08:58:22Started by upstream project "Trigger" build number 10008:58:22originally caused by:
08:58:22 Started by user devspace08:58:22Running as SYSTEM
08:58:22Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-push
08:58:22The recommended git tool is: NONE
08:58:22No credentials specified
08:58:22 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-push/src/.git # timeout=10
08:58:22Fetching changes from the remote Git repository
08:58:22 > git config remote.origin.url https://github.com/ome/openmicroscopy.git # timeout=10
08:58:22Fetching upstream changes from https://github.com/ome/openmicroscopy.git08:58:22 > git --version # timeout=10
08:58:22 > git --version # 'git version 2.52.0'
08:58:22 > git fetch --tags --force --progress -- https://github.com/ome/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
08:58:29 > git rev-parse origin/develop^{commit} # timeout=10
08:58:29Checking out Revision a49489e0cb2c30833afa413ae796f65478f6a387 (origin/develop)
08:58:29 > git config core.sparsecheckout # timeout=10
08:58:29 > git checkout -f a49489e0cb2c30833afa413ae796f65478f6a387 # timeout=30
08:58:32Commit message: "Merge pull request #6462 from pwalczysko/nfs-test-fix"
08:58:32 > git rev-list --no-walk a49489e0cb2c30833afa413ae796f65478f6a387 # timeout=10
08:58:32Cleaning workspace
08:58:32 > git rev-parse --verify HEAD # timeout=10
08:58:32Resetting working tree
08:58:32 > git reset --hard # timeout=10
08:58:33 > git clean -fdx # timeout=10
08:58:33Copied 1 artifact from "OMERO-python-superbuild-build" build number 7208:58:33[OMERO-push] $ /bin/bash -xe /tmp/jenkins10036474635452140142.sh
08:58:33+ python3.11 -mvenv venv
08:58:36+ source /home/omero/workspace/OMERO-push/venv/bin/activate
08:58:36++ deactivate nondestructive
08:58:36++ '[' -n '' ']'
08:58:36++ '[' -n '' ']'
08:58:36++ hash -r
08:58:36++ '[' -n '' ']'
08:58:36++ unset VIRTUAL_ENV
08:58:36++ unset VIRTUAL_ENV_PROMPT
08:58:36++ '[' '!' nondestructive = nondestructive ']'
08:58:36++ VIRTUAL_ENV=/home/omero/workspace/OMERO-push/venv
08:58:36++ export VIRTUAL_ENV
08:58:36++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
08:58:36++ PATH=/home/omero/workspace/OMERO-push/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
08:58:36++ export PATH
08:58:36++ '[' -n '' ']'
08:58:36++ '[' -z '' ']'
08:58:36++ _OLD_VIRTUAL_PS1=
08:58:36++ PS1='(venv) '
08:58:36++ export PS1
08:58:36++ VIRTUAL_ENV_PROMPT='(venv) '
08:58:36++ export VIRTUAL_ENV_PROMPT
08:58:36++ hash -r
08:58:36+ pip install -U pip
08:58:41Requirement already satisfied: pip in ./venv/lib64/python3.11/site-packages (26.2.1)
08:58:42+ pip install -U scc
08:58:42Requirement already satisfied: scc in ./venv/lib64/python3.11/site-packages (0.20.0)
08:58:43Requirement already satisfied: PyGithub>=1.54 in ./venv/lib64/python3.11/site-packages (from scc) (2.9.1)
08:58:43Requirement already satisfied: PyYAML>=5.1 in ./venv/lib64/python3.11/site-packages (from scc) (6.0.3)
08:58:43Requirement already satisfied: future in ./venv/lib64/python3.11/site-packages (from scc) (1.0.0)
08:58:43Requirement already satisfied: ruamel.yaml in ./venv/lib64/python3.11/site-packages (from scc) (0.19.1)
08:58:43Requirement already satisfied: ruamel.yaml.jinja2 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.7)
08:58:43Requirement already satisfied: six in ./venv/lib64/python3.11/site-packages (from scc) (1.17.0)
08:58:43Requirement already satisfied: urllib3<2 in ./venv/lib64/python3.11/site-packages (from scc) (1.26.20)
08:58:43Requirement already satisfied: yaclifw<0.3,>=0.2.0 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.0)
08:58:43Requirement already satisfied: pynacl>=1.4.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.6.2)
08:58:43Requirement already satisfied: requests>=2.14.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (2.34.2)
08:58:43Requirement already satisfied: pyjwt>=2.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.13.0)
08:58:43Requirement already satisfied: typing-extensions>=4.5.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (4.16.0)
08:58:43Requirement already satisfied: cryptography>=3.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (49.0.0)
08:58:43Requirement already satisfied: cffi>=2.0.0 in ./venv/lib64/python3.11/site-packages (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.1.0)
08:58:43Requirement already satisfied: pycparser in ./venv/lib64/python3.11/site-packages (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (3.0)
08:58:43Requirement already satisfied: charset_normalizer<4,>=2 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.4.8)
08:58:43Requirement already satisfied: idna<4,>=2.5 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.18)
08:58:43Requirement already satisfied: certifi>=2023.5.7 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2026.6.17)
08:58:43+ test -e src
08:58:43+ cd src
08:58:43++ git config github.user
08:58:43+ user=snoopycrimecop
08:58:43+ scc merge develop --no-ask --reset --shallow -S success-only
08:58:532026-09-18 08:58:53,382 [ scc.merge] INFO Merging Pull Request(s) based on develop
08:58:532026-09-18 08:58:53,383 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
08:58:532026-09-18 08:58:53,383 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
08:58:532026-09-18 08:58:53,383 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
08:58:532026-09-18 08:58:53,383 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
08:58:532026-09-18 08:58:53,383 [ scc.merge] INFO Excluding Pull Request(s) without successful status
08:59:192026-09-18 08:59:19,126 [ scc.merge] INFO Repository: ome/openmicroscopy
08:59:192026-09-18 08:59:19,126 [ scc.merge] INFO Excluded PRs:
08:59:192026-09-18 08:59:19,126 [ scc.merge] INFO - PR 6212 jburel 'add test to import images' (exclude comment)
08:59:192026-09-18 08:59:19,126 [ scc.merge] INFO Already up to date.
08:59:192026-09-18 08:59:19,126 [ scc.merge] INFO
08:59:192026-09-18 08:59:19,126 [ scc.merge] INFO Merged PRs:
08:59:192026-09-18 08:59:19,126 [ scc.merge] INFO - PR 6423 jburel 'Use \d'
08:59:192026-09-18 08:59:19,126 [ scc.merge] INFO - PR 6458 will-moore 'Add test for conn.getObjects('Annotations', opts={...})'
08:59:192026-09-18 08:59:19,126 [ scc.merge] INFO - PR 6459 will-moore 'JSON API annotations tests'
08:59:192026-09-18 08:59:19,126 [ scc.merge] INFO - PR 6478 dominikl 'Add omero-zarr-pixel-buffer'
08:59:192026-09-18 08:59:19,126 [ scc.merge] INFO
08:59:19+ cp etc/omero.properties etc/omero.properties.bak
08:59:19+ rm etc/omero.properties
08:59:19+ touch etc/omero.properties
08:59:19++ sed -n '/Internal dependencies/=' etc/omero.properties.bak
08:59:19+ ne=252
08:59:19++ sed -n 1,252p etc/omero.properties.bak
08:59:19+ line='##
08:59:19## omero.properties
08:59:19## ----------------
08:59:19##
08:59:19## DO NOT EDIT!
08:59:19##
08:59:19##
08:59:19## Any of these properties can be altered by using `omero config`. MODIFYING
08:59:19## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
08:59:19## at compile time!
08:59:19##
08:59:19## For an overview of these properties, see
08:59:19## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html08:59:19##
08:59:19## Properties marked with "DEVELOPMENT" should not be used in production.
08:59:1908:59:19# Comma separated list of Ice transports available to clients. The default
08:59:19# value ("ssl,tcp") instructs Ice to open the ports specified by the
08:59:19# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
08:59:19# will prevent all non-encrypted connections to the OMERO server.
08:59:19#
08:59:19# Additionally, there are two experimental values for using websockets:
08:59:19# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
08:59:19# that are opened are controlled by the omero.ports.ws and omero.ports.wss
08:59:19# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
08:59:19#
08:59:19# Note: When using websockets behind a web server like nginx, additional
08:59:19# configuration may be needed.
08:59:19omero.client.icetransports=ssl,tcp
08:59:1908:59:19# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
08:59:19# server
08:59:19omero.ports.prefix=
08:59:1908:59:19# The Glacier2 SSL port number to use
08:59:19omero.ports.ssl=4064
08:59:1908:59:19# The Glacier2 TCP port number to use (unencrypted)
08:59:19omero.ports.tcp=4063
08:59:1908:59:19# The Glacier2 WSS port number to use
08:59:19omero.ports.wss=4066
08:59:1908:59:19# The Glacier2 WS port number to use (unencrypted)
08:59:19omero.ports.ws=4065
08:59:1908:59:19# The IceGrid registry port number to use
08:59:19omero.ports.registry=4061
08:59:1908:59:19#############################################
08:59:19## JVM configuration
08:59:19##
08:59:19## Note: changes to the omero.jvmcfg properties
08:59:19## will *not* be reflected in OMERO.server
08:59:19## since they are defined in OMERO.py.
08:59:19#############################################
08:59:19## (For documentation only)
08:59:19# Memory strategy which will be used by default.
08:59:19# Options include: percent, manual
08:59:19omero.jvmcfg.strategy=percent
08:59:1908:59:19## (For documentation only)
08:59:19# Explicit value for the `-Xmx` argument, e.g.
08:59:19# "1g"
08:59:19omero.jvmcfg.heap_size=
08:59:1908:59:19## (For documentation only)
08:59:19# Explicit value for the MaxPermSize argument
08:59:19# to the JVM, e.g. "500M". Ignored for Java8+
08:59:19omero.jvmcfg.perm_gen=
08:59:1908:59:19## (For documentation only)
08:59:19# Toggles on or off heap dumps on OOMs. Default is "off".
08:59:19# The special value "tmp" will create the heap dumps in
08:59:19# your temp directory.
08:59:19omero.jvmcfg.heap_dump=
08:59:1908:59:19## (For documentation only)
08:59:19# Used only by the percent strategy. An integer between 0
08:59:19# and 100 which is the percent of active memory that will
08:59:19# be used by the service.
08:59:19omero.jvmcfg.percent=
08:59:1908:59:19## (For documentation only)
08:59:19# Contains other parameters which should be passed to the
08:59:19# JVM. The value of "append" is treated as if it were on
08:59:19# the command line so will be separated on whitespace.
08:59:19# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
08:59:19# results in two new arguments.
08:59:19# Note that when using `config set` from the command line
08:59:19# one may need to give a prior `--` option to prevent a value
08:59:19# starting with `-` from already being parsed as an option,
08:59:19# and values may need quoting to prevent whitespace or other
08:59:19# significant characters from being interpreted prematurely.
08:59:1908:59:19omero.jvmcfg.append=
08:59:1908:59:19## (For documentation only)
08:59:19# Manual override of the total system memory that
08:59:19# OMERO will *think* is present on the local OS (MB).
08:59:19# If unset, an attempt will be made to detect the actual
08:59:19# amount: first by using the Python library `psutil` and
08:59:19# if that is not installed, by running a Java tool. If
08:59:19# neither works, 4.0GB is assumed.
08:59:19omero.jvmcfg.system_memory=
08:59:1908:59:19## (For documentation only)
08:59:19# Suggestion for strategies as to the minimum memory
08:59:19# that they will use for calculating JVM settings (MB).
08:59:19omero.jvmcfg.min_system_memory=3414
08:59:1908:59:19## (For documentation only)
08:59:19# Suggestion for strategies as to the maximum memory
08:59:19# that they will use for calculating JVM settings (MB).
08:59:19omero.jvmcfg.max_system_memory=48000
08:59:1908:59:1908:59:19#############################################
08:59:19## Logging properties
08:59:19##
08:59:19## Note: changes to the default omero.logging values in
08:59:19## this file will *not* be reflected in OMERO.server
08:59:19## since they are defined in OMERO.py
08:59:19#############################################
08:59:1908:59:19## (For documentation only)
08:59:19# Relative server directory where the log files should be stored.
08:59:19omero.logging.directory=var/log/
08:59:1908:59:19## (For documentation only)
08:59:19# Whether the server log files should be rotated at a certain time
08:59:19# interval. If true, log files will be rolled over at midnight.
08:59:19# Otherwise, log files will be rolled over at a predetermined size,
08:59:19# see omero.logging.logsize for more information.
08:59:19omero.logging.timedlog=false
08:59:1908:59:19## (For documentation only)
08:59:19# If omero.logging.timedlog is false or unset, specifies the
08:59:19# maximum size of the server log files in bytes above which a
08:59:19# new log file should be created.
08:59:19omero.logging.logsize=5000000
08:59:1908:59:19## (For documentation only)
08:59:19# If omero.logging.timedlog is false or unset, specifies the
08:59:19# number of old server log files that should be kept. Old log
08:59:19# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
08:59:19omero.logging.lognum=9
08:59:1908:59:19## (For documentation only)
08:59:19# Specifies the threshold for the Python servers log files. Logging messages
08:59:19# which are less severe than this value will be ignored. For a list of
08:59:19# available values, see https://docs.python.org/3/library/logging.html#levels.
08:59:19omero.logging.level=20
08:59:1908:59:19#############################################
08:59:19## Ice overrides
08:59:19##
08:59:19## Though not used directly by OMERO, a number
08:59:19## of properties prefixed with "Ice.*" will
08:59:19## alter the behavior of the OMERO runtime
08:59:19## by configuring the Ice communicators. For a
08:59:19## full listing see:
08:59:19##
08:59:19## http://doc.zeroc.com/display/Ice/Property+Reference08:59:19## For more information see
08:59:19## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start08:59:19#############################################
08:59:1908:59:19# Disable IPv6 by setting to 0. Only needed in
08:59:19# certain situations.
08:59:19Ice.IPv6=1
08:59:1908:59:19# Glacier2Template IceSSL defaults and overrides,
08:59:19# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
08:59:19# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
08:59:19# update the corresponding IceSSL. property.
08:59:19omero.glacier2.IceSSL=
08:59:1908:59:19# Glacier2Template SSL maximum allowed protocol (mac bug)
08:59:19omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
08:59:19# Glacier2Template SSL allowed cipher suites
08:59:19omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
08:59:19# Glacier2Template SSL verification requirements
08:59:19omero.glacier2.IceSSL.VerifyPeer=0
08:59:19# Glacier2Template SSL allowed protocols
08:59:19omero.glacier2.IceSSL.Protocols=tls1
08:59:1908:59:19# Override the default set of OMERO services.
08:59:19# For example, to run OMERO.server with Blitz and Tables only
08:59:19# (i.e. disable Processor, DropBox, Indexer, PixelData)
08:59:19# set this to ``master:Blitz-0,Tables-0``.
08:59:19# Also use this to distribute OMERO services across multiple nodes,
08:59:19# for example:
08:59:19# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
08:59:19# See
08:59:19# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples08:59:19omero.server.nodedescriptors=
08:59:1908:59:19#############################################
08:59:19## Darwin (OS X) specific defaults for templated configuration files only.
08:59:19## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
08:59:19## file.
08:59:19## Do not set these properties in ``omero config``, instead set the original
08:59:19## ``xxx.yyy`` property
08:59:19#############################################
08:59:19_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
08:59:1908:59:19## (For documentation only)
08:59:19# Name of the Python module to use when starting the Tables service
08:59:19omero.tables.module=runTables
08:59:1908:59:19#############################################
08:59:19## Server product name for release artifacts
08:59:19#############################################
08:59:19product.name=OMERO.server
08:59:1908:59:19#############################################
08:59:19### Properties below this marker are ignored by
08:59:19### omero.install.config_parser.PropertyParser
08:59:19### END
08:59:1908:59:19#############################################
08:59:19## Library versions
08:59:19#############################################
08:59:19##
08:59:19versions.findbugs=1.2.1
08:59:19versions.ice36=3.6.5
08:59:19versions.ice36_lib=36
08:59:19## internal
08:59:19versions.omeroshares36=3.6.3
08:59:19versions.omeromock36=3.6.3
08:59:19versions.icedb36=3.6.3
08:59:19versions.ipython=1.2.1
08:59:1908:59:19versions.janino=2.5.10
08:59:1908:59:19versions.reportng=1.1.1
08:59:1908:59:19versions.testng=7.5
08:59:19versions.velocity=1.4
08:59:1908:59:19versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE08:59:19versions.omero-scripts-url=${versions.omero-pypi}
08:59:1908:59:19# hard coded, should not be picked up by scc for now!
08:59:19versions.omero-zarr-pixel-buffer=0.7.1
08:59:1908:59:19###
08:59:19### Appended Values
08:59:19###
08:59:1908:59:19## Internal dependencies'
08:59:19+ echo '##
08:59:19## omero.properties
08:59:19## ----------------
08:59:19##
08:59:19## DO NOT EDIT!
08:59:19##
08:59:19##
08:59:19## Any of these properties can be altered by using `omero config`. MODIFYING
08:59:19## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
08:59:19## at compile time!
08:59:19##
08:59:19## For an overview of these properties, see
08:59:19## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html08:59:19##
08:59:19## Properties marked with "DEVELOPMENT" should not be used in production.
08:59:1908:59:19# Comma separated list of Ice transports available to clients. The default
08:59:19# value ("ssl,tcp") instructs Ice to open the ports specified by the
08:59:19# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
08:59:19# will prevent all non-encrypted connections to the OMERO server.
08:59:19#
08:59:19# Additionally, there are two experimental values for using websockets:
08:59:19# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
08:59:19# that are opened are controlled by the omero.ports.ws and omero.ports.wss
08:59:19# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
08:59:19#
08:59:19# Note: When using websockets behind a web server like nginx, additional
08:59:19# configuration may be needed.
08:59:19omero.client.icetransports=ssl,tcp
08:59:1908:59:19# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
08:59:19# server
08:59:19omero.ports.prefix=
08:59:1908:59:19# The Glacier2 SSL port number to use
08:59:19omero.ports.ssl=4064
08:59:1908:59:19# The Glacier2 TCP port number to use (unencrypted)
08:59:19omero.ports.tcp=4063
08:59:1908:59:19# The Glacier2 WSS port number to use
08:59:19omero.ports.wss=4066
08:59:1908:59:19# The Glacier2 WS port number to use (unencrypted)
08:59:19omero.ports.ws=4065
08:59:1908:59:19# The IceGrid registry port number to use
08:59:19omero.ports.registry=4061
08:59:1908:59:19#############################################
08:59:19## JVM configuration
08:59:19##
08:59:19## Note: changes to the omero.jvmcfg properties
08:59:19## will *not* be reflected in OMERO.server
08:59:19## since they are defined in OMERO.py.
08:59:19#############################################
08:59:19## (For documentation only)
08:59:19# Memory strategy which will be used by default.
08:59:19# Options include: percent, manual
08:59:19omero.jvmcfg.strategy=percent
08:59:1908:59:19## (For documentation only)
08:59:19# Explicit value for the `-Xmx` argument, e.g.
08:59:19# "1g"
08:59:19omero.jvmcfg.heap_size=
08:59:1908:59:19## (For documentation only)
08:59:19# Explicit value for the MaxPermSize argument
08:59:19# to the JVM, e.g. "500M". Ignored for Java8+
08:59:19omero.jvmcfg.perm_gen=
08:59:1908:59:19## (For documentation only)
08:59:19# Toggles on or off heap dumps on OOMs. Default is "off".
08:59:19# The special value "tmp" will create the heap dumps in
08:59:19# your temp directory.
08:59:19omero.jvmcfg.heap_dump=
08:59:1908:59:19## (For documentation only)
08:59:19# Used only by the percent strategy. An integer between 0
08:59:19# and 100 which is the percent of active memory that will
08:59:19# be used by the service.
08:59:19omero.jvmcfg.percent=
08:59:1908:59:19## (For documentation only)
08:59:19# Contains other parameters which should be passed to the
08:59:19# JVM. The value of "append" is treated as if it were on
08:59:19# the command line so will be separated on whitespace.
08:59:19# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
08:59:19# results in two new arguments.
08:59:19# Note that when using `config set` from the command line
08:59:19# one may need to give a prior `--` option to prevent a value
08:59:19# starting with `-` from already being parsed as an option,
08:59:19# and values may need quoting to prevent whitespace or other
08:59:19# significant characters from being interpreted prematurely.
08:59:1908:59:19omero.jvmcfg.append=
08:59:1908:59:19## (For documentation only)
08:59:19# Manual override of the total system memory that
08:59:19# OMERO will *think* is present on the local OS (MB).
08:59:19# If unset, an attempt will be made to detect the actual
08:59:19# amount: first by using the Python library `psutil` and
08:59:19# if that is not installed, by running a Java tool. If
08:59:19# neither works, 4.0GB is assumed.
08:59:19omero.jvmcfg.system_memory=
08:59:1908:59:19## (For documentation only)
08:59:19# Suggestion for strategies as to the minimum memory
08:59:19# that they will use for calculating JVM settings (MB).
08:59:19omero.jvmcfg.min_system_memory=3414
08:59:1908:59:19## (For documentation only)
08:59:19# Suggestion for strategies as to the maximum memory
08:59:19# that they will use for calculating JVM settings (MB).
08:59:19omero.jvmcfg.max_system_memory=48000
08:59:1908:59:1908:59:19#############################################
08:59:19## Logging properties
08:59:19##
08:59:19## Note: changes to the default omero.logging values in
08:59:19## this file will *not* be reflected in OMERO.server
08:59:19## since they are defined in OMERO.py
08:59:19#############################################
08:59:1908:59:19## (For documentation only)
08:59:19# Relative server directory where the log files should be stored.
08:59:19omero.logging.directory=var/log/
08:59:1908:59:19## (For documentation only)
08:59:19# Whether the server log files should be rotated at a certain time
08:59:19# interval. If true, log files will be rolled over at midnight.
08:59:19# Otherwise, log files will be rolled over at a predetermined size,
08:59:19# see omero.logging.logsize for more information.
08:59:19omero.logging.timedlog=false
08:59:1908:59:19## (For documentation only)
08:59:19# If omero.logging.timedlog is false or unset, specifies the
08:59:19# maximum size of the server log files in bytes above which a
08:59:19# new log file should be created.
08:59:19omero.logging.logsize=5000000
08:59:1908:59:19## (For documentation only)
08:59:19# If omero.logging.timedlog is false or unset, specifies the
08:59:19# number of old server log files that should be kept. Old log
08:59:19# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
08:59:19omero.logging.lognum=9
08:59:1908:59:19## (For documentation only)
08:59:19# Specifies the threshold for the Python servers log files. Logging messages
08:59:19# which are less severe than this value will be ignored. For a list of
08:59:19# available values, see https://docs.python.org/3/library/logging.html#levels.
08:59:19omero.logging.level=20
08:59:1908:59:19#############################################
08:59:19## Ice overrides
08:59:19##
08:59:19## Though not used directly by OMERO, a number
08:59:19## of properties prefixed with "Ice.*" will
08:59:19## alter the behavior of the OMERO runtime
08:59:19## by configuring the Ice communicators. For a
08:59:19## full listing see:
08:59:19##
08:59:19## http://doc.zeroc.com/display/Ice/Property+Reference08:59:19## For more information see
08:59:19## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start08:59:19#############################################
08:59:1908:59:19# Disable IPv6 by setting to 0. Only needed in
08:59:19# certain situations.
08:59:19Ice.IPv6=1
08:59:1908:59:19# Glacier2Template IceSSL defaults and overrides,
08:59:19# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
08:59:19# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
08:59:19# update the corresponding IceSSL. property.
08:59:19omero.glacier2.IceSSL=
08:59:1908:59:19# Glacier2Template SSL maximum allowed protocol (mac bug)
08:59:19omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
08:59:19# Glacier2Template SSL allowed cipher suites
08:59:19omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
08:59:19# Glacier2Template SSL verification requirements
08:59:19omero.glacier2.IceSSL.VerifyPeer=0
08:59:19# Glacier2Template SSL allowed protocols
08:59:19omero.glacier2.IceSSL.Protocols=tls1
08:59:1908:59:19# Override the default set of OMERO services.
08:59:19# For example, to run OMERO.server with Blitz and Tables only
08:59:19# (i.e. disable Processor, DropBox, Indexer, PixelData)
08:59:19# set this to ``master:Blitz-0,Tables-0``.
08:59:19# Also use this to distribute OMERO services across multiple nodes,
08:59:19# for example:
08:59:19# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
08:59:19# See
08:59:19# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples08:59:19omero.server.nodedescriptors=
08:59:1908:59:19#############################################
08:59:19## Darwin (OS X) specific defaults for templated configuration files only.
08:59:19## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
08:59:19## file.
08:59:19## Do not set these properties in ``omero config``, instead set the original
08:59:19## ``xxx.yyy`` property
08:59:19#############################################
08:59:19_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
08:59:1908:59:19## (For documentation only)
08:59:19# Name of the Python module to use when starting the Tables service
08:59:19omero.tables.module=runTables
08:59:1908:59:19#############################################
08:59:19## Server product name for release artifacts
08:59:19#############################################
08:59:19product.name=OMERO.server
08:59:1908:59:19#############################################
08:59:19### Properties below this marker are ignored by
08:59:19### omero.install.config_parser.PropertyParser
08:59:19### END
08:59:1908:59:19#############################################
08:59:19## Library versions
08:59:19#############################################
08:59:19##
08:59:19versions.findbugs=1.2.1
08:59:19versions.ice36=3.6.5
08:59:19versions.ice36_lib=36
08:59:19## internal
08:59:19versions.omeroshares36=3.6.3
08:59:19versions.omeromock36=3.6.3
08:59:19versions.icedb36=3.6.3
08:59:19versions.ipython=1.2.1
08:59:1908:59:19versions.janino=2.5.10
08:59:1908:59:19versions.reportng=1.1.1
08:59:1908:59:19versions.testng=7.5
08:59:19versions.velocity=1.4
08:59:1908:59:19versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE08:59:19versions.omero-scripts-url=${versions.omero-pypi}
08:59:1908:59:19# hard coded, should not be picked up by scc for now!
08:59:19versions.omero-zarr-pixel-buffer=0.7.1
08:59:1908:59:19###
08:59:19### Appended Values
08:59:19###
08:59:1908:59:19## Internal dependencies'
08:59:19+ echo versions.omero-pypi=https://merge-ci.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/PACKAGE/dist/08:59:19+ echo versions.omero-github=https://github.com/snoopycrimecop/PACKAGE/archive08:59:19+ echo versions.scripts-prefix=
08:59:19+ echo versions.scripts=merge_ci
08:59:19+ cat /home/omero/workspace/OMERO-push/version.properties
08:59:19+ git commit -a -m 'Add version.properties to etc/omero.properties'
08:59:19[detached HEAD 6e43949dc6] Add version.properties to etc/omero.properties
08:59:19 1 file changed, 46 insertions(+), 5 deletions(-)
08:59:19+ git push -f git@github.com:snoopycrimecop/openmicroscopy.git HEAD:refs/heads/merge_ci
08:59:23To github.com:snoopycrimecop/openmicroscopy.git
08:59:23 + ce68b23783...6e43949dc6 HEAD -> merge_ci (forced update)
08:59:23Finished: SUCCESS
