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Started by upstream project "Trigger" build number 279
originally caused by:
 Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
 > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
 > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10
 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git
 > git --version # timeout=10
 > git --version # 'git version 2.43.5'
 > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision e849d7220735d67c4a474051cc03805d0a822cde (refs/remotes/origin/master)
Commit message: "Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1"
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f e849d7220735d67c4a474051cc03805d0a822cde # timeout=10
 > git rev-list --no-walk e849d7220735d67c4a474051cc03805d0a822cde # timeout=10
Cleaning workspace
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -fdx # timeout=10
 > git submodule foreach --recursive git reset --hard # timeout=10
 > git submodule foreach --recursive git clean -fdx # timeout=10
 > git remote # timeout=10
 > git submodule init # timeout=10
 > git submodule sync # timeout=10
 > git config --get remote.origin.url # timeout=10
 > git submodule init # timeout=10
 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
 > git config --get submodule.omero-py.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10
 > git config --get submodule.omero-web.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10
 > git config --get submodule.omero-marshal.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10
 > git config --get submodule.omero-dropbox.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10
 > git config --get submodule.omero-scripts.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10
 > git submodule update --init --recursive omero-py # timeout=10
 > git submodule update --init --recursive omero-web # timeout=10
 > git submodule update --init --recursive omero-marshal # timeout=10
 > git submodule update --init --recursive omero-dropbox # timeout=10
 > git submodule update --init --recursive omero-scripts # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 242
[Pipeline] sh
+ pushd build
~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
+ popd
~/workspace/OMERO-python-superbuild-push
+ python3 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
  Using cached pip-24.3.1-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 21.2.3
    Uninstalling pip-21.2.3:
      Successfully uninstalled pip-21.2.3
Successfully installed pip-24.3.1
+ python3 -m pip install scc
Collecting scc
  Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
  Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB)
Collecting PyYAML>=5.1 (from scc)
  Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
  Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
  Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
  Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
  Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
Collecting urllib3<2 (from scc)
  Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
  Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
  Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
  Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
  Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
  Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
  Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB)
Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB)
Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB)
Using cached certifi-2024.8.30-py3-none-any.whl (167 kB)
Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB)
Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB)
Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB)
Using cached idna-3.10-py3-none-any.whl (70 kB)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.14 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-11-14 00:35:17,646 [  scc.config] DEBUG Found github.token
2024-11-14 00:35:17,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-11-14 00:35:17,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:35:18,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:35:18,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-11-14 00:35:18,585 [      scc.gh] DEBUG 4622 remaining from 5000 (Reset at 01:11
2024-11-14 00:35:18,585 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-14 00:35:18,590 [     scc.git] DEBUG Check current status
2024-11-14 00:35:18,590 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-14 00:35:18,594 [     scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-11-14 00:35:18,595 [     scc.git] DEBUG Calling 'git submodule status'
2024-11-14 00:35:18,648 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-11-14 00:35:18,651 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-11-14 00:35:18,655 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-11-14 00:35:18,659 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-11-14 00:35:18,663 [     scc.git] DEBUG  da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-11-14 00:35:18,668 [  scc.config] DEBUG Found remote.origin.url
2024-11-14 00:35:19,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-11-14 00:35:19,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-14 00:35:19,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-14 00:35:20,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-14 00:35:20,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-14 00:35:20,762 [     scc.git] DEBUG Resetting...
2024-11-14 00:35:20,762 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-11-14 00:35:20,769 [     scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-11-14 00:35:20,769 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-11-14 00:35:20,823 [     scc.git] DEBUG Check current status
2024-11-14 00:35:20,824 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-14 00:35:20,828 [     scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1
2024-11-14 00:35:20,828 [     scc.git] DEBUG Calling 'git submodule status'
2024-11-14 00:35:20,869 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-11-14 00:35:20,872 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-11-14 00:35:20,875 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-11-14 00:35:20,879 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-11-14 00:35:20,882 [     scc.git] DEBUG  da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f)
2024-11-14 00:35:20,883 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-11-14 00:35:20,883 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-11-14 00:35:20,883 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-11-14 00:35:20,883 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-11-14 00:35:20,884 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-11-14 00:35:20,884 [    scc.repo] DEBUG ## PRs found:
2024-11-14 00:35:21,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-11-14 00:35:21,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/294 HTTP/1.1" 200 None
2024-11-14 00:35:21,747 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-11-14 00:35:21,747 [    scc.repo] DEBUG   - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`'
2024-11-14 00:35:22,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-11-14 00:35:22,207 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-11-14 00:35:22,208 [    scc.repo] DEBUG   - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-11-14 00:35:22,208 [    scc.repo] DEBUG ## Branches found:
2024-11-14 00:35:22,208 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:22,208 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:22,212 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-14 00:35:22,216 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-14 00:35:22,216 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-14 00:35:22,220 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-14 00:35:22,224 [     scc.git] DEBUG Already up to date.

2024-11-14 00:35:22,224 [     scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-11-14 00:35:22,530 [     scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-11-14 00:35:22,530 [     scc.git] DEBUG  * branch            refs/pull/293/head -> FETCH_HEAD
2024-11-14 00:35:22,535 [     scc.git] DEBUG Calling 'git fetch origin pull/294/head'
2024-11-14 00:35:22,847 [     scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-11-14 00:35:22,848 [     scc.git] DEBUG  * branch            refs/pull/294/head -> FETCH_HEAD
2024-11-14 00:35:22,853 [     scc.git] DEBUG ## Unique users: []
2024-11-14 00:35:22,853 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:22,853 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:22,857 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-11-14 00:35:22,861 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:22,864 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-11-14 00:35:22,876 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:35:22,879 [     scc.git] DEBUG  omero-py | 2 +-
2024-11-14 00:35:22,879 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-11-14 00:35:23,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:35:23,018 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...587bd8c5de8d393fbed353cefde81f5bad4ea13a'
2024-11-14 00:35:23,098 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:23,101 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 294 (Bump omero-web from `da5b7d1` to `213bb61`) 587bd8c5de8d393fbed353cefde81f5bad4ea13a'
2024-11-14 00:35:23,158 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:35:23,160 [     scc.git] DEBUG  omero-web | 2 +-
2024-11-14 00:35:23,160 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-11-14 00:35:23,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:35:23,400 [     scc.git] DEBUG Calling 'git submodule update'
2024-11-14 00:35:23,561 [     scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba'
2024-11-14 00:35:23,771 [     scc.git] DEBUG Submodule path 'omero-web': checked out '213bb61adc23aed4a750f2a83dc94b7efdb22cee'
2024-11-14 00:35:23,772 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:23,772 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:23,776 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-11-14 00:35:24,315 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fab0e4f4f10> has no local changes
2024-11-14 00:35:24,315 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-python-superbuild
Already up to date.

Merged PRs:
  - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
  - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`'

Generated by OMERO-python-superbuild-push#231 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/231/)'
2024-11-14 00:35:24,339 [     scc.git] DEBUG [detached HEAD cb68c6d] merge master -Dorg -Snone
2024-11-14 00:35:24,339 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-11-14 00:35:24,339 [   scc.merge] INFO  Already up to date.
2024-11-14 00:35:24,339 [   scc.merge] INFO  
2024-11-14 00:35:24,339 [   scc.merge] INFO  Merged PRs:
2024-11-14 00:35:24,339 [   scc.merge] INFO    - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-11-14 00:35:24,339 [   scc.merge] INFO    - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`'
2024-11-14 00:35:24,339 [   scc.merge] INFO  
2024-11-14 00:35:24,339 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-11-14 00:35:24,340 [     scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master

submodules:
  omero-scripts:
    base-branch: develop
2024-11-14 00:35:26,669 [  scc.config] DEBUG Found github.token
2024-11-14 00:35:26,672 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-11-14 00:35:26,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:35:27,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:35:27,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-11-14 00:35:27,637 [      scc.gh] DEBUG 4610 remaining from 5000 (Reset at 01:11
2024-11-14 00:35:27,637 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-14 00:35:27,642 [     scc.git] DEBUG Check current status
2024-11-14 00:35:27,642 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-14 00:35:27,646 [     scc.git] DEBUG cb68c6d merge master -Dorg -Snone
2024-11-14 00:35:27,646 [     scc.git] DEBUG Calling 'git submodule status'
2024-11-14 00:35:27,682 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-11-14 00:35:27,684 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-11-14 00:35:27,687 [     scc.git] DEBUG  4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-11-14 00:35:27,691 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-11-14 00:35:27,775 [     scc.git] DEBUG  213bb61adc23aed4a750f2a83dc94b7efdb22cee omero-web (v5.27.2-7-g213bb61ad)
2024-11-14 00:35:27,779 [  scc.config] DEBUG Found remote.origin.url
2024-11-14 00:35:27,779 [     scc.git] DEBUG Reading repository configuration from repositories.yml
2024-11-14 00:35:27,781 [     scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
  omero-scripts:
    base-branch: develop

2024-11-14 00:35:28,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-11-14 00:35:28,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-14 00:35:28,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-14 00:35:29,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-14 00:35:29,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-14 00:35:29,808 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:35:29,857 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-11-14 00:35:29,857 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-14 00:35:29,861 [     scc.git] DEBUG Check current status
2024-11-14 00:35:29,861 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-14 00:35:29,865 [     scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-11-14 00:35:29,866 [     scc.git] DEBUG Calling 'git submodule status'
2024-11-14 00:35:29,910 [  scc.config] DEBUG Found remote.origin.url
2024-11-14 00:35:30,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-11-14 00:35:30,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-14 00:35:31,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-14 00:35:31,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-14 00:35:32,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-14 00:35:32,103 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:35:32,142 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:35:32,143 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-11-14 00:35:32,143 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-14 00:35:32,147 [     scc.git] DEBUG Check current status
2024-11-14 00:35:32,147 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-14 00:35:32,151 [     scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-11-14 00:35:32,151 [     scc.git] DEBUG Calling 'git submodule status'
2024-11-14 00:35:32,191 [  scc.config] DEBUG Found remote.origin.url
2024-11-14 00:35:32,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-11-14 00:35:33,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-14 00:35:33,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-14 00:35:33,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-14 00:35:34,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-14 00:35:34,277 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:35:34,320 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:35:34,321 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-11-14 00:35:34,321 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-14 00:35:34,326 [     scc.git] DEBUG Check current status
2024-11-14 00:35:34,326 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-14 00:35:34,348 [     scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0
2024-11-14 00:35:34,348 [     scc.git] DEBUG Calling 'git submodule status'
2024-11-14 00:35:34,397 [  scc.config] DEBUG Found remote.origin.url
2024-11-14 00:35:34,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-11-14 00:35:35,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-14 00:35:35,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-14 00:35:36,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-14 00:35:36,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-14 00:35:36,432 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:35:36,474 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:35:36,475 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-11-14 00:35:36,475 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-14 00:35:36,479 [     scc.git] DEBUG Check current status
2024-11-14 00:35:36,479 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-14 00:35:36,499 [     scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-11-14 00:35:36,500 [     scc.git] DEBUG Calling 'git submodule status'
2024-11-14 00:35:36,550 [  scc.config] DEBUG Found remote.origin.url
2024-11-14 00:35:36,551 [     scc.git] DEBUG Repository configuration:
base-branch: develop

2024-11-14 00:35:36,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-11-14 00:35:37,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-14 00:35:37,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-14 00:35:38,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-14 00:35:38,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-14 00:35:38,532 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:35:38,574 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:35:38,575 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-11-14 00:35:38,575 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-11-14 00:35:38,579 [     scc.git] DEBUG Check current status
2024-11-14 00:35:38,580 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-14 00:35:38,901 [     scc.git] DEBUG 213bb61ad Merge pull request #580 from sbesson/obj_id_mask_no_match
2024-11-14 00:35:38,901 [     scc.git] DEBUG Calling 'git submodule status'
2024-11-14 00:35:38,945 [  scc.config] DEBUG Found remote.origin.url
2024-11-14 00:35:39,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-11-14 00:35:39,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-11-14 00:35:40,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-11-14 00:35:40,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-11-14 00:35:40,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-11-14 00:35:40,856 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:35:40,900 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:35:40,901 [     scc.git] DEBUG Resetting...
2024-11-14 00:35:40,901 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-11-14 00:35:40,907 [     scc.git] DEBUG HEAD is now at cb68c6d merge master -Dorg -Snone
2024-11-14 00:35:40,908 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-11-14 00:35:40,967 [     scc.git] DEBUG Check current status
2024-11-14 00:35:40,967 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-11-14 00:35:40,972 [     scc.git] DEBUG cb68c6d merge master -Dorg -Snone
2024-11-14 00:35:40,972 [     scc.git] DEBUG Calling 'git submodule status'
2024-11-14 00:35:41,015 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-11-14 00:35:41,019 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-11-14 00:35:41,023 [     scc.git] DEBUG  4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa)
2024-11-14 00:35:41,027 [     scc.git] DEBUG  312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe)
2024-11-14 00:35:41,030 [     scc.git] DEBUG  213bb61adc23aed4a750f2a83dc94b7efdb22cee omero-web (v5.27.2-7-g213bb61ad)
2024-11-14 00:35:41,031 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-11-14 00:35:41,032 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-11-14 00:35:41,032 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-11-14 00:35:41,032 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-11-14 00:35:41,032 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-11-14 00:35:41,032 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-11-14 00:35:41,032 [    scc.repo] DEBUG ## PRs found:
2024-11-14 00:35:41,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2024-11-14 00:35:41,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/294 HTTP/1.1" 200 None
2024-11-14 00:35:41,828 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-11-14 00:35:42,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/587bd8c5de8d393fbed353cefde81f5bad4ea13a HTTP/1.1" 200 None
2024-11-14 00:35:42,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/587bd8c5de8d393fbed353cefde81f5bad4ea13a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:35:43,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/587bd8c5de8d393fbed353cefde81f5bad4ea13a HTTP/1.1" 200 None
2024-11-14 00:35:43,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/587bd8c5de8d393fbed353cefde81f5bad4ea13a?per_page=1 HTTP/1.1" 200 2
2024-11-14 00:35:43,893 [    scc.repo] DEBUG   - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`'
2024-11-14 00:35:44,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None
2024-11-14 00:35:44,351 [    scc.repo] DEBUG   # ... Include label: dependencies
2024-11-14 00:35:44,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-11-14 00:35:45,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:35:45,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None
2024-11-14 00:35:46,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2
2024-11-14 00:35:46,166 [    scc.repo] DEBUG   - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-11-14 00:35:46,166 [    scc.repo] DEBUG ## Branches found:
2024-11-14 00:35:46,166 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:46,166 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:46,171 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-14 00:35:46,175 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-14 00:35:46,175 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-14 00:35:46,179 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-14 00:35:46,183 [     scc.git] DEBUG Already up to date.

2024-11-14 00:35:46,183 [     scc.git] DEBUG Calling 'git fetch origin pull/293/head'
2024-11-14 00:35:46,520 [     scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-11-14 00:35:46,520 [     scc.git] DEBUG  * branch            refs/pull/293/head -> FETCH_HEAD
2024-11-14 00:35:46,526 [     scc.git] DEBUG Calling 'git fetch origin pull/294/head'
2024-11-14 00:35:46,813 [     scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2024-11-14 00:35:46,814 [     scc.git] DEBUG  * branch            refs/pull/294/head -> FETCH_HEAD
2024-11-14 00:35:46,819 [     scc.git] DEBUG ## Unique users: []
2024-11-14 00:35:46,819 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:46,819 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:46,823 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9'
2024-11-14 00:35:46,828 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:46,831 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9'
2024-11-14 00:35:46,835 [     scc.git] DEBUG Already up to date.
2024-11-14 00:35:46,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:35:46,974 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...587bd8c5de8d393fbed353cefde81f5bad4ea13a'
2024-11-14 00:35:46,979 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:46,983 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 294 (Bump omero-web from `da5b7d1` to `213bb61`) 587bd8c5de8d393fbed353cefde81f5bad4ea13a'
2024-11-14 00:35:46,988 [     scc.git] DEBUG Already up to date.
2024-11-14 00:35:47,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:35:47,353 [     scc.git] DEBUG Calling 'git submodule update'
2024-11-14 00:35:47,395 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:47,395 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:47,400 [    scc.repo] DEBUG ## PRs found:
2024-11-14 00:35:47,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-11-14 00:35:48,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-11-14 00:35:48,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-11-14 00:35:49,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-11-14 00:35:49,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:35:50,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-11-14 00:35:50,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-11-14 00:35:50,669 [    scc.repo] DEBUG   - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-11-14 00:35:50,669 [    scc.repo] DEBUG ## Branches found:
2024-11-14 00:35:50,669 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-11-14 00:35:50,669 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:50,669 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:50,674 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-14 00:35:50,678 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-14 00:35:50,679 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-14 00:35:50,683 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-14 00:35:50,688 [     scc.git] DEBUG Already up to date.

2024-11-14 00:35:50,688 [     scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-11-14 00:35:51,079 [     scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-11-14 00:35:51,079 [     scc.git] DEBUG  * branch            refs/pull/16/head -> FETCH_HEAD
2024-11-14 00:35:51,083 [     scc.git] DEBUG ## Unique users: []
2024-11-14 00:35:51,084 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:51,084 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:51,089 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-11-14 00:35:51,094 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:51,098 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-11-14 00:35:51,370 [     scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-11-14 00:35:51,371 [     scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-11-14 00:35:51,371 [     scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-11-14 00:35:51,371 [     scc.git] DEBUG Auto-merging src/fsLists.py
2024-11-14 00:35:51,371 [     scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-11-14 00:35:51,371 [     scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-11-14 00:35:51,371 [     scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-11-14 00:35:51,371 [     scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-11-14 00:35:51,371 [     scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-11-14 00:35:51,372 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:35:51,376 [     scc.git] DEBUG  src/fsAbstractPlatformMonitor.py |  6 +++---
2024-11-14 00:35:51,376 [     scc.git] DEBUG  src/fsDirectory.py               | 46 ++++++++++++++++++++--------------------
2024-11-14 00:35:51,376 [     scc.git] DEBUG  src/fsDropBox.py                 | 24 ++++++++++-----------
2024-11-14 00:35:51,376 [     scc.git] DEBUG  src/fsLists.py                   | 14 ++++++------
2024-11-14 00:35:51,376 [     scc.git] DEBUG  src/fsMac-10-5-Monitor.py        | 10 ++++-----
2024-11-14 00:35:51,376 [     scc.git] DEBUG  src/fsMonitor.py                 | 24 ++++++++++-----------
2024-11-14 00:35:51,376 [     scc.git] DEBUG  src/fsMonitorServer.py           | 10 ++++-----
2024-11-14 00:35:51,376 [     scc.git] DEBUG  src/fsPyinotifyMonitor.py        |  8 +++----
2024-11-14 00:35:51,376 [     scc.git] DEBUG  src/fsWin-XP-Monitor.py          | 20 ++++++++---------
2024-11-14 00:35:51,378 [     scc.git] DEBUG  9 files changed, 81 insertions(+), 81 deletions(-)
2024-11-14 00:35:51,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:35:51,528 [     scc.git] DEBUG Calling 'git submodule update'
2024-11-14 00:35:51,570 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:51,570 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:51,574 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:35:51,612 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-11-14 00:35:51,618 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f2135f65f40> has no local changes
2024-11-14 00:35:51,619 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Generated by OMERO-python-superbuild-push#231 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/231/)'
2024-11-14 00:35:51,627 [     scc.git] DEBUG [detached HEAD b9b6eb8] merge master -Dorg -Ssuccess-only
2024-11-14 00:35:51,627 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:35:51,627 [    scc.repo] DEBUG ## PRs found:
2024-11-14 00:35:52,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-11-14 00:35:52,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-11-14 00:35:53,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-11-14 00:35:53,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-11-14 00:35:54,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:35:54,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-11-14 00:35:55,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-11-14 00:35:55,033 [    scc.repo] DEBUG   - PR 69 will-moore 'Roi encoder allows Shape None'
2024-11-14 00:35:55,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-11-14 00:35:56,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-11-14 00:35:56,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-11-14 00:35:56,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-11-14 00:35:56,942 [    scc.repo] DEBUG ## Branches found:
2024-11-14 00:35:56,942 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-11-14 00:35:56,943 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:56,943 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:56,948 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-14 00:35:56,952 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-14 00:35:56,952 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-14 00:35:56,956 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-14 00:35:56,962 [     scc.git] DEBUG Already up to date.

2024-11-14 00:35:56,962 [     scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-11-14 00:35:57,280 [     scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-11-14 00:35:57,281 [     scc.git] DEBUG  * branch            refs/pull/69/head -> FETCH_HEAD
2024-11-14 00:35:57,285 [     scc.git] DEBUG ## Unique users: []
2024-11-14 00:35:57,285 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:57,285 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:57,291 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-11-14 00:35:57,296 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:57,301 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-11-14 00:35:57,315 [     scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-11-14 00:35:57,316 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:35:57,319 [     scc.git] DEBUG  omero_marshal/encode/encoders/roi.py | 5 +++--
2024-11-14 00:35:57,319 [     scc.git] DEBUG  tests/unit/conftest.py               | 5 ++++-
2024-11-14 00:35:57,319 [     scc.git] DEBUG  2 files changed, 7 insertions(+), 3 deletions(-)
2024-11-14 00:35:57,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:35:57,456 [     scc.git] DEBUG Calling 'git submodule update'
2024-11-14 00:35:57,496 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:35:57,496 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:35:57,501 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:35:57,539 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-11-14 00:35:57,546 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f2136482cd0> has no local changes
2024-11-14 00:35:57,547 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Generated by OMERO-python-superbuild-push#231 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/231/)'
2024-11-14 00:35:57,556 [     scc.git] DEBUG [detached HEAD 586fc0e] merge master -Dorg -Ssuccess-only
2024-11-14 00:35:57,557 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:35:57,557 [    scc.repo] DEBUG ## PRs found:
2024-11-14 00:35:58,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-11-14 00:35:58,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None
2024-11-14 00:35:59,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-11-14 00:35:59,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:00,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:36:00,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-11-14 00:36:00,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:01,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None
2024-11-14 00:36:01,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None
2024-11-14 00:36:01,824 [    scc.repo] DEBUG   - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-11-14 00:36:02,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None
2024-11-14 00:36:02,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None
2024-11-14 00:36:03,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None
2024-11-14 00:36:03,276 [    scc.repo] DEBUG   # ... Include label: include
2024-11-14 00:36:03,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-11-14 00:36:04,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:04,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:36:05,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-11-14 00:36:05,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:05,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None
2024-11-14 00:36:06,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None
2024-11-14 00:36:06,380 [    scc.repo] DEBUG   - PR 427 Rdornier 'Add fileset folder creation'
2024-11-14 00:36:06,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-11-14 00:36:07,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-11-14 00:36:07,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-11-14 00:36:08,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:08,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:36:09,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-11-14 00:36:09,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:10,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-11-14 00:36:10,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-11-14 00:36:10,543 [    scc.repo] DEBUG   - PR 408 jburel 'remove deprecated method'
2024-11-14 00:36:11,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-11-14 00:36:11,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-11-14 00:36:11,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-11-14 00:36:12,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:12,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:36:13,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-11-14 00:36:13,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-11-14 00:36:14,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:14,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:36:15,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-11-14 00:36:15,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:16,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-11-14 00:36:16,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-11-14 00:36:16,577 [    scc.repo] DEBUG   - PR 391 joshmoore 'Add jstack command'
2024-11-14 00:36:17,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-11-14 00:36:17,020 [    scc.repo] DEBUG   # ... Exclude label: exclude
2024-11-14 00:36:17,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-11-14 00:36:17,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-11-14 00:36:18,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-11-14 00:36:18,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:19,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-11-14 00:36:19,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-11-14 00:36:19,770 [    scc.repo] DEBUG   - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-11-14 00:36:20,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-11-14 00:36:20,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-11-14 00:36:21,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-11-14 00:36:21,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:22,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:36:22,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-11-14 00:36:23,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:23,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-11-14 00:36:23,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-11-14 00:36:23,945 [    scc.repo] DEBUG   - PR 332 jburel 'Build conda'
2024-11-14 00:36:24,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-11-14 00:36:24,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-11-14 00:36:25,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-11-14 00:36:25,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-11-14 00:36:26,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-11-14 00:36:26,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:27,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-11-14 00:36:27,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-11-14 00:36:27,710 [    scc.repo] DEBUG   - PR 299 joshmoore 'Add parents and children to omero obj'
2024-11-14 00:36:28,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-11-14 00:36:28,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-11-14 00:36:29,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:29,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-11-14 00:36:29,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-11-14 00:36:29,977 [    scc.repo] DEBUG   - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-11-14 00:36:30,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-11-14 00:36:30,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-11-14 00:36:31,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-11-14 00:36:31,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:32,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-11-14 00:36:32,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-11-14 00:36:32,865 [    scc.repo] DEBUG   - PR 207 manics 'BlitzGateway.connect raise on error'
2024-11-14 00:36:33,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-11-14 00:36:33,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-11-14 00:36:34,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-11-14 00:36:34,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:35,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-11-14 00:36:35,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-11-14 00:36:35,596 [    scc.repo] DEBUG   - PR 199 joshmoore 'user: allow setting default group'
2024-11-14 00:36:36,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-11-14 00:36:36,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-11-14 00:36:37,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-11-14 00:36:37,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-11-14 00:36:37,551 [    scc.repo] DEBUG ## Branches found:
2024-11-14 00:36:37,551 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-11-14 00:36:37,551 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:36:37,551 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:37,557 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-14 00:36:37,564 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-14 00:36:37,564 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-14 00:36:37,572 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-14 00:36:37,576 [     scc.git] DEBUG Already up to date.

2024-11-14 00:36:37,577 [     scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-11-14 00:36:39,854 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-14 00:36:39,854 [     scc.git] DEBUG  * branch              refs/pull/199/head -> FETCH_HEAD
2024-11-14 00:36:39,859 [     scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-11-14 00:36:40,172 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-14 00:36:40,173 [     scc.git] DEBUG  * branch              refs/pull/207/head -> FETCH_HEAD
2024-11-14 00:36:40,178 [     scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-11-14 00:36:40,613 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-14 00:36:40,614 [     scc.git] DEBUG  * branch              refs/pull/266/head -> FETCH_HEAD
2024-11-14 00:36:40,619 [     scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-11-14 00:36:40,918 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-14 00:36:40,918 [     scc.git] DEBUG  * branch              refs/pull/299/head -> FETCH_HEAD
2024-11-14 00:36:40,923 [     scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-11-14 00:36:41,332 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-14 00:36:41,332 [     scc.git] DEBUG  * branch              refs/pull/332/head -> FETCH_HEAD
2024-11-14 00:36:41,337 [     scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-11-14 00:36:41,641 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-14 00:36:41,641 [     scc.git] DEBUG  * branch              refs/pull/337/head -> FETCH_HEAD
2024-11-14 00:36:41,648 [     scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-11-14 00:36:41,927 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-14 00:36:41,927 [     scc.git] DEBUG  * branch              refs/pull/391/head -> FETCH_HEAD
2024-11-14 00:36:41,933 [     scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-11-14 00:36:42,275 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-14 00:36:42,275 [     scc.git] DEBUG  * branch              refs/pull/408/head -> FETCH_HEAD
2024-11-14 00:36:42,280 [     scc.git] DEBUG Calling 'git fetch origin pull/427/head'
2024-11-14 00:36:43,130 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-14 00:36:43,131 [     scc.git] DEBUG  * branch              refs/pull/427/head -> FETCH_HEAD
2024-11-14 00:36:43,136 [     scc.git] DEBUG Calling 'git fetch origin pull/431/head'
2024-11-14 00:36:43,579 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-11-14 00:36:43,579 [     scc.git] DEBUG  * branch              refs/pull/431/head -> FETCH_HEAD
2024-11-14 00:36:43,585 [     scc.git] DEBUG ## Unique users: []
2024-11-14 00:36:43,585 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:36:43,585 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:43,591 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-11-14 00:36:43,604 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:43,610 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-11-14 00:36:43,808 [     scc.git] DEBUG Auto-merging src/omero/cli.py
2024-11-14 00:36:43,808 [     scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-11-14 00:36:43,809 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:36:43,813 [     scc.git] DEBUG  src/omero/cli.py          |  6 ++++++
2024-11-14 00:36:43,813 [     scc.git] DEBUG  src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-11-14 00:36:43,813 [     scc.git] DEBUG  2 files changed, 39 insertions(+), 3 deletions(-)
2024-11-14 00:36:43,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:36:43,955 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-11-14 00:36:43,968 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:43,973 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-11-14 00:36:44,657 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-11-14 00:36:44,658 [     scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-11-14 00:36:44,658 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:36:44,666 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-11-14 00:36:44,666 [     scc.git] DEBUG  test/unit/test_gateway.py     | 16 ++++++++++++++++
2024-11-14 00:36:44,667 [     scc.git] DEBUG  2 files changed, 29 insertions(+), 6 deletions(-)
2024-11-14 00:36:44,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:36:44,807 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-11-14 00:36:44,819 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:44,823 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-11-14 00:36:44,875 [     scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-11-14 00:36:44,876 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:36:44,879 [     scc.git] DEBUG  src/omero/plugins/search.py | 13 +++++++++----
2024-11-14 00:36:44,879 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 4 deletions(-)
2024-11-14 00:36:45,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:36:45,195 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-11-14 00:36:45,208 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:45,214 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-11-14 00:36:45,359 [     scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-11-14 00:36:45,359 [     scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-11-14 00:36:45,360 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:36:45,364 [     scc.git] DEBUG  src/omero/plugins/obj.py      | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-11-14 00:36:45,364 [     scc.git] DEBUG  test/unit/clitest/test_obj.py |  2 +-
2024-11-14 00:36:45,364 [     scc.git] DEBUG  2 files changed, 69 insertions(+), 2 deletions(-)
2024-11-14 00:36:45,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:36:45,589 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-11-14 00:36:45,600 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:45,605 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-11-14 00:36:45,638 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:36:45,640 [     scc.git] DEBUG  .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-11-14 00:36:45,641 [     scc.git] DEBUG  connect.py                    | 11 +++++++++++
2024-11-14 00:36:45,641 [     scc.git] DEBUG  2 files changed, 48 insertions(+)
2024-11-14 00:36:45,641 [     scc.git] DEBUG  create mode 100644 .github/workflows/install.yml
2024-11-14 00:36:45,641 [     scc.git] DEBUG  create mode 100644 connect.py
2024-11-14 00:36:45,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:36:45,985 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-11-14 00:36:45,997 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:46,001 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-11-14 00:36:46,052 [     scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-11-14 00:36:46,052 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:36:46,056 [     scc.git] DEBUG  src/omero/plugins/import.py | 2 ++
2024-11-14 00:36:46,056 [     scc.git] DEBUG  1 file changed, 2 insertions(+)
2024-11-14 00:36:46,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:36:46,384 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-11-14 00:36:46,397 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:46,403 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-11-14 00:36:46,663 [     scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-11-14 00:36:46,664 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:36:46,668 [     scc.git] DEBUG  src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-11-14 00:36:46,668 [     scc.git] DEBUG  1 file changed, 59 insertions(+), 2 deletions(-)
2024-11-14 00:36:46,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:36:46,798 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-11-14 00:36:46,811 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:46,817 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-11-14 00:36:46,971 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-11-14 00:36:46,972 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:36:46,980 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 36 ------------------------------------
2024-11-14 00:36:46,980 [     scc.git] DEBUG  1 file changed, 36 deletions(-)
2024-11-14 00:36:47,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:36:47,179 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-11-14 00:36:47,192 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:47,198 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1'
2024-11-14 00:36:47,299 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:36:47,302 [     scc.git] DEBUG  .gitignore                    |  1 +
2024-11-14 00:36:47,302 [     scc.git] DEBUG  src/omero/plugins/download.py | 17 ++++++++++++-----
2024-11-14 00:36:47,302 [     scc.git] DEBUG  2 files changed, 13 insertions(+), 5 deletions(-)
2024-11-14 00:36:47,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:36:47,557 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953'
2024-11-14 00:36:47,571 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:47,576 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953'
2024-11-14 00:36:47,596 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:36:47,599 [     scc.git] DEBUG  src/omero/hdfstorageV2.py | 1 +
2024-11-14 00:36:47,599 [     scc.git] DEBUG  1 file changed, 1 insertion(+)
2024-11-14 00:36:47,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:36:47,936 [     scc.git] DEBUG Calling 'git submodule update'
2024-11-14 00:36:47,981 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:36:47,981 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:47,986 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:36:48,026 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-11-14 00:36:48,034 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f2134f1aeb0> has no local changes
2024-11-14 00:36:48,034 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-py
Excluded PRs:
  - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'
  - PR 427 Rdornier 'Add fileset folder creation'
  - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'

Generated by OMERO-python-superbuild-push#231 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/231/)'
2024-11-14 00:36:48,044 [     scc.git] DEBUG [detached HEAD f09fcf21] merge master -Dorg -Ssuccess-only
2024-11-14 00:36:48,044 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:36:48,044 [     scc.git] INFO  Overriding base-branch from master to develop
2024-11-14 00:36:48,044 [    scc.repo] DEBUG ## PRs found:
2024-11-14 00:36:48,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-11-14 00:36:48,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-11-14 00:36:49,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-11-14 00:36:49,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-11-14 00:36:50,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:50,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:36:51,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-11-14 00:36:51,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-11-14 00:36:51,854 [    scc.repo] DEBUG   - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-11-14 00:36:52,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-11-14 00:36:52,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-11-14 00:36:53,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None
2024-11-14 00:36:53,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-11-14 00:36:54,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-11-14 00:36:54,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-11-14 00:36:55,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-11-14 00:36:55,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-11-14 00:36:56,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:36:56,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-11-14 00:36:57,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-11-14 00:36:57,159 [    scc.repo] DEBUG   - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-11-14 00:36:57,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-11-14 00:36:58,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-11-14 00:36:58,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-11-14 00:36:59,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-11-14 00:36:59,071 [    scc.repo] DEBUG ## Branches found:
2024-11-14 00:36:59,072 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-11-14 00:36:59,072 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:36:59,072 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:36:59,077 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-11-14 00:36:59,082 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-14 00:36:59,082 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-11-14 00:36:59,087 [     scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-11-14 00:36:59,093 [     scc.git] DEBUG Already up to date.

2024-11-14 00:36:59,093 [     scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-11-14 00:36:59,780 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-11-14 00:36:59,780 [     scc.git] DEBUG  * branch            refs/pull/202/head -> FETCH_HEAD
2024-11-14 00:36:59,786 [     scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-11-14 00:37:00,283 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-11-14 00:37:00,283 [     scc.git] DEBUG  * branch            refs/pull/223/head -> FETCH_HEAD
2024-11-14 00:37:00,288 [     scc.git] DEBUG ## Unique users: []
2024-11-14 00:37:00,288 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:37:00,288 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:00,293 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-14 00:37:00,300 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:00,305 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-14 00:37:00,479 [     scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-11-14 00:37:00,479 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-11-14 00:37:00,480 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-11-14 00:37:00,480 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-11-14 00:37:00,486 [     scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-11-14 00:37:00,492 [     scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-11-14 00:37:00,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:00,630 [     scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-11-14 00:37:00,637 [     scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-11-14 00:37:00,641 [     scc.git] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#231](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/231/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/231/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero/annotation_scripts/KeyVal_to_csv.py

--conflicts

2024-11-14 00:37:00,645 [  scc.config] DEBUG Found github.token
2024-11-14 00:37:00,645 [     scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-11-14 00:37:00,645 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-11-14 00:37:00,650 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:00,655 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-11-14 00:37:00,722 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:37:00,725 [     scc.git] DEBUG  omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-11-14 00:37:00,725 [     scc.git] DEBUG  1 file changed, 8 insertions(+), 1 deletion(-)
2024-11-14 00:37:01,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:01,022 [     scc.git] DEBUG Calling 'git submodule update'
2024-11-14 00:37:01,065 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:37:01,065 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:01,071 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:37:01,110 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-11-14 00:37:01,117 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f2134ecc640> has no local changes
2024-11-14 00:37:01,117 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Merged PRs:
  - PR 223 will-moore 'don't attempt ROI stats on big images'

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-python-superbuild-push#231 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/231/)'
2024-11-14 00:37:01,125 [     scc.git] DEBUG [detached HEAD b96115b] merge master -Dorg -Ssuccess-only
2024-11-14 00:37:01,126 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:37:01,126 [    scc.repo] DEBUG ## PRs found:
2024-11-14 00:37:01,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-11-14 00:37:02,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None
2024-11-14 00:37:02,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None
2024-11-14 00:37:03,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2024-11-14 00:37:03,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:04,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:37:04,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2024-11-14 00:37:04,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:05,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None
2024-11-14 00:37:05,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None
2024-11-14 00:37:05,851 [    scc.repo] DEBUG   - PR 596 sukunis 'Linkify can parse anchor tag'
2024-11-14 00:37:06,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None
2024-11-14 00:37:06,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None
2024-11-14 00:37:07,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2024-11-14 00:37:07,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:08,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:37:08,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2024-11-14 00:37:09,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:09,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None
2024-11-14 00:37:10,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None
2024-11-14 00:37:10,006 [    scc.repo] DEBUG   - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2024-11-14 00:37:10,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/594 HTTP/1.1" 200 None
2024-11-14 00:37:11,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6 HTTP/1.1" 200 None
2024-11-14 00:37:11,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:11,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:37:12,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6 HTTP/1.1" 200 None
2024-11-14 00:37:12,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6bba7f773bb6c4217607439f9adab8814bcd0ac6?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:13,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6 HTTP/1.1" 200 None
2024-11-14 00:37:13,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6/status HTTP/1.1" 200 None
2024-11-14 00:37:13,697 [    scc.repo] DEBUG   - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size'
2024-11-14 00:37:14,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/592 HTTP/1.1" 200 None
2024-11-14 00:37:14,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c HTTP/1.1" 200 None
2024-11-14 00:37:15,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:15,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:37:16,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c HTTP/1.1" 200 None
2024-11-14 00:37:16,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/721002a9ad481311a44d093e26641344492e149c?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:16,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c HTTP/1.1" 200 None
2024-11-14 00:37:17,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c/status HTTP/1.1" 200 None
2024-11-14 00:37:17,416 [    scc.repo] DEBUG   - PR 592 jburel 'Replace pkg_resources'
2024-11-14 00:37:17,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/591 HTTP/1.1" 200 None
2024-11-14 00:37:18,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe HTTP/1.1" 200 None
2024-11-14 00:37:18,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:19,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:37:20,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe HTTP/1.1" 200 None
2024-11-14 00:37:20,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8a54f0347e7174a744c4c210d0734effd029acbe?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:21,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe HTTP/1.1" 200 None
2024-11-14 00:37:21,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe/status HTTP/1.1" 200 None
2024-11-14 00:37:21,729 [    scc.repo] DEBUG   - PR 591 jburel 'Action update'
2024-11-14 00:37:22,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/590 HTTP/1.1" 200 None
2024-11-14 00:37:22,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6cbcfa80ce4970cc57fddb99d1be440491982763 HTTP/1.1" 200 None
2024-11-14 00:37:23,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6cbcfa80ce4970cc57fddb99d1be440491982763/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:23,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6cbcfa80ce4970cc57fddb99d1be440491982763/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:37:24,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6cbcfa80ce4970cc57fddb99d1be440491982763 HTTP/1.1" 200 None
2024-11-14 00:37:24,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6cbcfa80ce4970cc57fddb99d1be440491982763?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:24,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6cbcfa80ce4970cc57fddb99d1be440491982763 HTTP/1.1" 200 None
2024-11-14 00:37:25,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6cbcfa80ce4970cc57fddb99d1be440491982763/status HTTP/1.1" 200 None
2024-11-14 00:37:25,411 [    scc.repo] DEBUG   - PR 590 knabar 'Update changelog'
2024-11-14 00:37:25,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None
2024-11-14 00:37:26,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None
2024-11-14 00:37:26,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583/comments HTTP/1.1" 200 None
2024-11-14 00:37:27,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None
2024-11-14 00:37:27,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:28,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:37:28,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None
2024-11-14 00:37:29,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/dd2879608e047a7d71a648a23e6955ce591950fd?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:29,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None
2024-11-14 00:37:30,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/status HTTP/1.1" 200 None
2024-11-14 00:37:30,274 [    scc.repo] DEBUG   - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group'
2024-11-14 00:37:30,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None
2024-11-14 00:37:31,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None
2024-11-14 00:37:31,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-11-14 00:37:32,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-11-14 00:37:32,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-11-14 00:37:33,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-11-14 00:37:33,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-11-14 00:37:34,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:34,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:37:35,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-11-14 00:37:35,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:35,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-11-14 00:37:36,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-11-14 00:37:36,297 [    scc.repo] DEBUG   - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-11-14 00:37:36,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-11-14 00:37:37,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-11-14 00:37:37,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-11-14 00:37:38,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:38,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:37:39,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-11-14 00:37:39,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:40,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-11-14 00:37:40,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-11-14 00:37:40,525 [    scc.repo] DEBUG   - PR 527 will-moore 'Add some initial CSP settings to test'
2024-11-14 00:37:40,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-11-14 00:37:41,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-11-14 00:37:41,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-11-14 00:37:42,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-11-14 00:37:42,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-11-14 00:37:42,881 [    scc.repo] DEBUG ## Branches found:
2024-11-14 00:37:42,881 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-11-14 00:37:42,881 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:37:42,881 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:42,886 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-11-14 00:37:42,891 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-11-14 00:37:42,891 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-11-14 00:37:42,896 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-11-14 00:37:42,901 [     scc.git] DEBUG Already up to date.

2024-11-14 00:37:42,901 [     scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-11-14 00:37:44,593 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-14 00:37:44,593 [     scc.git] DEBUG  * branch                refs/pull/527/head -> FETCH_HEAD
2024-11-14 00:37:44,598 [     scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-11-14 00:37:44,963 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-14 00:37:44,963 [     scc.git] DEBUG  * branch                refs/pull/534/head -> FETCH_HEAD
2024-11-14 00:37:44,968 [     scc.git] DEBUG Calling 'git fetch origin pull/583/head'
2024-11-14 00:37:46,030 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-14 00:37:46,030 [     scc.git] DEBUG  * branch                refs/pull/583/head -> FETCH_HEAD
2024-11-14 00:37:46,035 [     scc.git] DEBUG Calling 'git fetch origin pull/590/head'
2024-11-14 00:37:46,457 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-14 00:37:46,457 [     scc.git] DEBUG  * branch                refs/pull/590/head -> FETCH_HEAD
2024-11-14 00:37:46,462 [     scc.git] DEBUG Calling 'git fetch origin pull/591/head'
2024-11-14 00:37:47,106 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-14 00:37:47,106 [     scc.git] DEBUG  * branch                refs/pull/591/head -> FETCH_HEAD
2024-11-14 00:37:47,111 [     scc.git] DEBUG Calling 'git fetch origin pull/592/head'
2024-11-14 00:37:47,467 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-14 00:37:47,467 [     scc.git] DEBUG  * branch                refs/pull/592/head -> FETCH_HEAD
2024-11-14 00:37:47,472 [     scc.git] DEBUG Calling 'git fetch origin pull/594/head'
2024-11-14 00:37:47,876 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-14 00:37:47,876 [     scc.git] DEBUG  * branch                refs/pull/594/head -> FETCH_HEAD
2024-11-14 00:37:47,882 [     scc.git] DEBUG Calling 'git fetch origin pull/595/head'
2024-11-14 00:37:48,312 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-14 00:37:48,313 [     scc.git] DEBUG  * branch                refs/pull/595/head -> FETCH_HEAD
2024-11-14 00:37:48,318 [     scc.git] DEBUG Calling 'git fetch origin pull/596/head'
2024-11-14 00:37:48,645 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-11-14 00:37:48,646 [     scc.git] DEBUG  * branch                refs/pull/596/head -> FETCH_HEAD
2024-11-14 00:37:48,650 [     scc.git] DEBUG ## Unique users: []
2024-11-14 00:37:48,651 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:37:48,651 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:48,655 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-11-14 00:37:48,664 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:48,669 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-11-14 00:37:48,845 [     scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-11-14 00:37:48,845 [     scc.git] DEBUG Auto-merging setup.py
2024-11-14 00:37:48,846 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:37:48,850 [     scc.git] DEBUG  omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-11-14 00:37:48,850 [     scc.git] DEBUG  setup.py             |  1 +
2024-11-14 00:37:48,850 [     scc.git] DEBUG  2 files changed, 42 insertions(+), 1 deletion(-)
2024-11-14 00:37:48,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:48,985 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-11-14 00:37:48,994 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:48,999 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-11-14 00:37:49,147 [     scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-11-14 00:37:49,147 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-11-14 00:37:49,148 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:37:49,152 [     scc.git] DEBUG  omeroweb/webclient/webclient_gateway.py | 2 +-
2024-11-14 00:37:49,153 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py          | 4 ++--
2024-11-14 00:37:49,153 [     scc.git] DEBUG  2 files changed, 3 insertions(+), 3 deletions(-)
2024-11-14 00:37:49,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:49,372 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...dd2879608e047a7d71a648a23e6955ce591950fd'
2024-11-14 00:37:49,381 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:49,386 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to quick-switch to that group) dd2879608e047a7d71a648a23e6955ce591950fd'
2024-11-14 00:37:49,614 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:37:49,618 [     scc.git] DEBUG  .../templates/webclient/base/includes/group_user_content.html     | 8 ++++++--
2024-11-14 00:37:49,618 [     scc.git] DEBUG  .../templates/webclient/base/includes/group_user_dropdown2.html   | 2 --
2024-11-14 00:37:49,618 [     scc.git] DEBUG  2 files changed, 6 insertions(+), 4 deletions(-)
2024-11-14 00:37:49,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:49,753 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...6cbcfa80ce4970cc57fddb99d1be440491982763'
2024-11-14 00:37:49,761 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:49,767 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 590 (Update changelog) 6cbcfa80ce4970cc57fddb99d1be440491982763'
2024-11-14 00:37:49,825 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:37:49,828 [     scc.git] DEBUG  CHANGELOG.md | 16 ++++++++++++++++
2024-11-14 00:37:49,828 [     scc.git] DEBUG  1 file changed, 16 insertions(+)
2024-11-14 00:37:50,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:50,140 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...8a54f0347e7174a744c4c210d0734effd029acbe'
2024-11-14 00:37:50,150 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:50,156 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 591 (Action update) 8a54f0347e7174a744c4c210d0734effd029acbe'
2024-11-14 00:37:50,389 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:37:50,393 [     scc.git] DEBUG  .github/workflows/codeql-analysis.yml | 2 +-
2024-11-14 00:37:50,393 [     scc.git] DEBUG  .github/workflows/install.yml         | 4 ++--
2024-11-14 00:37:50,393 [     scc.git] DEBUG  .github/workflows/publish_pypi.yml    | 6 +++---
2024-11-14 00:37:50,393 [     scc.git] DEBUG  .github/workflows/tox.yml             | 4 ++--
2024-11-14 00:37:50,393 [     scc.git] DEBUG  .gitignore                            | 1 +
2024-11-14 00:37:50,393 [     scc.git] DEBUG  5 files changed, 9 insertions(+), 8 deletions(-)
2024-11-14 00:37:50,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:50,528 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...721002a9ad481311a44d093e26641344492e149c'
2024-11-14 00:37:50,536 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:50,541 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Replace pkg_resources) 721002a9ad481311a44d093e26641344492e149c'
2024-11-14 00:37:50,681 [     scc.git] DEBUG Auto-merging setup.py
2024-11-14 00:37:50,682 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:37:50,685 [     scc.git] DEBUG  omero/plugins/web.py | 6 +++---
2024-11-14 00:37:50,685 [     scc.git] DEBUG  setup.py             | 3 ++-
2024-11-14 00:37:50,685 [     scc.git] DEBUG  2 files changed, 5 insertions(+), 4 deletions(-)
2024-11-14 00:37:50,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:50,915 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...6bba7f773bb6c4217607439f9adab8814bcd0ac6'
2024-11-14 00:37:50,924 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:50,929 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 594 (Add minimum batch size to avoid infinite loop due to zero batch size) 6bba7f773bb6c4217607439f9adab8814bcd0ac6'
2024-11-14 00:37:51,035 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:37:51,038 [     scc.git] DEBUG  omeroweb/webclient/templates/webclient/annotations/omero_table.html | 5 +++--
2024-11-14 00:37:51,038 [     scc.git] DEBUG  1 file changed, 3 insertions(+), 2 deletions(-)
2024-11-14 00:37:51,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:51,330 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb'
2024-11-14 00:37:51,339 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:51,345 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb'
2024-11-14 00:37:51,459 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:37:51,463 [     scc.git] DEBUG  omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +-
2024-11-14 00:37:51,463 [     scc.git] DEBUG  1 file changed, 1 insertion(+), 1 deletion(-)
2024-11-14 00:37:51,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:51,709 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8'
2024-11-14 00:37:51,719 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:51,725 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8'
2024-11-14 00:37:51,777 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-11-14 00:37:51,781 [     scc.git] DEBUG  .../webclient/javascript/ome.webclient.actions.js  | 26 ++++++++++++++++++++--
2024-11-14 00:37:51,781 [     scc.git] DEBUG  1 file changed, 24 insertions(+), 2 deletions(-)
2024-11-14 00:37:52,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:52,129 [     scc.git] DEBUG Calling 'git submodule update'
2024-11-14 00:37:52,172 [     scc.git] DEBUG Get sha1 of %s
2024-11-14 00:37:52,172 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-11-14 00:37:52,177 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:37:52,217 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-11-14 00:37:52,227 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f2134edcb80> has no local changes
2024-11-14 00:37:52,228 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-web
Excluded PRs:
  - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
  - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group'
  - PR 590 knabar 'Update changelog'
  - PR 591 jburel 'Action update'
  - PR 592 jburel 'Replace pkg_resources'
  - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size'
  - PR 595 sukunis 'linkify supports urls that include {}[] characters'
  - PR 596 sukunis 'Linkify can parse anchor tag'

Generated by OMERO-python-superbuild-push#231 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/231/)'
2024-11-14 00:37:52,240 [     scc.git] DEBUG [detached HEAD 73f3a9815] merge master -Dorg -Ssuccess-only
2024-11-14 00:37:52,240 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:37:52,241 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-11-14 00:37:52,299 [  scc.config] DEBUG Found submodule.omero-dropbox.url
2024-11-14 00:37:52,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:52,535 [  scc.config] DEBUG Found submodule.omero-marshal.url
2024-11-14 00:37:52,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:52,935 [  scc.config] DEBUG Found submodule.omero-py.url
2024-11-14 00:37:53,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:53,340 [  scc.config] DEBUG Found submodule.omero-scripts.url
2024-11-14 00:37:53,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:53,726 [  scc.config] DEBUG Found submodule.omero-web.url
2024-11-14 00:37:54,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-11-14 00:37:54,112 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-11-14 00:37:54,137 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f21382c2f10> has local changes
2024-11-14 00:37:54,138 [     scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-python-superbuild
Already up to date.

Merged PRs:
  - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
  - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`'

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Repository: ome/omero-py
Excluded PRs:
  - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'
  - PR 427 Rdornier 'Add fileset folder creation'
  - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Merged PRs:
  - PR 223 will-moore 'don't attempt ROI stats on big images'

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Repository: ome/omero-web
Excluded PRs:
  - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
  - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group'
  - PR 590 knabar 'Update changelog'
  - PR 591 jburel 'Action update'
  - PR 592 jburel 'Replace pkg_resources'
  - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size'
  - PR 595 sukunis 'linkify supports urls that include {}[] characters'
  - PR 596 sukunis 'Linkify can parse anchor tag'

Generated by OMERO-python-superbuild-push#231 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/231/)'
2024-11-14 00:37:54,147 [     scc.git] DEBUG [detached HEAD 9343b33] merge master -Dorg -Ssuccess-only
2024-11-14 00:37:54,148 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-11-14 00:37:54,148 [     scc.git] DEBUG  6 files changed, 10 insertions(+), 10 deletions(-)
2024-11-14 00:37:54,148 [   scc.merge] INFO  Already up to date.
2024-11-14 00:37:54,148 [   scc.merge] INFO  
2024-11-14 00:37:54,148 [   scc.merge] INFO  Merged PRs:
2024-11-14 00:37:54,148 [   scc.merge] INFO    - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`'
2024-11-14 00:37:54,148 [   scc.merge] INFO    - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`'
2024-11-14 00:37:54,148 [   scc.merge] INFO  
2024-11-14 00:37:54,148 [   scc.merge] INFO  Repository: ome/omero-dropbox
2024-11-14 00:37:54,148 [   scc.merge] INFO  Already up to date.
2024-11-14 00:37:54,148 [   scc.merge] INFO  
2024-11-14 00:37:54,148 [   scc.merge] INFO  Merged PRs:
2024-11-14 00:37:54,148 [   scc.merge] INFO    - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-11-14 00:37:54,148 [   scc.merge] INFO  
2024-11-14 00:37:54,148 [   scc.merge] INFO  Repository: ome/omero-marshal
2024-11-14 00:37:54,148 [   scc.merge] INFO  Excluded PRs:
2024-11-14 00:37:54,148 [   scc.merge] INFO    - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-11-14 00:37:54,148 [   scc.merge] INFO    - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-11-14 00:37:54,148 [   scc.merge] INFO  Already up to date.
2024-11-14 00:37:54,148 [   scc.merge] INFO  
2024-11-14 00:37:54,148 [   scc.merge] INFO  Merged PRs:
2024-11-14 00:37:54,148 [   scc.merge] INFO    - PR 69 will-moore 'Roi encoder allows Shape None'
2024-11-14 00:37:54,148 [   scc.merge] INFO  
2024-11-14 00:37:54,148 [   scc.merge] INFO  Repository: ome/omero-py
2024-11-14 00:37:54,148 [   scc.merge] INFO  Excluded PRs:
2024-11-14 00:37:54,148 [   scc.merge] INFO    - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller)
2024-11-14 00:37:54,148 [   scc.merge] INFO    - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-11-14 00:37:54,149 [   scc.merge] INFO  Already up to date.
2024-11-14 00:37:54,149 [   scc.merge] INFO  
2024-11-14 00:37:54,149 [   scc.merge] INFO  Merged PRs:
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 199 joshmoore 'user: allow setting default group'
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 207 manics 'BlitzGateway.connect raise on error'
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 299 joshmoore 'Add parents and children to omero obj'
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 332 jburel 'Build conda'
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 391 joshmoore 'Add jstack command'
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 408 jburel 'remove deprecated method'
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 427 Rdornier 'Add fileset folder creation'
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers'
2024-11-14 00:37:54,149 [   scc.merge] INFO  
2024-11-14 00:37:54,149 [   scc.merge] INFO  Repository: ome/omero-scripts
2024-11-14 00:37:54,149 [   scc.merge] INFO  Excluded PRs:
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-11-14 00:37:54,149 [   scc.merge] INFO  Already up to date.
2024-11-14 00:37:54,149 [   scc.merge] INFO  
2024-11-14 00:37:54,149 [   scc.merge] INFO  Merged PRs:
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-11-14 00:37:54,149 [   scc.merge] INFO  
2024-11-14 00:37:54,149 [   scc.merge] INFO  Conflicting PRs (not included):
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-11-14 00:37:54,149 [   scc.merge] INFO  
2024-11-14 00:37:54,149 [   scc.merge] INFO  Repository: ome/omero-web
2024-11-14 00:37:54,149 [   scc.merge] INFO  Excluded PRs:
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT)
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-11-14 00:37:54,149 [   scc.merge] INFO    - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-11-14 00:37:54,150 [   scc.merge] INFO  Already up to date.
2024-11-14 00:37:54,150 [   scc.merge] INFO  
2024-11-14 00:37:54,150 [   scc.merge] INFO  Merged PRs:
2024-11-14 00:37:54,150 [   scc.merge] INFO    - PR 527 will-moore 'Add some initial CSP settings to test'
2024-11-14 00:37:54,150 [   scc.merge] INFO    - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-11-14 00:37:54,150 [   scc.merge] INFO    - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group'
2024-11-14 00:37:54,150 [   scc.merge] INFO    - PR 590 knabar 'Update changelog'
2024-11-14 00:37:54,150 [   scc.merge] INFO    - PR 591 jburel 'Action update'
2024-11-14 00:37:54,150 [   scc.merge] INFO    - PR 592 jburel 'Replace pkg_resources'
2024-11-14 00:37:54,150 [   scc.merge] INFO    - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size'
2024-11-14 00:37:54,150 [   scc.merge] INFO    - PR 595 sukunis 'linkify supports urls that include {}[] characters'
2024-11-14 00:37:54,150 [   scc.merge] INFO    - PR 596 sukunis 'Linkify can parse anchor tag'
2024-11-14 00:37:54,150 [   scc.merge] INFO  
2024-11-14 00:37:54,150 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-11-14 00:37:54,150 [     scc.git] DEBUG Calling 'git remote'
2024-11-14 00:37:54,155 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-11-14 00:37:54,155 [     scc.git] DEBUG Calling 'git remote'
2024-11-14 00:37:54,159 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:37:54,159 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-11-14 00:37:54,159 [     scc.git] DEBUG Calling 'git remote'
2024-11-14 00:37:54,163 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:37:54,163 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-11-14 00:37:54,163 [     scc.git] DEBUG Calling 'git remote'
2024-11-14 00:37:54,167 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:37:54,167 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-11-14 00:37:54,167 [     scc.git] DEBUG Calling 'git remote'
2024-11-14 00:37:54,171 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-11-14 00:37:54,171 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-11-14 00:37:54,171 [     scc.git] DEBUG Calling 'git remote'
2024-11-14 00:37:54,175 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 4fd72efa
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 213bb61ad
nothing to commit, working tree clean
HEAD detached from e849d72
nothing to commit, working tree clean
2024-11-14 00:38:22,654 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS