![[Jenkins]](/jenkins/static/d0200910/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 75 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision ee4b0bab28a953efe211ded8eba1cfe37719eb11 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f ee4b0bab28a953efe211ded8eba1cfe37719eb11 # timeout=10 Commit message: "Merge pull request #278 from ome/dependabot/submodules/omero-py-53a327b" > git rev-list --no-walk ee4b0bab28a953efe211ded8eba1cfe37719eb11 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 67 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl (3.8 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.7 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-05-18 00:34:14,878 [ scc.config] DEBUG Found github.token 2024-05-18 00:34:14,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-18 00:34:15,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:34:15,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:34:15,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-18 00:34:15,918 [ scc.gh] DEBUG 3023 remaining from 5000 (Reset at 00:05 2024-05-18 00:34:15,919 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:34:15,924 [ scc.git] DEBUG Check current status 2024-05-18 00:34:15,924 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:34:15,928 [ scc.git] DEBUG ee4b0ba Merge pull request #278 from ome/dependabot/submodules/omero-py-53a327b 2024-05-18 00:34:15,928 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:34:15,991 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-05-18 00:34:15,994 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-05-18 00:34:16,032 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8) 2024-05-18 00:34:16,036 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-05-18 00:34:16,167 [ scc.git] DEBUG e1b1355ebd4f9de8b855dd2c55f59d86c061a81b omero-web (v5.25.0-9-ge1b1355eb) 2024-05-18 00:34:16,174 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:34:16,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-05-18 00:34:16,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:34:17,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:34:17,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:34:18,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:34:18,104 [ scc.git] DEBUG Resetting... 2024-05-18 00:34:18,104 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-18 00:34:18,110 [ scc.git] DEBUG HEAD is now at ee4b0ba Merge pull request #278 from ome/dependabot/submodules/omero-py-53a327b 2024-05-18 00:34:18,111 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-18 00:34:18,167 [ scc.git] DEBUG Check current status 2024-05-18 00:34:18,167 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:34:18,172 [ scc.git] DEBUG ee4b0ba Merge pull request #278 from ome/dependabot/submodules/omero-py-53a327b 2024-05-18 00:34:18,172 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:34:18,215 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-05-18 00:34:18,218 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-05-18 00:34:18,222 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8) 2024-05-18 00:34:18,226 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-05-18 00:34:18,229 [ scc.git] DEBUG e1b1355ebd4f9de8b855dd2c55f59d86c061a81b omero-web (v5.25.0-9-ge1b1355eb) 2024-05-18 00:34:18,230 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-18 00:34:18,230 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-18 00:34:18,230 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-18 00:34:18,230 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-18 00:34:18,230 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-18 00:34:18,231 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:34:18,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-05-18 00:34:18,533 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:34:18,533 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:18,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:18,537 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:34:18,541 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:34:18,541 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:34:18,545 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:34:18,550 [ scc.git] DEBUG Already up to date. 2024-05-18 00:34:18,550 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:34:18,550 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:18,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:18,554 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:34:18,594 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:18,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:18,599 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:34:18,813 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa04a768460> has no local changes 2024-05-18 00:34:18,814 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#65 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/65/)' 2024-05-18 00:34:18,842 [ scc.git] DEBUG [detached HEAD c6c9c3d] merge master -Dorg -Snone 2024-05-18 00:34:18,842 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-05-18 00:34:18,842 [ scc.merge] INFO Already up to date. 2024-05-18 00:34:18,842 [ scc.merge] INFO 2024-05-18 00:34:18,842 [ scc.merge] INFO 2024-05-18 00:34:18,842 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-18 00:34:18,842 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' From https://github.com/ome/omero-web e1b1355eb..c6314d8a9 master -> origin/master Submodule path 'omero-web': checked out 'c6314d8a9917ba4112696d683516d89be8fafcb0' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-05-18 00:34:23,275 [ scc.config] DEBUG Found github.token 2024-05-18 00:34:23,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-18 00:34:23,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:34:23,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:34:24,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-18 00:34:24,326 [ scc.gh] DEBUG 2996 remaining from 5000 (Reset at 00:05 2024-05-18 00:34:24,327 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:34:24,332 [ scc.git] DEBUG Check current status 2024-05-18 00:34:24,332 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:34:24,335 [ scc.git] DEBUG c6c9c3d merge master -Dorg -Snone 2024-05-18 00:34:24,336 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:34:24,375 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-05-18 00:34:24,379 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-05-18 00:34:24,382 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8) 2024-05-18 00:34:24,386 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-05-18 00:34:24,390 [ scc.git] DEBUG +c6314d8a9917ba4112696d683516d89be8fafcb0 omero-web (v5.25.0-43-gc6314d8a9) 2024-05-18 00:34:24,395 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:34:24,395 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-05-18 00:34:24,397 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-05-18 00:34:24,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-05-18 00:34:25,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:34:25,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:34:26,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:34:26,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:34:26,513 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:34:26,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-05-18 00:34:26,565 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:34:26,569 [ scc.git] DEBUG Check current status 2024-05-18 00:34:26,570 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:34:26,574 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0 2024-05-18 