Started by upstream project "Trigger" build number 68 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 44 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.0.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.11.0-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.4-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.1.4-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached pyjwt-2.11.0-py3-none-any.whl (28 kB) Using cached cryptography-46.0.4-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.1.4-py3-none-any.whl (152 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.1.4 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.4 future-1.0.0 idna-3.11 pycparser-3.0 pyjwt-2.11.0 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-02-06 00:38:35,799 [ scc.config] DEBUG Found github.token 2026-02-06 00:38:35,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-02-06 00:38:36,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:38:36,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:38:36,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-02-06 00:38:36,960 [ scc.gh] DEBUG 4907 remaining from 5000 (Reset at 01:02 2026-02-06 00:38:36,961 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:38:36,963 [ scc.git] DEBUG Check current status 2026-02-06 00:38:36,963 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:38:36,966 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-06 00:38:36,966 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:38:37,013 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-06 00:38:37,015 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-06 00:38:37,018 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-06 00:38:37,021 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-06 00:38:37,025 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-02-06 00:38:37,028 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-06 00:38:37,030 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-06 00:38:37,033 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-02-06 00:38:37,036 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-06 00:38:37,039 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-06 00:38:37,042 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-06 00:38:37,045 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-06 00:38:37,048 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-06 00:38:37,051 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-06 00:38:37,054 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-06 00:38:37,057 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-06 00:38:37,059 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-06 00:38:37,062 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-06 00:38:37,064 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-06 00:38:37,067 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-06 00:38:37,070 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-06 00:38:37,073 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-02-06 00:38:37,076 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:38:37,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-02-06 00:38:37,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:38:38,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:38:38,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:38:39,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:38:39,289 [ scc.git] DEBUG Resetting... 2026-02-06 00:38:39,289 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-02-06 00:38:39,296 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-06 00:38:39,297 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-02-06 00:38:39,394 [ scc.git] DEBUG Check current status 2026-02-06 00:38:39,394 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:38:39,397 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-06 00:38:39,397 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:38:39,442 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-06 00:38:39,445 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-06 00:38:39,448 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-06 00:38:39,450 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-06 00:38:39,454 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-02-06 00:38:39,456 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-06 00:38:39,459 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-06 00:38:39,462 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-02-06 00:38:39,465 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-06 00:38:39,467 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-06 00:38:39,470 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-06 00:38:39,473 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-06 00:38:39,476 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-06 00:38:39,478 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-06 00:38:39,481 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-06 00:38:39,484 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-06 00:38:39,486 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-06 00:38:39,488 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-06 00:38:39,491 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-06 00:38:39,493 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-06 00:38:39,496 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-06 00:38:39,499 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-02-06 00:38:39,500 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-02-06 00:38:39,500 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-02-06 00:38:39,500 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-02-06 00:38:39,500 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-02-06 00:38:39,500 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-02-06 00:38:39,500 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:38:39,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-02-06 00:38:40,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-02-06 00:38:40,356 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:38:40,356 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-06 00:38:40,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-02-06 00:38:40,893 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:38:40,893 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-06 00:38:41,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-02-06 00:38:41,390 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:38:41,390 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-06 00:38:41,390 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:38:41,390 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:38:41,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:38:41,392 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:38:41,394 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:38:41,395 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:38:41,397 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:38:41,400 [ scc.git] DEBUG Already up to date. 2026-02-06 00:38:41,400 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-02-06 00:38:41,674 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-06 00:38:41,674 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-02-06 00:38:41,679 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-02-06 00:38:41,935 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-06 00:38:41,935 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-02-06 00:38:41,939 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-02-06 00:38:42,194 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-06 00:38:42,194 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-02-06 00:38:42,199 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:38:42,199 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:38:42,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:38:42,201 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-06 00:38:42,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:38:42,205 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-06 00:38:42,220 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:38:42,222 [ scc.git] DEBUG scripts | 2 +- 2026-02-06 00:38:42,223 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:38:42,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:38:42,378 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-06 00:38:42,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:38:42,383 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-06 00:38:42,397 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:38:42,400 [ scc.git] DEBUG omero-figure | 2 +- 2026-02-06 00:38:42,400 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:38:42,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:38:42,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-06 00:38:42,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:38:42,773 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-06 00:38:42,788 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:38:42,790 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-02-06 00:38:42,791 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:38:43,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:38:43,174 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:38:43,233 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-02-06 00:38:43,258 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-02-06 00:38:43,272 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-02-06 00:38:43,273 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:38:43,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:38:43,275 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:38:43,354 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7c9831590> has no local changes 2026-02-06 00:38:43,354 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:38:43,423 [ scc.git] DEBUG [detached HEAD 6dc6458] merge master -Dorg -Snone 2026-02-06 00:38:43,423 [ scc.merge] INFO Repository: ome/omero-plugins 2026-02-06 00:38:43,423 [ scc.merge] INFO Already up to date. 2026-02-06 00:38:43,423 [ scc.merge] INFO 2026-02-06 00:38:43,423 [ scc.merge] INFO Merged PRs: 2026-02-06 00:38:43,423 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-06 00:38:43,423 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-06 00:38:43,423 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-06 00:38:43,423 [ scc.merge] INFO 2026-02-06 00:38:43,423 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-02-06 00:38:43,423 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9530c10ba9823fcba6b39139987bf4bcd4a60179' From https://github.com/ome/omero-figure b79d638b..e241dc01 master -> origin/master Submodule path 'omero-figure': checked out 'e241dc01b21d8800b6e34e087cbf7099046f68e6' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-02-06 00:38:54,820 [ scc.config] DEBUG Found github.token 2026-02-06 00:38:54,822 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-02-06 00:38:55,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:38:55,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:38:55,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-02-06 00:38:55,808 [ scc.gh] DEBUG 4893 remaining from 5000 (Reset at 01:02 2026-02-06 00:38:55,809 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:38:55,811 [ scc.git] DEBUG Check current status 2026-02-06 00:38:55,812 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:38:55,814 [ scc.git] DEBUG 6dc6458 merge master -Dorg -Snone 2026-02-06 00:38:55,814 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:38:55,861 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-06 00:38:55,864 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-06 00:38:55,867 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-02-06 00:38:55,870 [ scc.git] DEBUG +9530c10ba9823fcba6b39139987bf4bcd4a60179 omero-cli-zarr (v0.7.0rc1-16-g9530c10) 2026-02-06 00:38:55,880 [ scc.git] DEBUG +e241dc01b21d8800b6e34e087cbf7099046f68e6 omero-figure (v7.3.1-36-ge241dc01) 2026-02-06 00:38:55,883 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-06 00:38:55,886 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-06 00:38:55,889 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-02-06 00:38:55,892 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-06 00:38:55,895 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-02-06 00:38:55,897 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-06 00:38:55,900 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-06 00:38:55,903 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-06 00:38:55,906 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-06 00:38:55,909 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-02-06 00:38:55,912 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-06 00:38:55,915 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-02-06 00:38:55,917 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-02-06 00:38:55,920 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-06 00:38:55,922 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-06 00:38:55,925 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-06 00:38:55,928 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-02-06 00:38:55,931 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:38:55,931 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-02-06 00:38:55,932 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-02-06 00:38:56,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-02-06 00:38:56,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:38:57,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:38:57,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:38:58,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:38:58,078 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:38:58,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-06 00:38:58,154 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:38:58,156 [ scc.git] DEBUG Check current status 2026-02-06 00:38:58,156 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:38:58,159 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-02-06 00:38:58,159 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:38:58,199 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:38:58,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-02-06 00:38:59,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:38:59,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:00,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:00,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:00,528 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:00,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:00,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-06 00:39:00,568 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:00,570 [ scc.git] DEBUG Check current status 2026-02-06 00:39:00,570 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:00,572 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-02-06 00:39:00,573 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:00,611 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:01,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-02-06 00:39:01,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:02,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:02,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:03,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:03,107 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:03,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:03,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-06 00:39:03,147 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:03,149 [ scc.git] DEBUG Check current status 2026-02-06 00:39:03,149 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:03,151 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-02-06 00:39:03,151 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:03,191 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:03,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-02-06 00:39:04,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:04,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:05,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:05,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:05,513 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:05,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:05,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-06 00:39:05,553 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:05,556 [ scc.git] DEBUG Check current status 2026-02-06 00:39:05,556 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:05,558 [ scc.git] DEBUG 9530c10 Merge pull request #192 from jburel/pixels_size 2026-02-06 00:39:05,558 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:05,598 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:06,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-02-06 00:39:06,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:06,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:07,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:07,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:07,798 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:07,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:07,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-06 00:39:07,837 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:07,839 [ scc.git] DEBUG Check current status 2026-02-06 00:39:07,839 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:07,842 [ scc.git] DEBUG e241dc01 Merge pull request #648 from kaabl/PR543-resurrect 2026-02-06 00:39:07,842 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:07,882 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:08,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-02-06 00:39:08,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:09,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:09,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:10,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:10,052 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:10,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:10,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-06 00:39:10,092 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:10,094 [ scc.git] DEBUG Check current status 2026-02-06 00:39:10,094 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:10,096 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-02-06 00:39:10,096 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:10,135 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:10,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-02-06 00:39:11,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:11,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:11,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:12,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:12,378 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:12,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:12,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-06 00:39:12,417 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:12,419 [ scc.git] DEBUG Check current status 2026-02-06 00:39:12,419 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:12,422 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-02-06 00:39:12,422 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:12,462 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:12,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-02-06 00:39:13,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:13,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:14,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:14,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:14,696 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:14,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:14,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-06 00:39:14,734 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:14,736 [ scc.git] DEBUG Check current status 2026-02-06 00:39:14,736 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:14,738 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-02-06 00:39:14,738 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:14,777 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:15,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-02-06 00:39:15,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:16,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:16,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:16,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:16,962 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:17,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:17,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-06 00:39:17,001 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:17,003 [ scc.git] DEBUG Check current status 2026-02-06 00:39:17,003 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:17,006 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-02-06 00:39:17,006 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:17,044 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:17,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-02-06 00:39:18,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:18,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:18,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:19,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:19,267 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:19,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:19,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-06 00:39:19,306 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:19,308 [ scc.git] DEBUG Check current status 2026-02-06 00:39:19,308 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:19,310 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-06 00:39:19,310 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:19,350 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:19,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-02-06 00:39:20,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:20,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:21,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:21,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:21,541 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:21,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:21,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-06 00:39:21,581 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:21,583 [ scc.git] DEBUG Check current status 2026-02-06 00:39:21,583 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:21,585 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-02-06 00:39:21,586 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:21,623 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:22,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-02-06 00:39:22,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:22,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:23,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:23,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:23,798 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:23,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:23,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-06 00:39:23,836 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:23,838 [ scc.git] DEBUG Check current status 2026-02-06 00:39:23,838 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:23,840 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-02-06 00:39:23,840 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:23,881 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:24,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-02-06 00:39:24,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:25,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:25,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:26,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:26,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:26,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:26,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-06 00:39:26,125 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:26,127 [ scc.git] DEBUG Check current status 2026-02-06 00:39:26,127 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:26,129 [ scc.git] DEBUG bdfeb5e bump sphinx version 2026-02-06 00:39:26,129 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:26,167 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:26,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-02-06 00:39:27,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:27,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:27,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:28,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:28,370 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:28,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:28,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-06 00:39:28,408 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:28,410 [ scc.git] DEBUG Check current status 2026-02-06 00:39:28,410 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:28,412 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-02-06 00:39:28,413 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:28,451 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:28,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-02-06 00:39:29,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:29,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:30,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:30,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:30,600 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:30,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:30,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-06 00:39:30,640 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:30,642 [ scc.git] DEBUG Check current status 2026-02-06 00:39:30,642 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:30,645 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-02-06 00:39:30,645 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:30,684 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:31,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-06 00:39:31,029 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-06 00:39:31,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-02-06 00:39:31,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:32,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:32,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:32,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:32,991 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:33,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:33,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-06 00:39:33,030 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:33,032 [ scc.git] DEBUG Check current status 2026-02-06 00:39:33,032 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:33,034 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-02-06 00:39:33,035 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:33,075 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:33,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-02-06 00:39:34,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:34,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:34,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:35,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:35,443 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:35,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:35,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-06 00:39:35,481 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:35,483 [ scc.git] DEBUG Check current status 2026-02-06 00:39:35,483 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:35,485 [ scc.git] DEBUG 160d894 Fix display of code 2026-02-06 00:39:35,485 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:35,526 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:35,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-02-06 00:39:36,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:36,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:37,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:37,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:37,760 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:37,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:37,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-06 00:39:37,799 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:37,801 [ scc.git] DEBUG Check current status 2026-02-06 00:39:37,801 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:37,803 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-02-06 00:39:37,804 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:37,841 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:37,842 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-02-06 00:39:38,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-02-06 00:39:38,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:39,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:39,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:40,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:40,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:40,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:40,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-06 00:39:40,044 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:40,046 [ scc.git] DEBUG Check current status 2026-02-06 00:39:40,046 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:40,048 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-02-06 00:39:40,048 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:40,088 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:40,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-06 00:39:40,438 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-06 00:39:40,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-02-06 00:39:41,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:41,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:41,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:42,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:42,415 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:42,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:42,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-06 00:39:42,454 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:42,457 [ scc.git] DEBUG Check current status 2026-02-06 00:39:42,457 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:42,459 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-02-06 00:39:42,459 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:42,498 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:42,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-06 00:39:42,841 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-06 00:39:43,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-02-06 00:39:43,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:43,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:44,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:44,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:44,838 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:44,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:44,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-06 00:39:44,878 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:44,880 [ scc.git] DEBUG Check current status 2026-02-06 00:39:44,880 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:44,883 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-02-06 00:39:44,883 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:44,924 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:45,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-02-06 00:39:45,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:46,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:46,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:47,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:47,063 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:47,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:47,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-06 00:39:47,103 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-06 00:39:47,105 [ scc.git] DEBUG Check current status 2026-02-06 00:39:47,105 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:47,107 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-02-06 00:39:47,108 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:47,150 [ scc.config] DEBUG Found remote.origin.url 2026-02-06 00:39:47,150 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-02-06 00:39:47,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-06 00:39:47,486 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-06 00:39:47,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-02-06 00:39:48,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-06 00:39:48,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-06 00:39:49,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-06 00:39:49,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-06 00:39:49,641 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:49,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:49,681 [ scc.git] DEBUG Resetting... 2026-02-06 00:39:49,681 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-02-06 00:39:49,688 [ scc.git] DEBUG HEAD is now at 6dc6458 merge master -Dorg -Snone 2026-02-06 00:39:49,688 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-02-06 00:39:49,742 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-02-06 00:39:49,758 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-02-06 00:39:49,789 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-02-06 00:39:49,807 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-02-06 00:39:49,821 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-02-06 00:39:49,844 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-02-06 00:39:49,858 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-02-06 00:39:49,868 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-02-06 00:39:49,892 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-02-06 00:39:49,895 [ scc.git] DEBUG Check current status 2026-02-06 00:39:49,895 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-06 00:39:49,897 [ scc.git] DEBUG 6dc6458 merge master -Dorg -Snone 2026-02-06 00:39:49,897 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-06 00:39:49,940 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-06 00:39:49,942 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-06 00:39:49,945 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-06 00:39:49,948 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-06 00:39:49,951 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-02-06 00:39:49,954 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-06 00:39:49,956 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-06 00:39:49,959 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-02-06 00:39:49,962 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-06 00:39:49,965 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-06 00:39:49,967 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-06 00:39:49,970 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-06 00:39:49,973 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-06 00:39:49,975 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-06 00:39:49,978 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-06 00:39:49,981 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-06 00:39:49,983 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-06 00:39:49,986 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-06 00:39:49,988 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-06 00:39:49,991 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-06 00:39:49,994 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-06 00:39:49,997 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-02-06 00:39:49,998 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-02-06 00:39:49,998 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-02-06 00:39:49,998 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-02-06 00:39:49,998 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-02-06 00:39:49,998 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-02-06 00:39:49,998 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-02-06 00:39:49,998 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:39:50,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-02-06 00:39:50,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-02-06 00:39:50,788 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:39:51,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-02-06 00:39:51,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:39:52,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-02-06 00:39:52,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:39:52,820 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-06 00:39:53,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-02-06 00:39:53,348 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:39:53,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-02-06 00:39:54,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:39:54,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-02-06 00:39:55,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:39:55,225 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-06 00:39:55,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-02-06 00:39:55,736 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:39:56,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-02-06 00:39:56,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:39:57,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-02-06 00:39:57,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:39:57,621 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-06 00:39:57,622 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:39:57,622 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:39:57,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:39:57,624 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:39:57,626 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:39:57,626 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:39:57,629 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:39:57,632 [ scc.git] DEBUG Already up to date. 2026-02-06 00:39:57,632 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-02-06 00:39:57,917 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-06 00:39:57,917 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-02-06 00:39:57,921 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-02-06 00:39:58,179 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-06 00:39:58,179 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-02-06 00:39:58,183 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-02-06 00:39:58,440 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-06 00:39:58,440 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-02-06 00:39:58,444 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:39:58,444 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:39:58,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:39:58,447 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-06 00:39:58,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:39:58,451 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-06 00:39:58,454 [ scc.git] DEBUG Already up to date. 2026-02-06 00:39:58,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:39:58,593 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-06 00:39:58,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:39:58,598 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-06 00:39:58,600 [ scc.git] DEBUG Already up to date. 2026-02-06 00:39:58,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:39:58,990 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-06 00:39:58,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:39:58,994 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-06 00:39:58,997 [ scc.git] DEBUG Already up to date. 2026-02-06 00:39:59,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:39:59,392 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:39:59,443 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:39:59,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:39:59,445 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:39:59,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-02-06 00:39:59,833 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:39:59,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-06 00:39:59,833 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:39:59,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:39:59,836 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:39:59,838 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:39:59,838 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:39:59,841 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:39:59,843 [ scc.git] DEBUG Already up to date. 2026-02-06 00:39:59,843 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:39:59,844 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:39:59,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:39:59,846 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:39:59,884 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:39:59,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:39:59,886 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:39:59,923 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:39:59,926 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff1cc7f90> has no local changes 2026-02-06 00:39:59,926 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:39:59,931 [ scc.git] DEBUG [detached HEAD b798a59] merge master -Dorg -Ssuccess-only 2026-02-06 00:39:59,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:39:59,932 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:40:00,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-02-06 00:40:00,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-02-06 00:40:00,924 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:40:01,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-02-06 00:40:01,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:02,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:40:02,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-02-06 00:40:03,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:40:03,366 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:40:03,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-02-06 00:40:04,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-02-06 00:40:04,425 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:40:04,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-06 00:40:04,425 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:40:04,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:04,428 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:40:04,430 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:40:04,430 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:40:04,432 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:40:04,435 [ scc.git] DEBUG Already up to date. 2026-02-06 00:40:04,435 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-02-06 00:40:04,713 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-02-06 00:40:04,713 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-02-06 00:40:04,716 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:40:04,716 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:40:04,717 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:04,719 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-02-06 00:40:04,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:04,724 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-02-06 00:40:04,730 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:40:04,733 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-06 00:40:04,733 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:40:04,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:40:04,884 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:40:04,922 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:40:04,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:04,924 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:40:04,962 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:40:04,965 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff1cdc850> has no local changes 2026-02-06 00:40:04,966 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:40:04,971 [ scc.git] DEBUG [detached HEAD 111d286] merge master -Dorg -Ssuccess-only 2026-02-06 00:40:04,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:40:04,972 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:40:05,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-02-06 00:40:06,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-02-06 00:40:06,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-02-06 00:40:07,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-02-06 00:40:07,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:07,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:40:08,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-02-06 00:40:09,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:40:09,101 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-02-06 00:40:09,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-02-06 00:40:10,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-02-06 00:40:10,093 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:40:10,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-06 00:40:10,093 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:40:10,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:10,096 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:40:10,098 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:40:10,098 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:40:10,101 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:40:10,108 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-02-06 00:40:10,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-02-06 00:40:11,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-02-06 00:40:12,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-02-06 00:40:12,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-02-06 00:40:12,974 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-02-06 00:40:13,253 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-02-06 00:40:13,253 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-02-06 00:40:13,257 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:40:13,257 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:40:13,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:13,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-02-06 00:40:13,263 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:13,265 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-02-06 00:40:13,273 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-02-06 00:40:13,274 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:40:13,278 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-02-06 00:40:13,278 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-02-06 00:40:13,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:40:13,418 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:40:13,456 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:40:13,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:13,458 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:40:13,496 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:40:13,500 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff2249910> has no local changes 2026-02-06 00:40:13,500 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:40:13,505 [ scc.git] DEBUG [detached HEAD 3054a59] merge master -Dorg -Ssuccess-only 2026-02-06 00:40:13,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:40:13,506 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:40:14,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-02-06 00:40:14,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-02-06 00:40:15,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-02-06 00:40:15,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-02-06 00:40:16,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-02-06 00:40:16,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-02-06 00:40:17,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-02-06 00:40:17,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-02-06 00:40:18,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:18,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:40:19,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-02-06 00:40:19,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bb180dbb97ddc67cd2cf655d56058ba7da765769?per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:19,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769 HTTP/1.1" 200 None 2026-02-06 00:40:20,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bb180dbb97ddc67cd2cf655d56058ba7da765769/status HTTP/1.1" 200 None 2026-02-06 00:40:20,409 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-02-06 00:40:20,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-02-06 00:40:21,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-02-06 00:40:21,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-06 00:40:22,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:23,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:40:23,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-06 00:40:24,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:24,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-06 00:40:25,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-02-06 00:40:25,227 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-02-06 00:40:25,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2026-02-06 00:40:26,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2026-02-06 00:40:26,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/5aed4047c49e1cc8e8036045b09d3102237c0c30 HTTP/1.1" 200 None 2026-02-06 00:40:27,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/5aed4047c49e1cc8e8036045b09d3102237c0c30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:27,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/5aed4047c49e1cc8e8036045b09d3102237c0c30/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:40:28,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-02-06 00:40:28,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/169 HTTP/1.1" 200 None 2026-02-06 00:40:29,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-02-06 00:40:29,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-02-06 00:40:30,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-02-06 00:40:30,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-02-06 00:40:31,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-02-06 00:40:31,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-02-06 00:40:32,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-02-06 00:40:32,210 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:40:32,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-06 00:40:32,210 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:40:32,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:32,213 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:40:32,216 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:40:32,216 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:40:32,219 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:40:32,231 [ scc.git] DEBUG Updating 11d3587..9530c10 2026-02-06 00:40:32,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-02-06 00:40:33,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-02-06 00:40:34,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-02-06 00:40:35,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-02-06 00:40:36,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-02-06 00:40:36,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-02-06 00:40:37,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-02-06 00:40:38,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-02-06 00:40:39,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-02-06 00:40:39,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-02-06 00:40:40,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-02-06 00:40:40,684 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-02-06 00:40:41,067 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-06 00:40:41,067 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-02-06 00:40:41,072 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-02-06 00:40:41,325 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-06 00:40:41,325 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-02-06 00:40:41,330 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:40:41,330 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:40:41,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:41,332 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-06 00:40:41,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:41,338 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-06 00:40:41,347 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:40:41,351 [ scc.git] DEBUG README.rst | 14 ++ 2026-02-06 00:40:41,351 [ scc.git] DEBUG src/omero_zarr/cli.py | 66 +++++---- 2026-02-06 00:40:41,351 [ scc.git] DEBUG src/omero_zarr/kvp_tables.py | 82 +++++++++++ 2026-02-06 00:40:41,351 [ scc.git] DEBUG src/omero_zarr/masks.py | 46 ++++-- 2026-02-06 00:40:41,351 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 51 +++++-- 2026-02-06 00:40:41,351 [ scc.git] DEBUG src/omero_zarr/util.py | 49 ++++++- 2026-02-06 00:40:41,352 [ scc.git] DEBUG test/integration/clitest/test_export.py | 251 +++++++++++++++++++++++--------- 2026-02-06 00:40:41,352 [ scc.git] DEBUG 7 files changed, 443 insertions(+), 116 deletions(-) 2026-02-06 00:40:41,352 [ scc.git] DEBUG create mode 100644 src/omero_zarr/kvp_tables.py 2026-02-06 00:40:41,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:40:41,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-02-06 00:40:41,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:41,515 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-02-06 00:40:41,525 [ scc.git] DEBUG CONFLICT (modify/delete): CHANGELOG.md deleted in HEAD and modified in bb180dbb97ddc67cd2cf655d56058ba7da765769. Version bb180dbb97ddc67cd2cf655d56058ba7da765769 of CHANGELOG.md left in tree. 2026-02-06 00:40:41,525 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-02-06 00:40:41,525 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-02-06 00:40:41,525 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-02-06 00:40:41,525 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-02-06 00:40:41,525 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:40:41,526 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:40:41,528 [ scc.git] DEBUG Calling 'git reset --hard dd3a8ed8b468ce1d401005095ba28eac521cc59e' 2026-02-06 00:40:41,533 [ scc.git] DEBUG HEAD is now at dd3a8ed merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) 2026-02-06 00:40:41,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:40:41,907 [ scc.git] DEBUG Calling 'git merge-base 9530c10ba9823fcba6b39139987bf4bcd4a60179 bb180dbb97ddc67cd2cf655d56058ba7da765769' 2026-02-06 00:40:41,910 [ scc.git] DEBUG Calling 'git diff --name-only f7eea7cd6c149e1c5b2e4648753ac0a1f8a65dfb..9530c10ba9823fcba6b39139987bf4bcd4a60179' 2026-02-06 00:40:41,912 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - Upstream changes - CHANGELOG.md --conflicts 2026-02-06 00:40:41,914 [ scc.config] DEBUG Found github.token 2026-02-06 00:40:41,914 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-02-06 00:40:41,915 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:40:41,952 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:40:41,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:40:41,954 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:40:41,991 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:40:41,994 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff1d5c550> has no local changes 2026-02-06 00:40:41,994 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 182 will-moore 'Revert "Remove support for Plate import"' (exclude comment) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9530c10 Previously merged: - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:40:42,000 [ scc.git] DEBUG [detached HEAD 140ffc0] merge master -Dorg -Ssuccess-only 2026-02-06 00:40:42,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:40:42,001 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:40:42,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-02-06 00:40:42,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/667 HTTP/1.1" 200 None 2026-02-06 00:40:43,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b213a00cd4660418b6373d2aa5d5000939ece66e HTTP/1.1" 200 None 2026-02-06 00:40:44,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b213a00cd4660418b6373d2aa5d5000939ece66e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:44,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b213a00cd4660418b6373d2aa5d5000939ece66e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:40:45,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666 HTTP/1.1" 200 None 2026-02-06 00:40:45,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/665 HTTP/1.1" 200 None 2026-02-06 00:40:45,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/665/comments HTTP/1.1" 200 None 2026-02-06 00:40:46,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b HTTP/1.1" 200 None 2026-02-06 00:40:47,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:47,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:40:48,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b HTTP/1.1" 200 None 2026-02-06 00:40:48,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bdf45b550f4528d17eba292491bbb620ad49022b?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:40:48,459 [ scc.repo] DEBUG - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-02-06 00:40:48,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664 HTTP/1.1" 200 None 2026-02-06 00:40:49,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664/comments HTTP/1.1" 200 None 2026-02-06 00:40:49,444 [ scc.repo] DEBUG # ... Include label: include 2026-02-06 00:40:49,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea HTTP/1.1" 200 None 2026-02-06 00:40:50,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:50,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:40:51,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea HTTP/1.1" 200 None 2026-02-06 00:40:51,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ef2d52de60235379f42877477aa2088551610bea?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:40:51,910 [ scc.repo] DEBUG - PR 664 Nirkan 'Handle many channels ' 2026-02-06 00:40:52,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663 HTTP/1.1" 200 None 2026-02-06 00:40:52,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663/comments HTTP/1.1" 200 None 2026-02-06 00:40:53,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1a0bf21adfbde776ff98e417c816b68e3137f4c3 HTTP/1.1" 200 None 2026-02-06 00:40:53,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1a0bf21adfbde776ff98e417c816b68e3137f4c3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:54,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1a0bf21adfbde776ff98e417c816b68e3137f4c3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:40:54,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/1a0bf21adfbde776ff98e417c816b68e3137f4c3 HTTP/1.1" 200 None 2026-02-06 00:40:55,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/1a0bf21adfbde776ff98e417c816b68e3137f4c3?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:40:55,317 [ scc.repo] DEBUG - PR 663 will-moore 'Zarr' 2026-02-06 00:40:55,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None 2026-02-06 00:40:56,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662/comments HTTP/1.1" 200 None 2026-02-06 00:40:56,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac HTTP/1.1" 200 None 2026-02-06 00:40:57,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:40:57,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:40:58,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac HTTP/1.1" 200 None 2026-02-06 00:40:58,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/21baa4e8ba004395bd7a27d520edaa2ed4a540ac?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:40:58,615 [ scc.repo] DEBUG - PR 662 will-moore 'Export script runnable without OMERO' 2026-02-06 00:40:59,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656 HTTP/1.1" 200 None 2026-02-06 00:40:59,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656/comments HTTP/1.1" 200 None 2026-02-06 00:41:00,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d HTTP/1.1" 200 None 2026-02-06 00:41:00,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:01,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:41:01,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c7d0108c6df89255b8875924ed52e264a72e581d HTTP/1.1" 200 None 2026-02-06 00:41:01,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c7d0108c6df89255b8875924ed52e264a72e581d?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:41:01,947 [ scc.repo] DEBUG - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-02-06 00:41:02,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654 HTTP/1.1" 200 None 2026-02-06 00:41:02,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654/comments HTTP/1.1" 200 None 2026-02-06 00:41:03,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83 HTTP/1.1" 200 None 2026-02-06 00:41:03,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:04,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:41:04,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/54c30d85fccf5d11463886b86af374471c3d6c83 HTTP/1.1" 200 None 2026-02-06 00:41:05,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/54c30d85fccf5d11463886b86af374471c3d6c83?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:41:05,319 [ scc.repo] DEBUG - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-02-06 00:41:05,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-02-06 00:41:06,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-02-06 00:41:06,283 [ scc.repo] DEBUG # ... Include label: include 2026-02-06 00:41:06,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-02-06 00:41:07,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:07,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:41:08,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-02-06 00:41:08,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:41:08,679 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-02-06 00:41:09,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-02-06 00:41:09,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-02-06 00:41:09,636 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:41:09,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-06 00:41:09,636 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:41:09,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:09,639 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:41:09,642 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:41:09,642 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:41:09,646 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:41:09,682 [ scc.git] DEBUG Updating 9cc36cde..e241dc01 2026-02-06 00:41:10,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-02-06 00:41:11,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-02-06 00:41:11,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-02-06 00:41:12,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-02-06 00:41:13,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-02-06 00:41:14,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-02-06 00:41:15,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-02-06 00:41:15,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-02-06 00:41:16,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-02-06 00:41:17,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-02-06 00:41:17,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-02-06 00:41:18,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-02-06 00:41:19,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-02-06 00:41:20,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-02-06 00:41:20,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-02-06 00:41:21,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-02-06 00:41:22,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-02-06 00:41:23,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-02-06 00:41:23,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-02-06 00:41:24,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-02-06 00:41:25,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-02-06 00:41:26,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-02-06 00:41:26,398 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-02-06 00:41:26,698 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-06 00:41:26,698 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-02-06 00:41:26,702 [ scc.git] DEBUG Calling 'git fetch origin pull/654/head' 2026-02-06 00:41:26,968 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-06 00:41:26,968 [ scc.git] DEBUG * branch refs/pull/654/head -> FETCH_HEAD 2026-02-06 00:41:26,972 [ scc.git] DEBUG Calling 'git fetch origin pull/656/head' 2026-02-06 00:41:27,225 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-06 00:41:27,226 [ scc.git] DEBUG * branch refs/pull/656/head -> FETCH_HEAD 2026-02-06 00:41:27,229 [ scc.git] DEBUG Calling 'git fetch origin pull/662/head' 2026-02-06 00:41:27,492 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-06 00:41:27,492 [ scc.git] DEBUG * branch refs/pull/662/head -> FETCH_HEAD 2026-02-06 00:41:27,496 [ scc.git] DEBUG Calling 'git fetch origin pull/663/head' 2026-02-06 00:41:27,758 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-06 00:41:27,758 [ scc.git] DEBUG * branch refs/pull/663/head -> FETCH_HEAD 2026-02-06 00:41:27,761 [ scc.git] DEBUG Calling 'git fetch origin pull/664/head' 2026-02-06 00:41:28,023 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-06 00:41:28,023 [ scc.git] DEBUG * branch refs/pull/664/head -> FETCH_HEAD 2026-02-06 00:41:28,027 [ scc.git] DEBUG Calling 'git fetch origin pull/665/head' 2026-02-06 00:41:28,287 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-06 00:41:28,287 [ scc.git] DEBUG * branch refs/pull/665/head -> FETCH_HEAD 2026-02-06 00:41:28,290 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:41:28,291 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:41:28,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:28,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-02-06 00:41:28,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:28,302 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-02-06 00:41:28,327 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-06 00:41:28,327 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-06 00:41:28,327 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-06 00:41:28,328 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:41:28,332 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-02-06 00:41:28,332 [ scc.git] DEBUG src/index.html | 11 ++ 2026-02-06 00:41:28,332 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-02-06 00:41:28,333 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-02-06 00:41:28,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:41:28,476 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54c30d85fccf5d11463886b86af374471c3d6c83' 2026-02-06 00:41:28,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:28,486 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 654 (Refresh metadata button to reload channel names, pixel sizes) 54c30d85fccf5d11463886b86af374471c3d6c83' 2026-02-06 00:41:28,507 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-06 00:41:28,507 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-06 00:41:28,507 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-06 00:41:28,507 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-06 00:41:28,508 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:41:28,512 [ scc.git] DEBUG src/index.html | 5 +++ 2026-02-06 00:41:28,512 [ scc.git] DEBUG src/js/models/figure_model.js | 92 +++++++++++++++++++++++++++++++++++++++++++ 2026-02-06 00:41:28,512 [ scc.git] DEBUG src/js/models/panel_model.js | 33 ++++++++++++---- 2026-02-06 00:41:28,512 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++++ 2026-02-06 00:41:28,512 [ scc.git] DEBUG 4 files changed, 130 insertions(+), 7 deletions(-) 2026-02-06 00:41:28,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:41:28,871 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c7d0108c6df89255b8875924ed52e264a72e581d' 2026-02-06 00:41:28,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:28,879 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 656 (Option to add roi comment when adding ROI from OMERO) c7d0108c6df89255b8875924ed52e264a72e581d' 2026-02-06 00:41:28,893 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2026-02-06 00:41:28,894 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:41:28,898 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 3 +- 2026-02-06 00:41:28,898 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 68 +++++++++++++++++------- 2026-02-06 00:41:28,898 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 7 ++- 2026-02-06 00:41:28,898 [ scc.git] DEBUG 3 files changed, 56 insertions(+), 22 deletions(-) 2026-02-06 00:41:29,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:41:29,313 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...21baa4e8ba004395bd7a27d520edaa2ed4a540ac' 2026-02-06 00:41:29,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:29,320 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 662 (Export script runnable without OMERO) 21baa4e8ba004395bd7a27d520edaa2ed4a540ac' 2026-02-06 00:41:29,348 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-06 00:41:29,349 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:41:29,354 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 594 +++++++++++++++------ 2026-02-06 00:41:29,354 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pbm | Bin 0 -> 8441 bytes 2026-02-06 00:41:29,354 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pil | Bin 0 -> 5143 bytes 2026-02-06 00:41:29,354 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSans.ttf | Bin 0 -> 568896 bytes 2026-02-06 00:41:29,354 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSansBold.ttf | Bin 0 -> 359272 bytes 2026-02-06 00:41:29,354 [ scc.git] DEBUG .../pilfonts/FreeSansBoldOblique.ttf | Bin 0 -> 301188 bytes 2026-02-06 00:41:29,354 [ scc.git] DEBUG .../figure_scripts/pilfonts/FreeSansOblique.ttf | Bin 0 -> 441432 bytes 2026-02-06 00:41:29,354 [ scc.git] DEBUG 7 files changed, 434 insertions(+), 160 deletions(-) 2026-02-06 00:41:29,354 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pbm 2026-02-06 00:41:29,354 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pil 2026-02-06 00:41:29,354 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSans.ttf 2026-02-06 00:41:29,354 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBold.ttf 2026-02-06 00:41:29,354 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBoldOblique.ttf 2026-02-06 00:41:29,354 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansOblique.ttf 2026-02-06 00:41:29,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:41:29,713 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a0bf21adfbde776ff98e417c816b68e3137f4c3' 2026-02-06 00:41:29,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:29,720 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 1a0bf21adfbde776ff98e417c816b68e3137f4c3' 2026-02-06 00:41:29,754 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-06 00:41:29,754 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-06 00:41:29,754 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-06 00:41:29,754 [ scc.git] DEBUG Auto-merging src/js/views/modal_views.js 2026-02-06 00:41:29,754 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-02-06 00:41:29,755 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:41:29,762 [ scc.git] DEBUG omero_figure/views.py | 11 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG package-lock.json | 72 +++- 2026-02-06 00:41:29,763 [ scc.git] DEBUG package.json | 4 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/models/figure_model.js | 104 ++++- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/models/panel_model.js | 36 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/models/zarr_utils.js | 473 +++++++++++++++++++++ 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 3 + 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/views/chgrp_modal_view.js | 10 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/views/crop_modal_view.js | 12 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/views/info_panel_view.js | 37 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 10 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/views/lutpicker.js | 2 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/views/modal_views.js | 33 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/views/panel_view.js | 9 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/views/right_panel_view.js | 11 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 49 +-- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/js/views/util.js | 48 ++- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/templates/figure_panel.template.html | 2 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/templates/info_panel.template.html | 7 + 2026-02-06 00:41:29,763 [ scc.git] DEBUG .../modal_dialogs/crop_modal_roi.template.html | 3 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/templates/viewport_inner.template.html | 3 +- 2026-02-06 00:41:29,763 [ scc.git] DEBUG src/test.html | 25 ++ 2026-02-06 00:41:29,763 [ scc.git] DEBUG 22 files changed, 822 insertions(+), 142 deletions(-) 2026-02-06 00:41:29,763 [ scc.git] DEBUG create mode 100644 src/js/models/zarr_utils.js 2026-02-06 00:41:29,763 [ scc.git] DEBUG create mode 100644 src/test.html 2026-02-06 00:41:30,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:41:30,112 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ef2d52de60235379f42877477aa2088551610bea' 2026-02-06 00:41:30,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:30,120 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 664 (Handle many channels ) ef2d52de60235379f42877477aa2088551610bea' 2026-02-06 00:41:30,145 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-06 00:41:30,145 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-06 00:41:30,145 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-06 00:41:30,145 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js 2026-02-06 00:41:30,145 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:41:30,145 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:41:30,149 [ scc.git] DEBUG Calling 'git reset --hard 1ed7753ee54d101145a6ad1688e3b7419c8780e8' 2026-02-06 00:41:30,155 [ scc.git] DEBUG HEAD is now at 1ed7753e merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 2026-02-06 00:41:30,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:41:30,512 [ scc.git] DEBUG Calling 'git merge-base e241dc01b21d8800b6e34e087cbf7099046f68e6 ef2d52de60235379f42877477aa2088551610bea' 2026-02-06 00:41:30,516 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..e241dc01b21d8800b6e34e087cbf7099046f68e6' 2026-02-06 00:41:30,519 [ scc.git] INFO - PR 664 Nirkan 'Handle many channels ' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - PR #654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - src/js/models/panel_model.js - PR #663 will-moore 'Zarr' - src/js/models/panel_model.js - Upstream changes - src/js/models/panel_model.js --conflicts 2026-02-06 00:41:30,521 [ scc.config] DEBUG Found github.token 2026-02-06 00:41:30,521 [ scc.git] DEBUG Not adding comment to issue #664, already --conflicts. 2026-02-06 00:41:30,521 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-06 00:41:30,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:30,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 665 (Ensure projection parameters are within bounds in loadJSON and setID) bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-06 00:41:30,545 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-06 00:41:30,545 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/figure_model.js 2026-02-06 00:41:30,545 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-06 00:41:30,546 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js 2026-02-06 00:41:30,546 [ scc.git] DEBUG Auto-merging src/js/views/util.js 2026-02-06 00:41:30,546 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:41:30,546 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:41:30,550 [ scc.git] DEBUG Calling 'git reset --hard 1ed7753ee54d101145a6ad1688e3b7419c8780e8' 2026-02-06 00:41:30,556 [ scc.git] DEBUG HEAD is now at 1ed7753e merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 2026-02-06 00:41:30,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:41:30,908 [ scc.git] DEBUG Calling 'git merge-base e241dc01b21d8800b6e34e087cbf7099046f68e6 bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-06 00:41:30,912 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..e241dc01b21d8800b6e34e087cbf7099046f68e6' 2026-02-06 00:41:30,915 [ scc.git] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - PR #654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - src/js/models/panel_model.js - src/js/models/figure_model.js - PR #663 will-moore 'Zarr' - src/js/models/panel_model.js - src/js/models/figure_model.js - PR #664 Nirkan 'Handle many channels ' - src/js/models/panel_model.js - Upstream changes - src/js/models/panel_model.js - src/js/models/figure_model.js --conflicts 2026-02-06 00:41:30,917 [ scc.config] DEBUG Found github.token 2026-02-06 00:41:30,917 [ scc.git] DEBUG Not adding comment to issue #665, already --conflicts. 2026-02-06 00:41:30,917 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:41:30,954 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:41:30,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:30,957 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:41:30,993 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:41:30,998 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff1d683d0> has no local changes 2026-02-06 00:41:30,998 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 667 Tom-TBT 'Label suggestion interface' (status: failure) - PR 666 will-moore 'Standalone app' (stage: draft) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..e241dc01 Previously merged: - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 662 will-moore 'Export script runnable without OMERO' - PR 663 will-moore 'Zarr' Conflicting PRs (not included): - PR 664 Nirkan 'Handle many channels ' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:41:31,006 [ scc.git] DEBUG [detached HEAD 5cca6878] merge master -Dorg -Ssuccess-only 2026-02-06 00:41:31,006 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:41:31,006 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:41:31,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-02-06 00:41:31,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-02-06 00:41:31,931 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:41:32,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-02-06 00:41:33,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:33,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:41:34,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-02-06 00:41:34,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:41:34,574 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:41:35,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-02-06 00:41:35,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-02-06 00:41:36,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-02-06 00:41:36,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:37,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-02-06 00:41:37,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:41:37,513 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-02-06 00:41:37,513 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:41:37,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-06 00:41:37,513 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:41:37,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:37,516 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:41:37,518 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:41:37,518 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:41:37,521 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:41:37,524 [ scc.git] DEBUG Already up to date. 2026-02-06 00:41:37,524 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-02-06 00:41:37,795 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-02-06 00:41:37,796 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-02-06 00:41:37,799 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-02-06 00:41:38,053 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-02-06 00:41:38,053 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-02-06 00:41:38,057 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:41:38,057 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:41:38,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:38,059 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-02-06 00:41:38,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:38,064 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-02-06 00:41:38,071 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-02-06 00:41:38,071 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:41:38,074 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-02-06 00:41:38,074 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-02-06 00:41:38,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:41:38,222 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-02-06 00:41:38,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:38,227 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-02-06 00:41:38,234 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:41:38,237 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-06 00:41:38,237 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:41:38,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:41:38,622 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:41:38,659 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:41:38,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:41:38,661 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:41:38,697 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:41:38,700 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff1d846d0> has no local changes 2026-02-06 00:41:38,701 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:41:38,706 [ scc.git] DEBUG [detached HEAD 4724710] merge master -Dorg -Ssuccess-only 2026-02-06 00:41:38,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:41:38,707 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:41:39,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-02-06 00:41:39,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-02-06 00:41:40,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-02-06 00:41:40,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-02-06 00:41:40,734 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:41:41,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-02-06 00:41:41,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:42,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:41:43,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-02-06 00:41:43,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:41:43,544 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-02-06 00:41:44,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-02-06 00:41:44,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-02-06 00:41:44,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-02-06 00:41:44,978 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:41:45,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-02-06 00:41:46,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:46,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-02-06 00:41:47,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:41:47,242 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-02-06 00:41:47,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-02-06 00:41:47,742 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:41:48,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-02-06 00:41:48,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:49,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-02-06 00:41:49,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:41:49,723 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-02-06 00:41:50,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-02-06 00:41:50,231 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:41:50,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-02-06 00:41:51,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:51,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-02-06 00:41:52,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:41:52,219 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-02-06 00:41:52,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-02-06 00:41:53,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-02-06 00:41:53,198 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:41:53,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-02-06 00:41:54,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:54,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-02-06 00:41:55,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:41:55,261 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-02-06 00:41:55,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-02-06 00:41:55,741 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:41:56,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-02-06 00:41:56,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:57,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-02-06 00:41:57,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:41:57,870 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-02-06 00:41:58,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-02-06 00:41:58,334 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:41:58,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-02-06 00:41:59,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:41:59,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-02-06 00:42:00,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:00,406 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-02-06 00:42:00,407 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:42:00,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-06 00:42:00,407 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:42:00,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:00,410 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:42:00,412 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:42:00,412 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:42:00,415 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:42:00,418 [ scc.git] DEBUG Already up to date. 2026-02-06 00:42:00,418 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-02-06 00:42:00,683 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-06 00:42:00,683 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-02-06 00:42:00,687 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-02-06 00:42:00,939 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-06 00:42:00,939 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-02-06 00:42:00,943 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-02-06 00:42:01,202 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-06 00:42:01,202 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-02-06 00:42:01,206 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-02-06 00:42:01,512 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-06 00:42:01,512 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-02-06 00:42:01,515 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-02-06 00:42:01,942 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-06 00:42:01,942 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-02-06 00:42:01,945 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-02-06 00:42:02,205 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-06 00:42:02,205 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-02-06 00:42:02,209 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-02-06 00:42:02,456 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-06 00:42:02,456 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-02-06 00:42:02,460 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:42:02,460 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:42:02,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:02,462 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-02-06 00:42:02,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:02,467 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-02-06 00:42:02,475 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:02,479 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-02-06 00:42:02,479 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-02-06 00:42:02,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:02,630 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-02-06 00:42:02,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:02,635 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-02-06 00:42:02,650 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-06 00:42:02,650 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:02,655 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-02-06 00:42:02,655 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-02-06 00:42:03,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:03,015 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-06 00:42:03,017 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:03,020 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-06 00:42:03,034 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-06 00:42:03,034 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-06 00:42:03,034 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:42:03,035 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:42:03,037 [ scc.git] DEBUG Calling 'git reset --hard 564ff0732088ad32e254422a1b11f66f84935147' 2026-02-06 00:42:03,042 [ scc.git] DEBUG HEAD is now at 564ff07 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-02-06 00:42:03,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:03,423 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-06 00:42:03,425 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-06 00:42:03,428 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-02-06 00:42:03,430 [ scc.config] DEBUG Found github.token 2026-02-06 00:42:03,430 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-02-06 00:42:03,430 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-02-06 00:42:03,433 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:03,435 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-02-06 00:42:03,450 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-06 00:42:03,451 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:03,456 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-02-06 00:42:03,456 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-02-06 00:42:03,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:03,821 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-02-06 00:42:03,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:03,826 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-02-06 00:42:03,840 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-06 00:42:03,841 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:03,846 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-02-06 00:42:03,846 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-02-06 00:42:04,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:04,370 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-06 00:42:04,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:04,376 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-06 00:42:04,391 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-06 00:42:04,391 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-06 00:42:04,391 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:42:04,391 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:42:04,394 [ scc.git] DEBUG Calling 'git reset --hard b6678db53ebf9ccc208d13d3b0c91bfc843cfdbe' 2026-02-06 00:42:04,398 [ scc.git] DEBUG HEAD is now at b6678db merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-02-06 00:42:04,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:04,768 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-06 00:42:04,771 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-06 00:42:04,774 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-02-06 00:42:04,776 [ scc.config] DEBUG Found github.token 2026-02-06 00:42:04,776 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-02-06 00:42:04,776 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-06 00:42:04,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:04,781 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-06 00:42:04,800 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-06 00:42:04,800 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-06 00:42:04,800 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:42:04,801 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:42:04,803 [ scc.git] DEBUG Calling 'git reset --hard b6678db53ebf9ccc208d13d3b0c91bfc843cfdbe' 2026-02-06 00:42:04,808 [ scc.git] DEBUG HEAD is now at b6678db merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-02-06 00:42:05,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:05,167 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-06 00:42:05,170 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-06 00:42:05,172 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-02-06 00:42:05,174 [ scc.config] DEBUG Found github.token 2026-02-06 00:42:05,175 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-02-06 00:42:05,175 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:42:05,211 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:42:05,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:05,213 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:42:05,250 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:42:05,254 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff03b4810> has no local changes 2026-02-06 00:42:05,254 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:42:05,260 [ scc.git] DEBUG [detached HEAD 638917e] merge master -Dorg -Ssuccess-only 2026-02-06 00:42:05,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:42:05,260 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:42:05,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-02-06 00:42:06,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-02-06 00:42:07,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-02-06 00:42:07,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:07,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:42:08,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-02-06 00:42:08,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:08,879 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-02-06 00:42:09,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-02-06 00:42:09,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-02-06 00:42:10,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:10,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:42:11,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-02-06 00:42:11,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:11,855 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-02-06 00:42:12,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-02-06 00:42:12,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-02-06 00:42:13,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-02-06 00:42:13,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-02-06 00:42:14,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2026-02-06 00:42:14,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2026-02-06 00:42:14,989 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:42:15,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-02-06 00:42:16,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:16,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:42:17,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-02-06 00:42:17,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:17,620 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-02-06 00:42:18,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2026-02-06 00:42:18,105 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:42:18,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-02-06 00:42:19,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:19,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:42:20,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-02-06 00:42:20,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:20,783 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-02-06 00:42:21,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-02-06 00:42:21,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-02-06 00:42:22,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-02-06 00:42:22,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-02-06 00:42:23,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-02-06 00:42:23,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:24,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-02-06 00:42:24,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:24,669 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-02-06 00:42:25,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-02-06 00:42:25,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-02-06 00:42:26,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-02-06 00:42:26,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:27,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-02-06 00:42:27,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:27,497 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-02-06 00:42:27,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-02-06 00:42:28,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-02-06 00:42:28,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-02-06 00:42:29,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:30,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-02-06 00:42:30,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:30,546 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-02-06 00:42:31,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-02-06 00:42:31,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-02-06 00:42:32,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-02-06 00:42:32,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:33,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:42:33,166 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:42:33,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-06 00:42:33,166 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:42:33,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:33,169 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:42:33,171 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:42:33,171 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:42:33,174 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:42:33,181 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-02-06 00:42:33,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-02-06 00:42:34,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-02-06 00:42:34,558 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-02-06 00:42:34,850 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-06 00:42:34,850 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-02-06 00:42:34,854 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-02-06 00:42:35,113 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-06 00:42:35,113 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-02-06 00:42:35,117 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-02-06 00:42:35,369 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-06 00:42:35,369 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-02-06 00:42:35,373 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2026-02-06 00:42:35,624 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-06 00:42:35,624 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2026-02-06 00:42:35,628 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2026-02-06 00:42:35,889 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-06 00:42:35,889 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2026-02-06 00:42:35,892 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-02-06 00:42:36,152 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-06 00:42:36,152 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-02-06 00:42:36,156 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-02-06 00:42:36,418 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-06 00:42:36,418 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-02-06 00:42:36,422 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:42:36,422 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:42:36,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:36,424 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-02-06 00:42:36,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:36,430 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-02-06 00:42:36,440 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-02-06 00:42:36,440 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-02-06 00:42:36,441 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:36,444 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-02-06 00:42:36,445 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-02-06 00:42:36,445 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-02-06 00:42:36,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:36,605 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-02-06 00:42:36,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:36,611 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-02-06 00:42:36,626 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-02-06 00:42:36,626 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-02-06 00:42:36,626 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-02-06 00:42:36,626 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-02-06 00:42:36,627 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:36,631 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-02-06 00:42:36,631 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-02-06 00:42:36,631 [ scc.git] DEBUG src/app/header.html | 5 + 2026-02-06 00:42:36,631 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-02-06 00:42:36,631 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-02-06 00:42:36,631 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-02-06 00:42:36,631 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-02-06 00:42:36,631 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-02-06 00:42:37,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:37,004 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-02-06 00:42:37,008 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:37,010 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-02-06 00:42:37,020 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-02-06 00:42:37,021 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:37,024 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-02-06 00:42:37,024 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-02-06 00:42:37,024 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-02-06 00:42:37,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:37,397 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-02-06 00:42:37,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:37,404 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-02-06 00:42:37,422 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:37,430 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2026-02-06 00:42:37,430 [ scc.git] DEBUG package.json | 2 +- 2026-02-06 00:42:37,430 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2026-02-06 00:42:37,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:37,844 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-06 00:42:37,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:37,851 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-06 00:42:37,887 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-06 00:42:37,887 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-06 00:42:37,887 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:42:37,888 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:42:37,891 [ scc.git] DEBUG Calling 'git reset --hard e472e045f3547ef2e9cc16321afd395d333d38e2' 2026-02-06 00:42:37,903 [ scc.git] DEBUG HEAD is now at e472e04 merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2026-02-06 00:42:38,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:38,407 [ scc.git] DEBUG Calling 'git merge-base 5e2de43ad401fb00690a79644056e0ac15fabfd5 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-06 00:42:38,410 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..5e2de43ad401fb00690a79644056e0ac15fabfd5' 2026-02-06 00:42:38,413 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2026-02-06 00:42:38,415 [ scc.config] DEBUG Found github.token 2026-02-06 00:42:38,415 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2026-02-06 00:42:38,415 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-02-06 00:42:38,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:38,421 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-02-06 00:42:38,433 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:38,436 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-02-06 00:42:38,436 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-02-06 00:42:38,436 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-02-06 00:42:38,436 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-02-06 00:42:38,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:38,817 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-02-06 00:42:38,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:38,823 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-02-06 00:42:38,831 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-02-06 00:42:38,832 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:38,835 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-02-06 00:42:38,835 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-02-06 00:42:39,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:39,218 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:42:39,256 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:42:39,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:39,259 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:42:39,297 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:42:39,301 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff03d8510> has no local changes 2026-02-06 00:42:39,301 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:42:39,307 [ scc.git] DEBUG [detached HEAD a1b0046] merge master -Dorg -Ssuccess-only 2026-02-06 00:42:39,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:42:39,307 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:42:39,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-02-06 00:42:40,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-02-06 00:42:40,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-02-06 00:42:40,733 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:42:41,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-02-06 00:42:41,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:42,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:42:43,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-02-06 00:42:43,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:43,430 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:42:43,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-02-06 00:42:44,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-02-06 00:42:44,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:45,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-02-06 00:42:45,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:45,733 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-06 00:42:46,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-02-06 00:42:46,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-02-06 00:42:47,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-02-06 00:42:47,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:48,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-02-06 00:42:48,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:48,594 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-02-06 00:42:48,595 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:42:48,595 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-06 00:42:48,595 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:42:48,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:48,597 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:42:48,600 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:42:48,600 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:42:48,602 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:42:48,605 [ scc.git] DEBUG Already up to date. 2026-02-06 00:42:48,605 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-02-06 00:42:48,875 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-06 00:42:48,875 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-02-06 00:42:48,879 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-02-06 00:42:49,136 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-06 00:42:49,136 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-02-06 00:42:49,140 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-02-06 00:42:49,398 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-06 00:42:49,398 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-02-06 00:42:49,402 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:42:49,402 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:42:49,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:49,404 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-02-06 00:42:49,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:49,410 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-02-06 00:42:49,417 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:49,420 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-02-06 00:42:49,420 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-02-06 00:42:49,420 [ scc.git] DEBUG requirements.txt | 2 +- 2026-02-06 00:42:49,420 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-02-06 00:42:49,420 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-02-06 00:42:49,420 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-02-06 00:42:49,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:49,564 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-02-06 00:42:49,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:49,569 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-02-06 00:42:49,576 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:42:49,579 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-06 00:42:49,579 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:42:49,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:49,978 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-06 00:42:49,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:49,984 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-06 00:42:49,990 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-02-06 00:42:49,990 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-02-06 00:42:49,991 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:42:49,991 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:42:49,993 [ scc.git] DEBUG Calling 'git reset --hard 2a9ee7e5c3bce75853aca5d8c86301d5d3f5a0cd' 2026-02-06 00:42:49,997 [ scc.git] DEBUG HEAD is now at 2a9ee7e merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-02-06 00:42:50,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:42:50,380 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-06 00:42:50,382 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-02-06 00:42:50,385 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-02-06 00:42:50,387 [ scc.config] DEBUG Found github.token 2026-02-06 00:42:50,387 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-02-06 00:42:50,387 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:42:50,426 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:42:50,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:50,428 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:42:50,466 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:42:50,469 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff1db1e90> has no local changes 2026-02-06 00:42:50,469 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:42:50,475 [ scc.git] DEBUG [detached HEAD e77cd4f] merge master -Dorg -Ssuccess-only 2026-02-06 00:42:50,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:42:50,475 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:42:50,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-02-06 00:42:51,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-02-06 00:42:51,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-02-06 00:42:52,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-02-06 00:42:52,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:53,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-02-06 00:42:53,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:53,762 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-02-06 00:42:54,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-02-06 00:42:54,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-02-06 00:42:55,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-02-06 00:42:55,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:56,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-02-06 00:42:56,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:56,603 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-02-06 00:42:57,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-02-06 00:42:57,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-02-06 00:42:58,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-02-06 00:42:58,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:42:59,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-02-06 00:42:59,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:42:59,605 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-02-06 00:42:59,605 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:42:59,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-06 00:42:59,605 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:42:59,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:42:59,608 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:42:59,610 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:42:59,610 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:42:59,613 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:42:59,619 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-02-06 00:43:00,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-02-06 00:43:00,366 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-02-06 00:43:00,647 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-06 00:43:00,647 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-02-06 00:43:00,651 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-02-06 00:43:00,912 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-06 00:43:00,913 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-02-06 00:43:00,916 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-02-06 00:43:01,176 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-06 00:43:01,176 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-02-06 00:43:01,181 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:43:01,181 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:01,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:01,183 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-06 00:43:01,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:01,189 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-06 00:43:01,201 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-02-06 00:43:01,201 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-02-06 00:43:01,201 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-02-06 00:43:01,201 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-02-06 00:43:01,201 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:43:01,202 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:43:01,204 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-06 00:43:01,208 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-06 00:43:01,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:01,362 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-06 00:43:01,366 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-06 00:43:01,369 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-02-06 00:43:01,371 [ scc.config] DEBUG Found github.token 2026-02-06 00:43:01,371 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-02-06 00:43:01,371 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-06 00:43:01,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:01,377 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-06 00:43:01,391 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-02-06 00:43:01,391 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-02-06 00:43:01,391 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-02-06 00:43:01,391 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:43:01,391 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:43:01,394 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-06 00:43:01,399 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-06 00:43:01,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:01,762 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-06 00:43:01,766 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-06 00:43:01,768 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-02-06 00:43:01,770 [ scc.config] DEBUG Found github.token 2026-02-06 00:43:01,770 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-02-06 00:43:01,770 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-02-06 00:43:01,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:01,775 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-02-06 00:43:01,783 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:43:01,787 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-02-06 00:43:01,787 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-02-06 00:43:02,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:02,165 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:43:02,204 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:02,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:02,206 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:43:02,243 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:43:02,247 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff0399f10> has no local changes 2026-02-06 00:43:02,247 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:43:02,253 [ scc.git] DEBUG [detached HEAD b0f3f67] merge master -Dorg -Ssuccess-only 2026-02-06 00:43:02,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:43:02,253 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:43:02,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-02-06 00:43:03,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-02-06 00:43:03,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-02-06 00:43:04,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:04,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:43:05,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-02-06 00:43:05,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:43:05,890 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-06 00:43:06,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-02-06 00:43:06,394 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:43:06,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-02-06 00:43:07,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:07,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:43:08,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-02-06 00:43:08,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:43:08,924 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-02-06 00:43:09,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-02-06 00:43:09,426 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:43:09,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-02-06 00:43:10,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:10,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:43:11,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-02-06 00:43:11,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:43:11,943 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-02-06 00:43:12,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-02-06 00:43:12,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-02-06 00:43:13,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-02-06 00:43:13,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-02-06 00:43:14,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-02-06 00:43:14,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-02-06 00:43:15,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-02-06 00:43:15,280 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:43:15,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-06 00:43:15,280 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:15,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:15,283 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:43:15,285 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:43:15,285 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:43:15,288 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:43:15,291 [ scc.git] DEBUG Already up to date. 2026-02-06 00:43:15,291 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-02-06 00:43:15,573 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-06 00:43:15,573 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-02-06 00:43:15,577 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-02-06 00:43:15,833 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-06 00:43:15,833 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-02-06 00:43:15,836 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-02-06 00:43:16,095 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-06 00:43:16,095 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-02-06 00:43:16,099 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:43:16,099 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:16,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:16,101 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-02-06 00:43:16,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:16,106 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-02-06 00:43:16,112 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:43:16,115 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-02-06 00:43:16,116 [ scc.git] DEBUG package.json | 2 +- 2026-02-06 00:43:16,116 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-02-06 00:43:16,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:16,268 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-02-06 00:43:16,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:16,272 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-02-06 00:43:16,282 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-06 00:43:16,282 [ scc.git] DEBUG Auto-merging package.json 2026-02-06 00:43:16,282 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:43:16,285 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-02-06 00:43:16,285 [ scc.git] DEBUG package.json | 2 +- 2026-02-06 00:43:16,285 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-02-06 00:43:16,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:16,711 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-02-06 00:43:16,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:16,716 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-02-06 00:43:16,723 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:43:16,726 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-06 00:43:16,726 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:43:17,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:17,120 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:43:17,159 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:17,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:17,161 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:43:17,198 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:43:17,202 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff1d80e10> has no local changes 2026-02-06 00:43:17,202 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:43:17,208 [ scc.git] DEBUG [detached HEAD 97415a1] merge master -Dorg -Ssuccess-only 2026-02-06 00:43:17,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:43:17,208 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:43:17,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-02-06 00:43:18,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-02-06 00:43:18,173 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:43:18,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-02-06 00:43:19,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:19,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:43:20,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-02-06 00:43:20,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:43:20,808 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:43:20,808 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:43:20,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-06 00:43:20,808 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:20,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:20,811 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:43:20,813 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:43:20,813 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:43:20,816 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:43:20,818 [ scc.git] DEBUG Already up to date. 2026-02-06 00:43:20,818 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-02-06 00:43:21,102 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-02-06 00:43:21,102 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-02-06 00:43:21,106 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:43:21,106 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:21,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:21,109 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-02-06 00:43:21,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:21,113 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-02-06 00:43:21,120 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:43:21,122 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-06 00:43:21,122 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:43:21,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:21,276 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:43:21,313 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:21,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:21,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:43:21,351 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:43:21,354 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff03a9610> has no local changes 2026-02-06 00:43:21,354 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:43:21,360 [ scc.git] DEBUG [detached HEAD de12384] merge master -Dorg -Ssuccess-only 2026-02-06 00:43:21,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:43:21,360 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:43:21,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-02-06 00:43:22,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-02-06 00:43:22,338 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:43:22,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-06 00:43:23,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:23,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:43:24,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-06 00:43:24,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:25,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-06 00:43:25,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-02-06 00:43:25,910 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:43:26,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2026-02-06 00:43:26,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2026-02-06 00:43:27,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-06 00:43:27,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:28,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:43:28,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-06 00:43:29,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:29,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-06 00:43:30,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2026-02-06 00:43:30,298 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2026-02-06 00:43:30,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-02-06 00:43:30,814 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:43:30,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-06 00:43:30,814 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:30,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:30,817 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:43:30,819 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:43:30,819 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:43:30,822 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:43:30,825 [ scc.git] DEBUG Already up to date. 2026-02-06 00:43:30,825 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2026-02-06 00:43:31,093 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-02-06 00:43:31,093 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2026-02-06 00:43:31,098 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-02-06 00:43:31,355 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-02-06 00:43:31,355 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-02-06 00:43:31,359 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:43:31,359 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:31,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:31,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2026-02-06 00:43:31,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:31,367 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2026-02-06 00:43:31,374 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:43:31,377 [ scc.git] DEBUG setup.py | 4 +- 2026-02-06 00:43:31,377 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2026-02-06 00:43:31,377 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2026-02-06 00:43:31,377 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2026-02-06 00:43:31,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:31,522 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-02-06 00:43:31,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:31,527 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-02-06 00:43:31,533 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:43:31,536 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-06 00:43:31,536 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:43:31,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:31,921 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:43:31,959 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:31,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:31,961 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:43:31,998 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:43:32,001 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff03ef3d0> has no local changes 2026-02-06 00:43:32,001 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:43:32,007 [ scc.git] DEBUG [detached HEAD ced4bd0] merge master -Dorg -Ssuccess-only 2026-02-06 00:43:32,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:43:32,007 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:43:32,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-02-06 00:43:33,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-02-06 00:43:33,005 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:43:33,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-02-06 00:43:34,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:34,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:43:35,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-02-06 00:43:35,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:43:35,551 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:43:36,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-02-06 00:43:36,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-02-06 00:43:37,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-02-06 00:43:37,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:37,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-02-06 00:43:38,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:43:38,427 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-02-06 00:43:38,427 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:43:38,427 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-06 00:43:38,427 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:38,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:38,429 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:43:38,432 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:43:38,432 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:43:38,434 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:43:38,438 [ scc.git] DEBUG Already up to date. 2026-02-06 00:43:38,438 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-02-06 00:43:38,723 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-02-06 00:43:38,723 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-02-06 00:43:38,727 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-02-06 00:43:38,985 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-02-06 00:43:38,985 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-02-06 00:43:38,989 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:43:38,989 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:38,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:38,991 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-06 00:43:38,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:38,996 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-06 00:43:39,004 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-02-06 00:43:39,004 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-02-06 00:43:39,004 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-02-06 00:43:39,004 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-02-06 00:43:39,004 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-02-06 00:43:39,004 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-02-06 00:43:39,004 [ scc.git] DEBUG Auto-merging setup.py 2026-02-06 00:43:39,004 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-02-06 00:43:39,004 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:43:39,004 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:43:39,007 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-02-06 00:43:39,011 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-02-06 00:43:39,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:39,158 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-06 00:43:39,161 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-02-06 00:43:39,164 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py - setup.py --conflicts 2026-02-06 00:43:39,166 [ scc.config] DEBUG Found github.token 2026-02-06 00:43:39,166 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-02-06 00:43:39,166 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-02-06 00:43:39,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:39,170 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-02-06 00:43:39,176 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:43:39,179 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-06 00:43:39,179 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:43:39,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:39,564 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:43:39,601 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:39,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:39,603 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:43:39,639 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:43:39,642 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff0403c50> has no local changes 2026-02-06 00:43:39,642 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:43:39,648 [ scc.git] DEBUG [detached HEAD 18c8ff8] merge master -Dorg -Ssuccess-only 2026-02-06 00:43:39,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:43:39,648 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:43:40,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-02-06 00:43:40,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-02-06 00:43:41,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-02-06 00:43:41,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-02-06 00:43:42,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-02-06 00:43:42,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:43,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:43:43,089 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:43:43,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-06 00:43:43,089 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:43,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:43,092 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:43:43,094 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:43:43,094 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:43:43,097 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:43:43,103 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-02-06 00:43:43,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-02-06 00:43:44,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-02-06 00:43:45,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-02-06 00:43:45,209 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:43:45,209 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:45,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:45,211 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:43:45,248 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:45,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:45,250 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:43:45,287 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:43:45,290 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff0419850> has no local changes 2026-02-06 00:43:45,290 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:43:45,296 [ scc.git] DEBUG [detached HEAD 15f8fac] merge master -Dorg -Ssuccess-only 2026-02-06 00:43:45,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:43:45,296 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:43:45,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-02-06 00:43:46,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-02-06 00:43:46,176 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:43:46,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-02-06 00:43:47,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:47,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:43:48,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-02-06 00:43:48,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:43:48,682 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:43:48,682 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:43:48,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-06 00:43:48,682 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:48,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:48,685 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:43:48,687 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:43:48,687 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:43:48,690 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:43:48,693 [ scc.git] DEBUG Already up to date. 2026-02-06 00:43:48,693 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-02-06 00:43:48,966 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-02-06 00:43:48,967 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-02-06 00:43:48,970 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:43:48,970 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:48,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:48,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-02-06 00:43:48,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:48,977 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-02-06 00:43:48,983 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:43:48,986 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-06 00:43:48,986 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:43:49,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:49,162 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:43:49,199 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:49,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:49,201 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:43:49,238 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:43:49,241 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff03cc1d0> has no local changes 2026-02-06 00:43:49,241 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:43:49,247 [ scc.git] DEBUG [detached HEAD 98ef511] merge master -Dorg -Ssuccess-only 2026-02-06 00:43:49,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:43:49,247 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:43:49,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-02-06 00:43:50,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-02-06 00:43:50,260 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:43:50,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-02-06 00:43:51,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:51,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:43:52,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-02-06 00:43:52,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:43:52,953 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:43:52,953 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:43:52,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-06 00:43:52,954 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:52,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:52,956 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:43:52,958 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:43:52,958 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:43:52,961 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:43:52,967 [ scc.git] DEBUG Updating deab817..160d894 2026-02-06 00:43:53,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-02-06 00:43:53,703 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-02-06 00:43:53,974 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-02-06 00:43:53,974 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-02-06 00:43:53,978 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:43:53,978 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:53,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:53,980 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-02-06 00:43:53,983 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:53,985 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-02-06 00:43:53,991 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:43:53,993 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-06 00:43:53,993 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:43:54,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:43:54,150 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:43:54,188 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:43:54,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:43:54,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:43:54,226 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:43:54,229 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff1de5690> has no local changes 2026-02-06 00:43:54,229 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:43:54,234 [ scc.git] DEBUG [detached HEAD 3fec08c] merge master -Dorg -Ssuccess-only 2026-02-06 00:43:54,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:43:54,234 [ scc.git] INFO Overriding base-branch from master to main 2026-02-06 00:43:54,234 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:43:54,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-02-06 00:43:55,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-02-06 00:43:55,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-02-06 00:43:56,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-02-06 00:43:56,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:43:57,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:43:57,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-02-06 00:43:58,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:43:58,189 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-02-06 00:43:58,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-02-06 00:43:59,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-02-06 00:43:59,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-02-06 00:44:00,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-02-06 00:44:00,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:44:01,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-02-06 00:44:01,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:44:01,551 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-02-06 00:44:01,551 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:44:01,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-06 00:44:01,551 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:01,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:01,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-02-06 00:44:01,556 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:44:01,556 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-02-06 00:44:01,559 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-02-06 00:44:01,566 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-02-06 00:44:02,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-02-06 00:44:02,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-02-06 00:44:03,071 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-02-06 00:44:03,359 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-02-06 00:44:03,359 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-02-06 00:44:03,364 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-02-06 00:44:03,626 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-02-06 00:44:03,626 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-02-06 00:44:03,630 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:44:03,630 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:03,630 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:03,632 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-06 00:44:03,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:03,637 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-06 00:44:03,644 [ scc.git] DEBUG Auto-merging README.rst 2026-02-06 00:44:03,644 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-02-06 00:44:03,644 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-02-06 00:44:03,644 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-02-06 00:44:03,645 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-06 00:44:03,645 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-06 00:44:03,647 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-02-06 00:44:03,651 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-02-06 00:44:03,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:03,817 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-06 00:44:03,819 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-02-06 00:44:03,822 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#47](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-02-06 00:44:03,824 [ scc.config] DEBUG Found github.token 2026-02-06 00:44:03,824 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-02-06 00:44:03,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-02-06 00:44:03,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:03,829 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-02-06 00:44:03,836 [ scc.git] DEBUG Auto-merging README.rst 2026-02-06 00:44:03,836 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-02-06 00:44:03,837 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:44:03,840 [ scc.git] DEBUG README.rst | 3 + 2026-02-06 00:44:03,840 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-02-06 00:44:03,840 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-02-06 00:44:03,840 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-02-06 00:44:03,840 [ scc.git] DEBUG setup.py | 5 +- 2026-02-06 00:44:03,840 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-02-06 00:44:03,840 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-02-06 00:44:04,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:04,213 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:44:04,250 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:04,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:04,252 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:44:04,288 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:44:04,291 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff0455310> has no local changes 2026-02-06 00:44:04,291 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:44:04,297 [ scc.git] DEBUG [detached HEAD 721e2aa] merge master -Dorg -Ssuccess-only 2026-02-06 00:44:04,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:04,298 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:44:04,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-02-06 00:44:05,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-02-06 00:44:05,224 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:44:05,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-02-06 00:44:06,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:44:06,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:44:07,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-02-06 00:44:07,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:44:07,824 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:07,824 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:44:07,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-06 00:44:07,824 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:07,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:07,827 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:44:07,829 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:44:07,829 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:44:07,832 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:44:07,834 [ scc.git] DEBUG Already up to date. 2026-02-06 00:44:07,835 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-02-06 00:44:08,106 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-02-06 00:44:08,106 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-02-06 00:44:08,111 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:44:08,111 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:08,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:08,113 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-02-06 00:44:08,116 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:08,118 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-02-06 00:44:08,123 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:44:08,126 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-06 00:44:08,126 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:44:08,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:08,295 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:44:08,334 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:08,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:08,336 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:44:08,372 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:44:08,375 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff039f850> has no local changes 2026-02-06 00:44:08,375 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:44:08,380 [ scc.git] DEBUG [detached HEAD 02e1627] merge master -Dorg -Ssuccess-only 2026-02-06 00:44:08,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:08,380 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:44:08,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-02-06 00:44:09,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-02-06 00:44:09,288 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-06 00:44:09,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-02-06 00:44:10,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-06 00:44:10,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-06 00:44:11,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-02-06 00:44:11,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-02-06 00:44:11,891 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:11,891 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:44:11,891 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-06 00:44:11,891 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:11,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:11,894 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:44:11,896 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:44:11,896 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:44:11,899 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:44:11,901 [ scc.git] DEBUG Already up to date. 2026-02-06 00:44:11,902 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-02-06 00:44:12,178 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-02-06 00:44:12,179 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-02-06 00:44:12,183 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:44:12,183 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:12,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:12,185 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-02-06 00:44:12,187 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:12,189 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-02-06 00:44:12,196 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-06 00:44:12,198 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-06 00:44:12,198 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-06 00:44:12,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:12,371 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:44:12,407 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:12,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:12,409 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:44:12,445 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:44:12,448 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff0459390> has no local changes 2026-02-06 00:44:12,448 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:44:12,454 [ scc.git] DEBUG [detached HEAD acc0c76] merge master -Dorg -Ssuccess-only 2026-02-06 00:44:12,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:12,455 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:44:12,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-02-06 00:44:12,792 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:44:12,792 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-06 00:44:12,792 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:12,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:12,794 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-06 00:44:12,796 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:44:12,796 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-06 00:44:12,799 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-06 00:44:12,801 [ scc.git] DEBUG Already up to date. 2026-02-06 00:44:12,801 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:44:12,802 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:12,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:12,804 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:44:12,840 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:12,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:12,842 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:44:12,878 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:44:12,881 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff0258a50> has no local changes 2026-02-06 00:44:12,881 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:44:12,887 [ scc.git] DEBUG [detached HEAD b769034] merge master -Dorg -Ssuccess-only 2026-02-06 00:44:12,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:12,887 [ scc.git] INFO Overriding base-branch from master to develop 2026-02-06 00:44:12,887 [ scc.repo] DEBUG ## PRs found: 2026-02-06 00:44:13,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-02-06 00:44:13,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2026-02-06 00:44:14,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2026-02-06 00:44:14,369 [ scc.repo] DEBUG ## Branches found: 2026-02-06 00:44:14,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-06 00:44:14,369 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:14,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:14,372 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-02-06 00:44:14,374 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-06 00:44:14,374 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-02-06 00:44:14,377 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-02-06 00:44:14,388 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-02-06 00:44:15,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-02-06 00:44:15,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-02-06 00:44:16,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-02-06 00:44:17,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-02-06 00:44:18,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-02-06 00:44:18,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-02-06 00:44:19,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-02-06 00:44:19,617 [ scc.git] DEBUG ## Unique users: [] 2026-02-06 00:44:19,617 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:19,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:19,620 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-06 00:44:19,658 [ scc.git] DEBUG Get sha1 of %s 2026-02-06 00:44:19,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-06 00:44:19,660 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:44:19,696 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:44:19,700 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff0438390> has no local changes 2026-02-06 00:44:19,700 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:44:19,706 [ scc.git] DEBUG [detached HEAD 3cf35c1] merge master -Dorg -Ssuccess-only 2026-02-06 00:44:19,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:19,706 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-06 00:44:19,774 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-02-06 00:44:20,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:20,026 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-02-06 00:44:20,028 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-02-06 00:44:20,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:20,435 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-02-06 00:44:20,437 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-02-06 00:44:20,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:20,848 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-02-06 00:44:20,850 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-02-06 00:44:21,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:21,238 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-02-06 00:44:21,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:21,642 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-02-06 00:44:21,644 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-02-06 00:44:22,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:22,034 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-02-06 00:44:22,036 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-02-06 00:44:22,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:22,436 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-02-06 00:44:22,438 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-02-06 00:44:22,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:22,838 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-02-06 00:44:22,840 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-02-06 00:44:23,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:23,248 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-02-06 00:44:23,250 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-02-06 00:44:23,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:23,647 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-02-06 00:44:23,649 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-02-06 00:44:24,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:24,046 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-02-06 00:44:24,048 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-02-06 00:44:24,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:24,449 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-02-06 00:44:24,451 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-02-06 00:44:24,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:24,859 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-02-06 00:44:25,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:25,255 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-02-06 00:44:25,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:25,650 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-02-06 00:44:25,651 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-02-06 00:44:26,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:26,056 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-02-06 00:44:26,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:26,603 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-02-06 00:44:26,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:26,994 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-02-06 00:44:26,996 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-02-06 00:44:27,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:27,393 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-02-06 00:44:27,395 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-02-06 00:44:27,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:27,798 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-02-06 00:44:27,800 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-02-06 00:44:28,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:28,197 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-02-06 00:44:28,199 [ scc.config] DEBUG Found submodule.scripts.url 2026-02-06 00:44:28,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-06 00:44:28,608 [ scc.config] DEBUG Found submodule.scripts.branch 2026-02-06 00:44:28,608 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-06 00:44:28,682 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3ff442e610> has local changes 2026-02-06 00:44:28,682 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 182 will-moore 'Revert "Remove support for Plate import"' (exclude comment) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9530c10 Previously merged: - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 174 will-moore 'Skip wells' Conflicting PRs (not included): - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Repository: ome/omero-figure Excluded PRs: - PR 667 Tom-TBT 'Label suggestion interface' (status: failure) - PR 666 will-moore 'Standalone app' (stage: draft) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..e241dc01 Previously merged: - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 662 will-moore 'Export script runnable without OMERO' - PR 663 will-moore 'Zarr' Conflicting PRs (not included): - PR 664 Nirkan 'Handle many channels ' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#47 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/47/)' 2026-02-06 00:44:28,693 [ scc.git] DEBUG [detached HEAD a7dc7f8] merge master -Dorg -Ssuccess-only 2026-02-06 00:44:28,693 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-02-06 00:44:28,694 [ scc.merge] INFO Repository: ome/omero-plugins 2026-02-06 00:44:28,694 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,694 [ scc.merge] INFO 2026-02-06 00:44:28,694 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-06 00:44:28,694 [ scc.merge] INFO 2026-02-06 00:44:28,694 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-02-06 00:44:28,694 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,694 [ scc.merge] INFO 2026-02-06 00:44:28,694 [ scc.merge] INFO 2026-02-06 00:44:28,694 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-02-06 00:44:28,694 [ scc.merge] INFO Excluded PRs: 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-02-06 00:44:28,694 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,694 [ scc.merge] INFO 2026-02-06 00:44:28,694 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:28,694 [ scc.merge] INFO 2026-02-06 00:44:28,694 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-02-06 00:44:28,694 [ scc.merge] INFO Excluded PRs: 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-02-06 00:44:28,694 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-02-06 00:44:28,694 [ scc.merge] INFO Previously merged: 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-02-06 00:44:28,694 [ scc.merge] INFO 2026-02-06 00:44:28,694 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-02-06 00:44:28,694 [ scc.merge] INFO 2026-02-06 00:44:28,694 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-02-06 00:44:28,694 [ scc.merge] INFO Excluded PRs: 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' (exclude comment) 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-02-06 00:44:28,694 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure) 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft) 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-02-06 00:44:28,695 [ scc.merge] INFO Updating 11d3587..9530c10 2026-02-06 00:44:28,695 [ scc.merge] INFO Previously merged: 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-06 00:44:28,695 [ scc.merge] INFO 2026-02-06 00:44:28,695 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-02-06 00:44:28,695 [ scc.merge] INFO 2026-02-06 00:44:28,695 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-02-06 00:44:28,695 [ scc.merge] INFO 2026-02-06 00:44:28,695 [ scc.merge] INFO Repository: ome/omero-figure 2026-02-06 00:44:28,695 [ scc.merge] INFO Excluded PRs: 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' (status: failure) 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' (stage: draft) 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-02-06 00:44:28,695 [ scc.merge] INFO Updating 9cc36cde..e241dc01 2026-02-06 00:44:28,695 [ scc.merge] INFO Previously merged: 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-02-06 00:44:28,695 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-06 00:44:28,696 [ scc.merge] INFO 2026-02-06 00:44:28,696 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 662 will-moore 'Export script runnable without OMERO' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-02-06 00:44:28,696 [ scc.merge] INFO 2026-02-06 00:44:28,696 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-02-06 00:44:28,696 [ scc.merge] INFO 2026-02-06 00:44:28,696 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-02-06 00:44:28,696 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,696 [ scc.merge] INFO 2026-02-06 00:44:28,696 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:28,696 [ scc.merge] INFO 2026-02-06 00:44:28,696 [ scc.merge] INFO Repository: ome/omero-gallery 2026-02-06 00:44:28,696 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,696 [ scc.merge] INFO 2026-02-06 00:44:28,696 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-02-06 00:44:28,696 [ scc.merge] INFO 2026-02-06 00:44:28,696 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-02-06 00:44:28,696 [ scc.merge] INFO 2026-02-06 00:44:28,696 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-02-06 00:44:28,696 [ scc.merge] INFO Excluded PRs: 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-02-06 00:44:28,696 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-02-06 00:44:28,696 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-02-06 00:44:28,696 [ scc.merge] INFO Previously merged: 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-06 00:44:28,697 [ scc.merge] INFO 2026-02-06 00:44:28,697 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-02-06 00:44:28,697 [ scc.merge] INFO 2026-02-06 00:44:28,697 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-02-06 00:44:28,697 [ scc.merge] INFO 2026-02-06 00:44:28,697 [ scc.merge] INFO Repository: ome/omero-mapr 2026-02-06 00:44:28,697 [ scc.merge] INFO Excluded PRs: 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-02-06 00:44:28,697 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,697 [ scc.merge] INFO 2026-02-06 00:44:28,697 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-06 00:44:28,697 [ scc.merge] INFO 2026-02-06 00:44:28,697 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:28,697 [ scc.merge] INFO 2026-02-06 00:44:28,697 [ scc.merge] INFO Repository: ome/omero-metadata 2026-02-06 00:44:28,697 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-02-06 00:44:28,697 [ scc.merge] INFO Previously merged: 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-06 00:44:28,697 [ scc.merge] INFO 2026-02-06 00:44:28,697 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-02-06 00:44:28,697 [ scc.merge] INFO 2026-02-06 00:44:28,697 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-02-06 00:44:28,697 [ scc.merge] INFO 2026-02-06 00:44:28,697 [ scc.merge] INFO Repository: ome/omero-parade 2026-02-06 00:44:28,697 [ scc.merge] INFO Excluded PRs: 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-02-06 00:44:28,697 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,697 [ scc.merge] INFO 2026-02-06 00:44:28,697 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-02-06 00:44:28,697 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-02-06 00:44:28,698 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Repository: ome/omero-rois 2026-02-06 00:44:28,698 [ scc.merge] INFO Excluded PRs: 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-02-06 00:44:28,698 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Repository: ome/omero-signup 2026-02-06 00:44:28,698 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-02-06 00:44:28,698 [ scc.merge] INFO Excluded PRs: 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2026-02-06 00:44:28,698 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-02-06 00:44:28,698 [ scc.merge] INFO Previously merged: 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Repository: ome/omero-upload 2026-02-06 00:44:28,698 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-02-06 00:44:28,698 [ scc.merge] INFO Updating deab817..160d894 2026-02-06 00:44:28,698 [ scc.merge] INFO Previously merged: 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-02-06 00:44:28,698 [ scc.merge] INFO 2026-02-06 00:44:28,698 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,698 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-02-06 00:44:28,699 [ scc.merge] INFO Excluded PRs: 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-02-06 00:44:28,699 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-02-06 00:44:28,699 [ scc.merge] INFO Previously merged: 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-02-06 00:44:28,699 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-02-06 00:44:28,699 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] INFO Merged PRs: 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-02-06 00:44:28,699 [ scc.merge] INFO Already up to date. 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] INFO Repository: ome/scripts 2026-02-06 00:44:28,699 [ scc.merge] INFO Excluded PRs: 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2026-02-06 00:44:28,699 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-02-06 00:44:28,699 [ scc.merge] INFO Previously merged: 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-02-06 00:44:28,699 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] INFO 2026-02-06 00:44:28,699 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-02-06 00:44:28,699 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-06 00:44:28,702 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-06 00:44:28,704 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-06 00:44:28,706 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-06 00:44:28,708 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-06 00:44:28,710 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-06 00:44:28,712 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-06 00:44:28,714 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-06 00:44:28,716 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-06 00:44:28,718 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-06 00:44:28,721 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-06 00:44:28,723 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,725 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-06 00:44:28,725 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-06 00:44:28,727 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-06 00:44:28,729 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-06 00:44:28,731 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-06 00:44:28,733 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,735 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-06 00:44:28,735 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-06 00:44:28,737 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-06 00:44:28,739 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-06 00:44:28,741 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-06 00:44:28,743 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-06 00:44:28,745 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-06 00:44:28,745 [ scc.git] DEBUG Calling 'git remote' 2026-02-06 00:44:28,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.6-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 98014c8] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 7524b44] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-06 00:45:15,013 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-06 00:45:24,440 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-06 00:45:26,983 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-06 00:45:32,012 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-06 00:46:24,910 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS