 None 2026-02-05 16:12:40,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cbeb405db7ba46e88e1c02bba654c03f50421695/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:12:40,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cbeb405db7ba46e88e1c02bba654c03f50421695/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:12:41,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cbeb405db7ba46e88e1c02bba654c03f50421695 HTTP/1.1" 200 None 2026-02-05 16:12:41,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cbeb405db7ba46e88e1c02bba654c03f50421695?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:12:41,932 [ scc.repo] DEBUG - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-02-05 16:12:42,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-02-05 16:12:43,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-02-05 16:12:43,137 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:12:43,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-05 16:12:43,137 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:12:43,137 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:12:43,140 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:12:43,143 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:12:43,143 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:12:43,146 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:12:43,181 [ scc.git] DEBUG Updating 9cc36cde..b79d638b 2026-02-05 16:12:43,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-02-05 16:12:44,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-02-05 16:12:45,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-02-05 16:12:46,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-02-05 16:12:47,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-02-05 16:12:48,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-02-05 16:12:49,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-02-05 16:12:49,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-02-05 16:12:50,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-02-05 16:12:51,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-02-05 16:12:52,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-02-05 16:12:52,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-02-05 16:12:53,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-02-05 16:12:54,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-02-05 16:12:55,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-02-05 16:12:56,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-02-05 16:12:57,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-02-05 16:12:57,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-02-05 16:12:58,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-02-05 16:12:59,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-02-05 16:13:00,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-02-05 16:13:00,251 [ scc.git] DEBUG Calling 'git fetch origin pull/648/head' 2026-02-05 16:13:00,775 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-05 16:13:00,775 [ scc.git] DEBUG * branch refs/pull/648/head -> FETCH_HEAD 2026-02-05 16:13:00,778 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-02-05 16:13:01,054 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-05 16:13:01,054 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-02-05 16:13:01,058 [ scc.git] DEBUG Calling 'git fetch origin pull/654/head' 2026-02-05 16:13:01,317 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-05 16:13:01,317 [ scc.git] DEBUG * branch refs/pull/654/head -> FETCH_HEAD 2026-02-05 16:13:01,321 [ scc.git] DEBUG Calling 'git fetch origin pull/656/head' 2026-02-05 16:13:01,587 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-05 16:13:01,587 [ scc.git] DEBUG * branch refs/pull/656/head -> FETCH_HEAD 2026-02-05 16:13:01,591 [ scc.git] DEBUG Calling 'git fetch origin pull/662/head' 2026-02-05 16:13:01,864 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-05 16:13:01,864 [ scc.git] DEBUG * branch refs/pull/662/head -> FETCH_HEAD 2026-02-05 16:13:01,868 [ scc.git] DEBUG Calling 'git fetch origin pull/663/head' 2026-02-05 16:13:02,143 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-05 16:13:02,143 [ scc.git] DEBUG * branch refs/pull/663/head -> FETCH_HEAD 2026-02-05 16:13:02,147 [ scc.git] DEBUG Calling 'git fetch origin pull/664/head' 2026-02-05 16:13:02,410 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-05 16:13:02,411 [ scc.git] DEBUG * branch refs/pull/664/head -> FETCH_HEAD 2026-02-05 16:13:02,415 [ scc.git] DEBUG Calling 'git fetch origin pull/665/head' 2026-02-05 16:13:02,683 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-05 16:13:02,683 [ scc.git] DEBUG * branch refs/pull/665/head -> FETCH_HEAD 2026-02-05 16:13:02,687 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:13:02,688 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:13:02,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:02,690 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cbeb405db7ba46e88e1c02bba654c03f50421695' 2026-02-05 16:13:02,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:02,699 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 648 (Add well and field label for high-content screening data, fixes #540) cbeb405db7ba46e88e1c02bba654c03f50421695' 2026-02-05 16:13:03,113 [ scc.git] DEBUG Auto-merging docs/figure_file_format.rst 2026-02-05 16:13:03,113 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-05 16:13:03,113 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-05 16:13:03,113 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-05 16:13:03,113 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-05 16:13:03,113 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-05 16:13:03,113 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-02-05 16:13:03,114 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:03,121 [ scc.git] DEBUG docs/figure_file_format.rst | 39 ++++++++++++++++++++++ 2026-02-05 16:13:03,121 [ scc.git] DEBUG omero_figure/omeroutils.py | 32 ++++++++++++++++++ 2026-02-05 16:13:03,121 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 38 +++++++++++++++------ 2026-02-05 16:13:03,121 [ scc.git] DEBUG omero_figure/views.py | 24 ++++++++++++- 2026-02-05 16:13:03,121 [ scc.git] DEBUG src/index.html | 20 +++++++++++ 2026-02-05 16:13:03,122 [ scc.git] DEBUG src/js/models/figure_model.js | 1 + 2026-02-05 16:13:03,122 [ scc.git] DEBUG src/js/models/panel_model.js | 11 +++--- 2026-02-05 16:13:03,122 [ scc.git] DEBUG src/js/views/modal_views.js | 1 + 2026-02-05 16:13:03,122 [ scc.git] DEBUG src/js/views/panel_view.js | 34 +++++++++++++++---- 2026-02-05 16:13:03,122 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 1 + 2026-02-05 16:13:03,122 [ scc.git] DEBUG 10 files changed, 177 insertions(+), 24 deletions(-) 2026-02-05 16:13:03,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:03,281 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-02-05 16:13:03,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:03,291 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-02-05 16:13:03,482 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-05 16:13:03,482 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-05 16:13:03,482 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-05 16:13:03,483 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:03,489 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-02-05 16:13:03,489 [ scc.git] DEBUG src/index.html | 11 ++ 2026-02-05 16:13:03,489 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-02-05 16:13:03,489 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-02-05 16:13:03,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:03,681 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54c30d85fccf5d11463886b86af374471c3d6c83' 2026-02-05 16:13:03,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:03,690 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 654 (Refresh metadata button to reload channel names, pixel sizes) 54c30d85fccf5d11463886b86af374471c3d6c83' 2026-02-05 16:13:03,852 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-05 16:13:03,852 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-05 16:13:03,852 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-05 16:13:03,852 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-05 16:13:03,853 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:03,858 [ scc.git] DEBUG src/index.html | 5 +++ 2026-02-05 16:13:03,858 [ scc.git] DEBUG src/js/models/figure_model.js | 92 +++++++++++++++++++++++++++++++++++++++++++ 2026-02-05 16:13:03,858 [ scc.git] DEBUG src/js/models/panel_model.js | 33 ++++++++++++---- 2026-02-05 16:13:03,858 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++++ 2026-02-05 16:13:03,858 [ scc.git] DEBUG 4 files changed, 130 insertions(+), 7 deletions(-) 2026-02-05 16:13:04,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:04,110 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c7d0108c6df89255b8875924ed52e264a72e581d' 2026-02-05 16:13:04,116 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:04,118 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 656 (Option to add roi comment when adding ROI from OMERO) c7d0108c6df89255b8875924ed52e264a72e581d' 2026-02-05 16:13:04,132 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2026-02-05 16:13:04,133 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:04,137 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 3 +- 2026-02-05 16:13:04,137 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 68 +++++++++++++++++------- 2026-02-05 16:13:04,137 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 7 ++- 2026-02-05 16:13:04,137 [ scc.git] DEBUG 3 files changed, 56 insertions(+), 22 deletions(-) 2026-02-05 16:13:04,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:04,525 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...21baa4e8ba004395bd7a27d520edaa2ed4a540ac' 2026-02-05 16:13:04,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:04,532 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 662 (Export script runnable without OMERO) 21baa4e8ba004395bd7a27d520edaa2ed4a540ac' 2026-02-05 16:13:04,561 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-05 16:13:04,561 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:04,566 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 594 +++++++++++++++------ 2026-02-05 16:13:04,566 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pbm | Bin 0 -> 8441 bytes 2026-02-05 16:13:04,566 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pil | Bin 0 -> 5143 bytes 2026-02-05 16:13:04,566 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSans.ttf | Bin 0 -> 568896 bytes 2026-02-05 16:13:04,566 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSansBold.ttf | Bin 0 -> 359272 bytes 2026-02-05 16:13:04,566 [ scc.git] DEBUG .../pilfonts/FreeSansBoldOblique.ttf | Bin 0 -> 301188 bytes 2026-02-05 16:13:04,567 [ scc.git] DEBUG .../figure_scripts/pilfonts/FreeSansOblique.ttf | Bin 0 -> 441432 bytes 2026-02-05 16:13:04,567 [ scc.git] DEBUG 7 files changed, 434 insertions(+), 160 deletions(-) 2026-02-05 16:13:04,567 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pbm 2026-02-05 16:13:04,567 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pil 2026-02-05 16:13:04,567 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSans.ttf 2026-02-05 16:13:04,567 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBold.ttf 2026-02-05 16:13:04,567 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBoldOblique.ttf 2026-02-05 16:13:04,567 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansOblique.ttf 2026-02-05 16:13:04,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:04,932 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a0bf21adfbde776ff98e417c816b68e3137f4c3' 2026-02-05 16:13:04,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:04,940 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 1a0bf21adfbde776ff98e417c816b68e3137f4c3' 2026-02-05 16:13:05,151 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-05 16:13:05,151 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-05 16:13:05,151 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-05 16:13:05,151 [ scc.git] DEBUG Auto-merging src/js/views/modal_views.js 2026-02-05 16:13:05,151 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-02-05 16:13:05,152 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:05,159 [ scc.git] DEBUG omero_figure/views.py | 11 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG package-lock.json | 72 +++- 2026-02-05 16:13:05,160 [ scc.git] DEBUG package.json | 4 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/models/figure_model.js | 104 ++++- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/models/panel_model.js | 36 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/models/zarr_utils.js | 473 +++++++++++++++++++++ 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 3 + 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/views/chgrp_modal_view.js | 10 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/views/crop_modal_view.js | 12 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/views/info_panel_view.js | 37 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 10 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/views/lutpicker.js | 2 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/views/modal_views.js | 33 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/views/panel_view.js | 9 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/views/right_panel_view.js | 11 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 49 +-- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/js/views/util.js | 48 ++- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/templates/figure_panel.template.html | 2 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/templates/info_panel.template.html | 7 + 2026-02-05 16:13:05,160 [ scc.git] DEBUG .../modal_dialogs/crop_modal_roi.template.html | 3 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/templates/viewport_inner.template.html | 3 +- 2026-02-05 16:13:05,160 [ scc.git] DEBUG src/test.html | 25 ++ 2026-02-05 16:13:05,160 [ scc.git] DEBUG 22 files changed, 822 insertions(+), 142 deletions(-) 2026-02-05 16:13:05,160 [ scc.git] DEBUG create mode 100644 src/js/models/zarr_utils.js 2026-02-05 16:13:05,160 [ scc.git] DEBUG create mode 100644 src/test.html 2026-02-05 16:13:05,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:05,350 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ef2d52de60235379f42877477aa2088551610bea' 2026-02-05 16:13:05,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:05,357 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 664 (Handle many channels ) ef2d52de60235379f42877477aa2088551610bea' 2026-02-05 16:13:05,381 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-05 16:13:05,381 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-05 16:13:05,381 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-05 16:13:05,381 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js 2026-02-05 16:13:05,381 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:13:05,381 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:13:05,386 [ scc.git] DEBUG Calling 'git reset --hard 165a873728de2b78d90b5b06216b936f15eec058' 2026-02-05 16:13:05,396 [ scc.git] DEBUG HEAD is now at 165a8737 merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 2026-02-05 16:13:05,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:05,790 [ scc.git] DEBUG Calling 'git merge-base b79d638b95385463319f73afc484cf4a1ee3ba13 ef2d52de60235379f42877477aa2088551610bea' 2026-02-05 16:13:05,793 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..b79d638b95385463319f73afc484cf4a1ee3ba13' 2026-02-05 16:13:05,796 [ scc.git] INFO - PR 664 Nirkan 'Handle many channels ' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #648 kaabl 'Add well and field label for high-content screening data, fixes #540' - src/js/models/panel_model.js - PR #654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - src/js/models/panel_model.js - PR #663 will-moore 'Zarr' - src/js/models/panel_model.js --conflicts 2026-02-05 16:13:05,798 [ scc.config] DEBUG Found github.token 2026-02-05 16:13:05,798 [ scc.git] DEBUG Not adding comment to issue #664, already --conflicts. 