![[Jenkins]](/jenkins/static/13aecd43/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 617 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 89851408b797e66df0f2e993b5e6fc50984c08a1 (refs/remotes/origin/master) Commit message: "Merge pull request #330 from ome/dependabot/submodules/omero-scripts-03b9116" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 89851408b797e66df0f2e993b5e6fc50984c08a1 # timeout=10 > git rev-list --no-walk 89851408b797e66df0f2e993b5e6fc50984c08a1 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 546 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (9.4 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.7-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.23-py3-none-any.whl.metadata (993 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.7-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.0-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.23-py3-none-any.whl (118 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.2 certifi-2025.8.3 cffi-2.0.0 charset_normalizer-3.4.3 cryptography-45.0.7 future-1.0.0 idna-3.10 pycparser-2.23 pyjwt-2.10.1 pynacl-1.6.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-09-13 00:34:28,487 [ scc.config] DEBUG Found github.token 2025-09-13 00:34:28,489 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-13 00:34:28,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:34:29,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:34:29,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-13 00:34:29,505 [ scc.gh] DEBUG 4659 remaining from 5000 (Reset at 01:09 2025-09-13 00:34:29,506 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-13 00:34:29,508 [ scc.git] DEBUG Check current status 2025-09-13 00:34:29,508 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-13 00:34:29,511 [ scc.git] DEBUG 8985140 Merge pull request #330 from ome/dependabot/submodules/omero-scripts-03b9116 2025-09-13 00:34:29,511 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-13 00:34:29,556 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-13 00:34:29,559 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-09-13 00:34:29,564 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-09-13 00:34:29,569 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-13 00:34:29,573 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-13 00:34:29,576 [ scc.config] DEBUG Found remote.origin.url 2025-09-13 00:34:29,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-09-13 00:34:30,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-13 00:34:30,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-13 00:34:31,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-13 00:34:31,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-13 00:34:31,789 [ scc.git] DEBUG Resetting... 2025-09-13 00:34:31,789 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-13 00:34:31,794 [ scc.git] DEBUG HEAD is now at 8985140 Merge pull request #330 from ome/dependabot/submodules/omero-scripts-03b9116 2025-09-13 00:34:31,794 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-13 00:34:31,851 [ scc.git] DEBUG Check current status 2025-09-13 00:34:31,851 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-13 00:34:31,854 [ scc.git] DEBUG 8985140 Merge pull request #330 from ome/dependabot/submodules/omero-scripts-03b9116 2025-09-13 00:34:31,854 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-13 00:34:31,899 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-13 00:34:31,903 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-09-13 00:34:31,908 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-09-13 00:34:31,913 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-13 00:34:31,917 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-13 00:34:31,918 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-13 00:34:31,919 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-13 00:34:31,919 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-13 00:34:31,919 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-13 00:34:31,919 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-13 00:34:31,919 [ scc.repo] DEBUG ## PRs found: 2025-09-13 00:34:32,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-09-13 00:34:32,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/331 HTTP/1.1" 200 None 2025-09-13 00:34:32,913 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-13 00:34:32,913 [ scc.repo] DEBUG - PR 331 dependabot[bot] 'Bump omero-py from `70b6235` to `edf7ff5`' 2025-09-13 00:34:32,913 [ scc.repo] DEBUG ## Branches found: 2025-09-13 00:34:32,913 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:34:32,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:34:32,915 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-13 00:34:32,918 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-13 00:34:32,918 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-13 00:34:32,921 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-13 00:34:32,924 [ scc.git] DEBUG Already up to date. 2025-09-13 00:34:32,924 [ scc.git] DEBUG Calling 'git fetch origin pull/331/head' 2025-09-13 00:34:33,211 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-09-13 00:34:33,211 [ scc.git] DEBUG * branch refs/pull/331/head -> FETCH_HEAD 2025-09-13 00:34:33,218 [ scc.git] DEBUG ## Unique users: [] 2025-09-13 00:34:33,218 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:34:33,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:34:33,220 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...87eaea59da5804987cb50dad0069813c3d859b4c' 2025-09-13 00:34:33,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:34:33,225 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 331 (Bump omero-py from `70b6235` to `edf7ff5`) 87eaea59da5804987cb50dad0069813c3d859b4c' 2025-09-13 00:34:33,235 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:34:33,238 [ scc.git] DEBUG omero-py | 2 +- 2025-09-13 00:34:33,238 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-13 00:34:33,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:34:33,416 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-13 00:34:33,478 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'edf7ff58e57e27228b5ea00d94d4a0932978788b' 2025-09-13 00:34:33,479 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:34:33,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:34:33,481 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-13 00:34:33,515 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f21f0454fd0> has no local changes 2025-09-13 00:34:33,515 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 331 dependabot[bot] 'Bump omero-py from `70b6235` to `edf7ff5`' Generated by OMERO-python-superbuild-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/518/)' 2025-09-13 00:34:33,542 [ scc.git] DEBUG [detached HEAD 3ee5461] merge master -Dorg -Snone 2025-09-13 00:34:33,542 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-09-13 00:34:33,542 [ scc.merge] INFO Already up to date. 2025-09-13 00:34:33,543 [ scc.merge] INFO 2025-09-13 00:34:33,543 [ scc.merge] INFO Merged PRs: 2025-09-13 00:34:33,543 [ scc.merge] INFO - PR 331 dependabot[bot] 'Bump omero-py from `70b6235` to `edf7ff5`' 2025-09-13 00:34:33,543 [ scc.merge] INFO 2025-09-13 00:34:33,543 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-13 00:34:33,543 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-09-13 00:34:35,537 [ scc.config] DEBUG Found github.token 2025-09-13 00:34:35,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-09-13 00:34:35,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:34:36,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:34:36,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-09-13 00:34:36,530 [ scc.gh] DEBUG 4649 remaining from 5000 (Reset at 01:09 2025-09-13 00:34:36,531 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-13 00:34:36,533 [ scc.git] DEBUG Check current status 2025-09-13 00:34:36,534 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-13 00:34:36,536 [ scc.git] DEBUG 3ee5461 merge master -Dorg -Snone 2025-09-13 00:34:36,536 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-13 00:34:36,581 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-13 00:34:36,585 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-09-13 00:34:36,590 [ scc.git] DEBUG edf7ff58e57e27228b5ea00d94d4a0932978788b omero-py (v5.21.1-1-gedf7ff58) 2025-09-13 00:34:36,594 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-13 00:34:36,599 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-13 00:34:36,601 [ scc.config] DEBUG Found remote.origin.url 2025-09-13 00:34:36,602 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-09-13 00:34:36,603 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-09-13 00:34:37,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-09-13 00:34:37,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-13 00:34:37,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-13 00:34:38,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-13 00:34:38,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-13 00:34:38,794 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:34:38,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-09-13 00:34:38,844 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-13 00:34:38,846 [ scc.git] DEBUG Check current status 2025-09-13 00:34:38,846 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-13 00:34:38,849 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-09-13 00:34:38,849 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-13 00:34:38,891 [ scc.config] DEBUG Found remote.origin.url 2025-09-13 00:34:39,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-09-13 00:34:39,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-13 00:34:40,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-13 00:34:40,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-13 00:34:41,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-13 00:34:41,104 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:34:41,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:34:41,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-09-13 00:34:41,145 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-13 00:34:41,147 [ scc.git] DEBUG Check current status 2025-09-13 00:34:41,147 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-13 00:34:41,150 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-09-13 00:34:41,150 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-13 00:34:41,191 [ scc.config] DEBUG Found remote.origin.url 2025-09-13 00:34:41,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-09-13 00:34:42,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-13 00:34:42,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-13 00:34:42,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-13 00:34:43,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-13 00:34:43,368 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:34:43,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:34:43,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-09-13 00:34:43,410 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-13 00:34:43,412 [ scc.git] DEBUG Check current status 2025-09-13 00:34:43,412 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-13 00:34:43,414 [ scc.git] DEBUG edf7ff58 Bump version: 5.21.1 → 5.21.2.dev0 2025-09-13 00:34:43,415 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-13 00:34:43,458 [ scc.config] DEBUG Found remote.origin.url 2025-09-13 00:34:43,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-09-13 00:34:44,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-13 00:34:44,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-13 00:34:45,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-13 00:34:45,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-13 00:34:45,654 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:34:45,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:34:45,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-09-13 00:34:45,696 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-13 00:34:45,698 [ scc.git] DEBUG Check current status 2025-09-13 00:34:45,698 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-13 00:34:45,701 [ scc.git] DEBUG 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-09-13 00:34:45,701 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-13 00:34:45,742 [ scc.config] DEBUG Found remote.origin.url 2025-09-13 00:34:45,742 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-09-13 00:34:46,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-09-13 00:34:46,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-13 00:34:47,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-13 00:34:47,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-13 00:34:47,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-13 00:34:47,908 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:34:47,948 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:34:47,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-09-13 00:34:47,949 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-09-13 00:34:47,951 [ scc.git] DEBUG Check current status 2025-09-13 00:34:47,951 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-13 00:34:47,954 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0 2025-09-13 00:34:47,955 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-13 00:34:47,996 [ scc.config] DEBUG Found remote.origin.url 2025-09-13 00:34:48,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-09-13 00:34:48,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-09-13 00:34:49,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-09-13 00:34:49,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-09-13 00:34:50,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-09-13 00:34:50,265 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:34:50,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:34:50,309 [ scc.git] DEBUG Resetting... 2025-09-13 00:34:50,309 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-09-13 00:34:50,314 [ scc.git] DEBUG HEAD is now at 3ee5461 merge master -Dorg -Snone 2025-09-13 00:34:50,314 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-09-13 00:34:50,370 [ scc.git] DEBUG Check current status 2025-09-13 00:34:50,370 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-09-13 00:34:50,372 [ scc.git] DEBUG 3ee5461 merge master -Dorg -Snone 2025-09-13 00:34:50,372 [ scc.git] DEBUG Calling 'git submodule status' 2025-09-13 00:34:50,413 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-09-13 00:34:50,416 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-09-13 00:34:50,421 [ scc.git] DEBUG edf7ff58e57e27228b5ea00d94d4a0932978788b omero-py (v5.21.1-1-gedf7ff58) 2025-09-13 00:34:50,426 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116) 2025-09-13 00:34:50,430 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-09-13 00:34:50,431 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-09-13 00:34:50,431 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-09-13 00:34:50,431 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-09-13 00:34:50,431 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-09-13 00:34:50,431 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-09-13 00:34:50,431 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-09-13 00:34:50,431 [ scc.repo] DEBUG ## PRs found: 2025-09-13 00:34:50,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2025-09-13 00:34:51,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/331 HTTP/1.1" 200 None 2025-09-13 00:34:51,305 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-13 00:34:51,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/87eaea59da5804987cb50dad0069813c3d859b4c HTTP/1.1" 200 None 2025-09-13 00:34:52,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/87eaea59da5804987cb50dad0069813c3d859b4c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:34:52,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/87eaea59da5804987cb50dad0069813c3d859b4c HTTP/1.1" 200 None 2025-09-13 00:34:53,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/87eaea59da5804987cb50dad0069813c3d859b4c?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:34:53,341 [ scc.repo] DEBUG - PR 331 dependabot[bot] 'Bump omero-py from `70b6235` to `edf7ff5`' 2025-09-13 00:34:53,341 [ scc.repo] DEBUG ## Branches found: 2025-09-13 00:34:53,341 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:34:53,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:34:53,344 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-13 00:34:53,346 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-13 00:34:53,346 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-13 00:34:53,349 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-13 00:34:53,352 [ scc.git] DEBUG Already up to date. 2025-09-13 00:34:53,352 [ scc.git] DEBUG Calling 'git fetch origin pull/331/head' 2025-09-13 00:34:53,644 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2025-09-13 00:34:53,644 [ scc.git] DEBUG * branch refs/pull/331/head -> FETCH_HEAD 2025-09-13 00:34:53,651 [ scc.git] DEBUG ## Unique users: [] 2025-09-13 00:34:53,651 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:34:53,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:34:53,653 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...87eaea59da5804987cb50dad0069813c3d859b4c' 2025-09-13 00:34:53,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:34:53,658 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 331 (Bump omero-py from `70b6235` to `edf7ff5`) 87eaea59da5804987cb50dad0069813c3d859b4c' 2025-09-13 00:34:53,661 [ scc.git] DEBUG Already up to date. 2025-09-13 00:34:53,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:34:53,813 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-13 00:34:53,855 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:34:53,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:34:53,858 [ scc.repo] DEBUG ## PRs found: 2025-09-13 00:34:54,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-09-13 00:34:54,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/26 HTTP/1.1" 200 None 2025-09-13 00:34:54,822 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-13 00:34:55,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a HTTP/1.1" 200 None 2025-09-13 00:34:55,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:34:56,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:34:57,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/38aa63d7d4014725060e4ecaa159922370485c5a HTTP/1.1" 200 None 2025-09-13 00:34:57,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/38aa63d7d4014725060e4ecaa159922370485c5a?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:34:57,444 [ scc.repo] DEBUG - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-13 00:34:57,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-09-13 00:34:58,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-09-13 00:34:58,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-09-13 00:34:59,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:34:59,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-09-13 00:35:00,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:35:00,306 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-09-13 00:35:00,306 [ scc.repo] DEBUG ## Branches found: 2025-09-13 00:35:00,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-09-13 00:35:00,306 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:00,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:00,309 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-13 00:35:00,312 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-13 00:35:00,312 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-13 00:35:00,315 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-13 00:35:00,318 [ scc.git] DEBUG Already up to date. 2025-09-13 00:35:00,318 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-09-13 00:35:00,611 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-09-13 00:35:00,611 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-09-13 00:35:00,615 [ scc.git] DEBUG Calling 'git fetch origin pull/26/head' 2025-09-13 00:35:00,896 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-09-13 00:35:00,896 [ scc.git] DEBUG * branch refs/pull/26/head -> FETCH_HEAD 2025-09-13 00:35:00,900 [ scc.git] DEBUG ## Unique users: [] 2025-09-13 00:35:00,900 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:00,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:00,903 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-09-13 00:35:00,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:00,909 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-09-13 00:35:00,923 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-09-13 00:35:00,923 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-09-13 00:35:00,923 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-09-13 00:35:00,923 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-09-13 00:35:00,923 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-09-13 00:35:00,923 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-09-13 00:35:00,923 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-09-13 00:35:00,923 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-09-13 00:35:00,923 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-09-13 00:35:00,924 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:35:00,928 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-09-13 00:35:00,928 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-09-13 00:35:00,928 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-09-13 00:35:00,928 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-09-13 00:35:00,928 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-09-13 00:35:00,928 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-09-13 00:35:00,928 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-09-13 00:35:00,928 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-09-13 00:35:00,928 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-09-13 00:35:00,929 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-09-13 00:35:01,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:35:01,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38aa63d7d4014725060e4ecaa159922370485c5a' 2025-09-13 00:35:01,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:01,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 26 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38aa63d7d4014725060e4ecaa159922370485c5a' 2025-09-13 00:35:01,086 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:35:01,089 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-13 00:35:01,089 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-13 00:35:01,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:35:01,550 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-13 00:35:01,592 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:01,592 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:01,594 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:35:01,635 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-13 00:35:01,639 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1396988e90> has no local changes 2025-09-13 00:35:01,639 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-python-superbuild-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/518/)' 2025-09-13 00:35:01,646 [ scc.git] DEBUG [detached HEAD 82a9aca] merge master -Dorg -Ssuccess-only 2025-09-13 00:35:01,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:35:01,646 [ scc.repo] DEBUG ## PRs found: 2025-09-13 00:35:02,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-09-13 00:35:02,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/85 HTTP/1.1" 200 None 2025-09-13 00:35:02,658 [ scc.repo] DEBUG # ... Include label: dependencies 2025-09-13 00:35:03,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1ff3bb78434dee715c2029077581cdbbfdaedce8 HTTP/1.1" 200 None 2025-09-13 00:35:03,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1ff3bb78434dee715c2029077581cdbbfdaedce8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:04,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1ff3bb78434dee715c2029077581cdbbfdaedce8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:35:04,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1ff3bb78434dee715c2029077581cdbbfdaedce8 HTTP/1.1" 200 None 2025-09-13 00:35:05,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1ff3bb78434dee715c2029077581cdbbfdaedce8?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:35:05,315 [ scc.repo] DEBUG - PR 85 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-13 00:35:05,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-09-13 00:35:06,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-09-13 00:35:06,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-09-13 00:35:07,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-09-13 00:35:07,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-09-13 00:35:08,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:08,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-09-13 00:35:09,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:35:09,025 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-09-13 00:35:09,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-09-13 00:35:10,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-09-13 00:35:10,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-09-13 00:35:10,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-09-13 00:35:10,933 [ scc.repo] DEBUG ## Branches found: 2025-09-13 00:35:10,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-09-13 00:35:10,933 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:10,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:10,935 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-13 00:35:10,938 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-13 00:35:10,938 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-13 00:35:10,941 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-13 00:35:10,944 [ scc.git] DEBUG Already up to date. 2025-09-13 00:35:10,944 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-09-13 00:35:11,233 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-09-13 00:35:11,233 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-09-13 00:35:11,237 [ scc.git] DEBUG Calling 'git fetch origin pull/85/head' 2025-09-13 00:35:11,510 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-09-13 00:35:11,510 [ scc.git] DEBUG * branch refs/pull/85/head -> FETCH_HEAD 2025-09-13 00:35:11,515 [ scc.git] DEBUG ## Unique users: [] 2025-09-13 00:35:11,515 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:11,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:11,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-09-13 00:35:11,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:11,523 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-09-13 00:35:11,533 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-09-13 00:35:11,534 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:35:11,537 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-09-13 00:35:11,537 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-09-13 00:35:11,537 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-09-13 00:35:11,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:35:11,677 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1ff3bb78434dee715c2029077581cdbbfdaedce8' 2025-09-13 00:35:11,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:11,684 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 85 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1ff3bb78434dee715c2029077581cdbbfdaedce8' 2025-09-13 00:35:11,693 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:35:11,696 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-09-13 00:35:11,696 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-13 00:35:12,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:35:12,089 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-13 00:35:12,131 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:12,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:12,133 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:35:12,174 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-13 00:35:12,178 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1398108250> has no local changes 2025-09-13 00:35:12,178 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' - PR 85 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-python-superbuild-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/518/)' 2025-09-13 00:35:12,185 [ scc.git] DEBUG [detached HEAD 80eaa7d] merge master -Dorg -Ssuccess-only 2025-09-13 00:35:12,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:35:12,185 [ scc.repo] DEBUG ## PRs found: 2025-09-13 00:35:12,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-09-13 00:35:13,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2025-09-13 00:35:13,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2025-09-13 00:35:14,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-09-13 00:35:14,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-09-13 00:35:15,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-09-13 00:35:15,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-09-13 00:35:16,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-09-13 00:35:16,255 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-09-13 00:35:16,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-09-13 00:35:17,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-09-13 00:35:17,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-09-13 00:35:18,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:18,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-09-13 00:35:19,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:35:19,219 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-09-13 00:35:19,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-09-13 00:35:20,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-09-13 00:35:20,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-09-13 00:35:21,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:21,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:35:22,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-09-13 00:35:22,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-09-13 00:35:23,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-09-13 00:35:23,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:24,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-09-13 00:35:24,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:35:24,785 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-09-13 00:35:25,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-09-13 00:35:25,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-09-13 00:35:26,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-09-13 00:35:26,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:27,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-09-13 00:35:27,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:35:27,768 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-09-13 00:35:28,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-09-13 00:35:28,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-09-13 00:35:29,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-09-13 00:35:29,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-09-13 00:35:30,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-09-13 00:35:30,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:31,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-09-13 00:35:31,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:35:31,614 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-09-13 00:35:31,615 [ scc.repo] DEBUG ## Branches found: 2025-09-13 00:35:31,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-09-13 00:35:31,615 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:31,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:31,618 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-13 00:35:31,620 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-13 00:35:31,620 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-13 00:35:31,623 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-13 00:35:31,627 [ scc.git] DEBUG Already up to date. 2025-09-13 00:35:31,627 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-09-13 00:35:31,933 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-13 00:35:31,933 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-09-13 00:35:31,938 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-09-13 00:35:32,222 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-13 00:35:32,222 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-09-13 00:35:32,227 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-09-13 00:35:32,535 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-13 00:35:32,535 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-09-13 00:35:32,539 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-09-13 00:35:32,836 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-09-13 00:35:32,836 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-09-13 00:35:32,840 [ scc.git] DEBUG ## Unique users: [] 2025-09-13 00:35:32,840 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:32,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:32,843 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-09-13 00:35:32,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:32,858 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-09-13 00:35:32,882 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-09-13 00:35:32,882 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-09-13 00:35:32,883 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:35:32,888 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-09-13 00:35:32,888 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-09-13 00:35:32,888 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-09-13 00:35:33,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:35:33,086 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-09-13 00:35:33,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:33,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-09-13 00:35:33,122 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:35:33,126 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-09-13 00:35:33,126 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-09-13 00:35:33,126 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-09-13 00:35:33,126 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-09-13 00:35:33,126 [ scc.git] DEBUG create mode 100644 connect.py 2025-09-13 00:35:33,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:35:33,492 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-09-13 00:35:33,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:33,509 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-09-13 00:35:33,531 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-09-13 00:35:33,533 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:35:33,537 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-09-13 00:35:33,537 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-09-13 00:35:33,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:35:33,875 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-09-13 00:35:33,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:33,891 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-09-13 00:35:33,924 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-09-13 00:35:33,926 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:35:33,933 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-09-13 00:35:33,933 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-09-13 00:35:34,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:35:34,282 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-13 00:35:34,324 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:34,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:34,326 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:35:34,367 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-13 00:35:34,374 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1396590c10> has no local changes 2025-09-13 00:35:34,374 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Generated by OMERO-python-superbuild-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/518/)' 2025-09-13 00:35:34,381 [ scc.git] DEBUG [detached HEAD 16563313] merge master -Dorg -Ssuccess-only 2025-09-13 00:35:34,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:35:34,382 [ scc.git] INFO Overriding base-branch from master to develop 2025-09-13 00:35:34,382 [ scc.repo] DEBUG ## PRs found: 2025-09-13 00:35:34,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-09-13 00:35:35,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-09-13 00:35:35,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-09-13 00:35:36,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-13 00:35:36,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:37,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:35:37,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-09-13 00:35:38,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:35:38,295 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-13 00:35:38,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-09-13 00:35:39,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-09-13 00:35:39,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-13 00:35:40,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:40,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-09-13 00:35:41,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:35:41,149 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-13 00:35:41,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-09-13 00:35:42,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-09-13 00:35:42,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-09-13 00:35:43,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-09-13 00:35:43,155 [ scc.repo] DEBUG ## Branches found: 2025-09-13 00:35:43,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-09-13 00:35:43,155 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:43,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:43,158 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-09-13 00:35:43,160 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-13 00:35:43,160 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-09-13 00:35:43,163 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-09-13 00:35:43,166 [ scc.git] DEBUG Already up to date. 2025-09-13 00:35:43,167 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-09-13 00:35:43,457 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-09-13 00:35:43,457 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-09-13 00:35:43,461 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-09-13 00:35:43,753 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-09-13 00:35:43,754 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-09-13 00:35:43,758 [ scc.git] DEBUG ## Unique users: [] 2025-09-13 00:35:43,758 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:43,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:43,761 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-13 00:35:43,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:43,769 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-13 00:35:43,779 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-09-13 00:35:43,780 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-09-13 00:35:43,780 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-09-13 00:35:43,782 [ scc.git] DEBUG Calling 'git reset --hard 03b9116196e1a799dd18a666559613d912be01a5' 2025-09-13 00:35:43,787 [ scc.git] DEBUG HEAD is now at 03b9116 Merge pull request #228 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0 2025-09-13 00:35:43,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:35:43,959 [ scc.git] DEBUG Calling 'git merge-base 03b9116196e1a799dd18a666559613d912be01a5 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-09-13 00:35:43,965 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..03b9116196e1a799dd18a666559613d912be01a5' 2025-09-13 00:35:43,969 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#518](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/518/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/518/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-09-13 00:35:43,971 [ scc.config] DEBUG Found github.token 2025-09-13 00:35:43,971 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-09-13 00:35:43,971 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-13 00:35:43,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:43,978 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-09-13 00:35:43,988 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:35:43,992 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-09-13 00:35:43,992 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-09-13 00:35:44,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:35:44,353 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-13 00:35:44,396 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:35:44,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:35:44,399 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:35:44,439 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-13 00:35:44,443 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1396942050> has no local changes 2025-09-13 00:35:44,443 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/518/)' 2025-09-13 00:35:44,450 [ scc.git] DEBUG [detached HEAD 54c38f1] merge master -Dorg -Ssuccess-only 2025-09-13 00:35:44,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:35:44,450 [ scc.repo] DEBUG ## PRs found: 2025-09-13 00:35:45,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-09-13 00:35:45,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None 2025-09-13 00:35:45,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None 2025-09-13 00:35:46,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-09-13 00:35:46,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:47,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:35:48,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-09-13 00:35:48,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:48,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-09-13 00:35:49,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None 2025-09-13 00:35:49,405 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4' 2025-09-13 00:35:49,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-09-13 00:35:50,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-09-13 00:35:50,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:51,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:35:51,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-09-13 00:35:52,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:52,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-09-13 00:35:53,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-09-13 00:35:53,287 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-09-13 00:35:53,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-09-13 00:35:54,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-09-13 00:35:54,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6 HTTP/1.1" 200 None 2025-09-13 00:35:55,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:55,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:35:56,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6 HTTP/1.1" 200 None 2025-09-13 00:35:56,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/f3c42d33bf789591b0515c28a15dceab6b82f0c6?per_page=1 HTTP/1.1" 200 None 2025-09-13 00:35:57,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6 HTTP/1.1" 200 None 2025-09-13 00:35:57,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/f3c42d33bf789591b0515c28a15dceab6b82f0c6/status HTTP/1.1" 200 None 2025-09-13 00:35:57,615 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-09-13 00:35:58,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-09-13 00:35:58,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-09-13 00:35:59,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-09-13 00:35:59,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:00,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:36:00,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-09-13 00:36:01,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:01,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-09-13 00:36:01,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-09-13 00:36:01,926 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-09-13 00:36:02,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-09-13 00:36:02,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-09-13 00:36:03,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-09-13 00:36:03,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:04,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:36:04,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-09-13 00:36:05,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:05,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-09-13 00:36:06,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-09-13 00:36:06,285 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-09-13 00:36:06,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-09-13 00:36:07,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-09-13 00:36:07,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:08,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:36:08,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-09-13 00:36:09,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:09,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-09-13 00:36:10,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-09-13 00:36:10,121 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-09-13 00:36:10,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-09-13 00:36:11,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-09-13 00:36:11,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-09-13 00:36:12,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:12,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:36:13,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-09-13 00:36:13,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:13,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-09-13 00:36:14,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-09-13 00:36:14,387 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-09-13 00:36:14,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-09-13 00:36:15,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-09-13 00:36:15,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-09-13 00:36:16,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:16,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-09-13 00:36:17,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-09-13 00:36:17,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:18,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-09-13 00:36:18,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-09-13 00:36:18,914 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-09-13 00:36:19,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-09-13 00:36:19,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-09-13 00:36:20,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-09-13 00:36:20,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-09-13 00:36:21,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-09-13 00:36:21,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:22,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-09-13 00:36:22,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:36:22,685 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-09-13 00:36:23,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-09-13 00:36:23,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-09-13 00:36:24,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-09-13 00:36:24,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:25,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-09-13 00:36:25,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:36:25,534 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-09-13 00:36:26,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-09-13 00:36:26,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-09-13 00:36:27,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-09-13 00:36:27,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-09-13 00:36:28,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-09-13 00:36:28,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2 2025-09-13 00:36:28,450 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2025-09-13 00:36:28,451 [ scc.repo] DEBUG ## Branches found: 2025-09-13 00:36:28,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-09-13 00:36:28,451 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:36:28,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:28,454 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-09-13 00:36:28,456 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-09-13 00:36:28,456 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-09-13 00:36:28,460 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-09-13 00:36:28,463 [ scc.git] DEBUG Already up to date. 2025-09-13 00:36:28,463 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2025-09-13 00:36:28,751 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-13 00:36:28,752 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2025-09-13 00:36:28,757 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-09-13 00:36:29,046 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-13 00:36:29,046 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-09-13 00:36:29,050 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-09-13 00:36:29,339 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-13 00:36:29,339 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-09-13 00:36:29,343 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-09-13 00:36:29,623 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-13 00:36:29,623 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-09-13 00:36:29,627 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-09-13 00:36:29,923 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-13 00:36:29,923 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-09-13 00:36:29,928 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-09-13 00:36:30,208 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-13 00:36:30,208 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-09-13 00:36:30,213 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-09-13 00:36:30,492 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-13 00:36:30,492 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-09-13 00:36:30,497 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-09-13 00:36:30,778 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-13 00:36:30,778 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-09-13 00:36:30,783 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-09-13 00:36:31,069 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-13 00:36:31,070 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-09-13 00:36:31,074 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-09-13 00:36:31,357 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-13 00:36:31,357 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-09-13 00:36:31,363 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head' 2025-09-13 00:36:31,838 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-09-13 00:36:31,838 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD 2025-09-13 00:36:31,843 [ scc.git] DEBUG ## Unique users: [] 2025-09-13 00:36:31,843 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:36:31,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:31,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200' 2025-09-13 00:36:31,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:31,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200' 2025-09-13 00:36:31,877 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:36:31,881 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +- 2025-09-13 00:36:31,881 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++- 2025-09-13 00:36:31,881 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +- 2025-09-13 00:36:31,881 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +- 2025-09-13 00:36:31,882 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +- 2025-09-13 00:36:31,882 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++- 2025-09-13 00:36:31,882 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++- 2025-09-13 00:36:31,882 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +- 2025-09-13 00:36:31,882 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +- 2025-09-13 00:36:31,882 [ scc.git] DEBUG test/unit/test_web.py | 1 + 2025-09-13 00:36:31,882 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-) 2025-09-13 00:36:32,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:32,044 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-09-13 00:36:32,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:32,056 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-09-13 00:36:32,077 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-09-13 00:36:32,077 [ scc.git] DEBUG Auto-merging setup.py 2025-09-13 00:36:32,079 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:36:32,083 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-09-13 00:36:32,083 [ scc.git] DEBUG setup.py | 1 + 2025-09-13 00:36:32,083 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-09-13 00:36:32,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:32,431 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-09-13 00:36:32,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:32,442 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-09-13 00:36:32,465 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-09-13 00:36:32,465 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-09-13 00:36:32,467 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:36:32,471 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-09-13 00:36:32,471 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-09-13 00:36:32,471 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-09-13 00:36:32,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:32,826 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-09-13 00:36:32,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:32,838 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-09-13 00:36:32,860 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:36:32,864 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-09-13 00:36:32,864 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-09-13 00:36:33,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:33,235 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-09-13 00:36:33,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:33,246 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-09-13 00:36:33,268 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:36:33,272 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-09-13 00:36:33,272 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-09-13 00:36:33,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:33,633 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-09-13 00:36:33,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:33,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-09-13 00:36:33,668 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:36:33,673 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-09-13 00:36:33,673 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-09-13 00:36:33,673 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-09-13 00:36:33,673 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-09-13 00:36:33,673 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-09-13 00:36:33,674 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-09-13 00:36:33,674 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-09-13 00:36:33,674 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-09-13 00:36:33,674 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-09-13 00:36:33,674 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-09-13 00:36:33,674 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-09-13 00:36:33,674 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-09-13 00:36:34,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:34,017 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-09-13 00:36:34,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:34,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-09-13 00:36:34,058 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-09-13 00:36:34,060 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:36:34,066 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-09-13 00:36:34,066 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-09-13 00:36:34,067 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-09-13 00:36:34,067 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-09-13 00:36:34,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:34,424 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-09-13 00:36:34,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:34,436 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-09-13 00:36:34,459 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:36:34,464 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-09-13 00:36:34,464 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-09-13 00:36:34,464 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-09-13 00:36:34,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:34,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f3c42d33bf789591b0515c28a15dceab6b82f0c6' 2025-09-13 00:36:34,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:34,836 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) f3c42d33bf789591b0515c28a15dceab6b82f0c6' 2025-09-13 00:36:34,861 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css 2025-09-13 00:36:34,863 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:36:34,868 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 2 +- 2025-09-13 00:36:34,868 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 44 +++++++++++++++++++++- 2025-09-13 00:36:34,868 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 ++++++++++----- 2025-09-13 00:36:34,868 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 + 2025-09-13 00:36:34,868 [ scc.git] DEBUG 4 files changed, 67 insertions(+), 12 deletions(-) 2025-09-13 00:36:35,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:35,223 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-09-13 00:36:35,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:35,235 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-09-13 00:36:35,258 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-09-13 00:36:35,260 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:36:35,264 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-09-13 00:36:35,264 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-09-13 00:36:35,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:35,609 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-09-13 00:36:35,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:35,621 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-09-13 00:36:35,643 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-09-13 00:36:35,645 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-09-13 00:36:35,649 [ scc.git] DEBUG omeroweb/settings.py | 4 ++-- 2025-09-13 00:36:35,649 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-09-13 00:36:36,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:36,010 [ scc.git] DEBUG Calling 'git submodule update' 2025-09-13 00:36:36,052 [ scc.git] DEBUG Get sha1 of %s 2025-09-13 00:36:36,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-09-13 00:36:36,054 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:36:36,097 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-13 00:36:36,106 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f139645b910> has no local changes 2025-09-13 00:36:36,106 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/518/)' 2025-09-13 00:36:36,115 [ scc.git] DEBUG [detached HEAD 4dd1f9d0f] merge master -Dorg -Ssuccess-only 2025-09-13 00:36:36,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:36:36,116 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-09-13 00:36:36,164 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-09-13 00:36:36,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:36,424 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-09-13 00:36:36,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:36,831 [ scc.config] DEBUG Found submodule.omero-py.url 2025-09-13 00:36:37,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:37,236 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-09-13 00:36:37,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:37,719 [ scc.config] DEBUG Found submodule.omero-web.url 2025-09-13 00:36:38,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-09-13 00:36:38,157 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-09-13 00:36:38,185 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f139810a610> has local changes 2025-09-13 00:36:38,185 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 331 dependabot[bot] 'Bump omero-py from `70b6235` to `edf7ff5`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' - PR 85 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#518 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/518/)' 2025-09-13 00:36:38,193 [ scc.git] DEBUG [detached HEAD 197e723] merge master -Dorg -Ssuccess-only 2025-09-13 00:36:38,193 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-09-13 00:36:38,193 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-09-13 00:36:38,194 [ scc.merge] INFO Already up to date. 2025-09-13 00:36:38,194 [ scc.merge] INFO 2025-09-13 00:36:38,194 [ scc.merge] INFO Merged PRs: 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 331 dependabot[bot] 'Bump omero-py from `70b6235` to `edf7ff5`' 2025-09-13 00:36:38,194 [ scc.merge] INFO 2025-09-13 00:36:38,194 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-09-13 00:36:38,194 [ scc.merge] INFO Already up to date. 2025-09-13 00:36:38,194 [ scc.merge] INFO 2025-09-13 00:36:38,194 [ scc.merge] INFO Merged PRs: 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 26 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-13 00:36:38,194 [ scc.merge] INFO 2025-09-13 00:36:38,194 [ scc.merge] INFO Repository: ome/omero-marshal 2025-09-13 00:36:38,194 [ scc.merge] INFO Excluded PRs: 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-09-13 00:36:38,194 [ scc.merge] INFO Already up to date. 2025-09-13 00:36:38,194 [ scc.merge] INFO 2025-09-13 00:36:38,194 [ scc.merge] INFO Merged PRs: 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 85 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2025-09-13 00:36:38,194 [ scc.merge] INFO 2025-09-13 00:36:38,194 [ scc.merge] INFO Repository: ome/omero-py 2025-09-13 00:36:38,194 [ scc.merge] INFO Excluded PRs: 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-09-13 00:36:38,194 [ scc.merge] INFO Already up to date. 2025-09-13 00:36:38,194 [ scc.merge] INFO 2025-09-13 00:36:38,194 [ scc.merge] INFO Merged PRs: 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-09-13 00:36:38,194 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-09-13 00:36:38,194 [ scc.merge] INFO 2025-09-13 00:36:38,195 [ scc.merge] INFO Repository: ome/omero-scripts 2025-09-13 00:36:38,195 [ scc.merge] INFO Excluded PRs: 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-09-13 00:36:38,195 [ scc.merge] INFO Already up to date. 2025-09-13 00:36:38,195 [ scc.merge] INFO 2025-09-13 00:36:38,195 [ scc.merge] INFO Merged PRs: 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-09-13 00:36:38,195 [ scc.merge] INFO 2025-09-13 00:36:38,195 [ scc.merge] INFO Conflicting PRs (not included): 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-09-13 00:36:38,195 [ scc.merge] INFO 2025-09-13 00:36:38,195 [ scc.merge] INFO Repository: ome/omero-web 2025-09-13 00:36:38,195 [ scc.merge] INFO Excluded PRs: 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-09-13 00:36:38,195 [ scc.merge] INFO Already up to date. 2025-09-13 00:36:38,195 [ scc.merge] INFO 2025-09-13 00:36:38,195 [ scc.merge] INFO Merged PRs: 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-09-13 00:36:38,195 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2025-09-13 00:36:38,195 [ scc.merge] INFO 2025-09-13 00:36:38,195 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-09-13 00:36:38,195 [ scc.git] DEBUG Calling 'git remote' 2025-09-13 00:36:38,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-09-13 00:36:38,197 [ scc.git] DEBUG Calling 'git remote' 2025-09-13 00:36:38,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:36:38,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-09-13 00:36:38,200 [ scc.git] DEBUG Calling 'git remote' 2025-09-13 00:36:38,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:36:38,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-09-13 00:36:38,202 [ scc.git] DEBUG Calling 'git remote' 2025-09-13 00:36:38,204 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:36:38,204 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-09-13 00:36:38,204 [ scc.git] DEBUG Calling 'git remote' 2025-09-13 00:36:38,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-09-13 00:36:38,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-09-13 00:36:38,207 [ scc.git] DEBUG Calling 'git remote' 2025-09-13 00:36:38,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from edf7ff58 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 03b9116 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 2a7c4d2e3 nothing to commit, working tree clean HEAD detached from 8985140 nothing to commit, working tree clean 2025-09-13 00:37:06,400 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS