Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-10-26 00:32:36,285 [ scc.config] DEBUG Found github.token
2024-10-26 00:32:36,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-26 00:32:36,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:32:36,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:32:37,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-26 00:32:37,254 [ scc.gh] DEBUG 4359 remaining from 5000 (Reset at 00:10
2024-10-26 00:32:37,254 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-26 00:32:37,258 [ scc.git] DEBUG Check current status
2024-10-26 00:32:37,259 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-26 00:32:37,262 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-26 00:32:37,262 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-26 00:32:37,303 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-26 00:32:37,306 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-26 00:32:37,310 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-26 00:32:37,313 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-26 00:32:37,317 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-26 00:32:37,321 [ scc.config] DEBUG Found remote.origin.url
2024-10-26 00:32:37,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-26 00:32:38,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-26 00:32:38,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-26 00:32:39,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-26 00:32:39,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-26 00:32:39,479 [ scc.git] DEBUG Resetting...
2024-10-26 00:32:39,479 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-26 00:32:39,487 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-26 00:32:39,487 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-26 00:32:39,540 [ scc.git] DEBUG Check current status
2024-10-26 00:32:39,540 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-26 00:32:39,544 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-10-26 00:32:39,545 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-26 00:32:39,584 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-26 00:32:39,587 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-26 00:32:39,590 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-10-26 00:32:39,596 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-26 00:32:39,600 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-26 00:32:39,601 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-26 00:32:39,601 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-26 00:32:39,602 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-26 00:32:39,602 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-26 00:32:39,602 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-26 00:32:39,602 [ scc.repo] DEBUG ## PRs found:
2024-10-26 00:32:39,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-26 00:32:40,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-26 00:32:40,390 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-26 00:32:40,390 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-26 00:32:40,390 [ scc.repo] DEBUG ## Branches found:
2024-10-26 00:32:40,390 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:32:40,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:32:40,396 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-26 00:32:40,400 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-26 00:32:40,401 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-26 00:32:40,406 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-26 00:32:40,411 [ scc.git] DEBUG Already up to date.
2024-10-26 00:32:40,411 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-26 00:32:40,730 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-26 00:32:40,730 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-26 00:32:40,737 [ scc.git] DEBUG ## Unique users: []
2024-10-26 00:32:40,738 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:32:40,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:32:40,743 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-26 00:32:40,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:32:40,751 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-26 00:32:40,760 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:32:40,762 [ scc.git] DEBUG omero-py | 2 +-
2024-10-26 00:32:40,762 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2024-10-26 00:32:40,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:32:40,915 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-26 00:32:41,036 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-10-26 00:32:41,036 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:32:41,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:32:41,041 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-26 00:32:41,195 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8ea6f6a8b0> has no local changes
2024-10-26 00:32:41,195 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Generated by OMERO-python-superbuild-push#214 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/214/)'
2024-10-26 00:32:41,221 [ scc.git] DEBUG [detached HEAD 2f3f16f] merge master -Dorg -Snone
2024-10-26 00:32:41,221 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-26 00:32:41,221 [ scc.merge] INFO Already up to date.
2024-10-26 00:32:41,221 [ scc.merge] INFO
2024-10-26 00:32:41,221 [ scc.merge] INFO Merged PRs:
2024-10-26 00:32:41,221 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-26 00:32:41,222 [ scc.merge] INFO
2024-10-26 00:32:41,222 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-26 00:32:41,222 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-26 00:32:43,405 [ scc.config] DEBUG Found github.token
2024-10-26 00:32:43,408 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-10-26 00:32:43,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:32:43,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:32:44,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-10-26 00:32:44,354 [ scc.gh] DEBUG 4349 remaining from 5000 (Reset at 00:10
2024-10-26 00:32:44,355 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-26 00:32:44,360 [ scc.git] DEBUG Check current status
2024-10-26 00:32:44,360 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-26 00:32:44,363 [ scc.git] DEBUG 2f3f16f merge master -Dorg -Snone
2024-10-26 00:32:44,364 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-26 00:32:44,401 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-26 00:32:44,403 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-26 00:32:44,406 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-26 00:32:44,410 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-26 00:32:44,413 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-26 00:32:44,417 [ scc.config] DEBUG Found remote.origin.url
2024-10-26 00:32:44,417 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-10-26 00:32:44,419 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-10-26 00:32:44,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-10-26 00:32:45,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-26 00:32:45,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-26 00:32:46,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-26 00:32:46,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-26 00:32:46,453 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:32:46,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-26 00:32:46,500 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-26 00:32:46,505 [ scc.git] DEBUG Check current status
2024-10-26 00:32:46,505 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-26 00:32:46,509 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-10-26 00:32:46,509 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-26 00:32:46,554 [ scc.config] DEBUG Found remote.origin.url
2024-10-26 00:32:46,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-10-26 00:32:47,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-26 00:32:47,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-26 00:32:48,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-26 00:32:48,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-26 00:32:48,584 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:32:48,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:32:48,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-26 00:32:48,626 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-26 00:32:48,630 [ scc.git] DEBUG Check current status
2024-10-26 00:32:48,630 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-26 00:32:48,635 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-10-26 00:32:48,636 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-26 00:32:48,679 [ scc.config] DEBUG Found remote.origin.url
2024-10-26 00:32:49,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-10-26 00:32:49,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-26 00:32:49,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-26 00:32:50,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-26 00:32:50,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-26 00:32:50,737 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:32:50,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:32:50,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-26 00:32:50,781 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-26 00:32:50,785 [ scc.git] DEBUG Check current status
2024-10-26 00:32:50,786 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-26 00:32:50,790 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-10-26 00:32:50,790 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-26 00:32:50,837 [ scc.config] DEBUG Found remote.origin.url
2024-10-26 00:32:51,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-10-26 00:32:51,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-26 00:32:52,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-26 00:32:52,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-26 00:32:52,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-26 00:32:52,852 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:32:52,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:32:52,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-26 00:32:52,893 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-26 00:32:52,897 [ scc.git] DEBUG Check current status
2024-10-26 00:32:52,897 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-26 00:32:52,901 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-26 00:32:52,901 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-26 00:32:52,943 [ scc.config] DEBUG Found remote.origin.url
2024-10-26 00:32:52,944 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-10-26 00:32:53,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-10-26 00:32:53,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-26 00:32:54,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-26 00:32:54,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-26 00:32:54,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-26 00:32:54,962 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:32:55,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:32:55,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-26 00:32:55,004 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-10-26 00:32:55,008 [ scc.git] DEBUG Check current status
2024-10-26 00:32:55,008 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-26 00:32:55,061 [ scc.git] DEBUG da5b7d11f Bump version: 5.27.2 → 5.27.3.dev0
2024-10-26 00:32:55,061 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-26 00:32:55,103 [ scc.config] DEBUG Found remote.origin.url
2024-10-26 00:32:55,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-10-26 00:32:55,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-10-26 00:32:56,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-10-26 00:32:56,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-10-26 00:32:57,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-10-26 00:32:57,093 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:32:57,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:32:57,135 [ scc.git] DEBUG Resetting...
2024-10-26 00:32:57,135 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-10-26 00:32:57,142 [ scc.git] DEBUG HEAD is now at 2f3f16f merge master -Dorg -Snone
2024-10-26 00:32:57,142 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-10-26 00:32:57,198 [ scc.git] DEBUG Check current status
2024-10-26 00:32:57,199 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-10-26 00:32:57,203 [ scc.git] DEBUG 2f3f16f merge master -Dorg -Snone
2024-10-26 00:32:57,204 [ scc.git] DEBUG Calling 'git submodule status'
2024-10-26 00:32:57,248 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-10-26 00:32:57,251 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-10-26 00:32:57,255 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-10-26 00:32:57,259 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-10-26 00:32:57,263 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-10-26 00:32:57,264 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-10-26 00:32:57,264 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-10-26 00:32:57,264 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-10-26 00:32:57,264 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-10-26 00:32:57,264 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-10-26 00:32:57,264 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-10-26 00:32:57,264 [ scc.repo] DEBUG ## PRs found:
2024-10-26 00:32:57,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-10-26 00:32:57,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-10-26 00:32:57,992 [ scc.repo] DEBUG # ... Include label: dependencies
2024-10-26 00:32:58,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-26 00:32:58,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:32:59,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-10-26 00:33:00,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-10-26 00:33:00,026 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-26 00:33:00,026 [ scc.repo] DEBUG ## Branches found:
2024-10-26 00:33:00,026 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:00,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:00,031 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-26 00:33:00,036 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-26 00:33:00,036 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-26 00:33:00,040 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-26 00:33:00,045 [ scc.git] DEBUG Already up to date.
2024-10-26 00:33:00,045 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-10-26 00:33:00,372 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-10-26 00:33:00,372 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD
2024-10-26 00:33:00,378 [ scc.git] DEBUG ## Unique users: []
2024-10-26 00:33:00,378 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:00,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:00,383 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-10-26 00:33:00,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:00,394 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-10-26 00:33:00,399 [ scc.git] DEBUG Already up to date.
2024-10-26 00:33:00,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:00,532 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-26 00:33:00,577 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:00,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:00,582 [ scc.repo] DEBUG ## PRs found:
2024-10-26 00:33:00,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-10-26 00:33:01,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-10-26 00:33:02,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-10-26 00:33:02,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-26 00:33:03,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:03,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-10-26 00:33:03,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-10-26 00:33:03,940 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-26 00:33:03,940 [ scc.repo] DEBUG ## Branches found:
2024-10-26 00:33:03,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-26 00:33:03,940 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:03,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:03,945 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-26 00:33:03,949 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-26 00:33:03,949 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-26 00:33:03,954 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-26 00:33:03,959 [ scc.git] DEBUG Already up to date.
2024-10-26 00:33:03,959 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-10-26 00:33:04,348 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-10-26 00:33:04,348 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-10-26 00:33:04,353 [ scc.git] DEBUG ## Unique users: []
2024-10-26 00:33:04,353 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:04,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:04,358 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-26 00:33:04,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:04,367 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-10-26 00:33:04,380 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-10-26 00:33:04,381 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-10-26 00:33:04,381 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-10-26 00:33:04,381 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-10-26 00:33:04,381 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-10-26 00:33:04,381 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-10-26 00:33:04,381 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-10-26 00:33:04,381 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-10-26 00:33:04,381 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-10-26 00:33:04,381 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:04,385 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-10-26 00:33:04,385 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-10-26 00:33:04,385 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-10-26 00:33:04,385 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-10-26 00:33:04,385 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-10-26 00:33:04,385 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-10-26 00:33:04,385 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-10-26 00:33:04,385 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-10-26 00:33:04,385 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-10-26 00:33:04,387 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-10-26 00:33:04,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:04,520 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-26 00:33:04,559 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:04,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:04,563 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:33:04,599 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-26 00:33:04,604 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3d9e31a9a0> has no local changes
2024-10-26 00:33:04,605 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#214 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/214/)'
2024-10-26 00:33:04,612 [ scc.git] DEBUG [detached HEAD be79a55] merge master -Dorg -Ssuccess-only
2024-10-26 00:33:04,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:33:04,613 [ scc.repo] DEBUG ## PRs found:
2024-10-26 00:33:05,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-10-26 00:33:05,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-10-26 00:33:05,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-10-26 00:33:06,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-26 00:33:06,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:07,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-10-26 00:33:07,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-10-26 00:33:07,750 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-26 00:33:08,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-10-26 00:33:08,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-10-26 00:33:09,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-10-26 00:33:09,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-10-26 00:33:09,546 [ scc.repo] DEBUG ## Branches found:
2024-10-26 00:33:09,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-26 00:33:09,546 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:09,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:09,552 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-26 00:33:09,556 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-26 00:33:09,556 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-26 00:33:09,560 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-26 00:33:09,564 [ scc.git] DEBUG Already up to date.
2024-10-26 00:33:09,564 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-10-26 00:33:09,895 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-10-26 00:33:09,896 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-10-26 00:33:09,901 [ scc.git] DEBUG ## Unique users: []
2024-10-26 00:33:09,901 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:09,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:09,906 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-26 00:33:09,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:09,918 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-10-26 00:33:09,929 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-10-26 00:33:09,930 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:09,933 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-10-26 00:33:09,933 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-10-26 00:33:09,933 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-10-26 00:33:10,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:10,071 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-26 00:33:10,107 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:10,107 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:10,111 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:33:10,148 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-26 00:33:10,153 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3d9e2b4820> has no local changes
2024-10-26 00:33:10,153 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#214 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/214/)'
2024-10-26 00:33:10,160 [ scc.git] DEBUG [detached HEAD 8e3a5da] merge master -Dorg -Ssuccess-only
2024-10-26 00:33:10,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:33:10,161 [ scc.repo] DEBUG ## PRs found:
2024-10-26 00:33:10,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-10-26 00:33:11,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-10-26 00:33:11,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-26 00:33:12,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:12,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:33:13,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-26 00:33:13,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:14,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-10-26 00:33:14,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-10-26 00:33:14,556 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-26 00:33:15,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-10-26 00:33:15,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-10-26 00:33:15,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-10-26 00:33:15,938 [ scc.repo] DEBUG # ... Include label: include
2024-10-26 00:33:16,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-26 00:33:16,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:17,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:33:17,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-26 00:33:18,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:18,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-10-26 00:33:19,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-10-26 00:33:19,032 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation'
2024-10-26 00:33:19,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-10-26 00:33:19,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-10-26 00:33:20,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-26 00:33:20,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:21,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:33:21,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-26 00:33:22,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:22,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-10-26 00:33:23,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-10-26 00:33:23,181 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-10-26 00:33:23,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-10-26 00:33:24,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-10-26 00:33:24,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-10-26 00:33:25,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:25,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:33:25,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-10-26 00:33:26,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-26 00:33:26,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:27,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:33:27,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-26 00:33:28,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:28,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-10-26 00:33:29,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-10-26 00:33:29,011 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-10-26 00:33:29,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-10-26 00:33:29,503 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-10-26 00:33:29,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-10-26 00:33:30,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-10-26 00:33:30,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-26 00:33:31,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:31,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-10-26 00:33:32,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-10-26 00:33:32,192 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-26 00:33:32,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-10-26 00:33:33,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-10-26 00:33:33,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-26 00:33:34,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:34,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:33:34,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-26 00:33:35,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:35,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-10-26 00:33:36,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-10-26 00:33:36,221 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-10-26 00:33:36,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-10-26 00:33:37,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-10-26 00:33:37,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-10-26 00:33:38,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-10-26 00:33:38,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-26 00:33:38,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:39,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-10-26 00:33:39,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-10-26 00:33:39,835 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-26 00:33:40,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-10-26 00:33:40,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-26 00:33:41,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:41,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-10-26 00:33:42,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-10-26 00:33:42,102 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-26 00:33:42,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-10-26 00:33:43,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-10-26 00:33:43,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-26 00:33:43,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:44,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-10-26 00:33:44,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-10-26 00:33:44,911 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-26 00:33:45,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-10-26 00:33:45,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-10-26 00:33:46,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-26 00:33:46,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:47,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-10-26 00:33:47,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-10-26 00:33:47,642 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-10-26 00:33:48,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-10-26 00:33:48,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-10-26 00:33:48,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-10-26 00:33:49,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-10-26 00:33:49,393 [ scc.repo] DEBUG ## Branches found:
2024-10-26 00:33:49,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-26 00:33:49,394 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:49,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:49,399 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-26 00:33:49,405 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-26 00:33:49,405 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-26 00:33:49,411 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-26 00:33:49,416 [ scc.git] DEBUG Already up to date.
2024-10-26 00:33:49,417 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-10-26 00:33:49,777 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-26 00:33:49,777 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-10-26 00:33:49,782 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-10-26 00:33:50,082 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-26 00:33:50,082 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-10-26 00:33:50,087 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-10-26 00:33:50,380 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-26 00:33:50,380 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-10-26 00:33:50,385 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-10-26 00:33:50,672 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-26 00:33:50,673 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-10-26 00:33:50,679 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-10-26 00:33:50,967 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-26 00:33:50,967 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-10-26 00:33:50,972 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-10-26 00:33:51,252 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-26 00:33:51,253 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-10-26 00:33:51,259 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-10-26 00:33:51,608 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-26 00:33:51,609 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-10-26 00:33:51,613 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-10-26 00:33:52,213 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-26 00:33:52,214 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-10-26 00:33:52,219 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-10-26 00:33:52,732 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-26 00:33:52,732 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD
2024-10-26 00:33:52,737 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-10-26 00:33:53,159 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-10-26 00:33:53,160 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD
2024-10-26 00:33:53,165 [ scc.git] DEBUG ## Unique users: []
2024-10-26 00:33:53,166 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:53,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:53,171 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-26 00:33:53,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:53,187 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-10-26 00:33:53,212 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-10-26 00:33:53,212 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-10-26 00:33:53,213 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:53,217 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-10-26 00:33:53,217 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-10-26 00:33:53,217 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-10-26 00:33:53,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:53,394 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-26 00:33:53,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:53,411 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-10-26 00:33:53,445 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-26 00:33:53,445 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-10-26 00:33:53,446 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:53,453 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-10-26 00:33:53,453 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-10-26 00:33:53,453 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-10-26 00:33:53,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:53,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-26 00:33:53,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:53,794 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-10-26 00:33:53,817 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-10-26 00:33:53,818 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:53,821 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-10-26 00:33:53,821 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-10-26 00:33:54,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:54,160 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-26 00:33:54,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:54,177 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-10-26 00:33:54,198 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-10-26 00:33:54,198 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-10-26 00:33:54,199 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:54,202 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-10-26 00:33:54,202 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-10-26 00:33:54,202 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-10-26 00:33:54,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:54,549 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-26 00:33:54,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:54,565 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-10-26 00:33:54,583 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:54,586 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-10-26 00:33:54,586 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-10-26 00:33:54,586 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-10-26 00:33:54,586 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-10-26 00:33:54,586 [ scc.git] DEBUG create mode 100644 connect.py
2024-10-26 00:33:54,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:54,937 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-26 00:33:54,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:54,953 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-10-26 00:33:54,973 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-10-26 00:33:54,974 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:54,977 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-10-26 00:33:54,977 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-10-26 00:33:55,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:55,314 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-10-26 00:33:55,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:55,331 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-10-26 00:33:55,350 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-10-26 00:33:55,351 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:55,354 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-10-26 00:33:55,354 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-10-26 00:33:55,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:55,698 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-26 00:33:55,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:55,715 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-10-26 00:33:55,750 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-10-26 00:33:55,751 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:55,759 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-10-26 00:33:55,759 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-10-26 00:33:56,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:56,077 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-26 00:33:56,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:56,095 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-10-26 00:33:56,114 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:56,117 [ scc.git] DEBUG .gitignore | 1 +
2024-10-26 00:33:56,117 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++-----
2024-10-26 00:33:56,117 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-)
2024-10-26 00:33:56,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:56,464 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-26 00:33:56,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:56,482 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-10-26 00:33:56,501 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:33:56,503 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 +
2024-10-26 00:33:56,503 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2024-10-26 00:33:56,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:33:56,845 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-26 00:33:56,889 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:33:56,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:33:56,893 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:33:56,928 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-26 00:33:56,934 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3d9d250c70> has no local changes
2024-10-26 00:33:56,935 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Generated by OMERO-python-superbuild-push#214 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/214/)'
2024-10-26 00:33:56,943 [ scc.git] DEBUG [detached HEAD c8e8e184] merge master -Dorg -Ssuccess-only
2024-10-26 00:33:56,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:33:56,944 [ scc.git] INFO Overriding base-branch from master to develop
2024-10-26 00:33:56,944 [ scc.repo] DEBUG ## PRs found:
2024-10-26 00:33:57,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-10-26 00:33:57,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-10-26 00:33:58,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-10-26 00:33:58,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-26 00:33:59,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:33:59,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:34:00,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-10-26 00:34:00,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-10-26 00:34:00,503 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-26 00:34:00,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-10-26 00:34:01,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-10-26 00:34:01,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-10-26 00:34:02,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-10-26 00:34:03,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-10-26 00:34:03,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-10-26 00:34:04,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-26 00:34:04,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:04,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-10-26 00:34:05,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-10-26 00:34:05,367 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-26 00:34:05,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-10-26 00:34:06,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-10-26 00:34:06,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-10-26 00:34:07,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-10-26 00:34:07,277 [ scc.repo] DEBUG ## Branches found:
2024-10-26 00:34:07,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-26 00:34:07,278 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:34:07,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:07,282 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-10-26 00:34:07,286 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-26 00:34:07,287 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-10-26 00:34:07,292 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-10-26 00:34:07,296 [ scc.git] DEBUG Already up to date.
2024-10-26 00:34:07,297 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-10-26 00:34:08,026 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-26 00:34:08,026 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-10-26 00:34:08,031 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-10-26 00:34:08,308 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-10-26 00:34:08,308 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-10-26 00:34:08,312 [ scc.git] DEBUG ## Unique users: []
2024-10-26 00:34:08,312 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:34:08,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:08,317 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-26 00:34:08,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:08,326 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-26 00:34:08,335 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-10-26 00:34:08,336 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-10-26 00:34:08,336 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-10-26 00:34:08,336 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-10-26 00:34:08,340 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-26 00:34:08,345 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-10-26 00:34:08,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:08,472 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-10-26 00:34:08,480 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-10-26 00:34:08,484 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#214](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/214/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/214/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-10-26 00:34:08,488 [ scc.config] DEBUG Found github.token
2024-10-26 00:34:08,488 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-10-26 00:34:08,488 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-26 00:34:08,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:08,496 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-10-26 00:34:08,712 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:34:08,715 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-10-26 00:34:08,715 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-10-26 00:34:08,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:08,859 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-26 00:34:08,925 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:34:08,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:08,930 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:34:08,965 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-26 00:34:08,970 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3d9d264be0> has no local changes
2024-10-26 00:34:08,970 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#214 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/214/)'
2024-10-26 00:34:08,977 [ scc.git] DEBUG [detached HEAD 7a7e575] merge master -Dorg -Ssuccess-only
2024-10-26 00:34:08,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:34:08,978 [ scc.repo] DEBUG ## PRs found:
2024-10-26 00:34:09,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-10-26 00:34:10,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/589 HTTP/1.1" 200 None
2024-10-26 00:34:10,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-26 00:34:11,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:11,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:34:11,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-26 00:34:12,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/33cf0eb27577cdf0651aa994cfd52add56f49459?per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:12,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459 HTTP/1.1" 200 None
2024-10-26 00:34:13,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/33cf0eb27577cdf0651aa994cfd52add56f49459/status HTTP/1.1" 200 None
2024-10-26 00:34:13,364 [ scc.repo] DEBUG - PR 589 knabar 'Remove Python 2 compatibility import'
2024-10-26 00:34:13,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-10-26 00:34:14,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-10-26 00:34:14,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583/comments HTTP/1.1" 200 None
2024-10-26 00:34:15,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-26 00:34:15,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:16,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:34:16,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-26 00:34:17,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/aa50f469842b9687c74df8765d72241e6e37d32c?per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:17,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c HTTP/1.1" 200 None
2024-10-26 00:34:17,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/aa50f469842b9687c74df8765d72241e6e37d32c/status HTTP/1.1" 200 None
2024-10-26 00:34:17,986 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-26 00:34:18,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-10-26 00:34:18,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-10-26 00:34:19,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/580 HTTP/1.1" 200 None
2024-10-26 00:34:19,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-26 00:34:20,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:20,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:34:21,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-26 00:34:21,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc?per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:22,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc HTTP/1.1" 200 None
2024-10-26 00:34:22,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc/status HTTP/1.1" 200 None
2024-10-26 00:34:22,601 [ scc.repo] DEBUG - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-26 00:34:23,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-10-26 00:34:23,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-10-26 00:34:23,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-10-26 00:34:24,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-10-26 00:34:24,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-26 00:34:25,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:25,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:34:26,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-26 00:34:26,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:27,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-10-26 00:34:27,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-10-26 00:34:27,549 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-26 00:34:27,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-10-26 00:34:28,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-10-26 00:34:29,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-26 00:34:29,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:30,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:34:30,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-26 00:34:31,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:31,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-10-26 00:34:31,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-10-26 00:34:31,929 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-26 00:34:32,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-10-26 00:34:32,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-10-26 00:34:33,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-10-26 00:34:33,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-10-26 00:34:34,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-10-26 00:34:34,314 [ scc.repo] DEBUG ## Branches found:
2024-10-26 00:34:34,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-26 00:34:34,315 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:34:34,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:34,320 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-10-26 00:34:34,324 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-10-26 00:34:34,324 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-10-26 00:34:34,328 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-10-26 00:34:34,333 [ scc.git] DEBUG Already up to date.
2024-10-26 00:34:34,333 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-10-26 00:34:34,637 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-26 00:34:34,638 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-10-26 00:34:34,643 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-10-26 00:34:34,954 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-26 00:34:34,954 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-10-26 00:34:34,959 [ scc.git] DEBUG Calling 'git fetch origin pull/580/head'
2024-10-26 00:34:35,259 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-26 00:34:35,259 [ scc.git] DEBUG * branch refs/pull/580/head -> FETCH_HEAD
2024-10-26 00:34:35,264 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-10-26 00:34:35,709 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-26 00:34:35,709 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD
2024-10-26 00:34:35,714 [ scc.git] DEBUG Calling 'git fetch origin pull/589/head'
2024-10-26 00:34:35,993 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-10-26 00:34:35,994 [ scc.git] DEBUG * branch refs/pull/589/head -> FETCH_HEAD
2024-10-26 00:34:35,998 [ scc.git] DEBUG ## Unique users: []
2024-10-26 00:34:35,999 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:34:35,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:36,003 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-26 00:34:36,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:36,014 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-10-26 00:34:36,368 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-10-26 00:34:36,368 [ scc.git] DEBUG Auto-merging setup.py
2024-10-26 00:34:36,369 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:34:36,373 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-10-26 00:34:36,373 [ scc.git] DEBUG setup.py | 1 +
2024-10-26 00:34:36,373 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-10-26 00:34:36,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:36,514 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-26 00:34:36,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:36,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-10-26 00:34:36,549 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-10-26 00:34:36,550 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-10-26 00:34:36,551 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:34:36,555 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-10-26 00:34:36,555 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-10-26 00:34:36,555 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-10-26 00:34:36,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:36,894 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-26 00:34:36,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:36,906 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 580 (omeroweb.webgateway.obj_id_bitmask: handle empty query results) 1c8ad8d1dd0e0fd1abaf6a3d74c439d73a2ffacc'
2024-10-26 00:34:37,030 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:34:37,035 [ scc.git] DEBUG omeroweb/webgateway/views.py | 6 ++++++
2024-10-26 00:34:37,035 [ scc.git] DEBUG 1 file changed, 6 insertions(+)
2024-10-26 00:34:37,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:37,280 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-26 00:34:37,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:37,293 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to show data from all users in that group) aa50f469842b9687c74df8765d72241e6e37d32c'
2024-10-26 00:34:37,421 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:34:37,425 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 6 +++++-
2024-10-26 00:34:37,425 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 --
2024-10-26 00:34:37,425 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 3 deletions(-)
2024-10-26 00:34:37,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:37,660 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...33cf0eb27577cdf0651aa994cfd52add56f49459'
2024-10-26 00:34:37,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:37,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 589 (Remove Python 2 compatibility import) 33cf0eb27577cdf0651aa994cfd52add56f49459'
2024-10-26 00:34:37,743 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-10-26 00:34:37,746 [ scc.git] DEBUG omeroweb/urls.py | 4 ++--
2024-10-26 00:34:37,746 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2024-10-26 00:34:38,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:38,043 [ scc.git] DEBUG Calling 'git submodule update'
2024-10-26 00:34:38,081 [ scc.git] DEBUG Get sha1 of %s
2024-10-26 00:34:38,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-10-26 00:34:38,086 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:34:38,122 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-26 00:34:38,132 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3d9c1b5fa0> has no local changes
2024-10-26 00:34:38,132 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 589 knabar 'Remove Python 2 compatibility import'
Generated by OMERO-python-superbuild-push#214 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/214/)'
2024-10-26 00:34:38,142 [ scc.git] DEBUG [detached HEAD fbb9e05d6] merge master -Dorg -Ssuccess-only
2024-10-26 00:34:38,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:34:38,142 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-10-26 00:34:38,189 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-10-26 00:34:38,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:38,440 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-10-26 00:34:38,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:38,821 [ scc.config] DEBUG Found submodule.omero-py.url
2024-10-26 00:34:39,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:39,209 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-10-26 00:34:39,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:39,590 [ scc.config] DEBUG Found submodule.omero-web.url
2024-10-26 00:34:39,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-10-26 00:34:39,984 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-10-26 00:34:40,010 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3d9e54b8b0> has local changes
2024-10-26 00:34:40,010 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 427 Rdornier 'Add fileset folder creation'
- PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
- PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
- PR 589 knabar 'Remove Python 2 compatibility import'
Generated by OMERO-python-superbuild-push#214 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/214/)'
2024-10-26 00:34:40,019 [ scc.git] DEBUG [detached HEAD e25c12f] merge master -Dorg -Ssuccess-only
2024-10-26 00:34:40,019 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-10-26 00:34:40,020 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-10-26 00:34:40,020 [ scc.merge] INFO Already up to date.
2024-10-26 00:34:40,020 [ scc.merge] INFO
2024-10-26 00:34:40,020 [ scc.merge] INFO Merged PRs:
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-10-26 00:34:40,020 [ scc.merge] INFO
2024-10-26 00:34:40,020 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-10-26 00:34:40,020 [ scc.merge] INFO Already up to date.
2024-10-26 00:34:40,020 [ scc.merge] INFO
2024-10-26 00:34:40,020 [ scc.merge] INFO Merged PRs:
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-10-26 00:34:40,020 [ scc.merge] INFO
2024-10-26 00:34:40,020 [ scc.merge] INFO Repository: ome/omero-marshal
2024-10-26 00:34:40,020 [ scc.merge] INFO Excluded PRs:
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-10-26 00:34:40,020 [ scc.merge] INFO Already up to date.
2024-10-26 00:34:40,020 [ scc.merge] INFO
2024-10-26 00:34:40,020 [ scc.merge] INFO Merged PRs:
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-10-26 00:34:40,020 [ scc.merge] INFO
2024-10-26 00:34:40,020 [ scc.merge] INFO Repository: ome/omero-py
2024-10-26 00:34:40,020 [ scc.merge] INFO Excluded PRs:
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-10-26 00:34:40,020 [ scc.merge] INFO Already up to date.
2024-10-26 00:34:40,020 [ scc.merge] INFO
2024-10-26 00:34:40,020 [ scc.merge] INFO Merged PRs:
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-10-26 00:34:40,020 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-10-26 00:34:40,021 [ scc.merge] INFO
2024-10-26 00:34:40,021 [ scc.merge] INFO Repository: ome/omero-scripts
2024-10-26 00:34:40,021 [ scc.merge] INFO Excluded PRs:
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-10-26 00:34:40,021 [ scc.merge] INFO Already up to date.
2024-10-26 00:34:40,021 [ scc.merge] INFO
2024-10-26 00:34:40,021 [ scc.merge] INFO Merged PRs:
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-10-26 00:34:40,021 [ scc.merge] INFO
2024-10-26 00:34:40,021 [ scc.merge] INFO Conflicting PRs (not included):
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-10-26 00:34:40,021 [ scc.merge] INFO
2024-10-26 00:34:40,021 [ scc.merge] INFO Repository: ome/omero-web
2024-10-26 00:34:40,021 [ scc.merge] INFO Excluded PRs:
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-10-26 00:34:40,021 [ scc.merge] INFO Already up to date.
2024-10-26 00:34:40,021 [ scc.merge] INFO
2024-10-26 00:34:40,021 [ scc.merge] INFO Merged PRs:
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 580 sbesson 'omeroweb.webgateway.obj_id_bitmask: handle empty query results'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to show data from all users in that group'
2024-10-26 00:34:40,021 [ scc.merge] INFO - PR 589 knabar 'Remove Python 2 compatibility import'
2024-10-26 00:34:40,021 [ scc.merge] INFO
2024-10-26 00:34:40,022 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-10-26 00:34:40,022 [ scc.git] DEBUG Calling 'git remote'
2024-10-26 00:34:40,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-10-26 00:34:40,025 [ scc.git] DEBUG Calling 'git remote'
2024-10-26 00:34:40,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:34:40,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-10-26 00:34:40,029 [ scc.git] DEBUG Calling 'git remote'
2024-10-26 00:34:40,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:34:40,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-10-26 00:34:40,034 [ scc.git] DEBUG Calling 'git remote'
2024-10-26 00:34:40,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:34:40,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-10-26 00:34:40,039 [ scc.git] DEBUG Calling 'git remote'
2024-10-26 00:34:40,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-10-26 00:34:40,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-10-26 00:34:40,043 [ scc.git] DEBUG Calling 'git remote'
2024-10-26 00:34:40,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from da5b7d11f
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-10-26 00:35:07,075 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/03a0bb70/images/svgs/logo.svg){kind=logo}
