Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2025-08-27 00:48:14,122 [ scc.config] DEBUG Found github.token
2025-08-27 00:48:14,123 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:14,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:48:14,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:14,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:48:15,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:15,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-27 00:48:15,267 [ scc.gh] DEBUG 4659 remaining from 5000 (Reset at 01:08
2025-08-27 00:48:15,268 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-27 00:48:15,271 [ scc.git] DEBUG Check current status
2025-08-27 00:48:15,271 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-27 00:48:15,273 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235
2025-08-27 00:48:15,274 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-27 00:48:15,380 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-08-27 00:48:15,543 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-08-27 00:48:15,628 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a)
2025-08-27 00:48:15,632 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-08-27 00:48:15,637 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2025-08-27 00:48:15,640 [ scc.config] DEBUG Found remote.origin.url
2025-08-27 00:48:15,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:16,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-08-27 00:48:16,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:16,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-27 00:48:16,779 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:16,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-27 00:48:17,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:17,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-27 00:48:17,689 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:17,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-27 00:48:17,903 [ scc.git] DEBUG Resetting...
2025-08-27 00:48:17,903 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-27 00:48:17,908 [ scc.git] DEBUG HEAD is now at e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235
2025-08-27 00:48:17,908 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-27 00:48:17,965 [ scc.git] DEBUG Check current status
2025-08-27 00:48:17,965 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-27 00:48:17,967 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235
2025-08-27 00:48:17,967 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-27 00:48:18,008 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-08-27 00:48:18,012 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-08-27 00:48:18,017 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a)
2025-08-27 00:48:18,021 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-08-27 00:48:18,026 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2025-08-27 00:48:18,027 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-08-27 00:48:18,027 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-08-27 00:48:18,027 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-08-27 00:48:18,027 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-08-27 00:48:18,027 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-08-27 00:48:18,027 [ scc.repo] DEBUG ## PRs found:
2025-08-27 00:48:18,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:18,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2025-08-27 00:48:18,378 [ scc.repo] DEBUG ## Branches found:
2025-08-27 00:48:18,378 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:18,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:18,380 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-27 00:48:18,383 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-27 00:48:18,383 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-27 00:48:18,386 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-27 00:48:18,388 [ scc.git] DEBUG Already up to date.
2025-08-27 00:48:18,388 [ scc.git] DEBUG ## Unique users: []
2025-08-27 00:48:18,388 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:18,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:18,391 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-27 00:48:18,434 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:18,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:18,436 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-27 00:48:18,922 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fedbe819850> has no local changes
2025-08-27 00:48:18,922 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Generated by OMERO-python-superbuild-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/503/)'
2025-08-27 00:48:18,947 [ scc.git] DEBUG [detached HEAD 0803eb6] merge master -Dorg -Snone
2025-08-27 00:48:18,947 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-08-27 00:48:18,948 [ scc.merge] INFO Already up to date.
2025-08-27 00:48:18,948 [ scc.merge] INFO
2025-08-27 00:48:18,948 [ scc.merge] INFO
2025-08-27 00:48:18,948 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-27 00:48:18,948 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-08-27 00:48:20,958 [ scc.config] DEBUG Found github.token
2025-08-27 00:48:20,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:21,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:48:21,429 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:21,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:48:21,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:22,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2025-08-27 00:48:22,060 [ scc.gh] DEBUG 4651 remaining from 5000 (Reset at 01:08
2025-08-27 00:48:22,061 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-27 00:48:22,063 [ scc.git] DEBUG Check current status
2025-08-27 00:48:22,063 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-27 00:48:22,065 [ scc.git] DEBUG 0803eb6 merge master -Dorg -Snone
2025-08-27 00:48:22,066 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-27 00:48:22,110 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-08-27 00:48:22,113 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-08-27 00:48:22,118 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a)
2025-08-27 00:48:22,123 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-08-27 00:48:22,128 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2025-08-27 00:48:22,131 [ scc.config] DEBUG Found remote.origin.url
2025-08-27 00:48:22,131 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2025-08-27 00:48:22,132 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2025-08-27 00:48:22,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:22,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2025-08-27 00:48:22,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:23,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-27 00:48:23,377 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:23,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-27 00:48:23,837 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:24,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-27 00:48:24,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:24,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-27 00:48:24,502 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:48:24,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-08-27 00:48:24,553 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-27 00:48:24,556 [ scc.git] DEBUG Check current status
2025-08-27 00:48:24,556 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-27 00:48:24,558 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build
2025-08-27 00:48:24,559 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-27 00:48:24,600 [ scc.config] DEBUG Found remote.origin.url
2025-08-27 00:48:24,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:25,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2025-08-27 00:48:25,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:25,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-27 00:48:25,866 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:26,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-27 00:48:26,329 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:26,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-27 00:48:26,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:27,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-27 00:48:27,016 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:48:27,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:48:27,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-08-27 00:48:27,057 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-27 00:48:27,059 [ scc.git] DEBUG Check current status
2025-08-27 00:48:27,059 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-27 00:48:27,061 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build
2025-08-27 00:48:27,061 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-27 00:48:27,102 [ scc.config] DEBUG Found remote.origin.url
2025-08-27 00:48:27,268 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:27,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2025-08-27 00:48:27,797 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:28,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-27 00:48:28,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:28,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-27 00:48:28,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:29,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-27 00:48:29,258 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:29,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-27 00:48:29,456 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:48:29,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:48:29,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-08-27 00:48:29,497 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-27 00:48:29,499 [ scc.git] DEBUG Check current status
2025-08-27 00:48:29,499 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-27 00:48:29,501 [ scc.git] DEBUG 70b6235a Merge pull request #464 from dominikl/map_anno_wrapper
2025-08-27 00:48:29,502 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-27 00:48:29,543 [ scc.config] DEBUG Found remote.origin.url
2025-08-27 00:48:29,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:30,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2025-08-27 00:48:30,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:30,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-27 00:48:30,857 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:31,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-27 00:48:31,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:31,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-27 00:48:31,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:32,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-27 00:48:32,011 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:48:32,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:48:32,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-08-27 00:48:32,052 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-27 00:48:32,054 [ scc.git] DEBUG Check current status
2025-08-27 00:48:32,054 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-27 00:48:32,057 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-08-27 00:48:32,057 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-27 00:48:32,098 [ scc.config] DEBUG Found remote.origin.url
2025-08-27 00:48:32,098 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2025-08-27 00:48:32,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:32,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2025-08-27 00:48:32,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:33,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-27 00:48:33,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:33,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-27 00:48:33,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:34,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-27 00:48:34,313 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:34,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-27 00:48:34,513 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:48:34,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:48:34,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-08-27 00:48:34,554 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2025-08-27 00:48:34,556 [ scc.git] DEBUG Check current status
2025-08-27 00:48:34,556 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-27 00:48:34,559 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0
2025-08-27 00:48:34,559 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-27 00:48:34,601 [ scc.config] DEBUG Found remote.origin.url
2025-08-27 00:48:34,765 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:35,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2025-08-27 00:48:35,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:35,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2025-08-27 00:48:35,896 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:36,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2025-08-27 00:48:36,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:36,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2025-08-27 00:48:36,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:37,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2025-08-27 00:48:37,055 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:48:37,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:48:37,094 [ scc.git] DEBUG Resetting...
2025-08-27 00:48:37,094 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2025-08-27 00:48:37,099 [ scc.git] DEBUG HEAD is now at 0803eb6 merge master -Dorg -Snone
2025-08-27 00:48:37,099 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2025-08-27 00:48:37,152 [ scc.git] DEBUG Check current status
2025-08-27 00:48:37,152 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2025-08-27 00:48:37,154 [ scc.git] DEBUG 0803eb6 merge master -Dorg -Snone
2025-08-27 00:48:37,154 [ scc.git] DEBUG Calling 'git submodule status'
2025-08-27 00:48:37,194 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2025-08-27 00:48:37,198 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2025-08-27 00:48:37,203 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a)
2025-08-27 00:48:37,207 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34)
2025-08-27 00:48:37,212 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2025-08-27 00:48:37,212 [ scc.merge] INFO Merging Pull Request(s) based on master
2025-08-27 00:48:37,212 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2025-08-27 00:48:37,212 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2025-08-27 00:48:37,212 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2025-08-27 00:48:37,213 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2025-08-27 00:48:37,213 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2025-08-27 00:48:37,213 [ scc.repo] DEBUG ## PRs found:
2025-08-27 00:48:37,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:37,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2025-08-27 00:48:37,534 [ scc.repo] DEBUG ## Branches found:
2025-08-27 00:48:37,534 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:37,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:37,536 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-27 00:48:37,538 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-27 00:48:37,538 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-27 00:48:37,541 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-27 00:48:37,544 [ scc.git] DEBUG Already up to date.
2025-08-27 00:48:37,544 [ scc.git] DEBUG ## Unique users: []
2025-08-27 00:48:37,544 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:37,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:37,546 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-27 00:48:37,589 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:37,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:37,592 [ scc.repo] DEBUG ## PRs found:
2025-08-27 00:48:37,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:38,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2025-08-27 00:48:38,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:38,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2025-08-27 00:48:38,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:39,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2025-08-27 00:48:39,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:39,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-08-27 00:48:40,045 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:40,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:48:40,553 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:40,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2025-08-27 00:48:41,176 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:41,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2025-08-27 00:48:41,406 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-08-27 00:48:41,406 [ scc.repo] DEBUG ## Branches found:
2025-08-27 00:48:41,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-08-27 00:48:41,406 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:41,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:41,409 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-27 00:48:41,411 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-27 00:48:41,411 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-27 00:48:41,414 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-27 00:48:41,418 [ scc.git] DEBUG Already up to date.
2025-08-27 00:48:41,418 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2025-08-27 00:48:41,706 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2025-08-27 00:48:41,706 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2025-08-27 00:48:41,710 [ scc.git] DEBUG ## Unique users: []
2025-08-27 00:48:41,710 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:41,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:41,712 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-08-27 00:48:41,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:41,717 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2025-08-27 00:48:41,805 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2025-08-27 00:48:41,805 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2025-08-27 00:48:41,805 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2025-08-27 00:48:41,805 [ scc.git] DEBUG Auto-merging src/fsLists.py
2025-08-27 00:48:41,805 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2025-08-27 00:48:41,805 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2025-08-27 00:48:41,805 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2025-08-27 00:48:41,805 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2025-08-27 00:48:41,805 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2025-08-27 00:48:41,806 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:48:41,810 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2025-08-27 00:48:41,810 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2025-08-27 00:48:41,810 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2025-08-27 00:48:41,810 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2025-08-27 00:48:41,810 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2025-08-27 00:48:41,810 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2025-08-27 00:48:41,810 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2025-08-27 00:48:41,810 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2025-08-27 00:48:41,810 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2025-08-27 00:48:41,810 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2025-08-27 00:48:41,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:42,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:48:42,007 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-27 00:48:42,048 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:42,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:42,051 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:48:42,090 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-27 00:48:42,094 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7912fb85d0> has no local changes
2025-08-27 00:48:42,094 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/503/)'
2025-08-27 00:48:42,101 [ scc.git] DEBUG [detached HEAD 62f6603] merge master -Dorg -Ssuccess-only
2025-08-27 00:48:42,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:48:42,101 [ scc.repo] DEBUG ## PRs found:
2025-08-27 00:48:42,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:42,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2025-08-27 00:48:42,832 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:43,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2025-08-27 00:48:43,347 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:43,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2025-08-27 00:48:43,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:44,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2025-08-27 00:48:44,375 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:44,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2025-08-27 00:48:44,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:45,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-08-27 00:48:45,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:45,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:48:45,953 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:46,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2025-08-27 00:48:46,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:46,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2025-08-27 00:48:46,702 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2025-08-27 00:48:46,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:47,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2025-08-27 00:48:47,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:47,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2025-08-27 00:48:47,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:48,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2025-08-27 00:48:48,526 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:48,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2025-08-27 00:48:48,773 [ scc.repo] DEBUG ## Branches found:
2025-08-27 00:48:48,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-08-27 00:48:48,773 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:48,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:48,776 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-27 00:48:48,779 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-27 00:48:48,779 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-27 00:48:48,782 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-27 00:48:48,785 [ scc.git] DEBUG Already up to date.
2025-08-27 00:48:48,785 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2025-08-27 00:48:49,278 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2025-08-27 00:48:49,278 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2025-08-27 00:48:49,283 [ scc.git] DEBUG ## Unique users: []
2025-08-27 00:48:49,283 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:49,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:49,285 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-08-27 00:48:49,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:49,291 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2025-08-27 00:48:49,301 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2025-08-27 00:48:49,302 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:48:49,305 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2025-08-27 00:48:49,305 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2025-08-27 00:48:49,305 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2025-08-27 00:48:49,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:49,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:48:49,509 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-27 00:48:49,552 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:48:49,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:48:49,555 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:48:49,597 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-27 00:48:49,601 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f79120bc090> has no local changes
2025-08-27 00:48:49,602 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/503/)'
2025-08-27 00:48:49,609 [ scc.git] DEBUG [detached HEAD 689d420] merge master -Dorg -Ssuccess-only
2025-08-27 00:48:49,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:48:49,609 [ scc.repo] DEBUG ## PRs found:
2025-08-27 00:48:49,761 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-27 00:48:52,173 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-27 00:48:52,730 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-27 00:48:53,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-27 00:48:53,793 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-27 00:48:54,261 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:54,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None
2025-08-27 00:48:54,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:55,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/status HTTP/1.1" 200 None
2025-08-27 00:48:55,005 [ scc.repo] DEBUG - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3'
2025-08-27 00:48:55,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:55,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2025-08-27 00:48:55,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-27 00:48:56,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:56,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2025-08-27 00:48:56,807 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:57,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None
2025-08-27 00:48:57,348 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
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2025-08-27 00:48:57,874 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:58,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None
2025-08-27 00:48:58,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:58,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None
2025-08-27 00:48:58,689 [ scc.repo] DEBUG # ... Exclude label: exclude
2025-08-27 00:48:58,940 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:59,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2025-08-27 00:48:59,431 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:48:59,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2025-08-27 00:48:59,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:00,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-08-27 00:49:00,501 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:00,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:01,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:01,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2025-08-27 00:49:01,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:01,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2
2025-08-27 00:49:01,708 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2025-08-27 00:49:01,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:02,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2025-08-27 00:49:02,489 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:02,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2025-08-27 00:49:02,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:03,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2025-08-27 00:49:03,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:03,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:04,099 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:04,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-27 00:49:04,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:04,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2025-08-27 00:49:05,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:05,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2025-08-27 00:49:05,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:05,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-08-27 00:49:06,225 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:06,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:06,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:07,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2025-08-27 00:49:07,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:07,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2025-08-27 00:49:07,514 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2025-08-27 00:49:07,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:08,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2025-08-27 00:49:08,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:08,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2025-08-27 00:49:08,870 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:09,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-08-27 00:49:09,526 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:09,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:10,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:10,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2025-08-27 00:49:10,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:10,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2
2025-08-27 00:49:10,850 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2025-08-27 00:49:11,102 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:11,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2025-08-27 00:49:11,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:11,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2025-08-27 00:49:12,184 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:12,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2025-08-27 00:49:12,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:12,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2025-08-27 00:49:13,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:13,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-08-27 00:49:13,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:14,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:14,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:14,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2025-08-27 00:49:14,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:14,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2025-08-27 00:49:14,972 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2025-08-27 00:49:14,972 [ scc.repo] DEBUG ## Branches found:
2025-08-27 00:49:14,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-08-27 00:49:14,973 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:49:14,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:14,975 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-27 00:49:14,978 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-27 00:49:14,978 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-27 00:49:14,981 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-27 00:49:14,984 [ scc.git] DEBUG Already up to date.
2025-08-27 00:49:14,984 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2025-08-27 00:49:19,066 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-08-27 00:49:19,066 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2025-08-27 00:49:19,071 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2025-08-27 00:49:19,409 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-08-27 00:49:19,410 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2025-08-27 00:49:19,414 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2025-08-27 00:49:19,705 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-08-27 00:49:19,705 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2025-08-27 00:49:19,710 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2025-08-27 00:49:20,318 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-08-27 00:49:20,319 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2025-08-27 00:49:20,323 [ scc.git] DEBUG Calling 'git fetch origin pull/472/head'
2025-08-27 00:49:20,705 [ scc.git] DEBUG From https://github.com/ome/omero-py
2025-08-27 00:49:20,705 [ scc.git] DEBUG * branch refs/pull/472/head -> FETCH_HEAD
2025-08-27 00:49:20,709 [ scc.git] DEBUG ## Unique users: []
2025-08-27 00:49:20,709 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:49:20,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:20,712 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-08-27 00:49:20,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:20,728 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2025-08-27 00:49:20,873 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2025-08-27 00:49:20,873 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2025-08-27 00:49:20,875 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:49:20,879 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2025-08-27 00:49:20,879 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2025-08-27 00:49:20,879 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2025-08-27 00:49:20,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:21,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:49:21,085 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-08-27 00:49:21,098 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:21,100 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2025-08-27 00:49:21,213 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:49:21,217 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2025-08-27 00:49:21,217 [ scc.git] DEBUG connect.py | 11 +++++++++++
2025-08-27 00:49:21,217 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2025-08-27 00:49:21,217 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2025-08-27 00:49:21,217 [ scc.git] DEBUG create mode 100644 connect.py
2025-08-27 00:49:21,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:21,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:49:21,544 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2025-08-27 00:49:21,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:21,559 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2025-08-27 00:49:21,651 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2025-08-27 00:49:21,652 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:49:21,656 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2025-08-27 00:49:21,656 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2025-08-27 00:49:21,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:21,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:49:21,990 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-08-27 00:49:22,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:22,005 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2025-08-27 00:49:22,238 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2025-08-27 00:49:22,239 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:49:22,246 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2025-08-27 00:49:22,246 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2025-08-27 00:49:22,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:22,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:49:22,458 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fbcef67768f4e37313bc42a18b5fb078964fcf64'
2025-08-27 00:49:22,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:22,474 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 472 (Remove PyOpenSSL injection via urllib3) fbcef67768f4e37313bc42a18b5fb078964fcf64'
2025-08-27 00:49:22,498 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:49:22,501 [ scc.git] DEBUG setup.py | 1 -
2025-08-27 00:49:22,502 [ scc.git] DEBUG src/omero/util/upgrade_check.py | 7 -------
2025-08-27 00:49:22,502 [ scc.git] DEBUG 2 files changed, 8 deletions(-)
2025-08-27 00:49:22,710 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:22,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:49:22,923 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-27 00:49:22,964 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:49:22,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:22,966 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:49:23,006 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-27 00:49:23,012 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7911d95650> has no local changes
2025-08-27 00:49:23,013 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 472 sbesson 'Remove PyOpenSSL injection via urllib3'
Generated by OMERO-python-superbuild-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/503/)'
2025-08-27 00:49:23,020 [ scc.git] DEBUG [detached HEAD d4f9b83f] merge master -Dorg -Ssuccess-only
2025-08-27 00:49:23,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:49:23,020 [ scc.git] INFO Overriding base-branch from master to develop
2025-08-27 00:49:23,020 [ scc.repo] DEBUG ## PRs found:
2025-08-27 00:49:23,175 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:23,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-08-27 00:49:23,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:24,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-08-27 00:49:24,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:24,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-08-27 00:49:24,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:25,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-27 00:49:25,395 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:25,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:25,926 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:26,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-27 00:49:26,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:26,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-27 00:49:26,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:27,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-08-27 00:49:27,196 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-27 00:49:27,448 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:27,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-08-27 00:49:27,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:28,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-08-27 00:49:28,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:28,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-27 00:49:29,088 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:29,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:29,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:29,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-27 00:49:30,156 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:30,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-08-27 00:49:30,380 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-27 00:49:30,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:30,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-08-27 00:49:31,198 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:31,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-08-27 00:49:31,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:31,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-08-27 00:49:32,238 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:32,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-08-27 00:49:32,489 [ scc.repo] DEBUG ## Branches found:
2025-08-27 00:49:32,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-08-27 00:49:32,489 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:49:32,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:32,492 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-08-27 00:49:32,495 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-27 00:49:32,495 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-08-27 00:49:32,498 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-08-27 00:49:32,501 [ scc.git] DEBUG Already up to date.
2025-08-27 00:49:32,501 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-08-27 00:49:33,151 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-08-27 00:49:33,151 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-08-27 00:49:33,155 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-08-27 00:49:33,908 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2025-08-27 00:49:33,908 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-08-27 00:49:33,912 [ scc.git] DEBUG ## Unique users: []
2025-08-27 00:49:33,912 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:49:33,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:33,915 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-27 00:49:33,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:33,923 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-27 00:49:34,033 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-08-27 00:49:34,034 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-27 00:49:34,034 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-27 00:49:34,037 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150'
2025-08-27 00:49:34,041 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-08-27 00:49:34,043 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:34,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:49:34,249 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-27 00:49:34,254 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150'
2025-08-27 00:49:34,258 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#503](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/503/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/503/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-08-27 00:49:34,260 [ scc.config] DEBUG Found github.token
2025-08-27 00:49:34,260 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-08-27 00:49:34,261 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-27 00:49:34,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:34,268 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-27 00:49:34,278 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:49:34,281 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-08-27 00:49:34,281 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-08-27 00:49:34,500 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:34,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:49:34,699 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-27 00:49:34,741 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:49:34,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:49:34,743 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:49:34,783 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-27 00:49:34,787 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7911d7fcd0> has no local changes
2025-08-27 00:49:34,787 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/503/)'
2025-08-27 00:49:34,794 [ scc.git] DEBUG [detached HEAD 2d17e52] merge master -Dorg -Ssuccess-only
2025-08-27 00:49:34,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:49:34,794 [ scc.repo] DEBUG ## PRs found:
2025-08-27 00:49:34,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:35,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2025-08-27 00:49:35,685 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:35,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None
2025-08-27 00:49:36,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:36,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None
2025-08-27 00:49:36,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:37,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None
2025-08-27 00:49:37,291 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:37,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:37,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:38,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-27 00:49:38,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:38,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None
2025-08-27 00:49:38,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:39,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:39,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:39,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None
2025-08-27 00:49:40,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:40,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None
2025-08-27 00:49:40,282 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4'
2025-08-27 00:49:40,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:40,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None
2025-08-27 00:49:41,064 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:41,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-08-27 00:49:41,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:42,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:42,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:42,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-27 00:49:42,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:43,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-08-27 00:49:43,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:43,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:43,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:44,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None
2025-08-27 00:49:44,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:44,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None
2025-08-27 00:49:44,570 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-08-27 00:49:44,821 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:45,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None
2025-08-27 00:49:45,335 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:45,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None
2025-08-27 00:49:45,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:46,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-08-27 00:49:46,434 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:46,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:46,953 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:47,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-27 00:49:47,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:47,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-08-27 00:49:48,054 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:48,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:48,541 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:48,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None
2025-08-27 00:49:49,009 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:49,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None
2025-08-27 00:49:49,215 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display'
2025-08-27 00:49:49,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:49,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None
2025-08-27 00:49:49,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:50,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None
2025-08-27 00:49:50,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:50,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-08-27 00:49:51,029 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:51,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:51,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:51,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-27 00:49:52,106 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:52,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-08-27 00:49:52,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:52,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:53,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:53,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None
2025-08-27 00:49:53,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:53,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None
2025-08-27 00:49:53,896 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-08-27 00:49:54,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:54,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2025-08-27 00:49:54,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:54,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2025-08-27 00:49:55,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:55,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-08-27 00:49:55,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:55,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:56,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:56,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-27 00:49:56,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:57,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-08-27 00:49:57,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:57,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2025-08-27 00:49:57,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:58,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None
2025-08-27 00:49:58,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:58,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2025-08-27 00:49:58,593 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2025-08-27 00:49:58,844 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:59,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2025-08-27 00:49:59,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:49:59,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-08-27 00:49:59,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:00,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:50:00,501 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:00,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-27 00:50:01,032 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:01,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-08-27 00:50:01,636 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:01,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None
2025-08-27 00:50:02,140 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:02,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None
2025-08-27 00:50:02,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:02,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None
2025-08-27 00:50:02,856 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2025-08-27 00:50:03,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:03,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None
2025-08-27 00:50:03,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:03,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None
2025-08-27 00:50:04,146 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:04,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-08-27 00:50:04,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:05,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:50:05,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:05,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-27 00:50:05,895 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:06,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-08-27 00:50:06,428 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:06,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None
2025-08-27 00:50:06,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:07,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2025-08-27 00:50:07,429 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:07,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None
2025-08-27 00:50:07,649 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag'
2025-08-27 00:50:07,901 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:08,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None
2025-08-27 00:50:08,455 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:08,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None
2025-08-27 00:50:08,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:09,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-08-27 00:50:09,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:09,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:50:10,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:10,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-27 00:50:10,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:10,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-08-27 00:50:11,211 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:11,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None
2025-08-27 00:50:11,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:12,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2025-08-27 00:50:12,255 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:12,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None
2025-08-27 00:50:12,542 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-08-27 00:50:12,794 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:13,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2025-08-27 00:50:13,342 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:13,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2025-08-27 00:50:13,842 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:14,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2025-08-27 00:50:14,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:14,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2025-08-27 00:50:14,874 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:15,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-08-27 00:50:15,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:15,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:50:15,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:16,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2025-08-27 00:50:16,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:16,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2
2025-08-27 00:50:16,588 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-08-27 00:50:16,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:17,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2025-08-27 00:50:17,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:17,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2025-08-27 00:50:17,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:18,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-08-27 00:50:18,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:18,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:50:18,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:19,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2025-08-27 00:50:19,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:19,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2
2025-08-27 00:50:19,745 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2025-08-27 00:50:19,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:20,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2025-08-27 00:50:20,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:21,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2025-08-27 00:50:21,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:21,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2025-08-27 00:50:21,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:22,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-27 00:50:22,307 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:22,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2025-08-27 00:50:22,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:23,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2
2025-08-27 00:50:23,129 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler'
2025-08-27 00:50:23,129 [ scc.repo] DEBUG ## Branches found:
2025-08-27 00:50:23,129 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-08-27 00:50:23,130 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:50:23,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:23,132 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-27 00:50:23,135 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-27 00:50:23,135 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-27 00:50:23,186 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-27 00:50:23,189 [ scc.git] DEBUG Already up to date.
2025-08-27 00:50:23,189 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head'
2025-08-27 00:50:26,593 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-27 00:50:26,593 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD
2025-08-27 00:50:26,598 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2025-08-27 00:50:27,235 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-27 00:50:27,235 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2025-08-27 00:50:27,239 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2025-08-27 00:50:27,633 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-27 00:50:27,633 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2025-08-27 00:50:27,637 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head'
2025-08-27 00:50:28,681 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-27 00:50:28,681 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD
2025-08-27 00:50:28,686 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head'
2025-08-27 00:50:29,199 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-27 00:50:29,199 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD
2025-08-27 00:50:29,204 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2025-08-27 00:50:29,493 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-27 00:50:29,493 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2025-08-27 00:50:29,498 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2025-08-27 00:50:30,181 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-27 00:50:30,181 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2025-08-27 00:50:30,185 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head'
2025-08-27 00:50:30,705 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-27 00:50:30,705 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD
2025-08-27 00:50:30,710 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head'
2025-08-27 00:50:31,795 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-27 00:50:31,795 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD
2025-08-27 00:50:31,800 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head'
2025-08-27 00:50:32,123 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-27 00:50:32,123 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD
2025-08-27 00:50:32,128 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head'
2025-08-27 00:50:32,649 [ scc.git] DEBUG From https://github.com/ome/omero-web
2025-08-27 00:50:32,649 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD
2025-08-27 00:50:32,654 [ scc.git] DEBUG ## Unique users: []
2025-08-27 00:50:32,654 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:50:32,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:32,656 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200'
2025-08-27 00:50:32,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:32,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200'
2025-08-27 00:50:32,797 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:50:32,802 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +-
2025-08-27 00:50:32,802 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++-
2025-08-27 00:50:32,802 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +-
2025-08-27 00:50:32,802 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +-
2025-08-27 00:50:32,802 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +-
2025-08-27 00:50:32,802 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++-
2025-08-27 00:50:32,802 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++-
2025-08-27 00:50:32,802 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +-
2025-08-27 00:50:32,802 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +-
2025-08-27 00:50:32,802 [ scc.git] DEBUG test/unit/test_web.py | 1 +
2025-08-27 00:50:32,803 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-)
2025-08-27 00:50:32,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:33,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:33,003 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-08-27 00:50:33,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:33,015 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2025-08-27 00:50:33,096 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-08-27 00:50:33,096 [ scc.git] DEBUG Auto-merging setup.py
2025-08-27 00:50:33,097 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:50:33,101 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2025-08-27 00:50:33,101 [ scc.git] DEBUG setup.py | 1 +
2025-08-27 00:50:33,101 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2025-08-27 00:50:33,255 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:33,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:33,441 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-08-27 00:50:33,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:33,452 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2025-08-27 00:50:33,606 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2025-08-27 00:50:33,606 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2025-08-27 00:50:33,608 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:50:33,612 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2025-08-27 00:50:33,612 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2025-08-27 00:50:33,612 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2025-08-27 00:50:33,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:33,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:33,914 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-08-27 00:50:33,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:33,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb'
2025-08-27 00:50:34,004 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:50:34,008 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2025-08-27 00:50:34,008 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-27 00:50:34,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:34,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:34,379 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-08-27 00:50:34,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:34,391 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8'
2025-08-27 00:50:34,484 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:50:34,488 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++--
2025-08-27 00:50:34,488 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2025-08-27 00:50:34,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:34,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:34,876 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2025-08-27 00:50:34,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:34,888 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2025-08-27 00:50:35,053 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:50:35,059 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2025-08-27 00:50:35,059 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2025-08-27 00:50:35,059 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2025-08-27 00:50:35,059 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2025-08-27 00:50:35,059 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2025-08-27 00:50:35,059 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2025-08-27 00:50:35,059 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2025-08-27 00:50:35,059 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2025-08-27 00:50:35,059 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2025-08-27 00:50:35,059 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2025-08-27 00:50:35,059 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2025-08-27 00:50:35,059 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2025-08-27 00:50:35,128 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:35,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:35,339 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-08-27 00:50:35,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:35,351 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2025-08-27 00:50:35,896 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2025-08-27 00:50:35,898 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:50:35,904 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2025-08-27 00:50:35,904 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2025-08-27 00:50:35,904 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2025-08-27 00:50:35,905 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2025-08-27 00:50:35,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:36,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:36,098 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-08-27 00:50:36,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:36,110 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26'
2025-08-27 00:50:36,216 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:50:36,220 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++
2025-08-27 00:50:36,220 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++----------
2025-08-27 00:50:36,220 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-)
2025-08-27 00:50:36,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:36,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:36,550 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-08-27 00:50:36,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:36,563 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342'
2025-08-27 00:50:36,585 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:50:36,589 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++--
2025-08-27 00:50:36,589 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++-------
2025-08-27 00:50:36,589 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++
2025-08-27 00:50:36,589 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-)
2025-08-27 00:50:36,802 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:37,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:37,011 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-08-27 00:50:37,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:37,023 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac'
2025-08-27 00:50:37,157 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-08-27 00:50:37,158 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:50:37,162 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++-----
2025-08-27 00:50:37,162 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-)
2025-08-27 00:50:37,264 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:37,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:37,464 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60'
2025-08-27 00:50:37,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:37,476 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60'
2025-08-27 00:50:37,518 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2025-08-27 00:50:37,519 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-27 00:50:37,523 [ scc.git] DEBUG omeroweb/settings.py | 4 ++--
2025-08-27 00:50:37,523 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-)
2025-08-27 00:50:37,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:37,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:37,946 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-27 00:50:37,988 [ scc.git] DEBUG Get sha1 of %s
2025-08-27 00:50:37,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-27 00:50:37,991 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:50:38,030 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-27 00:50:38,038 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7911e52450> has no local changes
2025-08-27 00:50:38,038 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
Already up to date.
Merged PRs:
- PR 168 stick 'Changes to nginx @maintenance handler'
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 628 jburel 'Add protocol required since Django4'
Generated by OMERO-python-superbuild-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/503/)'
2025-08-27 00:50:38,047 [ scc.git] DEBUG [detached HEAD 10bbb4b82] merge master -Dorg -Ssuccess-only
2025-08-27 00:50:38,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:50:38,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-27 00:50:38,097 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2025-08-27 00:50:38,198 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:38,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:38,407 [ scc.config] DEBUG Found submodule.omero-marshal.url
2025-08-27 00:50:38,652 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:38,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:38,864 [ scc.config] DEBUG Found submodule.omero-py.url
2025-08-27 00:50:39,110 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:39,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:39,304 [ scc.config] DEBUG Found submodule.omero-scripts.url
2025-08-27 00:50:39,550 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:39,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:39,734 [ scc.config] DEBUG Found submodule.omero-web.url
2025-08-27 00:50:39,980 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-27 00:50:40,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-27 00:50:40,196 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-27 00:50:40,224 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7911f050d0> has local changes
2025-08-27 00:50:40,224 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
- PR 450 multimeric 'Add model stubs' (user: multimeric)
- PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 332 jburel 'Build conda'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
- PR 472 sbesson 'Remove PyOpenSSL injection via urllib3'
Repository: ome/omero-scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 535 will-moore 'Initial working browser history' (stage: draft)
Already up to date.
Merged PRs:
- PR 168 stick 'Changes to nginx @maintenance handler'
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 595 sukunis 'linkify supports urls that include {}[] characters'
- PR 596 sukunis 'Linkify can parse anchor tag'
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 613 will-moore 'externalInfo display'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 628 jburel 'Add protocol required since Django4'
Generated by OMERO-python-superbuild-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/503/)'
2025-08-27 00:50:40,233 [ scc.git] DEBUG [detached HEAD 461ad37] merge master -Dorg -Ssuccess-only
2025-08-27 00:50:40,233 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2025-08-27 00:50:40,233 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2025-08-27 00:50:40,233 [ scc.merge] INFO Already up to date.
2025-08-27 00:50:40,233 [ scc.merge] INFO
2025-08-27 00:50:40,233 [ scc.merge] INFO
2025-08-27 00:50:40,233 [ scc.merge] INFO Repository: ome/omero-dropbox
2025-08-27 00:50:40,233 [ scc.merge] INFO Already up to date.
2025-08-27 00:50:40,233 [ scc.merge] INFO
2025-08-27 00:50:40,233 [ scc.merge] INFO Merged PRs:
2025-08-27 00:50:40,233 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2025-08-27 00:50:40,233 [ scc.merge] INFO
2025-08-27 00:50:40,233 [ scc.merge] INFO Repository: ome/omero-marshal
2025-08-27 00:50:40,233 [ scc.merge] INFO Excluded PRs:
2025-08-27 00:50:40,233 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2025-08-27 00:50:40,233 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2025-08-27 00:50:40,233 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2025-08-27 00:50:40,233 [ scc.merge] INFO Already up to date.
2025-08-27 00:50:40,233 [ scc.merge] INFO
2025-08-27 00:50:40,233 [ scc.merge] INFO Merged PRs:
2025-08-27 00:50:40,233 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2025-08-27 00:50:40,234 [ scc.merge] INFO
2025-08-27 00:50:40,234 [ scc.merge] INFO Repository: ome/omero-py
2025-08-27 00:50:40,234 [ scc.merge] INFO Excluded PRs:
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric)
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude)
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment)
2025-08-27 00:50:40,234 [ scc.merge] INFO Already up to date.
2025-08-27 00:50:40,234 [ scc.merge] INFO
2025-08-27 00:50:40,234 [ scc.merge] INFO Merged PRs:
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3'
2025-08-27 00:50:40,234 [ scc.merge] INFO
2025-08-27 00:50:40,234 [ scc.merge] INFO Repository: ome/omero-scripts
2025-08-27 00:50:40,234 [ scc.merge] INFO Excluded PRs:
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-08-27 00:50:40,234 [ scc.merge] INFO Already up to date.
2025-08-27 00:50:40,234 [ scc.merge] INFO
2025-08-27 00:50:40,234 [ scc.merge] INFO Merged PRs:
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-27 00:50:40,234 [ scc.merge] INFO
2025-08-27 00:50:40,234 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-27 00:50:40,234 [ scc.merge] INFO
2025-08-27 00:50:40,234 [ scc.merge] INFO Repository: ome/omero-web
2025-08-27 00:50:40,234 [ scc.merge] INFO Excluded PRs:
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2025-08-27 00:50:40,234 [ scc.merge] INFO Already up to date.
2025-08-27 00:50:40,234 [ scc.merge] INFO
2025-08-27 00:50:40,234 [ scc.merge] INFO Merged PRs:
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler'
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2025-08-27 00:50:40,234 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2025-08-27 00:50:40,235 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2025-08-27 00:50:40,235 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag'
2025-08-27 00:50:40,235 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2025-08-27 00:50:40,235 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2025-08-27 00:50:40,235 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2025-08-27 00:50:40,235 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2025-08-27 00:50:40,235 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2025-08-27 00:50:40,235 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2025-08-27 00:50:40,235 [ scc.merge] INFO
2025-08-27 00:50:40,235 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-27 00:50:40,235 [ scc.git] DEBUG Calling 'git remote'
2025-08-27 00:50:40,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2025-08-27 00:50:40,237 [ scc.git] DEBUG Calling 'git remote'
2025-08-27 00:50:40,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:50:40,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2025-08-27 00:50:40,239 [ scc.git] DEBUG Calling 'git remote'
2025-08-27 00:50:40,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:50:40,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2025-08-27 00:50:40,242 [ scc.git] DEBUG Calling 'git remote'
2025-08-27 00:50:40,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:50:40,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2025-08-27 00:50:40,244 [ scc.git] DEBUG Calling 'git remote'
2025-08-27 00:50:40,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2025-08-27 00:50:40,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2025-08-27 00:50:40,246 [ scc.git] DEBUG Calling 'git remote'
2025-08-27 00:50:40,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from 01fa0c5
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from 6d44f66
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 70b6235a
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 573db34
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 2a7c4d2e3
nothing to commit, working tree clean
HEAD detached from e505e49
nothing to commit, working tree clean
2025-08-27 00:51:10,979 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
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