2026-02-05 16:13:05,798 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-05 16:13:05,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:05,806 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 665 (Ensure projection parameters are within bounds in loadJSON and setID) bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-05 16:13:05,828 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-05 16:13:05,828 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/figure_model.js 2026-02-05 16:13:05,828 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-05 16:13:05,828 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js 2026-02-05 16:13:05,828 [ scc.git] DEBUG Auto-merging src/js/views/util.js 2026-02-05 16:13:05,828 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:13:05,828 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:13:05,833 [ scc.git] DEBUG Calling 'git reset --hard 165a873728de2b78d90b5b06216b936f15eec058' 2026-02-05 16:13:05,842 [ scc.git] DEBUG HEAD is now at 165a8737 merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 2026-02-05 16:13:06,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:06,197 [ scc.git] DEBUG Calling 'git merge-base b79d638b95385463319f73afc484cf4a1ee3ba13 bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-05 16:13:06,201 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..b79d638b95385463319f73afc484cf4a1ee3ba13' 2026-02-05 16:13:06,204 [ scc.git] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #648 kaabl 'Add well and field label for high-content screening data, fixes #540' - src/js/models/panel_model.js - src/js/models/figure_model.js - PR #654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - src/js/models/panel_model.js - src/js/models/figure_model.js - PR #663 will-moore 'Zarr' - src/js/models/panel_model.js - src/js/models/figure_model.js - PR #664 Nirkan 'Handle many channels ' - src/js/models/panel_model.js --conflicts 2026-02-05 16:13:06,206 [ scc.config] DEBUG Found github.token 2026-02-05 16:13:06,206 [ scc.git] DEBUG Not adding comment to issue #665, already --conflicts. 2026-02-05 16:13:06,206 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:13:06,246 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:13:06,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:06,248 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:13:06,286 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:13:06,293 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff18d0d1790> has no local changes 2026-02-05 16:13:06,293 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 666 will-moore 'Standalone app' (stage: draft) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..b79d638b Previously merged: - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 662 will-moore 'Export script runnable without OMERO' - PR 663 will-moore 'Zarr' Conflicting PRs (not included): - PR 664 Nirkan 'Handle many channels ' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:13:06,300 [ scc.git] DEBUG [detached HEAD 0502a814] merge master -Dorg -Ssuccess-only 2026-02-05 16:13:06,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:13:06,300 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:13:06,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-02-05 16:13:07,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-02-05 16:13:07,346 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:13:08,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-02-05 16:13:08,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:09,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:13:09,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-02-05 16:13:10,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:10,414 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:13:10,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-02-05 16:13:11,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-02-05 16:13:12,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-02-05 16:13:12,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:13,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-02-05 16:13:13,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:13,560 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-02-05 16:13:13,560 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:13:13,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-05 16:13:13,560 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:13:13,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:13,562 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:13:13,565 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:13:13,565 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:13:13,567 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:13:13,571 [ scc.git] DEBUG Already up to date. 2026-02-05 16:13:13,571 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-02-05 16:13:13,845 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-02-05 16:13:13,845 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-02-05 16:13:13,848 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-02-05 16:13:14,102 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-02-05 16:13:14,102 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-02-05 16:13:14,105 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:13:14,105 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:13:14,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:14,108 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-02-05 16:13:14,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:14,113 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-02-05 16:13:14,119 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-02-05 16:13:14,120 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:14,123 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-02-05 16:13:14,123 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-02-05 16:13:14,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:14,276 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-02-05 16:13:14,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:14,282 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-02-05 16:13:14,289 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:14,292 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-05 16:13:14,292 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:13:14,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:14,671 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:13:14,710 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:13:14,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:14,712 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:13:14,750 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:13:14,753 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff18d0e0d50> has no local changes 2026-02-05 16:13:14,753 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:13:14,759 [ scc.git] DEBUG [detached HEAD 4b919f6] merge master -Dorg -Ssuccess-only 2026-02-05 16:13:14,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:13:14,759 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:13:15,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-02-05 16:13:15,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-02-05 16:13:16,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-02-05 16:13:17,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-02-05 16:13:17,028 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:13:17,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-02-05 16:13:18,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:18,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:13:19,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-02-05 16:13:19,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:19,835 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-02-05 16:13:20,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-02-05 16:13:20,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-02-05 16:13:21,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-02-05 16:13:21,514 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:13:22,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-02-05 16:13:22,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:23,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-02-05 16:13:23,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:23,619 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-02-05 16:13:24,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-02-05 16:13:24,124 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:13:24,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-02-05 16:13:25,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:25,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-02-05 16:13:26,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:26,096 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-02-05 16:13:26,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-02-05 16:13:26,616 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:13:27,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-02-05 16:13:27,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:28,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-02-05 16:13:28,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:28,721 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-02-05 16:13:29,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-02-05 16:13:29,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-02-05 16:13:29,781 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:13:30,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-02-05 16:13:30,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:31,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-02-05 16:13:31,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:31,908 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-02-05 16:13:32,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-02-05 16:13:32,428 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:13:33,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-02-05 16:13:33,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:34,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-02-05 16:13:34,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:34,525 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-02-05 16:13:35,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-02-05 16:13:35,055 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:13:35,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-02-05 16:13:36,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:36,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-02-05 16:13:37,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:37,222 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-02-05 16:13:37,222 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:13:37,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-05 16:13:37,223 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:13:37,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:37,225 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:13:37,228 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:13:37,228 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:13:37,230 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:13:37,233 [ scc.git] DEBUG Already up to date. 2026-02-05 16:13:37,233 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-02-05 16:13:37,524 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-05 16:13:37,524 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-02-05 16:13:37,529 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-02-05 16:13:37,994 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-05 16:13:37,994 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-02-05 16:13:37,999 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-02-05 16:13:38,268 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-05 16:13:38,268 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-02-05 16:13:38,272 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-02-05 16:13:38,643 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-05 16:13:38,643 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-02-05 16:13:38,647 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-02-05 16:13:38,906 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-05 16:13:38,906 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-02-05 16:13:38,910 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-02-05 16:13:39,176 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-05 16:13:39,176 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-02-05 16:13:39,180 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-02-05 16:13:39,441 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-05 16:13:39,441 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-02-05 16:13:39,445 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:13:39,445 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:13:39,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:39,447 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-02-05 16:13:39,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:39,452 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-02-05 16:13:39,461 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:39,465 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-02-05 16:13:39,465 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-02-05 16:13:39,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:39,656 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-02-05 16:13:39,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:39,661 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-02-05 16:13:39,675 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-05 16:13:39,676 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:39,680 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-02-05 16:13:39,680 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-02-05 16:13:40,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:40,083 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-05 16:13:40,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:40,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-05 16:13:40,102 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-05 16:13:40,102 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-05 16:13:40,102 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:13:40,103 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:13:40,105 [ scc.git] DEBUG Calling 'git reset --hard d1f76692d0d251b8fb2b2710247812fa2bf24a1c' 2026-02-05 16:13:40,109 [ scc.git] DEBUG HEAD is now at d1f7669 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-02-05 16:13:40,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:40,504 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-05 16:13:40,506 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-05 16:13:40,509 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-02-05 16:13:40,511 [ scc.config] DEBUG Found github.token 2026-02-05 16:13:40,511 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-02-05 16:13:40,511 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-02-05 16:13:40,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:40,515 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-02-05 16:13:40,530 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-05 16:13:40,531 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:40,535 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-02-05 16:13:40,535 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-02-05 16:13:40,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:40,921 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-02-05 16:13:40,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:40,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-02-05 16:13:40,942 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-05 16:13:40,942 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:13:40,947 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-02-05 16:13:40,947 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-02-05 16:13:41,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:41,341 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-05 16:13:41,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:41,346 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-05 16:13:41,360 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-05 16:13:41,360 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-05 16:13:41,361 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:13:41,361 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:13:41,363 [ scc.git] DEBUG Calling 'git reset --hard 3d8665c6af45e4c327e24cf5c519e0d6ed283e9c' 2026-02-05 16:13:41,368 [ scc.git] DEBUG HEAD is now at 3d8665c merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-02-05 16:13:41,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:41,753 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-05 16:13:41,756 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-05 16:13:41,758 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-02-05 16:13:41,760 [ scc.config] DEBUG Found github.token 2026-02-05 16:13:41,761 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-02-05 16:13:41,761 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-05 16:13:41,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:41,765 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-05 16:13:41,783 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-05 16:13:41,783 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-05 16:13:41,784 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:13:41,784 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:13:41,786 [ scc.git] DEBUG Calling 'git reset --hard 3d8665c6af45e4c327e24cf5c519e0d6ed283e9c' 2026-02-05 16:13:41,791 [ scc.git] DEBUG HEAD is now at 3d8665c merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-02-05 16:13:42,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:13:42,164 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-05 16:13:42,167 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-05 16:13:42,169 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-02-05 16:13:42,171 [ scc.config] DEBUG Found github.token 2026-02-05 16:13:42,171 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-02-05 16:13:42,172 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:13:42,210 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:13:42,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:13:42,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:13:42,250 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:13:42,255 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff18d0da7d0> has no local changes 2026-02-05 16:13:42,255 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:13:42,261 [ scc.git] DEBUG [detached HEAD 9e77a63] merge master -Dorg -Ssuccess-only 2026-02-05 16:13:42,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:13:42,261 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:13:42,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-02-05 16:13:43,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-02-05 16:13:44,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-02-05 16:13:44,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:45,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:13:45,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-02-05 16:13:46,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:46,049 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-02-05 16:13:46,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-02-05 16:13:47,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-02-05 16:13:47,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:48,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:13:48,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-02-05 16:13:49,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:49,221 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-02-05 16:13:49,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-02-05 16:13:50,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-02-05 16:13:50,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-02-05 16:13:51,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-02-05 16:13:51,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2026-02-05 16:13:52,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2026-02-05 16:13:52,363 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:13:52,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-02-05 16:13:53,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:54,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:13:54,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-02-05 16:13:55,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:55,256 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-02-05 16:13:55,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2026-02-05 16:13:55,799 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:13:56,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-02-05 16:13:56,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:13:57,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:13:58,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-02-05 16:13:58,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:13:58,622 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-02-05 16:13:59,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-02-05 16:13:59,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-02-05 16:14:00,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-02-05 16:14:00,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-02-05 16:14:01,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-02-05 16:14:01,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:03,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-02-05 16:14:04,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:04,035 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-02-05 16:14:04,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-02-05 16:14:05,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-02-05 16:14:05,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-02-05 16:14:06,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:06,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-02-05 16:14:07,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:07,257 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-02-05 16:14:07,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-02-05 16:14:08,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-02-05 16:14:08,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-02-05 16:14:09,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:09,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-02-05 16:14:10,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:10,475 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-02-05 16:14:10,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-02-05 16:14:11,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-02-05 16:14:12,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-02-05 16:14:12,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:13,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:14:13,148 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:14:13,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-05 16:14:13,148 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:14:13,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:13,151 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:14:13,153 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:14:13,153 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:14:13,156 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:14:13,163 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-02-05 16:14:13,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-02-05 16:14:14,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-02-05 16:14:14,753 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-02-05 16:14:15,066 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-05 16:14:15,066 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-02-05 16:14:15,070 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-02-05 16:14:15,333 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-05 16:14:15,333 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-02-05 16:14:15,338 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-02-05 16:14:15,601 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-05 16:14:15,601 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-02-05 16:14:15,604 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2026-02-05 16:14:15,861 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-05 16:14:15,861 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2026-02-05 16:14:15,865 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2026-02-05 16:14:16,123 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-05 16:14:16,123 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2026-02-05 16:14:16,126 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-02-05 16:14:16,387 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-05 16:14:16,387 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-02-05 16:14:16,391 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-02-05 16:14:16,645 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-05 16:14:16,645 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-02-05 16:14:16,649 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:14:16,649 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:14:16,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:16,651 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-02-05 16:14:16,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:16,657 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-02-05 16:14:16,667 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-02-05 16:14:16,667 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-02-05 16:14:16,668 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:14:16,672 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-02-05 16:14:16,672 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-02-05 16:14:16,672 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-02-05 16:14:16,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:16,846 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-02-05 16:14:16,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:16,853 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-02-05 16:14:16,869 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-02-05 16:14:16,869 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-02-05 16:14:16,869 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-02-05 16:14:16,869 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-02-05 16:14:16,870 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:14:16,874 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-02-05 16:14:16,874 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-02-05 16:14:16,874 [ scc.git] DEBUG src/app/header.html | 5 + 2026-02-05 16:14:16,874 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-02-05 16:14:16,874 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-02-05 16:14:16,874 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-02-05 16:14:16,874 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-02-05 16:14:16,874 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-02-05 16:14:17,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:17,299 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-02-05 16:14:17,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:17,305 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-02-05 16:14:17,315 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-02-05 16:14:17,316 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:14:17,319 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-02-05 16:14:17,319 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-02-05 16:14:17,319 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-02-05 16:14:17,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:17,749 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-02-05 16:14:17,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:17,755 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-02-05 16:14:17,772 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:14:17,780 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2026-02-05 16:14:17,780 [ scc.git] DEBUG package.json | 2 +- 2026-02-05 16:14:17,780 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2026-02-05 16:14:18,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:18,172 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-05 16:14:18,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:18,178 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-05 16:14:18,210 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-05 16:14:18,210 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-05 16:14:18,211 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:14:18,211 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:14:18,214 [ scc.git] DEBUG Calling 'git reset --hard 67d2b058806fe6305b17bacb21486697d1fdfbb9' 2026-02-05 16:14:18,224 [ scc.git] DEBUG HEAD is now at 67d2b05 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2026-02-05 16:14:18,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:18,619 [ scc.git] DEBUG Calling 'git merge-base 5e2de43ad401fb00690a79644056e0ac15fabfd5 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-05 16:14:18,622 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..5e2de43ad401fb00690a79644056e0ac15fabfd5' 2026-02-05 16:14:18,624 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2026-02-05 16:14:18,627 [ scc.config] DEBUG Found github.token 2026-02-05 16:14:18,627 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2026-02-05 16:14:18,627 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-02-05 16:14:18,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:18,633 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-02-05 16:14:18,646 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:14:18,649 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-02-05 16:14:18,649 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-02-05 16:14:18,649 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-02-05 16:14:18,649 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-02-05 16:14:19,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:19,035 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-02-05 16:14:19,039 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:19,041 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-02-05 16:14:19,053 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-02-05 16:14:19,054 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:14:19,057 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-02-05 16:14:19,057 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-02-05 16:14:19,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:19,433 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:14:19,471 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:14:19,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:19,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:14:19,511 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:14:19,515 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff18d18a2d0> has no local changes 2026-02-05 16:14:19,515 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:14:19,521 [ scc.git] DEBUG [detached HEAD d5b0592] merge master -Dorg -Ssuccess-only 2026-02-05 16:14:19,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:14:19,522 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:14:20,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-02-05 16:14:20,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-02-05 16:14:21,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-02-05 16:14:21,134 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:14:21,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-02-05 16:14:22,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:22,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:14:23,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-02-05 16:14:23,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:23,861 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:14:24,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-02-05 16:14:24,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-02-05 16:14:25,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:25,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-02-05 16:14:26,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:26,505 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-05 16:14:27,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-02-05 16:14:27,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-02-05 16:14:28,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-02-05 16:14:28,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:29,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-02-05 16:14:29,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:29,643 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-02-05 16:14:29,643 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:14:29,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-05 16:14:29,643 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:14:29,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:29,646 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:14:29,648 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:14:29,648 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:14:29,651 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:14:29,653 [ scc.git] DEBUG Already up to date. 2026-02-05 16:14:29,653 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-02-05 16:14:29,942 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-05 16:14:29,943 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-02-05 16:14:29,946 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-02-05 16:14:30,358 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-05 16:14:30,358 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-02-05 16:14:30,361 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-02-05 16:14:30,647 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-05 16:14:30,647 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-02-05 16:14:30,651 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:14:30,651 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:14:30,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:30,653 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-02-05 16:14:30,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:30,658 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-02-05 16:14:30,666 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:14:30,669 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-02-05 16:14:30,669 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-02-05 16:14:30,669 [ scc.git] DEBUG requirements.txt | 2 +- 2026-02-05 16:14:30,669 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-02-05 16:14:30,669 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-02-05 16:14:30,669 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-02-05 16:14:30,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:30,832 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-02-05 16:14:30,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:30,837 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-02-05 16:14:30,844 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:14:30,848 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-05 16:14:30,848 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:14:31,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:31,237 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-05 16:14:31,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:31,242 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-05 16:14:31,249 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-02-05 16:14:31,249 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-02-05 16:14:31,249 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:14:31,249 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:14:31,252 [ scc.git] DEBUG Calling 'git reset --hard c49eca142c37b7b79e263c57f095017e7c490682' 2026-02-05 16:14:31,255 [ scc.git] DEBUG HEAD is now at c49eca1 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-02-05 16:14:31,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:31,662 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-05 16:14:31,665 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-02-05 16:14:31,667 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-02-05 16:14:31,669 [ scc.config] DEBUG Found github.token 2026-02-05 16:14:31,669 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-02-05 16:14:31,669 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:14:31,708 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:14:31,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:31,710 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:14:31,747 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:14:31,750 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff187f32a90> has no local changes 2026-02-05 16:14:31,750 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:14:31,756 [ scc.git] DEBUG [detached HEAD 0c072a9] merge master -Dorg -Ssuccess-only 2026-02-05 16:14:31,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:14:31,756 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:14:32,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-02-05 16:14:32,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-02-05 16:14:33,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-02-05 16:14:33,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-02-05 16:14:34,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:34,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-02-05 16:14:35,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:35,289 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-02-05 16:14:35,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-02-05 16:14:36,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-02-05 16:14:36,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-02-05 16:14:37,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:37,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-02-05 16:14:38,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:38,367 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-02-05 16:14:38,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-02-05 16:14:39,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-02-05 16:14:39,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-02-05 16:14:40,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:41,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-02-05 16:14:41,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:41,572 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-02-05 16:14:41,572 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:14:41,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-05 16:14:41,572 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:14:41,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:41,575 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:14:41,577 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:14:41,577 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:14:41,579 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:14:41,586 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-02-05 16:14:42,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-02-05 16:14:42,273 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-02-05 16:14:42,545 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-05 16:14:42,545 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-02-05 16:14:42,549 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-02-05 16:14:42,815 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-05 16:14:42,815 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-02-05 16:14:42,819 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-02-05 16:14:43,075 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-05 16:14:43,075 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-02-05 16:14:43,079 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:14:43,079 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:14:43,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:43,081 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-05 16:14:43,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:43,087 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-05 16:14:43,099 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-02-05 16:14:43,099 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-02-05 16:14:43,099 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-02-05 16:14:43,099 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-02-05 16:14:43,099 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:14:43,099 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:14:43,102 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-05 16:14:43,105 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-05 16:14:43,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:43,299 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-05 16:14:43,302 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-05 16:14:43,305 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-02-05 16:14:43,307 [ scc.config] DEBUG Found github.token 2026-02-05 16:14:43,307 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-02-05 16:14:43,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-05 16:14:43,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:43,313 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-05 16:14:43,327 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-02-05 16:14:43,327 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-02-05 16:14:43,327 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-02-05 16:14:43,327 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:14:43,327 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:14:43,330 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-05 16:14:43,335 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-05 16:14:43,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:43,721 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-05 16:14:43,725 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-05 16:14:43,728 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-02-05 16:14:43,730 [ scc.config] DEBUG Found github.token 2026-02-05 16:14:43,730 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-02-05 16:14:43,730 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-02-05 16:14:43,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:43,735 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-02-05 16:14:43,743 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:14:43,747 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-02-05 16:14:43,747 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-02-05 16:14:44,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:44,148 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:14:44,184 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:14:44,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:44,187 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:14:44,223 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:14:44,227 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff18d122a90> has no local changes 2026-02-05 16:14:44,227 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:14:44,233 [ scc.git] DEBUG [detached HEAD d3bec06] merge master -Dorg -Ssuccess-only 2026-02-05 16:14:44,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:14:44,233 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:14:44,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-02-05 16:14:45,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-02-05 16:14:45,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-02-05 16:14:46,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:47,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:14:47,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-02-05 16:14:48,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:48,244 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-05 16:14:48,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-02-05 16:14:48,776 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:14:49,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-02-05 16:14:49,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:50,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:14:51,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-02-05 16:14:51,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:51,612 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-02-05 16:14:52,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-02-05 16:14:52,130 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:14:52,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-02-05 16:14:53,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:14:53,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:14:54,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-02-05 16:14:54,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:14:54,881 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-02-05 16:14:55,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-02-05 16:14:55,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-02-05 16:14:56,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-02-05 16:14:56,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-02-05 16:14:57,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-02-05 16:14:57,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-02-05 16:14:58,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-02-05 16:14:58,519 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:14:58,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-05 16:14:58,519 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:14:58,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:58,522 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:14:58,524 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:14:58,524 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:14:58,527 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:14:58,530 [ scc.git] DEBUG Already up to date. 2026-02-05 16:14:58,530 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-02-05 16:14:58,838 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-05 16:14:58,838 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-02-05 16:14:58,843 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-02-05 16:14:59,186 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-05 16:14:59,186 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-02-05 16:14:59,189 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-02-05 16:14:59,443 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-05 16:14:59,444 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-02-05 16:14:59,448 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:14:59,448 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:14:59,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:59,450 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-02-05 16:14:59,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:59,455 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-02-05 16:14:59,462 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:14:59,465 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-02-05 16:14:59,465 [ scc.git] DEBUG package.json | 2 +- 2026-02-05 16:14:59,466 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-02-05 16:14:59,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:14:59,630 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-02-05 16:14:59,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:14:59,635 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-02-05 16:14:59,644 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-05 16:14:59,644 [ scc.git] DEBUG Auto-merging package.json 2026-02-05 16:14:59,645 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:14:59,648 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-02-05 16:14:59,648 [ scc.git] DEBUG package.json | 2 +- 2026-02-05 16:14:59,648 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-02-05 16:15:00,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:00,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-02-05 16:15:00,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:00,043 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-02-05 16:15:00,051 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:15:00,054 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-05 16:15:00,054 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:15:00,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:00,440 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:15:00,477 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:00,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:00,480 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:15:00,516 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:15:00,519 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff187f1b590> has no local changes 2026-02-05 16:15:00,520 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:15:00,525 [ scc.git] DEBUG [detached HEAD f9e4482] merge master -Dorg -Ssuccess-only 2026-02-05 16:15:00,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:15:00,526 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:15:01,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-02-05 16:15:01,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-02-05 16:15:01,692 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:15:02,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-02-05 16:15:02,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:03,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:15:03,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-02-05 16:15:04,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:15:04,420 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:15:04,420 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:15:04,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-05 16:15:04,420 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:04,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:04,423 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:15:04,425 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:15:04,425 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:15:04,428 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:15:04,430 [ scc.git] DEBUG Already up to date. 2026-02-05 16:15:04,430 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-02-05 16:15:04,769 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-02-05 16:15:04,769 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-02-05 16:15:04,773 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:15:04,773 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:04,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:04,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-02-05 16:15:04,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:04,779 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-02-05 16:15:04,786 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:15:04,788 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-05 16:15:04,789 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:15:04,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:04,943 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:15:04,981 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:04,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:04,983 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:15:05,021 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:15:05,024 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff187f2af50> has no local changes 2026-02-05 16:15:05,024 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:15:05,030 [ scc.git] DEBUG [detached HEAD 5854288] merge master -Dorg -Ssuccess-only 2026-02-05 16:15:05,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:15:05,030 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:15:05,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-02-05 16:15:06,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-02-05 16:15:06,169 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:15:06,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-05 16:15:07,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:07,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:15:08,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-05 16:15:09,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:09,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-05 16:15:10,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-02-05 16:15:10,018 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:15:10,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2026-02-05 16:15:11,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2026-02-05 16:15:11,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-05 16:15:12,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:12,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:15:13,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-05 16:15:13,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:14,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-05 16:15:14,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2026-02-05 16:15:14,765 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2026-02-05 16:15:15,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-02-05 16:15:15,282 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:15:15,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-05 16:15:15,282 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:15,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:15,284 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:15:15,287 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:15:15,287 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:15:15,289 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:15:15,292 [ scc.git] DEBUG Already up to date. 2026-02-05 16:15:15,292 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2026-02-05 16:15:15,716 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-02-05 16:15:15,716 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2026-02-05 16:15:15,720 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-02-05 16:15:15,974 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-02-05 16:15:15,974 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-02-05 16:15:15,978 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:15:15,978 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:15,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:15,980 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2026-02-05 16:15:15,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:15,986 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2026-02-05 16:15:15,993 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:15:15,996 [ scc.git] DEBUG setup.py | 4 +- 2026-02-05 16:15:15,996 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2026-02-05 16:15:15,996 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2026-02-05 16:15:15,996 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2026-02-05 16:15:16,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:16,161 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-02-05 16:15:16,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:16,166 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-02-05 16:15:16,172 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:15:16,175 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-05 16:15:16,175 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:15:16,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:16,606 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:15:16,645 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:16,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:16,647 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:15:16,684 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:15:16,687 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff187f03c10> has no local changes 2026-02-05 16:15:16,687 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:15:16,693 [ scc.git] DEBUG [detached HEAD 04fd20e] merge master -Dorg -Ssuccess-only 2026-02-05 16:15:16,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:15:16,693 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:15:17,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-02-05 16:15:17,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-02-05 16:15:17,725 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:15:18,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-02-05 16:15:18,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:19,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:15:20,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-02-05 16:15:20,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:15:20,500 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:15:21,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-02-05 16:15:21,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-02-05 16:15:22,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-02-05 16:15:22,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:23,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-02-05 16:15:23,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:15:23,682 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-02-05 16:15:23,682 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:15:23,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-05 16:15:23,683 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:23,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:23,685 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:15:23,687 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:15:23,688 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:15:23,690 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:15:23,693 [ scc.git] DEBUG Already up to date. 2026-02-05 16:15:23,693 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-02-05 16:15:23,996 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-02-05 16:15:23,996 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-02-05 16:15:24,000 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-02-05 16:15:24,387 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-02-05 16:15:24,387 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-02-05 16:15:24,391 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:15:24,391 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:24,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:24,393 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-05 16:15:24,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:24,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-05 16:15:24,405 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-02-05 16:15:24,406 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:15:24,406 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-02-05 16:15:24,406 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-02-05 16:15:24,406 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-02-05 16:15:24,406 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-02-05 16:15:24,406 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-02-05 16:15:24,406 [ scc.git] DEBUG Auto-merging setup.py 2026-02-05 16:15:24,406 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-02-05 16:15:24,406 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:15:24,408 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-02-05 16:15:24,412 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-02-05 16:15:24,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:24,616 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-05 16:15:24,619 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-02-05 16:15:24,622 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - setup.py - omero_signup/urls.py --conflicts 2026-02-05 16:15:24,624 [ scc.config] DEBUG Found github.token 2026-02-05 16:15:24,624 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-02-05 16:15:24,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-02-05 16:15:24,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:24,628 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-02-05 16:15:24,634 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:15:24,637 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-05 16:15:24,637 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:15:25,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:25,039 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:15:25,075 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:25,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:25,077 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:15:25,113 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:15:25,117 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff187f1a6d0> has no local changes 2026-02-05 16:15:25,117 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:15:25,122 [ scc.git] DEBUG [detached HEAD 71ea537] merge master -Dorg -Ssuccess-only 2026-02-05 16:15:25,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:15:25,123 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:15:25,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-02-05 16:15:26,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-02-05 16:15:26,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-02-05 16:15:27,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-02-05 16:15:27,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-02-05 16:15:28,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:28,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:15:28,851 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:15:28,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-05 16:15:28,851 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:28,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:28,854 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:15:28,856 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:15:28,856 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:15:28,859 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:15:28,866 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-02-05 16:15:29,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-02-05 16:15:30,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-02-05 16:15:31,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-02-05 16:15:31,202 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:15:31,202 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:31,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:31,205 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:15:31,244 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:31,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:31,246 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:15:31,282 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:15:31,286 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff187f43b10> has no local changes 2026-02-05 16:15:31,286 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:15:31,291 [ scc.git] DEBUG [detached HEAD 37a1708] merge master -Dorg -Ssuccess-only 2026-02-05 16:15:31,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:15:31,291 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:15:31,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-02-05 16:15:32,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-02-05 16:15:32,259 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:15:32,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-02-05 16:15:33,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:33,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:15:34,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-02-05 16:15:35,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:15:35,047 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:15:35,047 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:15:35,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-05 16:15:35,048 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:35,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:35,050 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:15:35,052 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:15:35,053 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:15:35,055 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:15:35,058 [ scc.git] DEBUG Already up to date. 2026-02-05 16:15:35,058 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-02-05 16:15:35,327 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-02-05 16:15:35,328 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-02-05 16:15:35,331 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:15:35,332 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:35,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:35,334 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-02-05 16:15:35,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:35,338 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-02-05 16:15:35,344 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:15:35,347 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-05 16:15:35,347 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:15:35,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:35,563 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:15:35,601 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:35,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:35,603 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:15:35,640 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:15:35,643 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff187f8b550> has no local changes 2026-02-05 16:15:35,643 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:15:35,648 [ scc.git] DEBUG [detached HEAD 875f911] merge master -Dorg -Ssuccess-only 2026-02-05 16:15:35,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:15:35,649 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:15:36,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-02-05 16:15:36,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-02-05 16:15:36,642 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:15:37,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-02-05 16:15:37,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:38,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:15:39,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-02-05 16:15:39,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:15:39,580 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:15:39,580 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:15:39,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-05 16:15:39,580 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:39,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:39,582 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:15:39,585 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:15:39,585 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:15:39,587 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:15:39,594 [ scc.git] DEBUG Updating deab817..160d894 2026-02-05 16:15:40,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-02-05 16:15:40,361 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-02-05 16:15:40,652 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-02-05 16:15:40,653 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-02-05 16:15:40,657 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:15:40,657 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:40,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:40,659 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-02-05 16:15:40,661 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:40,663 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-02-05 16:15:40,669 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:15:40,672 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-05 16:15:40,672 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:15:40,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:40,845 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:15:40,884 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:40,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:40,886 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:15:40,924 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:15:40,927 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff187faae10> has no local changes 2026-02-05 16:15:40,927 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:15:40,933 [ scc.git] DEBUG [detached HEAD e1ab8d6] merge master -Dorg -Ssuccess-only 2026-02-05 16:15:40,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:15:40,933 [ scc.git] INFO Overriding base-branch from master to main 2026-02-05 16:15:40,933 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:15:41,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-02-05 16:15:41,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-02-05 16:15:42,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-02-05 16:15:42,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-02-05 16:15:43,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:44,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:15:44,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-02-05 16:15:45,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:15:45,107 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-02-05 16:15:45,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-02-05 16:15:46,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-02-05 16:15:46,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-02-05 16:15:47,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-02-05 16:15:47,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:48,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-02-05 16:15:48,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:15:48,786 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-02-05 16:15:48,786 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:15:48,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-05 16:15:48,787 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:48,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:48,789 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-02-05 16:15:48,791 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:15:48,791 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-02-05 16:15:48,794 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-02-05 16:15:48,801 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-02-05 16:15:49,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-02-05 16:15:50,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-02-05 16:15:50,475 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-02-05 16:15:50,761 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-02-05 16:15:50,761 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-02-05 16:15:50,766 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-02-05 16:15:51,032 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-02-05 16:15:51,032 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-02-05 16:15:51,037 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:15:51,037 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:51,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:51,039 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-05 16:15:51,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:51,044 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-05 16:15:51,052 [ scc.git] DEBUG Auto-merging README.rst 2026-02-05 16:15:51,052 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-02-05 16:15:51,052 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-02-05 16:15:51,052 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-02-05 16:15:51,052 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-05 16:15:51,052 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-05 16:15:51,055 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-02-05 16:15:51,058 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-02-05 16:15:51,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:51,240 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-05 16:15:51,243 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-02-05 16:15:51,245 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#46](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-02-05 16:15:51,247 [ scc.config] DEBUG Found github.token 2026-02-05 16:15:51,247 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-02-05 16:15:51,247 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-02-05 16:15:51,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:51,252 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-02-05 16:15:51,260 [ scc.git] DEBUG Auto-merging README.rst 2026-02-05 16:15:51,260 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-02-05 16:15:51,261 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:15:51,264 [ scc.git] DEBUG README.rst | 3 + 2026-02-05 16:15:51,264 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-02-05 16:15:51,264 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-02-05 16:15:51,264 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-02-05 16:15:51,264 [ scc.git] DEBUG setup.py | 5 +- 2026-02-05 16:15:51,264 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-02-05 16:15:51,264 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-02-05 16:15:51,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:51,689 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:15:51,729 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:51,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:51,731 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:15:51,768 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:15:51,771 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff187f6be90> has no local changes 2026-02-05 16:15:51,771 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:15:51,778 [ scc.git] DEBUG [detached HEAD 9d2d5e4] merge master -Dorg -Ssuccess-only 2026-02-05 16:15:51,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:15:51,778 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:15:52,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-02-05 16:15:52,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-02-05 16:15:52,708 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:15:53,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-02-05 16:15:53,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:54,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:15:54,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-02-05 16:15:55,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:15:55,366 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:15:55,366 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:15:55,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-05 16:15:55,366 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:55,366 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:55,369 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:15:55,371 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:15:55,371 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:15:55,374 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:15:55,376 [ scc.git] DEBUG Already up to date. 2026-02-05 16:15:55,377 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-02-05 16:15:55,669 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-02-05 16:15:55,669 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-02-05 16:15:55,673 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:15:55,673 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:55,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:55,675 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-02-05 16:15:55,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:55,680 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-02-05 16:15:55,686 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:15:55,688 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-05 16:15:55,689 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:15:55,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:15:55,873 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:15:55,912 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:55,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:55,915 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:15:55,951 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:15:55,954 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff187f6bd90> has no local changes 2026-02-05 16:15:55,954 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:15:55,960 [ scc.git] DEBUG [detached HEAD 763cea9] merge master -Dorg -Ssuccess-only 2026-02-05 16:15:55,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:15:55,960 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:15:56,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-02-05 16:15:56,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-02-05 16:15:56,947 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-05 16:15:57,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-02-05 16:15:58,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-05 16:15:58,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-05 16:15:59,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-02-05 16:15:59,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-02-05 16:15:59,764 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:15:59,764 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:15:59,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-05 16:15:59,764 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:15:59,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:15:59,767 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:15:59,769 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:15:59,769 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:15:59,772 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:15:59,774 [ scc.git] DEBUG Already up to date. 2026-02-05 16:15:59,774 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-02-05 16:16:00,065 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-02-05 16:16:00,065 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-02-05 16:16:00,069 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:16:00,069 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:16:00,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:16:00,072 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-02-05 16:16:00,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:16:00,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-02-05 16:16:00,082 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-05 16:16:00,085 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-05 16:16:00,085 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-05 16:16:00,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:00,247 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:16:00,283 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:16:00,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:16:00,286 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:16:00,321 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:16:00,324 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff18d0a0fd0> has no local changes 2026-02-05 16:16:00,324 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:16:00,330 [ scc.git] DEBUG [detached HEAD 1f2aba0] merge master -Dorg -Ssuccess-only 2026-02-05 16:16:00,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:00,331 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:16:00,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-02-05 16:16:00,689 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:16:00,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-05 16:16:00,689 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:16:00,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:16:00,691 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-05 16:16:00,693 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:16:00,693 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-05 16:16:00,696 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-05 16:16:00,698 [ scc.git] DEBUG Already up to date. 2026-02-05 16:16:00,698 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:16:00,698 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:16:00,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:16:00,701 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:16:00,736 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:16:00,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:16:00,738 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:16:00,772 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:16:00,775 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff184606650> has no local changes 2026-02-05 16:16:00,775 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:16:00,780 [ scc.git] DEBUG [detached HEAD cfae91d] merge master -Dorg -Ssuccess-only 2026-02-05 16:16:00,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:00,781 [ scc.git] INFO Overriding base-branch from master to develop 2026-02-05 16:16:00,781 [ scc.repo] DEBUG ## PRs found: 2026-02-05 16:16:01,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-02-05 16:16:01,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2026-02-05 16:16:02,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2026-02-05 16:16:02,403 [ scc.repo] DEBUG ## Branches found: 2026-02-05 16:16:02,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-05 16:16:02,403 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:16:02,403 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:16:02,405 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-02-05 16:16:02,407 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-05 16:16:02,407 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-02-05 16:16:02,410 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-02-05 16:16:02,421 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-02-05 16:16:03,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-02-05 16:16:04,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-02-05 16:16:04,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-02-05 16:16:05,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-02-05 16:16:06,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-02-05 16:16:07,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-02-05 16:16:08,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-02-05 16:16:08,164 [ scc.git] DEBUG ## Unique users: [] 2026-02-05 16:16:08,164 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:16:08,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:16:08,166 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-05 16:16:08,203 [ scc.git] DEBUG Get sha1 of %s 2026-02-05 16:16:08,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-05 16:16:08,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:16:08,242 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:16:08,246 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff187fc8bd0> has no local changes 2026-02-05 16:16:08,246 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:16:08,252 [ scc.git] DEBUG [detached HEAD 1af2e83] merge master -Dorg -Ssuccess-only 2026-02-05 16:16:08,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:08,252 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-05 16:16:08,323 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-02-05 16:16:08,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:08,592 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-02-05 16:16:08,594 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-02-05 16:16:08,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:09,003 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-02-05 16:16:09,005 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-02-05 16:16:09,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:09,413 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-02-05 16:16:09,415 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-02-05 16:16:09,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:09,820 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-02-05 16:16:10,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:10,231 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-02-05 16:16:10,233 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-02-05 16:16:10,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:10,650 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-02-05 16:16:10,651 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-02-05 16:16:11,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:11,088 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-02-05 16:16:11,090 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-02-05 16:16:11,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:11,520 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-02-05 16:16:11,522 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-02-05 16:16:11,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:11,941 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-02-05 16:16:11,943 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-02-05 16:16:12,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:12,353 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-02-05 16:16:12,355 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-02-05 16:16:12,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:12,775 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-02-05 16:16:12,776 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-02-05 16:16:13,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:13,212 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-02-05 16:16:13,214 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-02-05 16:16:13,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:13,637 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-02-05 16:16:14,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:14,066 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-02-05 16:16:14,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:14,459 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-02-05 16:16:14,461 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-02-05 16:16:14,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:14,912 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-02-05 16:16:15,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:15,347 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-02-05 16:16:15,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:15,761 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-02-05 16:16:15,763 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-02-05 16:16:16,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:16,172 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-02-05 16:16:16,174 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-02-05 16:16:16,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:16,574 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-02-05 16:16:16,576 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-02-05 16:16:16,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:16,978 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-02-05 16:16:16,980 [ scc.config] DEBUG Found submodule.scripts.url 2026-02-05 16:16:17,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-05 16:16:17,385 [ scc.config] DEBUG Found submodule.scripts.branch 2026-02-05 16:16:17,386 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-05 16:16:17,459 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff18d1d5250> has local changes 2026-02-05 16:16:17,459 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 182 will-moore 'Revert "Remove support for Plate import"' (exclude comment) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9530c10 Previously merged: - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Repository: ome/omero-figure Excluded PRs: - PR 666 will-moore 'Standalone app' (stage: draft) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..b79d638b Previously merged: - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 662 will-moore 'Export script runnable without OMERO' - PR 663 will-moore 'Zarr' Conflicting PRs (not included): - PR 664 Nirkan 'Handle many channels ' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#46 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/46/)' 2026-02-05 16:16:17,470 [ scc.git] DEBUG [detached HEAD 5b05846] merge master -Dorg -Ssuccess-only 2026-02-05 16:16:17,470 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-02-05 16:16:17,471 [ scc.merge] INFO Repository: ome/omero-plugins 2026-02-05 16:16:17,471 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,471 [ scc.merge] INFO 2026-02-05 16:16:17,471 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-05 16:16:17,471 [ scc.merge] INFO 2026-02-05 16:16:17,471 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-02-05 16:16:17,471 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,471 [ scc.merge] INFO 2026-02-05 16:16:17,471 [ scc.merge] INFO 2026-02-05 16:16:17,471 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-02-05 16:16:17,471 [ scc.merge] INFO Excluded PRs: 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-02-05 16:16:17,471 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,471 [ scc.merge] INFO 2026-02-05 16:16:17,471 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:16:17,471 [ scc.merge] INFO 2026-02-05 16:16:17,471 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-02-05 16:16:17,471 [ scc.merge] INFO Excluded PRs: 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-02-05 16:16:17,471 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-02-05 16:16:17,471 [ scc.merge] INFO Previously merged: 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-02-05 16:16:17,471 [ scc.merge] INFO 2026-02-05 16:16:17,471 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-02-05 16:16:17,471 [ scc.merge] INFO 2026-02-05 16:16:17,471 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-02-05 16:16:17,471 [ scc.merge] INFO Excluded PRs: 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' (exclude comment) 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-02-05 16:16:17,471 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-02-05 16:16:17,472 [ scc.merge] INFO Updating 11d3587..9530c10 2026-02-05 16:16:17,472 [ scc.merge] INFO Previously merged: 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-05 16:16:17,472 [ scc.merge] INFO 2026-02-05 16:16:17,472 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-02-05 16:16:17,472 [ scc.merge] INFO 2026-02-05 16:16:17,472 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-02-05 16:16:17,472 [ scc.merge] INFO 2026-02-05 16:16:17,472 [ scc.merge] INFO Repository: ome/omero-figure 2026-02-05 16:16:17,472 [ scc.merge] INFO Excluded PRs: 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' (stage: draft) 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-02-05 16:16:17,472 [ scc.merge] INFO Updating 9cc36cde..b79d638b 2026-02-05 16:16:17,472 [ scc.merge] INFO Previously merged: 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-02-05 16:16:17,472 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-05 16:16:17,473 [ scc.merge] INFO 2026-02-05 16:16:17,473 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 662 will-moore 'Export script runnable without OMERO' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-02-05 16:16:17,473 [ scc.merge] INFO 2026-02-05 16:16:17,473 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-02-05 16:16:17,473 [ scc.merge] INFO 2026-02-05 16:16:17,473 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-02-05 16:16:17,473 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,473 [ scc.merge] INFO 2026-02-05 16:16:17,473 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:16:17,473 [ scc.merge] INFO 2026-02-05 16:16:17,473 [ scc.merge] INFO Repository: ome/omero-gallery 2026-02-05 16:16:17,473 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,473 [ scc.merge] INFO 2026-02-05 16:16:17,473 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-02-05 16:16:17,473 [ scc.merge] INFO 2026-02-05 16:16:17,473 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-02-05 16:16:17,473 [ scc.merge] INFO 2026-02-05 16:16:17,473 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-02-05 16:16:17,473 [ scc.merge] INFO Excluded PRs: 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-02-05 16:16:17,473 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-02-05 16:16:17,473 [ scc.merge] INFO Previously merged: 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-02-05 16:16:17,473 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-05 16:16:17,473 [ scc.merge] INFO 2026-02-05 16:16:17,474 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-02-05 16:16:17,474 [ scc.merge] INFO 2026-02-05 16:16:17,474 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-02-05 16:16:17,474 [ scc.merge] INFO 2026-02-05 16:16:17,474 [ scc.merge] INFO Repository: ome/omero-mapr 2026-02-05 16:16:17,474 [ scc.merge] INFO Excluded PRs: 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-02-05 16:16:17,474 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,474 [ scc.merge] INFO 2026-02-05 16:16:17,474 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-05 16:16:17,474 [ scc.merge] INFO 2026-02-05 16:16:17,474 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:16:17,474 [ scc.merge] INFO 2026-02-05 16:16:17,474 [ scc.merge] INFO Repository: ome/omero-metadata 2026-02-05 16:16:17,474 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-02-05 16:16:17,474 [ scc.merge] INFO Previously merged: 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-05 16:16:17,474 [ scc.merge] INFO 2026-02-05 16:16:17,474 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-02-05 16:16:17,474 [ scc.merge] INFO 2026-02-05 16:16:17,474 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-02-05 16:16:17,474 [ scc.merge] INFO 2026-02-05 16:16:17,474 [ scc.merge] INFO Repository: ome/omero-parade 2026-02-05 16:16:17,474 [ scc.merge] INFO Excluded PRs: 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-02-05 16:16:17,474 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,474 [ scc.merge] INFO 2026-02-05 16:16:17,474 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-02-05 16:16:17,474 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-05 16:16:17,474 [ scc.merge] INFO 2026-02-05 16:16:17,474 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-02-05 16:16:17,474 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Repository: ome/omero-rois 2026-02-05 16:16:17,475 [ scc.merge] INFO Excluded PRs: 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-02-05 16:16:17,475 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Repository: ome/omero-signup 2026-02-05 16:16:17,475 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-02-05 16:16:17,475 [ scc.merge] INFO Excluded PRs: 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2026-02-05 16:16:17,475 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-02-05 16:16:17,475 [ scc.merge] INFO Previously merged: 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Repository: ome/omero-upload 2026-02-05 16:16:17,475 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-02-05 16:16:17,475 [ scc.merge] INFO Updating deab817..160d894 2026-02-05 16:16:17,475 [ scc.merge] INFO Previously merged: 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:16:17,475 [ scc.merge] INFO 2026-02-05 16:16:17,475 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-02-05 16:16:17,475 [ scc.merge] INFO Excluded PRs: 2026-02-05 16:16:17,475 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-02-05 16:16:17,476 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-02-05 16:16:17,476 [ scc.merge] INFO Previously merged: 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-02-05 16:16:17,476 [ scc.merge] INFO 2026-02-05 16:16:17,476 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-02-05 16:16:17,476 [ scc.merge] INFO 2026-02-05 16:16:17,476 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-02-05 16:16:17,476 [ scc.merge] INFO 2026-02-05 16:16:17,476 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-02-05 16:16:17,476 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,476 [ scc.merge] INFO 2026-02-05 16:16:17,476 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:16:17,476 [ scc.merge] INFO 2026-02-05 16:16:17,476 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-02-05 16:16:17,476 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,476 [ scc.merge] INFO 2026-02-05 16:16:17,476 [ scc.merge] INFO Merged PRs: 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-05 16:16:17,476 [ scc.merge] INFO 2026-02-05 16:16:17,476 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-02-05 16:16:17,476 [ scc.merge] INFO Already up to date. 2026-02-05 16:16:17,476 [ scc.merge] INFO 2026-02-05 16:16:17,476 [ scc.merge] INFO 2026-02-05 16:16:17,476 [ scc.merge] INFO Repository: ome/scripts 2026-02-05 16:16:17,476 [ scc.merge] INFO Excluded PRs: 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2026-02-05 16:16:17,476 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-02-05 16:16:17,476 [ scc.merge] INFO Previously merged: 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-02-05 16:16:17,476 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-02-05 16:16:17,476 [ scc.merge] INFO 2026-02-05 16:16:17,476 [ scc.merge] INFO 2026-02-05 16:16:17,476 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-02-05 16:16:17,476 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-05 16:16:17,478 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-05 16:16:17,480 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-05 16:16:17,483 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-05 16:16:17,485 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-05 16:16:17,487 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-05 16:16:17,489 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-05 16:16:17,491 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-05 16:16:17,493 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-05 16:16:17,495 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-05 16:16:17,497 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-05 16:16:17,499 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-05 16:16:17,501 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-05 16:16:17,503 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-05 16:16:17,505 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-05 16:16:17,507 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-05 16:16:17,509 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-05 16:16:17,514 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-05 16:16:17,516 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-05 16:16:17,519 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-05 16:16:17,521 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-05 16:16:17,523 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-05 16:16:17,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-05 16:16:17,525 [ scc.git] DEBUG Calling 'git remote' 2026-02-05 16:16:17,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.5-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 899bf94] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD e411d0b] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-05 16:17:06,091 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-05 16:17:16,353 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-05 16:17:19,009 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-05 16:17:24,128 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-05 16:18:08,674 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS