Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-22 00:38:41,211 [ scc.config] DEBUG Found github.token
2024-10-22 00:38:41,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-22 00:38:41,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:38:41,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:38:42,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-22 00:38:42,157 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 01:10
2024-10-22 00:38:42,158 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-22 00:38:42,162 [ scc.git] DEBUG Check current status
2024-10-22 00:38:42,162 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-22 00:38:42,166 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-22 00:38:42,166 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-22 00:38:42,206 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-22 00:38:42,209 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-22 00:38:42,213 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-22 00:38:42,217 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-22 00:38:42,220 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-22 00:38:42,226 [ scc.config] DEBUG Found remote.origin.url
2024-10-22 00:38:42,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-22 00:38:43,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-22 00:38:43,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-22 00:38:43,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-22 00:38:44,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-22 00:38:44,255 [ scc.git] DEBUG Resetting...
2024-10-22 00:38:44,255 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-22 00:38:44,262 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-22 00:38:44,262 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-22 00:38:44,312 [ scc.git] DEBUG Check current status
2024-10-22 00:38:44,313 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-22 00:38:44,317 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-22 00:38:44,317 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-22 00:38:44,355 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-22 00:38:44,358 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-22 00:38:44,362 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-22 00:38:44,366 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-22 00:38:44,369 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-22 00:38:44,370 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-22 00:38:44,370 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-22 00:38:44,371 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-22 00:38:44,371 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-22 00:38:44,371 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-22 00:38:44,371 [ scc.repo] DEBUG ## PRs found:
2024-10-22 00:38:44,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-22 00:38:45,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-22 00:38:45,194 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-22 00:38:45,194 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-22 00:38:45,195 [ scc.repo] DEBUG ## Branches found:
2024-10-22 00:38:45,195 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:38:45,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:38:45,199 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-22 00:38:45,203 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-22 00:38:45,203 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-22 00:38:45,207 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-22 00:38:45,210 [ scc.git] DEBUG Already up to date.
2024-10-22 00:38:45,210 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-22 00:38:45,533 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-22 00:38:45,533 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-22 00:38:45,538 [ scc.git] DEBUG ## Unique users: []
2024-10-22 00:38:45,539 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:38:45,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:38:45,543 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-22 00:38:45,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:38:45,616 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-22 00:38:45,625 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:38:45,627 [ scc.git] DEBUG omero-py | 2 +-
2024-10-22 00:38:45,627 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-22 00:38:45,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:38:45,789 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-22 00:38:46,070 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-22 00:38:46,071 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:38:46,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:38:46,075 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-22 00:38:46,647 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7373afe730> has no local changes
2024-10-22 00:38:46,648 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#209 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/209/)'
2024-10-22 00:38:46,671 [ scc.git] DEBUG [detached HEAD d24ca08] merge master -Dorg -Snone
2024-10-22 00:38:46,672 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-22 00:38:46,672 [ scc.merge] INFO Already up to date.
2024-10-22 00:38:46,672 [ scc.merge] INFO
2024-10-22 00:38:46,672 [ scc.merge] INFO Merged PRs:
2024-10-22 00:38:46,672 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-22 00:38:46,672 [ scc.merge] INFO
2024-10-22 00:38:46,672 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-22 00:38:46,672 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-22 00:38:49,057 [ scc.config] DEBUG Found github.token
2024-10-22 00:38:49,059 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-22 00:38:49,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:38:49,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:38:50,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-22 00:38:50,017 [ scc.gh] DEBUG 4988 remaining from 5000 (Reset at 01:10
2024-10-22 00:38:50,017 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-22 00:38:50,022 [ scc.git] DEBUG Check current status
2024-10-22 00:38:50,022 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-22 00:38:50,025 [ scc.git] DEBUG d24ca08 merge master -Dorg -Snone
2024-10-22 00:38:50,026 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-22 00:38:50,064 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-22 00:38:50,067 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-22 00:38:50,070 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-22 00:38:50,074 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-22 00:38:50,077 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-22 00:38:50,081 [ scc.config] DEBUG Found remote.origin.url
2024-10-22 00:38:50,082 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-22 00:38:50,084 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-22 00:38:50,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-22 00:38:50,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-22 00:38:51,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-22 00:38:51,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-22 00:38:52,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-22 00:38:52,159 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:38:52,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-22 00:38:52,206 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-22 00:38:52,209 [ scc.git] DEBUG Check current status
2024-10-22 00:38:52,209 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-22 00:38:52,212 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-22 00:38:52,213 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-22 00:38:52,252 [ scc.config] DEBUG Found remote.origin.url
2024-10-22 00:38:52,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-22 00:38:53,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-22 00:38:53,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-22 00:38:53,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-22 00:38:54,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-22 00:38:54,276 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:38:54,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:38:54,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-22 00:38:54,321 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-22 00:38:54,326 [ scc.git] DEBUG Check current status
2024-10-22 00:38:54,326 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-22 00:38:54,329 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-22 00:38:54,329 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-22 00:38:54,367 [ scc.config] DEBUG Found remote.origin.url
2024-10-22 00:38:54,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-22 00:38:55,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-22 00:38:55,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-22 00:38:55,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-22 00:38:56,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-22 00:38:56,390 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:38:56,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:38:56,433 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-22 00:38:56,433 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-22 00:38:56,438 [ scc.git] DEBUG Check current status
2024-10-22 00:38:56,438 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-22 00:38:56,442 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-22 00:38:56,443 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-22 00:38:56,486 [ scc.config] DEBUG Found remote.origin.url
2024-10-22 00:38:56,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-22 00:38:57,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-22 00:38:57,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-22 00:38:58,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-22 00:38:58,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-22 00:38:58,482 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:38:58,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:38:58,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-22 00:38:58,522 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-22 00:38:58,526 [ scc.git] DEBUG Check current status
2024-10-22 00:38:58,526 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-22 00:38:58,584 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-22 00:38:58,584 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-22 00:38:58,627 [ scc.config] DEBUG Found remote.origin.url
2024-10-22 00:38:58,628 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-22 00:38:58,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-22 00:38:59,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-22 00:38:59,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-22 00:39:00,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-22 00:39:00,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-22 00:39:00,605 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:39:00,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:39:00,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-22 00:39:00,644 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-22 00:39:00,649 [ scc.git] DEBUG Check current status
2024-10-22 00:39:00,649 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-22 00:39:00,714 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-22 00:39:00,714 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-22 00:39:00,758 [ scc.config] DEBUG Found remote.origin.url
2024-10-22 00:39:01,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-22 00:39:01,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-22 00:39:01,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-22 00:39:02,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-22 00:39:02,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-22 00:39:02,812 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:39:02,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:39:02,852 [ scc.git] DEBUG Resetting...
2024-10-22 00:39:02,852 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-22 00:39:02,858 [ scc.git] DEBUG HEAD is now at d24ca08 merge master -Dorg -Snone
2024-10-22 00:39:02,858 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-22 00:39:02,910 [ scc.git] DEBUG Check current status
2024-10-22 00:39:02,911 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-22 00:39:02,915 [ scc.git] DEBUG d24ca08 merge master -Dorg -Snone
2024-10-22 00:39:02,915 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-22 00:39:02,957 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-22 00:39:02,960 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-22 00:39:02,964 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-22 00:39:02,968 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-22 00:39:02,971 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-22 00:39:02,972 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-22 00:39:02,972 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-22 00:39:02,972 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-22 00:39:02,972 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-22 00:39:02,972 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-22 00:39:02,972 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-22 00:39:02,972 [ scc.repo] DEBUG ## PRs found:
2024-10-22 00:39:03,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-22 00:39:03,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-22 00:39:03,742 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-22 00:39:04,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-22 00:39:04,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:05,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-22 00:39:05,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-22 00:39:05,695 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-22 00:39:05,695 [ scc.repo] DEBUG ## Branches found:
2024-10-22 00:39:05,695 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:39:05,695 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:05,700 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-22 00:39:05,704 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-22 00:39:05,704 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-22 00:39:05,709 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-22 00:39:05,714 [ scc.git] DEBUG Already up to date.
2024-10-22 00:39:05,714 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-22 00:39:06,069 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-22 00:39:06,070 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-22 00:39:06,076 [ scc.git] DEBUG ## Unique users: []
2024-10-22 00:39:06,076 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:39:06,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:06,081 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-22 00:39:06,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:06,091 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-22 00:39:06,095 [ scc.git] DEBUG Already up to date.
2024-10-22 00:39:06,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:39:06,231 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-22 00:39:06,275 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:39:06,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:06,280 [ scc.repo] DEBUG ## PRs found:
2024-10-22 00:39:06,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-22 00:39:07,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-22 00:39:07,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-22 00:39:08,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-22 00:39:08,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:09,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-22 00:39:09,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-22 00:39:09,520 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-22 00:39:09,521 [ scc.repo] DEBUG ## Branches found:
2024-10-22 00:39:09,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-22 00:39:09,521 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:39:09,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:09,526 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-22 00:39:09,530 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-22 00:39:09,530 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-22 00:39:09,534 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-22 00:39:09,539 [ scc.git] DEBUG Already up to date.
2024-10-22 00:39:09,539 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-22 00:39:09,901 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-22 00:39:09,901 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-22 00:39:09,907 [ scc.git] DEBUG ## Unique users: []
2024-10-22 00:39:09,907 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:39:09,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:09,912 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-22 00:39:09,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:09,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-22 00:39:09,965 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-22 00:39:09,966 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-22 00:39:09,966 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-22 00:39:09,966 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-22 00:39:09,966 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-22 00:39:09,966 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-22 00:39:09,966 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-22 00:39:09,966 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-22 00:39:09,966 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-22 00:39:09,966 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:39:09,970 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-22 00:39:09,970 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-22 00:39:09,970 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-22 00:39:09,970 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-22 00:39:09,970 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-22 00:39:09,970 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-22 00:39:09,970 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-22 00:39:09,970 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-22 00:39:09,971 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-22 00:39:09,971 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-22 00:39:10,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:39:10,108 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-22 00:39:10,151 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:39:10,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:10,155 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:39:10,196 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-22 00:39:10,202 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf2c31fe20> has no local changes
2024-10-22 00:39:10,202 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#209 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/209/)'
2024-10-22 00:39:10,209 [ scc.git] DEBUG [detached HEAD 3561ebf] merge master -Dorg -Ssuccess-only
2024-10-22 00:39:10,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:39:10,210 [ scc.repo] DEBUG ## PRs found:
2024-10-22 00:39:10,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-22 00:39:11,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-22 00:39:11,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-22 00:39:12,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-22 00:39:12,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:13,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-22 00:39:13,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-22 00:39:13,553 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-22 00:39:13,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-22 00:39:14,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-22 00:39:14,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-22 00:39:15,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-22 00:39:15,413 [ scc.repo] DEBUG ## Branches found:
2024-10-22 00:39:15,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-22 00:39:15,413 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:39:15,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:15,417 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-22 00:39:15,421 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-22 00:39:15,421 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-22 00:39:15,425 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-22 00:39:15,430 [ scc.git] DEBUG Already up to date.
2024-10-22 00:39:15,430 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-22 00:39:15,762 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-22 00:39:15,763 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-22 00:39:15,767 [ scc.git] DEBUG ## Unique users: []
2024-10-22 00:39:15,767 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:39:15,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:15,771 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-22 00:39:15,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:15,781 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-22 00:39:15,790 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-22 00:39:15,791 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:39:15,793 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-22 00:39:15,793 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-22 00:39:15,794 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-22 00:39:15,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:39:15,934 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-22 00:39:15,974 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:39:15,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:15,979 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:39:16,017 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-22 00:39:16,022 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf2cbe5730> has no local changes
2024-10-22 00:39:16,023 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#209 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/209/)'
2024-10-22 00:39:16,853 [ scc.git] DEBUG [detached HEAD 23b3ac3] merge master -Dorg -Ssuccess-only
2024-10-22 00:39:16,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:39:16,854 [ scc.repo] DEBUG ## PRs found:
2024-10-22 00:39:17,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-22 00:39:17,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-22 00:39:18,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-22 00:39:18,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:19,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:39:19,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-22 00:39:20,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:20,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-22 00:39:21,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-22 00:39:21,139 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-22 00:39:21,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-22 00:39:22,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-22 00:39:22,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-22 00:39:22,526 [ scc.repo] DEBUG # ... Include label: include
2024-10-22 00:39:23,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-22 00:39:23,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:24,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:39:24,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-22 00:39:24,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:25,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-22 00:39:25,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-22 00:39:25,681 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-22 00:39:26,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-22 00:39:26,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-22 00:39:27,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-22 00:39:27,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:28,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:39:28,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-22 00:39:29,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:29,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-22 00:39:29,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-22 00:39:29,923 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-22 00:39:30,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-22 00:39:30,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-22 00:39:31,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-22 00:39:31,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:32,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:39:32,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-22 00:39:33,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-22 00:39:33,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:34,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:39:34,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-22 00:39:35,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:35,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-22 00:39:36,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-22 00:39:36,181 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-22 00:39:36,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-22 00:39:36,632 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-22 00:39:37,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-22 00:39:37,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-22 00:39:38,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-22 00:39:38,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:38,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-22 00:39:39,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-22 00:39:39,340 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-22 00:39:39,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-22 00:39:40,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-22 00:39:40,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-22 00:39:41,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:41,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:39:42,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-22 00:39:42,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:43,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-22 00:39:43,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-22 00:39:43,558 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-22 00:39:44,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-22 00:39:44,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-22 00:39:44,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-22 00:39:45,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-22 00:39:45,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-22 00:39:46,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:46,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-22 00:39:47,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-22 00:39:47,294 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-22 00:39:47,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-22 00:39:48,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-22 00:39:48,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:49,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-22 00:39:49,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-22 00:39:49,620 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-22 00:39:50,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-22 00:39:50,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-22 00:39:51,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-22 00:39:51,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:52,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-22 00:39:52,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-22 00:39:52,502 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-22 00:39:52,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-22 00:39:53,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-22 00:39:53,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-22 00:39:54,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:39:54,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-22 00:39:55,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-22 00:39:55,223 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-22 00:39:55,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-22 00:39:56,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-22 00:39:56,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-22 00:39:57,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-22 00:39:57,091 [ scc.repo] DEBUG ## Branches found:
2024-10-22 00:39:57,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-22 00:39:57,092 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:39:57,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:39:57,096 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-22 00:39:57,099 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-22 00:39:57,100 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-22 00:39:57,104 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-22 00:39:57,108 [ scc.git] DEBUG Already up to date.
2024-10-22 00:39:57,108 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-22 00:39:58,632 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-22 00:39:58,632 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-22 00:39:58,637 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-22 00:39:58,951 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-22 00:39:58,951 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-22 00:39:58,957 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-22 00:39:59,431 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-22 00:39:59,431 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-22 00:39:59,436 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-22 00:39:59,729 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-22 00:39:59,730 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-22 00:39:59,734 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-22 00:40:00,244 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-22 00:40:00,244 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-22 00:40:00,255 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-22 00:40:00,551 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-22 00:40:00,551 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-22 00:40:00,556 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-22 00:40:00,839 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-22 00:40:00,839 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-22 00:40:00,844 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-22 00:40:01,283 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-22 00:40:01,283 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-22 00:40:01,288 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-22 00:40:02,155 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-22 00:40:02,155 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-22 00:40:02,161 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-22 00:40:02,540 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-22 00:40:02,541 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-22 00:40:02,547 [ scc.git] DEBUG ## Unique users: []
2024-10-22 00:40:02,548 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:40:02,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:02,554 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-22 00:40:02,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:02,576 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-22 00:40:02,732 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-22 00:40:02,732 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-22 00:40:02,733 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:02,737 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-22 00:40:02,737 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-22 00:40:02,737 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-22 00:40:02,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:02,874 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-22 00:40:02,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:02,890 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-22 00:40:03,213 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-22 00:40:03,213 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-22 00:40:03,214 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:03,222 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-22 00:40:03,222 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-22 00:40:03,222 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-22 00:40:03,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:03,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-22 00:40:03,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:03,377 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-22 00:40:03,398 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-22 00:40:03,399 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:03,402 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-22 00:40:03,402 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-22 00:40:03,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:03,778 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-22 00:40:03,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:03,795 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-22 00:40:04,046 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-22 00:40:04,047 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-22 00:40:04,048 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:04,051 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-22 00:40:04,051 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-22 00:40:04,052 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-22 00:40:04,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:04,184 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-22 00:40:04,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:04,199 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-22 00:40:04,299 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:04,302 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-22 00:40:04,302 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-22 00:40:04,302 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-22 00:40:04,302 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-22 00:40:04,302 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-22 00:40:04,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:04,564 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-22 00:40:04,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:04,581 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-22 00:40:04,626 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-22 00:40:04,627 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:04,630 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-22 00:40:04,630 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-22 00:40:04,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:04,949 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-22 00:40:04,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:04,967 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-22 00:40:05,209 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-22 00:40:05,211 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:05,216 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-22 00:40:05,217 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-22 00:40:05,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:05,378 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-22 00:40:05,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:05,400 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-22 00:40:05,567 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-22 00:40:05,568 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:05,577 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-22 00:40:05,577 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-22 00:40:05,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:05,764 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-22 00:40:05,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:05,783 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-22 00:40:05,890 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:05,893 [ scc.git] DEBUG .gitignore | 1 +
2024-10-22 00:40:05,893 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-22 00:40:05,893 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-22 00:40:06,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:06,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-22 00:40:06,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:06,199 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-22 00:40:06,273 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:06,277 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-22 00:40:06,277 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-22 00:40:06,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:06,568 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-22 00:40:06,608 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:40:06,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:06,613 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:40:06,650 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-22 00:40:06,657 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf2c330c10> has no local changes
2024-10-22 00:40:06,657 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#209 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/209/)'
2024-10-22 00:40:06,666 [ scc.git] DEBUG [detached HEAD 273ecb7e] merge master -Dorg -Ssuccess-only
2024-10-22 00:40:06,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:40:06,666 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-22 00:40:06,666 [ scc.repo] DEBUG ## PRs found:
2024-10-22 00:40:07,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-22 00:40:07,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-22 00:40:08,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-10-22 00:40:08,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-22 00:40:09,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:09,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:40:09,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-22 00:40:10,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-22 00:40:10,393 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-22 00:40:10,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-22 00:40:11,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-22 00:40:11,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-22 00:40:12,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-22 00:40:12,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-22 00:40:13,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-22 00:40:13,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-22 00:40:14,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:14,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-22 00:40:15,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-22 00:40:15,126 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-22 00:40:15,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-22 00:40:16,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-22 00:40:16,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-22 00:40:17,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-22 00:40:17,093 [ scc.repo] DEBUG ## Branches found:
2024-10-22 00:40:17,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-22 00:40:17,093 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:40:17,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:17,098 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-22 00:40:17,103 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-22 00:40:17,103 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-22 00:40:17,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-22 00:40:17,116 [ scc.git] DEBUG Already up to date.
2024-10-22 00:40:17,116 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-22 00:40:17,743 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-22 00:40:17,744 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-22 00:40:17,748 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-22 00:40:18,221 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-22 00:40:18,221 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-22 00:40:18,227 [ scc.git] DEBUG ## Unique users: []
2024-10-22 00:40:18,227 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:40:18,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:18,232 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-22 00:40:18,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:18,241 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-22 00:40:18,313 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-22 00:40:18,313 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-22 00:40:18,313 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-22 00:40:18,314 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-22 00:40:18,319 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-22 00:40:18,325 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-22 00:40:18,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:18,463 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-22 00:40:18,470 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-22 00:40:18,475 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#209](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/209/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/209/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-22 00:40:18,479 [ scc.config] DEBUG Found github.token
2024-10-22 00:40:18,479 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-22 00:40:18,480 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-22 00:40:18,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:18,488 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-22 00:40:18,544 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:18,547 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-22 00:40:18,547 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-22 00:40:18,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:18,850 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-22 00:40:18,892 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:40:18,893 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:18,898 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:40:18,938 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-22 00:40:18,943 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf2c344df0> has no local changes
2024-10-22 00:40:18,943 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#209 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/209/)'
2024-10-22 00:40:18,951 [ scc.git] DEBUG [detached HEAD 7672b96] merge master -Dorg -Ssuccess-only
2024-10-22 00:40:18,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:40:18,952 [ scc.repo] DEBUG ## PRs found:
2024-10-22 00:40:19,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-22 00:40:19,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/588 HTTP/1.1" 200 None
2024-10-22 00:40:20,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/588/comments HTTP/1.1" 200 None
2024-10-22 00:40:20,407 [ scc.repo] DEBUG # ... Include label: include
2024-10-22 00:40:20,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66 HTTP/1.1" 200 None
2024-10-22 00:40:21,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:22,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:40:22,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66 HTTP/1.1" 200 None
2024-10-22 00:40:22,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66?per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:23,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66 HTTP/1.1" 200 None
2024-10-22 00:40:23,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66/status HTTP/1.1" 200 None
2024-10-22 00:40:23,784 [ scc.repo] DEBUG - PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
2024-10-22 00:40:24,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-22 00:40:24,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-22 00:40:25,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-22 00:40:25,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:26,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:40:26,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-22 00:40:27,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:27,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-22 00:40:28,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-22 00:40:28,062 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-22 00:40:28,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-22 00:40:28,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-22 00:40:29,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-22 00:40:29,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-22 00:40:30,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:30,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:40:31,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-22 00:40:31,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:32,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-22 00:40:32,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-22 00:40:32,664 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-22 00:40:33,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-10-22 00:40:33,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568/comments HTTP/1.1" 200 None
2024-10-22 00:40:33,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-22 00:40:34,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-22 00:40:34,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-22 00:40:35,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-22 00:40:35,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-22 00:40:36,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:36,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:40:37,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-22 00:40:37,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:38,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-22 00:40:38,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-22 00:40:38,441 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-22 00:40:38,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-22 00:40:39,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-22 00:40:40,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-22 00:40:40,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:41,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:40:41,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-22 00:40:42,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:42,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-22 00:40:43,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-22 00:40:43,161 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-22 00:40:43,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-22 00:40:44,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-22 00:40:44,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-22 00:40:45,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-22 00:40:45,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-22 00:40:45,486 [ scc.repo] DEBUG ## Branches found:
2024-10-22 00:40:45,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-22 00:40:45,486 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:40:45,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:45,491 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-22 00:40:45,495 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-22 00:40:45,496 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-22 00:40:45,603 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-22 00:40:45,610 [ scc.git] DEBUG Already up to date.
2024-10-22 00:40:45,610 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-22 00:40:46,589 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-22 00:40:46,589 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-22 00:40:46,597 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-22 00:40:47,045 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-22 00:40:47,045 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-22 00:40:47,050 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-22 00:40:47,692 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-22 00:40:47,693 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-22 00:40:47,697 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-22 00:40:48,139 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-22 00:40:48,139 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-22 00:40:48,144 [ scc.git] DEBUG Calling 'git fetch origin pull/588/head'
2024-10-22 00:40:48,588 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-22 00:40:48,588 [ scc.git] DEBUG * branch refs/pull/588/head -> FETCH_HEAD
2024-10-22 00:40:48,594 [ scc.git] DEBUG ## Unique users: []
2024-10-22 00:40:48,594 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:40:48,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:48,600 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-22 00:40:48,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:48,616 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-22 00:40:49,014 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-22 00:40:49,015 [ scc.git] DEBUG Auto-merging setup.py
2024-10-22 00:40:49,016 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:49,020 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-22 00:40:49,020 [ scc.git] DEBUG setup.py | 1 +
2024-10-22 00:40:49,020 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-22 00:40:49,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:49,158 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-22 00:40:49,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:49,171 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-22 00:40:49,564 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-22 00:40:49,565 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-22 00:40:49,566 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:49,571 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-22 00:40:49,571 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-22 00:40:49,571 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-22 00:40:49,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:49,701 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-22 00:40:49,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:49,713 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-22 00:40:49,901 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:49,906 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-22 00:40:49,906 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-22 00:40:50,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:50,151 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-22 00:40:50,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:50,164 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-22 00:40:50,346 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:50,349 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-22 00:40:50,349 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-22 00:40:50,349 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-22 00:40:50,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:50,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66'
2024-10-22 00:40:50,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:50,546 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 588 (rf(py314): Replace deprecated pkgutil.find_loader) 31d5f5adcab1ceed141648f48e5b5fc1c0b5ee66'
2024-10-22 00:40:50,648 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-22 00:40:50,651 [ scc.git] DEBUG omeroweb/urls.py | 4 ++--
2024-10-22 00:40:50,651 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2024-10-22 00:40:50,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:50,923 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-22 00:40:50,960 [ scc.git] DEBUG Get sha1 of %s
2024-10-22 00:40:50,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-22 00:40:50,964 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:40:51,001 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-22 00:40:51,010 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf2c297640> has no local changes
2024-10-22 00:40:51,010 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
Generated by OMERO-python-superbuild-push#209 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/209/)'
2024-10-22 00:40:51,019 [ scc.git] DEBUG [detached HEAD 49f928c90] merge master -Dorg -Ssuccess-only
2024-10-22 00:40:51,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:40:51,020 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-22 00:40:51,064 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-22 00:40:51,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:51,327 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-22 00:40:51,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:51,715 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-22 00:40:52,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:52,089 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-22 00:40:52,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:52,480 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-22 00:40:52,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-22 00:40:52,860 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-22 00:40:52,886 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf2d0d0fd0> has local changes
2024-10-22 00:40:52,886 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
Generated by OMERO-python-superbuild-push#209 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/209/)'
2024-10-22 00:40:52,895 [ scc.git] DEBUG [detached HEAD 6cfe55d] merge master -Dorg -Ssuccess-only
2024-10-22 00:40:52,895 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-22 00:40:52,896 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-22 00:40:52,896 [ scc.merge] INFO Already up to date.
2024-10-22 00:40:52,896 [ scc.merge] INFO
2024-10-22 00:40:52,896 [ scc.merge] INFO Merged PRs:
2024-10-22 00:40:52,896 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-22 00:40:52,896 [ scc.merge] INFO
2024-10-22 00:40:52,896 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-22 00:40:52,896 [ scc.merge] INFO Already up to date.
2024-10-22 00:40:52,896 [ scc.merge] INFO
2024-10-22 00:40:52,896 [ scc.merge] INFO Merged PRs:
2024-10-22 00:40:52,896 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-22 00:40:52,896 [ scc.merge] INFO
2024-10-22 00:40:52,896 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-22 00:40:52,896 [ scc.merge] INFO Excluded PRs:
2024-10-22 00:40:52,896 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-22 00:40:52,896 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-22 00:40:52,896 [ scc.merge] INFO Already up to date.
2024-10-22 00:40:52,896 [ scc.merge] INFO
2024-10-22 00:40:52,896 [ scc.merge] INFO Merged PRs:
2024-10-22 00:40:52,896 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-22 00:40:52,896 [ scc.merge] INFO
2024-10-22 00:40:52,896 [ scc.merge] INFO Repository: ome/omero-py
2024-10-22 00:40:52,896 [ scc.merge] INFO Excluded PRs:
2024-10-22 00:40:52,896 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-22 00:40:52,896 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-22 00:40:52,896 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-22 00:40:52,896 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-22 00:40:52,896 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-22 00:40:52,896 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-22 00:40:52,897 [ scc.merge] INFO Already up to date.
2024-10-22 00:40:52,897 [ scc.merge] INFO
2024-10-22 00:40:52,897 [ scc.merge] INFO Merged PRs:
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-22 00:40:52,897 [ scc.merge] INFO
2024-10-22 00:40:52,897 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-22 00:40:52,897 [ scc.merge] INFO Excluded PRs:
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-22 00:40:52,897 [ scc.merge] INFO Already up to date.
2024-10-22 00:40:52,897 [ scc.merge] INFO
2024-10-22 00:40:52,897 [ scc.merge] INFO Merged PRs:
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-22 00:40:52,897 [ scc.merge] INFO
2024-10-22 00:40:52,897 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-22 00:40:52,897 [ scc.merge] INFO
2024-10-22 00:40:52,897 [ scc.merge] INFO Repository: ome/omero-web
2024-10-22 00:40:52,897 [ scc.merge] INFO Excluded PRs:
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-22 00:40:52,897 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-22 00:40:52,897 [ scc.merge] INFO Already up to date.
2024-10-22 00:40:52,897 [ scc.merge] INFO
2024-10-22 00:40:52,898 [ scc.merge] INFO Merged PRs:
2024-10-22 00:40:52,898 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-22 00:40:52,898 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-22 00:40:52,898 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-22 00:40:52,898 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-22 00:40:52,898 [ scc.merge] INFO - PR 588 effigies 'rf(py314): Replace deprecated pkgutil.find_loader'
2024-10-22 00:40:52,898 [ scc.merge] INFO
2024-10-22 00:40:52,898 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-22 00:40:52,898 [ scc.git] DEBUG Calling 'git remote'
2024-10-22 00:40:52,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-22 00:40:52,902 [ scc.git] DEBUG Calling 'git remote'
2024-10-22 00:40:52,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:40:52,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-22 00:40:52,905 [ scc.git] DEBUG Calling 'git remote'
2024-10-22 00:40:52,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:40:52,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-22 00:40:52,909 [ scc.git] DEBUG Calling 'git remote'
2024-10-22 00:40:52,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:40:52,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-22 00:40:52,913 [ scc.git] DEBUG Calling 'git remote'
2024-10-22 00:40:52,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-22 00:40:52,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-22 00:40:52,916 [ scc.git] DEBUG Calling 'git remote'
2024-10-22 00:40:52,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-22 00:41:21,069 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/03a0bb70/images/svgs/logo.svg){kind=logo}