00:34:26,574 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:34:26,618 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:34:27,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-05-18 00:34:27,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:34:27,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:34:28,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:34:28,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:34:28,775 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:34:28,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:34:28,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-05-18 00:34:28,817 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:34:28,821 [ scc.git] DEBUG Check current status 2024-05-18 00:34:28,821 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:34:28,825 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-05-18 00:34:28,825 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:34:28,869 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:34:29,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-05-18 00:34:29,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:34:30,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:34:30,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:34:30,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:34:30,955 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:34:30,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:34:30,999 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-05-18 00:34:30,999 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:34:31,003 [ scc.git] DEBUG Check current status 2024-05-18 00:34:31,003 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:34:31,025 [ scc.git] DEBUG 53a327b8 Merge pull request #407 from jburel/install_conda_forge 2024-05-18 00:34:31,025 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:34:31,073 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:34:31,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-05-18 00:34:31,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:34:32,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:34:32,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:34:33,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:34:33,134 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:34:33,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:34:33,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-05-18 00:34:33,182 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:34:33,187 [ scc.git] DEBUG Check current status 2024-05-18 00:34:33,187 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:34:33,191 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-18 00:34:33,191 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:34:33,233 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:34:33,234 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-05-18 00:34:33,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-05-18 00:34:34,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:34:34,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:34:34,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:34:35,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:34:35,323 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:34:35,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:34:35,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-05-18 00:34:35,369 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:34:35,374 [ scc.git] DEBUG Check current status 2024-05-18 00:34:35,374 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:34:35,394 [ scc.git] DEBUG c6314d8a9 Merge pull request #553 from ome/pre-commit-ci-update-config 2024-05-18 00:34:35,394 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:34:35,436 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:34:35,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-05-18 00:34:36,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:34:36,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:34:37,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:34:37,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:34:37,523 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:34:37,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:34:37,565 [ scc.git] DEBUG Resetting... 2024-05-18 00:34:37,565 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-18 00:34:37,572 [ scc.git] DEBUG HEAD is now at c6c9c3d merge master -Dorg -Snone 2024-05-18 00:34:37,572 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-18 00:34:37,650 [ scc.git] DEBUG Submodule path 'omero-web': checked out 'e1b1355ebd4f9de8b855dd2c55f59d86c061a81b' 2024-05-18 00:34:37,654 [ scc.git] DEBUG Check current status 2024-05-18 00:34:37,654 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:34:37,659 [ scc.git] DEBUG c6c9c3d merge master -Dorg -Snone 2024-05-18 00:34:37,659 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:34:37,703 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-05-18 00:34:37,706 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-05-18 00:34:37,710 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8) 2024-05-18 00:34:37,714 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893) 2024-05-18 00:34:37,718 [ scc.git] DEBUG e1b1355ebd4f9de8b855dd2c55f59d86c061a81b omero-web (v5.25.0-9-ge1b1355eb) 2024-05-18 00:34:37,719 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-18 00:34:37,719 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-18 00:34:37,719 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-18 00:34:37,719 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-18 00:34:37,719 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-18 00:34:37,719 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-05-18 00:34:37,719 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:34:37,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2024-05-18 00:34:37,939 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:34:37,939 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:37,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:37,945 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:34:37,953 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:34:37,954 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:34:37,963 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:34:37,970 [ scc.git] DEBUG Already up to date. 2024-05-18 00:34:37,970 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:34:37,970 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:37,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:37,975 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:34:38,025 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:38,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:38,029 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:34:38,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-05-18 00:34:38,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-05-18 00:34:39,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-05-18 00:34:39,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-05-18 00:34:40,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:34:40,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-05-18 00:34:41,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:34:41,111 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-05-18 00:34:41,111 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:34:41,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-05-18 00:34:41,111 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:41,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:41,117 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:34:41,123 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:34:41,123 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:34:41,129 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:34:41,136 [ scc.git] DEBUG Already up to date. 2024-05-18 00:34:41,136 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-05-18 00:34:41,510 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-05-18 00:34:41,510 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-05-18 00:34:41,515 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:34:41,515 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:41,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:41,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-05-18 00:34:41,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:41,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-05-18 00:34:41,542 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-05-18 00:34:41,542 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-05-18 00:34:41,542 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-05-18 00:34:41,542 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-05-18 00:34:41,542 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-05-18 00:34:41,542 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-05-18 00:34:41,542 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-05-18 00:34:41,542 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-05-18 00:34:41,542 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-05-18 00:34:41,562 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:34:41,565 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-05-18 00:34:41,566 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-05-18 00:34:41,566 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-05-18 00:34:41,566 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-05-18 00:34:41,566 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-05-18 00:34:41,567 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-05-18 00:34:41,567 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-05-18 00:34:41,568 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-05-18 00:34:41,568 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-05-18 00:34:41,568 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-05-18 00:34:41,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:34:41,730 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:34:41,771 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:41,771 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:41,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:34:41,812 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:34:41,818 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f783d14fc10> has no local changes 2024-05-18 00:34:41,818 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#65 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/65/)' 2024-05-18 00:34:41,826 [ scc.git] DEBUG [detached HEAD 25be8f2] merge master -Dorg -Ssuccess-only 2024-05-18 00:34:41,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:34:41,826 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:34:42,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-05-18 00:34:42,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-05-18 00:34:43,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-05-18 00:34:43,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-05-18 00:34:44,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:34:44,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:34:45,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-05-18 00:34:45,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:34:45,522 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-05-18 00:34:45,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-05-18 00:34:46,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-05-18 00:34:46,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-05-18 00:34:47,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-05-18 00:34:47,388 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:34:47,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-05-18 00:34:47,388 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:47,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:47,394 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:34:47,398 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:34:47,398 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:34:47,404 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:34:47,409 [ scc.git] DEBUG Already up to date. 2024-05-18 00:34:47,410 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-05-18 00:34:47,810 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-05-18 00:34:47,810 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-05-18 00:34:47,817 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:34:47,817 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:47,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:47,823 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-05-18 00:34:47,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:47,836 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-05-18 00:34:47,849 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-05-18 00:34:47,850 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:34:47,853 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-05-18 00:34:47,854 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-05-18 00:34:47,854 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-05-18 00:34:48,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:34:48,014 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:34:48,061 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:34:48,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:34:48,067 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:34:48,118 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:34:48,126 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f783d0ea0d0> has no local changes 2024-05-18 00:34:48,126 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#65 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/65/)' 2024-05-18 00:34:48,137 [ scc.git] DEBUG [detached HEAD 912985e] merge master -Dorg -Ssuccess-only 2024-05-18 00:34:48,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:34:48,137 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:34:48,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-05-18 00:34:49,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-05-18 00:34:49,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-05-18 00:34:49,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-05-18 00:34:50,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:34:50,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:34:51,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-05-18 00:34:51,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-05-18 00:34:52,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-05-18 00:34:52,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-05-18 00:34:52,613 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-05-18 00:34:53,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-05-18 00:34:53,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-05-18 00:34:53,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-05-18 00:34:54,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:34:54,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:34:55,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-05-18 00:34:55,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-05-18 00:34:56,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:34:56,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:34:57,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-05-18 00:34:57,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-05-18 00:34:58,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-05-18 00:34:58,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-05-18 00:34:58,582 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-05-18 00:34:59,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-05-18 00:34:59,057 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-05-18 00:34:59,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None 2024-05-18 00:35:00,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None 2024-05-18 00:35:00,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-05-18 00:35:00,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-05-18 00:35:01,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-05-18 00:35:01,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:02,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-05-18 00:35:02,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:35:02,788 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-05-18 00:35:03,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-05-18 00:35:03,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-05-18 00:35:04,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-05-18 00:35:04,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:05,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:35:05,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-05-18 00:35:06,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:06,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-05-18 00:35:06,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-05-18 00:35:06,962 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-05-18 00:35:07,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-05-18 00:35:07,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-05-18 00:35:08,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-05-18 00:35:08,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-05-18 00:35:09,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-05-18 00:35:09,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:10,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-05-18 00:35:10,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:35:10,613 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-05-18 00:35:11,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-05-18 00:35:11,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-05-18 00:35:11,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:12,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-05-18 00:35:12,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:35:12,787 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-05-18 00:35:13,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-05-18 00:35:13,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-05-18 00:35:14,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-05-18 00:35:14,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:15,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-05-18 00:35:15,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:35:15,828 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-05-18 00:35:16,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-05-18 00:35:16,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-05-18 00:35:17,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-05-18 00:35:17,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:18,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-05-18 00:35:18,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:35:18,525 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-05-18 00:35:18,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-05-18 00:35:19,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-05-18 00:35:19,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-05-18 00:35:20,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-05-18 00:35:20,437 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:35:20,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-05-18 00:35:20,437 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:35:20,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:20,444 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:35:20,449 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:35:20,449 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:35:20,454 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:35:20,460 [ scc.git] DEBUG Already up to date. 2024-05-18 00:35:20,460 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-05-18 00:35:20,967 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-05-18 00:35:20,967 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-05-18 00:35:20,973 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-05-18 00:35:21,388 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-05-18 00:35:21,388 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-05-18 00:35:21,394 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-05-18 00:35:21,857 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-05-18 00:35:21,858 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-05-18 00:35:21,864 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-05-18 00:35:22,305 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-05-18 00:35:22,306 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-05-18 00:35:22,312 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-05-18 00:35:22,722 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-05-18 00:35:22,723 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-05-18 00:35:22,730 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-05-18 00:35:23,102 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-05-18 00:35:23,102 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-05-18 00:35:23,110 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-05-18 00:35:23,491 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-05-18 00:35:23,491 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-05-18 00:35:23,497 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-05-18 00:35:23,973 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-05-18 00:35:23,973 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-05-18 00:35:23,979 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:35:23,979 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:35:23,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:23,995 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-05-18 00:35:24,017 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:24,023 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-05-18 00:35:24,132 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-05-18 00:35:24,132 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-05-18 00:35:24,149 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:35:24,153 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-05-18 00:35:24,154 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-05-18 00:35:24,154 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-05-18 00:35:24,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:24,308 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-05-18 00:35:24,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:24,326 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-05-18 00:35:24,384 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-05-18 00:35:24,384 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-05-18 00:35:24,385 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:35:24,392 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-05-18 00:35:24,393 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-05-18 00:35:24,393 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-05-18 00:35:24,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:24,725 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-05-18 00:35:24,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:24,744 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-05-18 00:35:24,797 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-05-18 00:35:24,798 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:35:24,802 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-05-18 00:35:24,802 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-05-18 00:35:25,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:25,137 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-05-18 00:35:25,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:25,157 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-05-18 00:35:25,229 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-05-18 00:35:25,230 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-05-18 00:35:25,231 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:35:25,236 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-05-18 00:35:25,236 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-05-18 00:35:25,236 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-05-18 00:35:25,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:25,537 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-05-18 00:35:25,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:25,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-05-18 00:35:25,585 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:35:25,588 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-05-18 00:35:25,588 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-05-18 00:35:25,588 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-05-18 00:35:25,588 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-05-18 00:35:25,588 [ scc.git] DEBUG create mode 100644 connect.py 2024-05-18 00:35:25,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:25,938 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-05-18 00:35:25,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:25,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-05-18 00:35:26,099 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-05-18 00:35:26,100 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:35:26,103 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-05-18 00:35:26,104 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-05-18 00:35:26,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:26,344 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-05-18 00:35:26,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:26,360 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-05-18 00:35:26,393 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-05-18 00:35:26,394 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:35:26,399 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-05-18 00:35:26,399 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-05-18 00:35:26,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:26,757 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-05-18 00:35:26,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:26,775 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-05-18 00:35:26,892 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-05-18 00:35:26,893 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:35:26,901 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-05-18 00:35:26,901 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-05-18 00:35:27,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:27,149 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:35:27,190 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:35:27,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:27,194 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:35:27,230 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:35:27,239 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f783c08e760> has no local changes 2024-05-18 00:35:27,239 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Generated by OMERO-python-superbuild-push#65 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/65/)' 2024-05-18 00:35:27,266 [ scc.git] DEBUG [detached HEAD 27ffb73d] merge master -Dorg -Ssuccess-only 2024-05-18 00:35:27,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:35:27,267 [ scc.git] INFO Overriding base-branch from master to develop 2024-05-18 00:35:27,267 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:35:27,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-05-18 00:35:28,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-05-18 00:35:28,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-05-18 00:35:29,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-05-18 00:35:29,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-05-18 00:35:30,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-05-18 00:35:30,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-05-18 00:35:30,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-18 00:35:31,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:31,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-18 00:35:32,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:35:32,328 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-18 00:35:32,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-05-18 00:35:33,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-05-18 00:35:33,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-05-18 00:35:34,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-05-18 00:35:34,308 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:35:34,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-05-18 00:35:34,309 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:35:34,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:34,315 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-05-18 00:35:34,320 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:35:34,320 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-05-18 00:35:34,326 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-05-18 00:35:34,331 [ scc.git] DEBUG Already up to date. 2024-05-18 00:35:34,332 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-05-18 00:35:34,780 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-05-18 00:35:34,780 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-05-18 00:35:34,787 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:35:34,787 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:35:34,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:34,792 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-18 00:35:34,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:34,812 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-18 00:35:34,844 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-05-18 00:35:34,844 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-05-18 00:35:34,844 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-18 00:35:34,845 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-18 00:35:34,851 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-18 00:35:34,856 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-18 00:35:35,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:35,015 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-18 00:35:35,022 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-18 00:35:35,026 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#65](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/65/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/65/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-05-18 00:35:35,031 [ scc.config] DEBUG Found github.token 2024-05-18 00:35:35,031 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-05-18 00:35:35,031 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:35:35,079 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:35:35,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:35,086 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:35:35,131 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:35:35,138 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f783c08f3a0> has no local changes 2024-05-18 00:35:35,139 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#65 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/65/)' 2024-05-18 00:35:35,147 [ scc.git] DEBUG [detached HEAD 42283ca] merge master -Dorg -Ssuccess-only 2024-05-18 00:35:35,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:35:35,147 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:35:35,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-05-18 00:35:36,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None 2024-05-18 00:35:36,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None 2024-05-18 00:35:37,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6 HTTP/1.1" 200 None 2024-05-18 00:35:37,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:37,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:35:38,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6 HTTP/1.1" 200 None 2024-05-18 00:35:38,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6bba35505643d8b5095fba7c47d2b92adf36adc6?per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:39,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6 HTTP/1.1" 200 None 2024-05-18 00:35:39,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6/status HTTP/1.1" 200 None 2024-05-18 00:35:39,660 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status' 2024-05-18 00:35:40,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None 2024-05-18 00:35:40,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-05-18 00:35:41,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-05-18 00:35:41,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-05-18 00:35:41,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-05-18 00:35:42,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:42,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:35:43,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-05-18 00:35:43,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:44,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-05-18 00:35:44,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-05-18 00:35:44,695 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-05-18 00:35:45,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-05-18 00:35:45,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-05-18 00:35:46,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-05-18 00:35:46,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:47,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:35:47,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-05-18 00:35:47,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:48,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-05-18 00:35:48,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-05-18 00:35:48,753 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-05-18 00:35:49,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-05-18 00:35:49,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-05-18 00:35:50,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-05-18 00:35:50,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:35:51,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:35:51,112 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:35:51,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-05-18 00:35:51,113 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:35:51,113 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:51,119 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:35:51,124 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:35:51,124 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:35:51,129 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:35:51,159 [ scc.git] DEBUG Updating e1b1355eb..c6314d8a9 2024-05-18 00:35:51,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/553 HTTP/1.1" 200 None 2024-05-18 00:35:52,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/533 HTTP/1.1" 200 None 2024-05-18 00:35:52,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/542 HTTP/1.1" 200 None 2024-05-18 00:35:53,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/543 HTTP/1.1" 200 None 2024-05-18 00:35:54,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/549 HTTP/1.1" 200 None 2024-05-18 00:35:54,253 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-05-18 00:35:54,794 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-05-18 00:35:54,795 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-05-18 00:35:54,800 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-05-18 00:35:55,216 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-05-18 00:35:55,216 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-05-18 00:35:55,222 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-05-18 00:35:55,807 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-05-18 00:35:55,807 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-05-18 00:35:55,813 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:35:55,813 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:35:55,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:55,820 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-05-18 00:35:55,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:55,832 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-05-18 00:35:55,872 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-05-18 00:35:55,873 [ scc.git] DEBUG Auto-merging setup.py 2024-05-18 00:35:55,874 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:35:55,878 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-05-18 00:35:55,878 [ scc.git] DEBUG setup.py | 1 + 2024-05-18 00:35:55,878 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-05-18 00:35:56,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:56,040 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-05-18 00:35:56,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:56,053 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-05-18 00:35:56,116 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-05-18 00:35:56,116 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-05-18 00:35:56,117 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:35:56,122 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-05-18 00:35:56,122 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-05-18 00:35:56,122 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-05-18 00:35:56,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:56,456 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6bba35505643d8b5095fba7c47d2b92adf36adc6' 2024-05-18 00:35:56,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:56,471 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 6bba35505643d8b5095fba7c47d2b92adf36adc6' 2024-05-18 00:35:56,494 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-05-18 00:35:56,496 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:35:56,501 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 2 ++ 2024-05-18 00:35:56,501 [ scc.git] DEBUG omeroweb/webclient/tree.py | 7 +++++-- 2024-05-18 00:35:56,501 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 + 2024-05-18 00:35:56,501 [ scc.git] DEBUG 3 files changed, 8 insertions(+), 2 deletions(-) 2024-05-18 00:35:56,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:56,932 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:35:56,979 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:35:56,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:35:56,984 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:35:57,029 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:35:57,042 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f783c0a0910> has no local changes 2024-05-18 00:35:57,042 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Updating e1b1355eb..c6314d8a9 Previously merged: - PR 553 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 533 jburel 'use conda-forge channel' - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' - PR 543 knabar 'Block UI for some long running tasks' - PR 549 knabar 'Remove webgateway cache' Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 555 chris-allan 'Archive status' Generated by OMERO-python-superbuild-push#65 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/65/)' 2024-05-18 00:35:57,055 [ scc.git] DEBUG [detached HEAD 955be4fa1] merge master -Dorg -Ssuccess-only 2024-05-18 00:35:57,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:35:57,056 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:35:57,117 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-05-18 00:35:57,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:57,357 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-05-18 00:35:57,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:57,777 [ scc.config] DEBUG Found submodule.omero-py.url 2024-05-18 00:35:58,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:58,199 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-05-18 00:35:58,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:58,598 [ scc.config] DEBUG Found submodule.omero-web.url 2024-05-18 00:35:58,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:35:59,010 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:35:59,040 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f783f505460> has local changes 2024-05-18 00:35:59,040 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Updating e1b1355eb..c6314d8a9 Previously merged: - PR 553 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' - PR 533 jburel 'use conda-forge channel' - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' - PR 543 knabar 'Block UI for some long running tasks' - PR 549 knabar 'Remove webgateway cache' Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 555 chris-allan 'Archive status' Generated by OMERO-python-superbuild-push#65 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/65/)' 2024-05-18 00:35:59,052 [ scc.git] DEBUG [detached HEAD 991afe3] merge master -Dorg -Ssuccess-only 2024-05-18 00:35:59,053 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-05-18 00:35:59,053 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-05-18 00:35:59,053 [ scc.merge] INFO Already up to date. 2024-05-18 00:35:59,053 [ scc.merge] INFO 2024-05-18 00:35:59,053 [ scc.merge] INFO 2024-05-18 00:35:59,053 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-05-18 00:35:59,053 [ scc.merge] INFO Already up to date. 2024-05-18 00:35:59,053 [ scc.merge] INFO 2024-05-18 00:35:59,053 [ scc.merge] INFO Merged PRs: 2024-05-18 00:35:59,053 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-05-18 00:35:59,053 [ scc.merge] INFO 2024-05-18 00:35:59,053 [ scc.merge] INFO Repository: ome/omero-marshal 2024-05-18 00:35:59,053 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:35:59,053 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-05-18 00:35:59,053 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-05-18 00:35:59,053 [ scc.merge] INFO Already up to date. 2024-05-18 00:35:59,053 [ scc.merge] INFO 2024-05-18 00:35:59,053 [ scc.merge] INFO Merged PRs: 2024-05-18 00:35:59,053 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-05-18 00:35:59,053 [ scc.merge] INFO 2024-05-18 00:35:59,053 [ scc.merge] INFO Repository: ome/omero-py 2024-05-18 00:35:59,053 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:35:59,053 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu) 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-05-18 00:35:59,054 [ scc.merge] INFO Already up to date. 2024-05-18 00:35:59,054 [ scc.merge] INFO 2024-05-18 00:35:59,054 [ scc.merge] INFO Merged PRs: 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-05-18 00:35:59,054 [ scc.merge] INFO 2024-05-18 00:35:59,054 [ scc.merge] INFO Repository: ome/omero-scripts 2024-05-18 00:35:59,054 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-05-18 00:35:59,054 [ scc.merge] INFO Already up to date. 2024-05-18 00:35:59,054 [ scc.merge] INFO 2024-05-18 00:35:59,054 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-18 00:35:59,054 [ scc.merge] INFO 2024-05-18 00:35:59,054 [ scc.merge] INFO Repository: ome/omero-web 2024-05-18 00:35:59,054 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft) 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-05-18 00:35:59,054 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-05-18 00:35:59,054 [ scc.merge] INFO Updating e1b1355eb..c6314d8a9 2024-05-18 00:35:59,055 [ scc.merge] INFO Previously merged: 2024-05-18 00:35:59,055 [ scc.merge] INFO - PR 553 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' 2024-05-18 00:35:59,055 [ scc.merge] INFO - PR 533 jburel 'use conda-forge channel' 2024-05-18 00:35:59,055 [ scc.merge] INFO - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display' 2024-05-18 00:35:59,055 [ scc.merge] INFO - PR 543 knabar 'Block UI for some long running tasks' 2024-05-18 00:35:59,055 [ scc.merge] INFO - PR 549 knabar 'Remove webgateway cache' 2024-05-18 00:35:59,055 [ scc.merge] INFO 2024-05-18 00:35:59,055 [ scc.merge] INFO Merged PRs: 2024-05-18 00:35:59,055 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-05-18 00:35:59,055 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-05-18 00:35:59,055 [ scc.merge] INFO - PR 555 chris-allan 'Archive status' 2024-05-18 00:35:59,055 [ scc.merge] INFO 2024-05-18 00:35:59,055 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-18 00:35:59,055 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:35:59,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-05-18 00:35:59,061 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:35:59,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:35:59,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-05-18 00:35:59,065 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:35:59,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:35:59,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-05-18 00:35:59,070 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:35:59,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:35:59,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-05-18 00:35:59,075 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:35:59,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-05-18 00:35:59,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-05-18 00:35:59,080 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:35:59,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from a4307f4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 53a327b8 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 5a90893 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from e1b1355eb nothing to commit, working tree clean HEAD detached from ee4b0ba nothing to commit, working tree clean 2024-05-18 00:36:29,013 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS