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11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
11:56:37 creating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.3__0/
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
11:56:37 creating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.4__0/
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
11:56:37 creating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4__0/
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4__0/OMERO3A__11.sql
11:56:37 creating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.0__0/
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
11:56:37 creating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.1__1/
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
11:56:37 creating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.2__0/
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
11:56:37 creating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
11:56:37 creating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__1/
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
11:56:37 creating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__2/
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
11:56:37 creating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__3/
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
11:56:37 creating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/psql-footer.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/psql-header.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/schema.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/views.sql
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/test.xml
11:56:37 inflating: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/update_dependencies.sh
11:56:37 extracting: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/components/antlib/resources/gitversion.xml
11:56:37 extracting: openmicroscopy-5.6.3-614-3c139506b6-ice36-b4/components/tools/OmeroCpp/cmake/GitVersion.cmake
11:56:38 + rm -f openmicroscopy-5.6.3-614-3c139506b6-ice36-b4.zip
11:56:38 + mv /home/omero/workspace/OMERO-training/openmicroscopy-5.6.3-614-3c139506b6-ice36-b4 /home/omero/workspace/OMERO-training/openmicroscopy
11:56:38 + export OMERODIR=/home/omero/workspace/OMERO-training/OMERO.server
11:56:38 + OMERODIR=/home/omero/workspace/OMERO-training/OMERO.server
11:56:38 ++ ls OMERO.server-5.6.3-614-3c139506b6-ice36-b4.zip
11:56:38 + ZIP=OMERO.server-5.6.3-614-3c139506b6-ice36-b4.zip
11:56:38 + DIST=OMERO.server-5.6.3-614-3c139506b6-ice36-b4
11:56:38 + unzip -n OMERO.server-5.6.3-614-3c139506b6-ice36-b4.zip
11:56:38 Archive: OMERO.server-5.6.3-614-3c139506b6-ice36-b4.zip
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/blitz/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/grid/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/profiles/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/error/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/grid/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/luts/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/luts/janelia/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/luts/matplotlib/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/luts/ncsa_paledit/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/luts/seaborn/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/luts/wcif/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/omero/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/omero/analysis_scripts/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/omero/annotation_scripts/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/omero/export_scripts/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/omero/figure_scripts/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/omero/import_scripts/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/scripts/omero/util_scripts/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/server/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/share/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/share/licenses/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/misc/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3A__1/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3A__10/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3A__11/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3A__2/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3A__3/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3A__4/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3A__5/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3A__6/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3A__7/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3A__8/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3A__9/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3__4/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3__5/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3__6/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO3__7/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.1__0/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.2__0/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.2__0/t/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.3__0/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4.4__0/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4__0/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.0__0/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.1__1/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.2__0/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__1/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__2/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__3/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/var/
11:56:38 creating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/var/tmp/
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/LICENSE.txt
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/backup.cfg
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/blitz/mail-senders.example
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/blitz/mail-server.example
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/build.properties
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/env.bat
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/env.sh
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/hibernate.properties
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/ice.config
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/logback-cli.xml
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/logback-indexing-cli.xml
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/logback-indexing.xml
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/logback.xml
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/mime.types
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/node1.cfg
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/node2.cfg
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/omero.properties
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/profiles/psql
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/rollover.cfg
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/Windows.cfg
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/error/maintainance.html
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/grid/README
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/grid/default.xml
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/grid/templates.xml
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/grid/windefault.xml
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/ice.config
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/internal.cfg
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/master.cfg
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/templates/robot.template
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/etc/testdropbox.config
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/history.rst
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/OMEZarrReader.jar
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/accessors-smart.jar
11:56:38 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/activation.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/aggdesigner-algorithm.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/aircompressor.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/antlr.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/aopalliance.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/apiguardian-api.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/asm.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/avatica-core.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/avatica-metrics.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/aws-java-sdk-core.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/aws-java-sdk-kms.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/aws-java-sdk-s3.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/base.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/batik-anim.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/batik-awt-util.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/batik-bridge.jar
11:56:39 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/lib/client/batik-codec.jar
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11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO4__0/OMERO3A__11.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/psql-footer.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/psql-header.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/schema.sql
11:56:53 inflating: OMERO.server-5.6.3-614-3c139506b6-ice36-b4/sql/psql/OMERO5.4__0/views.sql
11:56:54 + rm -f OMERO.server-5.6.3-614-3c139506b6-ice36-b4.zip
11:56:54 + mv /home/omero/workspace/OMERO-training/OMERO.server-5.6.3-614-3c139506b6-ice36-b4 /home/omero/workspace/OMERO-training/OMERO.server
11:56:54 + source /home/omero/workspace/OMERO-training/.venv3/bin/activate
11:56:54 ++ deactivate nondestructive
11:56:54 ++ '[' -n '' ']'
11:56:54 ++ '[' -n '' ']'
11:56:54 ++ hash -r
11:56:54 ++ '[' -n '' ']'
11:56:54 ++ unset VIRTUAL_ENV
11:56:54 ++ unset VIRTUAL_ENV_PROMPT
11:56:54 ++ '[' '!' nondestructive = nondestructive ']'
11:56:54 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-training/.venv3
11:56:54 ++ export VIRTUAL_ENV
11:56:54 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:56:54 ++ PATH=/home/omero/workspace/OMERO-training/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:56:54 ++ export PATH
11:56:54 ++ '[' -n '' ']'
11:56:54 ++ '[' -z '' ']'
11:56:54 ++ _OLD_VIRTUAL_PS1=
11:56:54 ++ PS1='(.venv3) '
11:56:54 ++ export PS1
11:56:54 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
11:56:54 ++ export VIRTUAL_ENV_PROMPT
11:56:54 ++ hash -r
11:56:54 + for x in *.gz
11:56:54 + pip install omero_dropbox-5.7.1.dev0.tar.gz
11:56:55 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
11:56:55 Installing build dependencies: started
11:56:56 Installing build dependencies: finished with status 'done'
11:56:56 Getting requirements to build wheel: started
11:56:57 Getting requirements to build wheel: finished with status 'done'
11:56:57 Preparing metadata (pyproject.toml): started
11:56:57 Preparing metadata (pyproject.toml): finished with status 'done'
11:56:57 Collecting omero-py (from omero-dropbox==5.7.1.dev0)
11:56:57 Using cached omero_py-5.22.1-py3-none-any.whl.metadata (6.5 kB)
11:56:57 Collecting appdirs (from omero-py->omero-dropbox==5.7.1.dev0)
11:56:57 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
11:56:57 Collecting future (from omero-py->omero-dropbox==5.7.1.dev0)
11:56:57 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
11:56:57 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.6)
11:56:57 Collecting Pillow>=10.0.0 (from omero-py->omero-dropbox==5.7.1.dev0)
11:56:57 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.1 kB)
11:56:58 Collecting PyYAML (from omero-py->omero-dropbox==5.7.1.dev0)
11:56:58 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
11:56:58 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
11:56:58 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.34.2)
11:56:58 Collecting portalocker (from omero-py->omero-dropbox==5.7.1.dev0)
11:56:58 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
11:56:58 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.9)
11:56:58 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.18)
11:56:58 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.7.0)
11:56:58 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.6.17)
11:56:58 Using cached omero_py-5.22.1-py3-none-any.whl (2.8 MB)
11:56:58 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
11:56:58 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
11:56:58 Using cached future-1.0.0-py3-none-any.whl (491 kB)
11:56:58 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
11:56:58 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
11:56:58 Building wheels for collected packages: omero-dropbox
11:56:58 Building wheel for omero-dropbox (pyproject.toml): started
11:56:58 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
11:56:58 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49153 sha256=2b89fdc1b95105ee5bb95dbe88e7d73499d82b0940a66b0c80ca39fea1f52582
11:56:58 Stored in directory: /home/omero/.cache/pip/wheels/27/2f/e4/2a907ecffe4660d4c840758e6c0660e7ef9d3bb50ad634b559
11:56:58 Successfully built omero-dropbox
11:56:58 Installing collected packages: appdirs, PyYAML, portalocker, Pillow, future, omero-py, omero-dropbox
11:57:31
11:57:31 Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 future-1.0.0 omero-dropbox-5.7.1.dev0 omero-py-5.22.1 portalocker-3.2.0
11:57:31 + for x in *.gz
11:57:31 + pip install omero_marshal-0.9.2.dev0.tar.gz
11:57:32 Processing ./omero_marshal-0.9.2.dev0.tar.gz
11:57:32 Installing build dependencies: started
11:57:34 Installing build dependencies: finished with status 'done'
11:57:34 Getting requirements to build wheel: started
11:57:34 Getting requirements to build wheel: finished with status 'done'
11:57:34 Preparing metadata (pyproject.toml): started
11:57:35 Preparing metadata (pyproject.toml): finished with status 'done'
11:57:35 Building wheels for collected packages: omero_marshal
11:57:35 Building wheel for omero_marshal (pyproject.toml): started
11:57:35 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
11:57:35 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88129 sha256=978c4ec6ab2cf4074a1d8e3c406447ec53a66dcc683eff54f9829a29e95d5fef
11:57:35 Stored in directory: /home/omero/.cache/pip/wheels/a7/49/f8/ee97ae6cd0ac1217d15421daf522887b20ca2595964479e97a
11:57:35 Successfully built omero_marshal
11:57:35 Installing collected packages: omero_marshal
11:57:39 Successfully installed omero_marshal-0.9.2.dev0
11:57:39 + for x in *.gz
11:57:39 + pip install omero_py-5.22.2.dev0.tar.gz
11:57:40 Processing ./omero_py-5.22.2.dev0.tar.gz
11:57:40 Installing build dependencies: started
11:57:42 Installing build dependencies: finished with status 'done'
11:57:42 Getting requirements to build wheel: started
11:57:43 Getting requirements to build wheel: finished with status 'done'
11:57:43 Preparing metadata (pyproject.toml): started
11:57:43 Preparing metadata (pyproject.toml): finished with status 'done'
11:57:43 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.4.4)
11:57:43 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.0.0)
11:57:43 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.4.6)
11:57:43 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (12.3.0)
11:57:43 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (6.0.3)
11:57:43 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.6.5)
11:57:43 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.34.2)
11:57:43 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.2.0)
11:57:43 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.4.9)
11:57:43 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.18)
11:57:43 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2.7.0)
11:57:43 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2026.6.17)
11:57:43 Building wheels for collected packages: omero-py
11:57:43 Building wheel for omero-py (pyproject.toml): started
11:57:44 Building wheel for omero-py (pyproject.toml): finished with status 'done'
11:57:44 Created wheel for omero-py: filename=omero_py-5.22.2.dev0-py3-none-any.whl size=2787060 sha256=edefd68dc49975ac8055007a4cfa1144e554714104f5abca021bc53340a958c0
11:57:44 Stored in directory: /home/omero/.cache/pip/wheels/67/6d/a0/54908d8e3aee8366415fea8426f418a6717addeb1669d2e673
11:57:44 Successfully built omero-py
11:57:44 Installing collected packages: omero-py
11:57:44 Attempting uninstall: omero-py
11:57:44 Found existing installation: omero-py 5.22.1
11:57:45 Uninstalling omero-py-5.22.1:
11:57:53 Successfully uninstalled omero-py-5.22.1
11:58:12 Successfully installed omero-py-5.22.2.dev0
11:58:12 + for x in *.gz
11:58:12 + pip install omero_scripts-5.10.1.dev0.tar.gz
11:58:13 Processing ./omero_scripts-5.10.1.dev0.tar.gz
11:58:13 Installing build dependencies: started
11:58:14 Installing build dependencies: finished with status 'done'
11:58:14 Getting requirements to build wheel: started
11:58:15 Getting requirements to build wheel: finished with status 'done'
11:58:15 Preparing metadata (pyproject.toml): started
11:58:15 Preparing metadata (pyproject.toml): finished with status 'done'
11:58:15 Building wheels for collected packages: omero-scripts
11:58:15 Building wheel for omero-scripts (pyproject.toml): started
11:58:15 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
11:58:15 Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=136999 sha256=ddab90aeb27eb622384a353aa0832c01c9bdbc4cb80c1bf225747c1df5cbbeda
11:58:15 Stored in directory: /home/omero/.cache/pip/wheels/88/2f/31/9478f1cef9d86ee7a706f3c8d94d67d22081ff846c64d43aa0
11:58:15 Successfully built omero-scripts
11:58:15 Installing collected packages: omero-scripts
11:58:16 Successfully installed omero-scripts-5.10.1.dev0
11:58:16 + for x in *.gz
11:58:16 + pip install omero_web-5.32.1.dev0.tar.gz
11:58:17 Processing ./omero_web-5.32.1.dev0.tar.gz
11:58:18 Installing build dependencies: started
11:58:19 Installing build dependencies: finished with status 'done'
11:58:19 Getting requirements to build wheel: started
11:58:19 Getting requirements to build wheel: finished with status 'done'
11:58:19 Preparing metadata (pyproject.toml): started
11:58:19 Preparing metadata (pyproject.toml): finished with status 'done'
11:58:19 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (5.22.2.dev0)
11:58:19 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.32.1.dev0)
11:58:19 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl.metadata (27 kB)
11:58:20 Collecting Django<5.3,>=5.2.9 (from omero-web==5.32.1.dev0)
11:58:20 Using cached django-5.2.16-py3-none-any.whl.metadata (4.1 kB)
11:58:20 Collecting django-pipeline>=4.1.0 (from omero-web==5.32.1.dev0)
11:58:20 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
11:58:20 Collecting django-cors-headers==3.7.0 (from omero-web==5.32.1.dev0)
11:58:20 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
11:58:20 Collecting whitenoise>=5.3.0 (from omero-web==5.32.1.dev0)
11:58:20 Using cached whitenoise-6.12.0-py3-none-any.whl.metadata (3.7 kB)
11:58:20 Collecting gunicorn>=19.3 (from omero-web==5.32.1.dev0)
11:58:20 Using cached gunicorn-26.0.0-py3-none-any.whl.metadata (5.4 kB)
11:58:20 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (0.9.2.dev0)
11:58:20 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (12.3.0)
11:58:20 Collecting pytz (from omero-web==5.32.1.dev0)
11:58:20 Using cached pytz-2026.2-py2.py3-none-any.whl.metadata (22 kB)
11:58:20 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (3.2.0)
11:58:20 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (26.2)
11:58:20 Collecting importlib-resources (from omero-web==5.32.1.dev0)
11:58:20 Using cached importlib_resources-7.1.0-py3-none-any.whl.metadata (4.0 kB)
11:58:20 Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.32.1.dev0)
11:58:20 Using cached asgiref-3.11.1-py3-none-any.whl.metadata (9.3 kB)
11:58:20 Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.32.1.dev0)
11:58:20 Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
11:58:20 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.32.1.dev0) (83.0.0)
11:58:20 Collecting wheel (from django-pipeline>=4.1.0->omero-web==5.32.1.dev0)
11:58:20 Using cached wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB)
11:58:20 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (1.4.4)
11:58:20 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (1.0.0)
11:58:20 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.4.6)
11:58:20 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (6.0.3)
11:58:20 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.6.5)
11:58:20 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.34.2)
11:58:20 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.4.9)
11:58:20 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.18)
11:58:20 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.7.0)
11:58:20 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (2026.6.17)
11:58:20 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
11:58:20 Using cached django-5.2.16-py3-none-any.whl (8.3 MB)
11:58:20 Using cached asgiref-3.11.1-py3-none-any.whl (24 kB)
11:58:20 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl (32 kB)
11:58:20 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
11:58:20 Using cached gunicorn-26.0.0-py3-none-any.whl (212 kB)
11:58:20 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
11:58:20 Using cached whitenoise-6.12.0-py3-none-any.whl (20 kB)
11:58:20 Using cached importlib_resources-7.1.0-py3-none-any.whl (37 kB)
11:58:20 Using cached pytz-2026.2-py2.py3-none-any.whl (510 kB)
11:58:20 Using cached wheel-0.47.0-py3-none-any.whl (32 kB)
11:58:21 Building wheels for collected packages: omero-web
11:58:21 Building wheel for omero-web (pyproject.toml): started
11:58:22 Building wheel for omero-web (pyproject.toml): finished with status 'done'
11:58:22 Created wheel for omero-web: filename=omero_web-5.32.1.dev0-py3-none-any.whl size=2820645 sha256=2f622aae51fffc3c845f82a0a7fbb961c9ca5bcf4bd3427039ad4a8a8f0e365d
11:58:22 Stored in directory: /home/omero/.cache/pip/wheels/91/ad/79/ec318377d2e814ec25bf29bc612d81f9a885cbc4aa52a338d5
11:58:22 Successfully built omero-web
11:58:22 Installing collected packages: pytz, whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web
11:59:38
11:59:38 Successfully installed Django-5.2.16 asgiref-3.11.1 concurrent-log-handler-0.9.29 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-26.0.0 importlib-resources-7.1.0 omero-web-5.32.1.dev0 pytz-2026.2 sqlparse-0.5.5 wheel-0.47.0 whitenoise-6.12.0
11:59:38 + cd /home/omero/workspace/OMERO-training/OMERO.server
11:59:38 + bash /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_setup.sh
11:59:38 + HOSTNAME=0a4e1f842665
11:59:38 + PORT=4064
11:59:38 + WEBHOST=http://nginx/web
11:59:38 + SERVER_NAME=omero
11:59:38 + ROOT_PASSWORD=omero
11:59:38 + GROUP_NAME=training_group
11:59:38 + GROUP_NAME_2=training_group-2
11:59:38 + USER_NAME=training_user
11:59:38 + USER_NAME_2=training_user-2
11:59:38 + LIGHTADMIN_USER_NAME=ladmin_user
11:59:38 + USER_PASSWORD=ome
11:59:38 + CONFIG_FILENAME=training_ice.config
11:59:38 + omero login root@0a4e1f842665:4064 -w omero
11:59:41 Created session for root@0a4e1f842665:4064. Idle timeout: 10 min. Current group: system
11:59:41 + omero group add training_group --type read-only --ignore-existing
11:59:42 Using session for root@0a4e1f842665:4064. Idle timeout: 10 min. Current group: system
11:59:42 Added group training_group (id=3) with permissions rwr---
11:59:43 + omero group add training_group-2 --type read-only --ignore-existing
11:59:44 Using session for root@0a4e1f842665:4064. Idle timeout: 10 min. Current group: system
11:59:44 Added group training_group-2 (id=4) with permissions rwr---
11:59:45 + omero user add training_user training_user training_user training_group training_group-2 --ignore-existing -P ome
11:59:46 Using session for root@0a4e1f842665:4064. Idle timeout: 10 min. Current group: system
11:59:46 Added user training_user (id=2) with password
11:59:46 + omero user joingroup --name training_user --group-name training_group training_group-2
11:59:48 Using session for root@0a4e1f842665:4064. Idle timeout: 10 min. Current group: system
11:59:48 2 is already in group 3
11:59:48 2 is already in group 4
11:59:48 + omero user add training_user-2 training_user-2 training_user-2 training_group training_group-2 --ignore-existing -P ome
11:59:50 Using session for root@0a4e1f842665:4064. Idle timeout: 10 min. Current group: system
11:59:50 Added user training_user-2 (id=3) with password
11:59:50 + omero user joingroup --name training_user-2 --group-name training_group training_group-2
11:59:52 Using session for root@0a4e1f842665:4064. Idle timeout: 10 min. Current group: system
11:59:52 3 is already in group 3
11:59:52 3 is already in group 4
11:59:52 + omero user add ladmin_user ladmin_user ladmin_user training_group training_group-2 -a --ignore-existing -P ome
11:59:54 Using session for root@0a4e1f842665:4064. Idle timeout: 10 min. Current group: system
11:59:54 Added user ladmin_user (id=4) with password
11:59:54 + omero user joingroup --name ladmin_user --group-name training_group training_group-2
11:59:56 Using session for root@0a4e1f842665:4064. Idle timeout: 10 min. Current group: system
11:59:56 4 is already in group 3
11:59:56 4 is already in group 4
11:59:56 ++ omero user info ladmin_user --style plain
11:59:56 ++ cut -d, -f1
11:59:57 Using session for root@0a4e1f842665:4064. Idle timeout: 10 min. Current group: system
11:59:58 + id=4
11:59:58 + omero obj map-set Experimenter:4 config AdminPrivilege:Sudo true
11:59:59 Using session for root@0a4e1f842665:4064. Idle timeout: 10 min. Current group: system
11:59:59 Experimenter:4
11:59:59 + omero logout
12:00:01 + touch test.fake
12:00:01 + omero login training_user@0a4e1f842665:4064 -w ome -g training_group
12:00:03 Created session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:03 + nProjects=1
12:00:03 + nDatasets=2
12:00:03 + echo 'Creating projects and datasets'
12:00:03 Creating projects and datasets
12:00:03 + (( i=1 ))
12:00:03 + (( i<=1 ))
12:00:03 ++ omero obj new Project 'name=Project 1'
12:00:06 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:06 + project=Project:1
12:00:06 + (( j=1 ))
12:00:06 + (( j<=2 ))
12:00:06 ++ omero obj new Dataset 'name=Dataset 1-1'
12:00:09 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:09 + dataset=Dataset:1
12:00:09 + omero obj new ProjectDatasetLink parent=Project:1 child=Dataset:1
12:00:11 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:11 ProjectDatasetLink:1
12:00:11 + echo 'Importing image into dataset'
12:00:11 Importing image into dataset
12:00:11 + omero import -d Dataset:1 test.fake --debug ERROR
12:00:14 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:15 2026-07-09 12:00:15,591 299 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
12:00:15 2026-07-09 12:00:15,612 320 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
12:00:20 Image:1
12:00:20 Other imported objects:
12:00:20 Fileset:1
12:00:20
12:00:20 ==> Summary
12:00:20 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:03.071
12:00:21 + (( j++ ))
12:00:21 + (( j<=2 ))
12:00:21 ++ omero obj new Dataset 'name=Dataset 1-2'
12:00:23 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:23 + dataset=Dataset:2
12:00:23 + omero obj new ProjectDatasetLink parent=Project:1 child=Dataset:2
12:00:25 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:25 ProjectDatasetLink:2
12:00:25 + echo 'Importing image into dataset'
12:00:25 Importing image into dataset
12:00:25 + omero import -d Dataset:2 test.fake --debug ERROR
12:00:27 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:28 2026-07-09 12:00:28,623 220 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
12:00:28 2026-07-09 12:00:28,637 234 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
12:00:32 Image:2
12:00:32 Other imported objects:
12:00:32 Fileset:2
12:00:32
12:00:32 ==> Summary
12:00:32 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:02.140
12:00:32 + (( j++ ))
12:00:32 + (( j<=2 ))
12:00:32 + (( i++ ))
12:00:32 + (( i<=1 ))
12:00:32 + (( j=1 ))
12:00:32 + (( j<=2 ))
12:00:32 + omero obj new Dataset 'name=Orphaned dataset 1'
12:00:34 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:34 Dataset:3
12:00:34 + (( j++ ))
12:00:34 + (( j<=2 ))
12:00:34 + omero obj new Dataset 'name=Orphaned dataset 2'
12:00:36 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:36 Dataset:4
12:00:36 + (( j++ ))
12:00:36 + (( j<=2 ))
12:00:36 + echo 'Importing image file'
12:00:36 Importing image file
12:00:36 + touch 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
12:00:36 + omero import 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
12:00:41 ++ sed -n -e 's/^Image://p' image_import.log
12:00:41 + imageid=3
12:00:41 ++ omero obj new MapAnnotation
12:00:43 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:43 + MAP=MapAnnotation:1
12:00:43 + omero obj map-set MapAnnotation:1 mapValue testkey testvalue
12:00:46 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:46 MapAnnotation:1
12:00:46 + omero obj new ImageAnnotationLink parent=Image:3 child=MapAnnotation:1
12:00:49 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:49 ImageAnnotationLink:1
12:00:49 ++ omero obj new Screen name=Screen
12:00:51 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:52 + screen=Screen:1
12:00:52 ++ omero obj new Plate name=Plate
12:00:54 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:54 + plate=Plate:1
12:00:54 + omero obj new ScreenPlateLink parent=Screen:1 child=Plate:1
12:00:56 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:00:56 ScreenPlateLink:1
12:00:57 + echo 'Importing SPW file'
12:00:57 Importing SPW file
12:00:57 + touch 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake'
12:00:57 + omero import -r Screen:1 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake'
12:01:04 ++ sed -n -e 's/^Plate://p' plate_import.log
12:01:04 + plateid=2
12:01:04 + omero logout
12:01:07 + omero login training_user-2@0a4e1f842665:4064 -w ome -g training_group
12:01:09 Created session for training_user-2@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:01:09 + omero obj new Project 'name=Project 0'
12:01:11 Using session for training_user-2@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:01:11 Project:2
12:01:11 + omero obj new Dataset 'name=Dataset 0'
12:01:14 Using session for training_user-2@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:01:14 Dataset:5
12:01:14 + omero import test.fake --debug ERROR
12:01:17 Using session for training_user-2@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:01:18 2026-07-09 12:01:18,025 214 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
12:01:18 2026-07-09 12:01:18,038 227 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
12:01:20 Image:7
12:01:20 Other imported objects:
12:01:20 Fileset:5
12:01:20
12:01:20 ==> Summary
12:01:20 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:01.026
12:01:20 + omero obj new Screen name=Screen
12:01:22 Using session for training_user-2@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:01:22 Screen:2
12:01:22 + omero obj new Plate name=Plate
12:01:24 Using session for training_user-2@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group
12:01:24 Plate:3
12:01:24 + omero login training_user@0a4e1f842665:4064 -w ome -g training_group-2
12:01:26 Created session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group-2
12:01:26 + omero obj new Project 'name=Project 0'
12:01:28 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group-2
12:01:28 Project:3
12:01:28 + omero obj new Dataset 'name=Dataset 0'
12:01:30 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group-2
12:01:30 Dataset:6
12:01:30 + omero import test.fake --debug ERROR
12:01:32 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group-2
12:01:33 2026-07-09 12:01:33,445 219 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
12:01:33 2026-07-09 12:01:33,458 232 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
12:01:35 Image:8
12:01:35 Other imported objects:
12:01:35 Fileset:6
12:01:35
12:01:35 ==> Summary
12:01:35 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:01.093
12:01:36 + omero obj new Screen name=Screen
12:01:37 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group-2
12:01:37 Screen:3
12:01:38 + omero obj new Plate name=Plate
12:01:39 Using session for training_user@0a4e1f842665:4064. Idle timeout: 10 min. Current group: training_group-2
12:01:39 Plate:4
12:01:40 + omero logout
12:01:42 + echo omero.host=0a4e1f842665
12:01:42 + echo omero.port=4064
12:01:42 + echo omero.webhost=http://nginx/web
12:01:42 + echo omero.servername=omero
12:01:42 + echo omero.user=training_user
12:01:42 + echo omero.pass=ome
12:01:42 + echo omero.group=training_group
12:01:42 + echo omero.projectid=1
12:01:42 + echo omero.datasetid=2
12:01:42 + echo omero.imageid=3
12:01:42 + echo omero.plateid=2
12:01:42 + echo omero.screenid=1
12:01:42 + echo omero.group2=training_group-2
12:01:42 + echo omero.ladmin=ladmin_user
12:01:42 + rm 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake' test.fake 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
12:01:42 + mv training_ice.config /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training
12:01:42 + omero sessions clear
12:01:43 1 session(s) cleared
12:01:43 !! 07/09/26 12:01:43.991 error: communicator not destroyed during global destruction.+ export ICE_CONFIG=/home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_ice.config
12:01:44 + ICE_CONFIG=/home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_ice.config
12:01:44 + pip install --upgrade requests
12:01:44 Requirement already satisfied: requests in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (2.34.2)
12:01:44 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (3.4.9)
12:01:44 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (3.18)
12:01:45 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (2.7.0)
12:01:45 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (2026.6.17)
12:01:45 + python /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/python
12:01:54 Running training suite
12:01:54 created 20 shapes
12:01:54 retrieved 20 shapes in 4 batches
12:01:54 Current user:
12:01:54 ID: 2
12:01:54 Username: training_user
12:01:54 Full Name: training_user training_user
12:01:54 Is Admin: False
12:01:54 []
12:01:54 Member of:
12:01:54 ID: 3 Name: training_group
12:01:54 ID: 4 Name: training_group-2
12:01:54 Current group: training_group
12:01:54 Group owners:
12:01:54 Group members:
12:01:54 ID: 2 UserName: training_user Name: training_user training_user
12:01:54 ID: 3 UserName: training_user-2 Name: training_user-2 training_user-2
12:01:54 ID: 4 UserName: ladmin_user Name: ladmin_user ladmin_user
12:01:54 Owner of:
12:01:54 Admins:
12:01:54 ID: 0 UserName: root Name: root root
12:01:54 ID: 4 UserName: ladmin_user Name: ladmin_user ladmin_user
12:01:54 Created new Image:9 Name:"numpy image"
12:01:54 newPlane for z,t: 0 0 uint8 0 127
12:01:54 newPlane for z,t: 0 1 uint8 0 127
12:01:54 newPlane for z,t: 0 2 uint8 0 127
12:01:54 newPlane for z,t: 0 3 uint8 0 127
12:01:54 newPlane for z,t: 0 4 uint8 0 127
12:01:54 newPlane for z,t: 0 5 uint8 0 127
12:01:54 newPlane for z,t: 0 6 uint8 0 127
12:01:54 newPlane for z,t: 0 7 uint8 0 127
12:01:54 newPlane for z,t: 0 8 uint8 0 127
12:01:54 newPlane for z,t: 0 9 uint8 0 127
12:01:54 newPlane for z,t: 1 0 uint8 0 127
12:01:54 newPlane for z,t: 1 1 uint8 0 127
12:01:54 newPlane for z,t: 1 2 uint8 0 127
12:01:54 newPlane for z,t: 1 3 uint8 0 127
12:01:54 newPlane for z,t: 1 4 uint8 0 127
12:01:54 newPlane for z,t: 1 5 uint8 0 127
12:01:54 newPlane for z,t: 1 6 uint8 0 127
12:01:54 newPlane for z,t: 1 7 uint8 0 127
12:01:54 newPlane for z,t: 1 8 uint8 0 127
12:01:54 newPlane for z,t: 1 9 uint8 0 127
12:01:54 newPlane for z,t: 2 0 uint8 0 127
12:01:54 newPlane for z,t: 2 1 uint8 0 127
12:01:54 newPlane for z,t: 2 2 uint8 0 127
12:01:54 newPlane for z,t: 2 3 uint8 0 127
12:01:54 newPlane for z,t: 2 4 uint8 0 127
12:01:54 newPlane for z,t: 2 5 uint8 0 127
12:01:54 newPlane for z,t: 2 6 uint8 0 127
12:01:54 newPlane for z,t: 2 7 uint8 0 127
12:01:54 newPlane for z,t: 2 8 uint8 0 127
12:01:54 newPlane for z,t: 2 9 uint8 0 127
12:01:54 newPlane for z,t: 3 0 uint8 0 127
12:01:54 newPlane for z,t: 3 1 uint8 0 127
12:01:54 newPlane for z,t: 3 2 uint8 0 127
12:01:54 newPlane for z,t: 3 3 uint8 0 127
12:01:54 newPlane for z,t: 3 4 uint8 0 127
12:01:54 newPlane for z,t: 3 5 uint8 0 127
12:01:54 newPlane for z,t: 3 6 uint8 0 127
12:01:54 newPlane for z,t: 3 7 uint8 0 127
12:01:54 newPlane for z,t: 3 8 uint8 0 127
12:01:54 newPlane for z,t: 3 9 uint8 0 127
12:01:54 newPlane for z,t: 4 0 uint8 0 127
12:01:54 newPlane for z,t: 4 1 uint8 0 127
12:01:54 newPlane for z,t: 4 2 uint8 0 127
12:01:54 newPlane for z,t: 4 3 uint8 0 127
12:01:54 newPlane for z,t: 4 4 uint8 0 127
12:01:54 newPlane for z,t: 4 5 uint8 0 127
12:01:54 newPlane for z,t: 4 6 uint8 0 127
12:01:54 newPlane for z,t: 4 7 uint8 0 127
12:01:54 newPlane for z,t: 4 8 uint8 0 127
12:01:54 newPlane for z,t: 4 9 uint8 0 127
12:01:54 Deleting, please wait.
12:01:54 Error? False
12:01:54 3 test&sizeT=10&sizeZ=5&sizeC=3.fake
12:01:54 training_user_2/Blitz-0-Ice.ThreadPool.Server-7/2026-07/09/12-00-39.773/ test&sizeT=10&sizeZ=5&sizeC=3.fake
12:01:54 1
12:01:54 training_user_2/Blitz-0-Ice.ThreadPool.Server-7/2026-07/09/12-00-39.773/ test&sizeT=10&sizeZ=5&sizeC=3.fake
12:01:54 Current group: training_group
12:01:54 Permissions: READ-ONLY (rwr---)
12:01:54 Project 1 Owner: training_user training_user
12:01:54 Project 0 Owner: training_user-2 training_user-2
12:01:54 Image: <_ImageWrapper id=3>
12:01:54 Image: <_ImageWrapper id=3> Group: training_group 3
12:01:54 Image: <_ImageWrapper id=3> Channel: 0
12:01:54 Channel: 1
12:01:54 Channel: 2
12:01:54
12:01:54
12:01:54 original_metadata
12:01:54 global_metadata
12:01:54 series_metadata
12:01:54
12:01:54 Plane at zct: 0 0 0
12:01:54 [[ 0 0 0 ... 253 254 255]
12:01:54 [ 0 0 0 ... 253 254 255]
12:01:54 [ 0 0 0 ... 253 254 255]
12:01:54 ...
12:01:54 [ 0 1 2 ... 253 254 255]
12:01:54 [ 0 1 2 ... 253 254 255]
12:01:54 [ 0 1 2 ... 253 254 255]]
12:01:54 shape: (512, 512)
12:01:54 min: 0 max: 255 pixel type: uint8
12:01:54
12:01:54 Z stack of tiles:
12:01:54 Tile: (0, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
12:01:54 Tile: (1, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
12:01:54 Tile: (2, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
12:01:54 Tile: (3, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
12:01:54 Tile: (4, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
12:01:54
12:01:54 Hyper stack of planes:
12:01:54 plane zct: (2, 0, 0) min: 0 max: 255
12:01:54 plane zct: (2, 0, 1) min: 0 max: 255
12:01:54 plane zct: (2, 0, 2) min: 0 max: 255
12:01:54 plane zct: (2, 0, 3) min: 0 max: 255
12:01:54 plane zct: (2, 0, 4) min: 0 max: 255
12:01:54 plane zct: (2, 0, 5) min: 0 max: 255
12:01:54 plane zct: (2, 0, 6) min: 0 max: 255
12:01:54 plane zct: (2, 0, 7) min: 0 max: 255
12:01:54 plane zct: (2, 0, 8) min: 0 max: 255
12:01:54 plane zct: (2, 0, 9) min: 0 max: 255
12:01:54 plane zct: (2, 1, 0) min: 0 max: 255
12:01:54 plane zct: (2, 1, 1) min: 0 max: 255
12:01:54 plane zct: (2, 1, 2) min: 0 max: 255
12:01:54 plane zct: (2, 1, 3) min: 0 max: 255
12:01:54 plane zct: (2, 1, 4) min: 0 max: 255
12:01:54 plane zct: (2, 1, 5) min: 0 max: 255
12:01:54 plane zct: (2, 1, 6) min: 0 max: 255
12:01:54 plane zct: (2, 1, 7) min: 0 max: 255
12:01:54 plane zct: (2, 1, 8) min: 0 max: 255
12:01:54 plane zct: (2, 1, 9) min: 0 max: 255
12:01:54 plane zct: (2, 2, 0) min: 0 max: 255
12:01:54 plane zct: (2, 2, 1) min: 0 max: 255
12:01:54 plane zct: (2, 2, 2) min: 0 max: 255
12:01:54 plane zct: (2, 2, 3) min: 0 max: 255
12:01:54 plane zct: (2, 2, 4) min: 0 max: 255
12:01:54 plane zct: (2, 2, 5) min: 0 max: 255
12:01:54 plane zct: (2, 2, 6) min: 0 max: 255
12:01:54 plane zct: (2, 2, 7) min: 0 max: 255
12:01:54 plane zct: (2, 2, 8) min: 0 max: 255
12:01:54 plane zct: (2, 2, 9) min: 0 max: 255
12:01:54 plane zct: (3, 0, 0) min: 0 max: 255
12:01:54 plane zct: (3, 0, 1) min: 0 max: 255
12:01:54 plane zct: (3, 0, 2) min: 0 max: 255
12:01:54 plane zct: (3, 0, 3) min: 0 max: 255
12:01:54 plane zct: (3, 0, 4) min: 0 max: 255
12:01:54 plane zct: (3, 0, 5) min: 0 max: 255
12:01:54 plane zct: (3, 0, 6) min: 0 max: 255
12:01:54 plane zct: (3, 0, 7) min: 0 max: 255
12:01:54 plane zct: (3, 0, 8) min: 0 max: 255
12:01:54 plane zct: (3, 0, 9) min: 0 max: 255
12:01:54 plane zct: (3, 1, 0) min: 0 max: 255
12:01:54 plane zct: (3, 1, 1) min: 0 max: 255
12:01:54 plane zct: (3, 1, 2) min: 0 max: 255
12:01:54 plane zct: (3, 1, 3) min: 0 max: 255
12:01:54 plane zct: (3, 1, 4) min: 0 max: 255
12:01:54 plane zct: (3, 1, 5) min: 0 max: 255
12:01:54 plane zct: (3, 1, 6) min: 0 max: 255
12:01:54 plane zct: (3, 1, 7) min: 0 max: 255
12:01:54 plane zct: (3, 1, 8) min: 0 max: 255
12:01:54 plane zct: (3, 1, 9) min: 0 max: 255
12:01:54 plane zct: (3, 2, 0) min: 0 max: 255
12:01:54 plane zct: (3, 2, 1) min: 0 max: 255
12:01:54 plane zct: (3, 2, 2) min: 0 max: 255
12:01:54 plane zct: (3, 2, 3) min: 0 max: 255
12:01:54 plane zct: (3, 2, 4) min: 0 max: 255
12:01:54 plane zct: (3, 2, 5) min: 0 max: 255
12:01:54 plane zct: (3, 2, 6) min: 0 max: 255
12:01:54 plane zct: (3, 2, 7) min: 0 max: 255
12:01:54 plane zct: (3, 2, 8) min: 0 max: 255
12:01:54 plane zct: (3, 2, 9) min: 0 max: 255
12:01:54 plane zct: (4, 0, 0) min: 0 max: 255
12:01:54 plane zct: (4, 0, 1) min: 0 max: 255
12:01:54 plane zct: (4, 0, 2) min: 0 max: 255
12:01:54 plane zct: (4, 0, 3) min: 0 max: 255
12:01:54 plane zct: (4, 0, 4) min: 0 max: 255
12:01:54 plane zct: (4, 0, 5) min: 0 max: 255
12:01:54 plane zct: (4, 0, 6) min: 0 max: 255
12:01:54 plane zct: (4, 0, 7) min: 0 max: 255
12:01:54 plane zct: (4, 0, 8) min: 0 max: 255
12:01:54 plane zct: (4, 0, 9) min: 0 max: 255
12:01:54 plane zct: (4, 1, 0) min: 0 max: 255
12:01:54 plane zct: (4, 1, 1) min: 0 max: 255
12:01:54 plane zct: (4, 1, 2) min: 0 max: 255
12:01:54 plane zct: (4, 1, 3) min: 0 max: 255
12:01:54 plane zct: (4, 1, 4) min: 0 max: 255
12:01:54 plane zct: (4, 1, 5) min: 0 max: 255
12:01:54 plane zct: (4, 1, 6) min: 0 max: 255
12:01:54 plane zct: (4, 1, 7) min: 0 max: 255
12:01:54 plane zct: (4, 1, 8) min: 0 max: 255
12:01:54 plane zct: (4, 1, 9) min: 0 max: 255
12:01:54 plane zct: (4, 2, 0) min: 0 max: 255
12:01:54 plane zct: (4, 2, 1) min: 0 max: 255
12:01:54 plane zct: (4, 2, 2) min: 0 max: 255
12:01:54 plane zct: (4, 2, 3) min: 0 max: 255
12:01:54 plane zct: (4, 2, 4) min: 0 max: 255
12:01:54 plane zct: (4, 2, 5) min: 0 max: 255
12:01:54 plane zct: (4, 2, 6) min: 0 max: 255
12:01:54 plane zct: (4, 2, 7) min: 0 max: 255
12:01:54 plane zct: (4, 2, 8) min: 0 max: 255
12:01:54 plane zct: (4, 2, 9) min: 0 max: 255
12:01:54 {0: [1514, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024]}
12:02:10
12:02:10 List Projects:
12:02:10 ==================================================
12:02:10 Project:1 Name:"Project 1" (owner=training_user)
12:02:10 Dataset:1 Name:"Dataset 1-1" (owner=training_user)
12:02:10 Image:1 Name:"test.fake" (owner=training_user)
12:02:10 Dataset:2 Name:"Dataset 1-2" (owner=training_user)
12:02:10 Image:2 Name:"test.fake" (owner=training_user)
12:02:10
12:02:10 List orphaned Datasets:
12:02:10 ==================================================
12:02:10 Dataset:3 Name:"Orphaned dataset 1" (owner=training_user)
12:02:10 Dataset:4 Name:"Orphaned dataset 2" (owner=training_user)
12:02:10 Dataset:5 Name:"Dataset 0" (owner=training_user-2)
12:02:10
12:02:10 Images in Dataset: 2
12:02:10 ==================================================
12:02:10 Image:2 Name:"test.fake" (owner=training_user)
12:02:10
12:02:10 Image:3
12:02:10 ==================================================
12:02:10 test&sizeT=10&sizeZ=5&sizeC=3.fake
12:02:10 X: 512
12:02:10 Y: 512
12:02:10 Z: 5
12:02:10 C: 3
12:02:10 T: 10
12:02:10 Channel: 0 Color: (255, 0, 0)
12:02:10 Lookup table: None
12:02:10 Is reverse intensity? False
12:02:10 Channel: 1 Color: (0, 255, 0)
12:02:10 Lookup table: None
12:02:10 Is reverse intensity? False
12:02:10 Channel: 2 Color: (0, 0, 255)
12:02:10 Lookup table: None
12:02:10 Is reverse intensity? False
12:02:10 Pixel Size X: None
12:02:10
12:02:10 List Screens:
12:02:10 ==================================================
12:02:10 Screen:1 Name:"Screen" (owner=training_user)
12:02:10 Plate:1 Name:"Plate" (owner=training_user)
12:02:10 Plate:2 Name:"Plate Name 0" (owner=training_user)
12:02:10 Screen:2 Name:"Screen" (owner=training_user-2)
12:02:10
12:02:10 Plate:2
12:02:10 ==================================================
12:02:10
12:02:10 Number of fields: (0, 0)
12:02:10
12:02:10 Grid size: {'rows': 1, 'columns': 3}
12:02:10
12:02:10 Wells in Plate: Plate Name 0
12:02:10 Well: 0 0 Fields: 1
12:02:10 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW] 4
12:02:10 Well: 0 1 Fields: 1
12:02:10 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW 2] 6
12:02:10 Well: 0 2 Fields: 1
12:02:10 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW 3] 5
12:02:10 1 <class 'omero.model.MapAnnotationI'>
12:02:10 added by training_user
12:02:10 Image ID: 3
12:02:10 Annotation ID: 1
12:02:10 3
12:02:10 Channel rendering settings:
12:02:10 Name: 0
12:02:10 Color: FF0000
12:02:10 Active: True
12:02:10 Levels: 0.0 - 255.0
12:02:10 Name: 1
12:02:10 Color: 00FF00
12:02:10 Active: True
12:02:10 Levels: 0.0 - 255.0
12:02:10 Name: 2
12:02:10 Color: 0000FF
12:02:10 Active: True
12:02:10 Levels: 0.0 - 255.0
12:02:10 isGreyscaleRenderingModel: False
12:02:10 Default Z/T positions:
12:02:10 Z = 2, T = 0
12:02:10 Rendering Defs on Image:
12:02:10 ID: 3 (owner: training_user training_user)
12:02:10 Adding a rectangle at theZ: 2, theT: 0, X: 50, Y: 200, width: 100, height: 50
12:02:10 ROI: ID: 2
12:02:10 Shape: id 21 theT 0 theZ 2 textValue test-Rectangle type Rectangle x 50.0 y 200.0 width 100.0 height 50.0
12:02:10 Shape: id 22 theT 0 theZ 2 textValue test-Ellipse type Ellipse x 200.0 y 50.0 radiusX 100.0 radiusY 50.0
12:02:10 ROI: ID: 3
12:02:10 Shape: id 23 theT 0 theZ 2 textValue test-Line type Line x1 50.0 x2 150.0 y1 200.0 y2 250.0
12:02:10 ROI: ID: 4
12:02:10 Shape: id 24 theT 0 theZ 0 textValue test-Mask type Mask x 50.0 y 50.0 width 100.0 height 100.0
12:02:10 ROI: ID: 5
12:02:10 Shape: id 25 theT 0 theZ 2 textValue test-Point type Point x 50.0 y 200.0
12:02:10 ROI: ID: 6
12:02:10 <class 'omero.model.PolygonI'> Not supported by this code
12:02:10 Shape: id 26 theT 0 theZ 2 textValue test-Polygon
12:02:10 Points 10000 Min 50.0 Mean 99.5 Max 149.0 Sum 149.0 StdDev 28.867513459481287
12:02:10 Points 1 Min 50.0 Mean 50.0 Max 50.0 Sum 50.0 StdDev 0.0
12:02:10 Points 5000 Min 50.0 Mean 99.5 Max 149.0 Sum 149.0 StdDev 28.86895708779012
12:02:10 Points 101 Min 50.0 Mean 100.0 Max 150.0 Sum 150.0 StdDev 29.300170647967224
12:02:10 Points 25145 Min 10.0 Mean 130.03957049115132 Max 249.0 Sum 249.0 StdDev 57.70727405876767
12:02:10 Points 15695 Min 0.0 Mean 157.55208665179993 Max 255.0 Sum 255.0 StdDev 72.87073453134771
12:02:10 Removing Shape from ROI...
12:02:10 Deleting ROI: 7
12:02:10 Table Columns:
12:02:10 Uid
12:02:10 MyStringColumnInit
12:02:10 Row count: 10
12:02:10
12:02:10 Get All Data for rows: [3, 5, 7]
12:02:10 Data for Column: Uid
12:02:10 1
12:02:10 2
12:02:10 3
12:02:10 4
12:02:10 5
12:02:10 6
12:02:10 7
12:02:10 8
12:02:10 9
12:02:10 10
12:02:10 Data for Column: MyStringColumnInit
12:02:10 one
12:02:10 two
12:02:10 three
12:02:10 four
12:02:10 five
12:02:10 six
12:02:10 seven
12:02:10 eight
12:02:10 nine
12:02:10 ten
12:02:10
12:02:10 Get All Data for rows with slice: [3, 5, 7]
12:02:10 Data for Column: Uid
12:02:10 4
12:02:10 6
12:02:10 8
12:02:10 Data for Column: MyStringColumnInit
12:02:10 four
12:02:10 six
12:02:10 eight
12:02:10
12:02:10 Get Data for cols: [1] and between rows: 3 - 7
12:02:10 Data for Column: MyStringColumnInit
12:02:10 four
12:02:10 five
12:02:10 six
12:02:10 seven
12:02:10
12:02:10 Get Data for cols: [1] and between rows: 3 - 7 with slice
12:02:10 Data for Column: MyStringColumnInit
12:02:10 four
12:02:10 five
12:02:10 six
12:02:10 seven
12:02:10 Query Results for Column: Uid
12:02:10 3
12:02:10 4
12:02:10 5
12:02:10 6
12:02:10 7
12:02:10 8
12:02:10 Query Results for Column: MyStringColumnInit
12:02:10 three
12:02:10 four
12:02:10 five
12:02:10 six
12:02:10 seven
12:02:10 eight
12:02:10 Opened table with row-count: 10
12:02:10 New dataset, Id: 7
12:02:10 {'TagAnnotation': 1, 'FileAnnotation': 0, 'CommentAnnotation': 0, 'LongAnnotation': 0, 'MapAnnotation': 1, 'OtherAnnotation': 0}
12:02:10 5 <class 'omero.model.TagAnnotationI'> added by training_user
12:02:10 Tag value: New Tag
12:02:10 6 <class 'omero.model.MapAnnotationI'> added by training_user
12:02:10
12:02:10 Creating an OriginalFile and FileAnnotation
12:02:10 Attaching FileAnnotation to Dataset: File ID: 7 , README.txt Size: 15
12:02:10
12:02:10 Annotations on Dataset: New Dataset
12:02:10 File ID: 134 README.txt Size: 15
12:02:10
12:02:10 Downloading file to /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/python/download/README.txt ...
12:02:10 File downloaded!
12:02:10 7 README.txt
12:02:10 Found Annotation with namespace: imperial.training.demo
12:02:10 Plane: 0 0 0
12:02:10 Applying channel Names: ['0', '1', '2'] Colors: [(255, 0, 0), (0, 255, 0), (0, 0, 255)]
12:02:10 [(0.0, 255.0), (0.0, 255.0), (0.0, 255.0)]
12:02:10
12:02:10 List Datasets:
12:02:10 ID: 8 Name: MyDataset
12:02:10 ID: 9 Name: MyDataset
12:02:10 ID: 10 Name: MyDataset
12:02:10
12:02:10 List Tags:
12:02:10 ID: 8 Text: MyTag Desc: MyTag 0
12:02:10 ID: 9 Text: MyTag Desc: MyTag 1
12:02:10 ID: 10 Text: MyTag Desc: MyTag 2
12:02:10 New dataset, Id: 11
12:02:10 New dataset 2, Id: 12
12:02:10 test&sizeT=10&sizeZ=5&sizeC=3.fake
12:02:10 Tile at zct tile: 2 0 0 (5, 5, 100, 100)
12:02:10 [[ 0 0 0 ... 102 103 104]
12:02:10 [ 0 0 0 ... 102 103 104]
12:02:10 [ 0 0 0 ... 102 103 104]
12:02:10 ...
12:02:10 [ 5 6 7 ... 102 103 104]
12:02:10 [ 5 6 7 ... 102 103 104]
12:02:10 [ 5 6 7 ... 102 103 104]]
12:02:10 shape: (100, 100)
12:02:10 min: 0 max: 104 pixel type: uint8
12:02:10 Average : 53.9125
12:02:10 Getting data for T, tile: 0 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 1 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 2 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 3 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 4 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 5 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 6 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 7 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 8 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 9 (256, 0, 10, 512)
12:02:10 kymograph_data (512, 100)
12:02:10 Attaching kymograph.png to image
12:02:10 test&sizeT=10&sizeZ=5&sizeC=3.fake
12:02:10 Tile at zct tile: 2 0 0 (5, 5, 100, 100)
12:02:10 [[ 0 0 0 ... 102 103 104]
12:02:10 [ 0 0 0 ... 102 103 104]
12:02:10 [ 0 0 0 ... 102 103 104]
12:02:10 ...
12:02:10 [ 5 6 7 ... 102 103 104]
12:02:10 [ 5 6 7 ... 102 103 104]
12:02:10 [ 5 6 7 ... 102 103 104]]
12:02:10 shape: (100, 100)
12:02:10 min: 0 max: 104 pixel type: uint8
12:02:10 Average : 53.9125
12:02:10 Getting data for T, tile: 0 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 1 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 2 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 3 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 4 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 5 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 6 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 7 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 8 (256, 0, 10, 512)
12:02:10 Getting data for T, tile: 9 (256, 0, 10, 512)
12:02:10 kymograph_data (512, 100)
12:02:10 Attaching kymograph.png to image
12:02:10 No file downloaded. Project not rated.
12:02:10 New image, Id: 12
12:02:10 Starting at: http://nginx/web/api/
12:02:10 CSRF token EBA1u1anjFc1aQBytNQW6pHeaeCBbju2
12:02:10 Servers:
12:02:10 -id: 1
12:02:10 name: omero
12:02:10 host: omero
12:02:10 port: 4064
12:02:10 -id: 2
12:02:10 name: testintegration
12:02:10 host: testintegration
12:02:10 port: 14064
12:02:10 eventContext {'sessionId': 56, 'sessionUuid': 'a06845e7-a0a0-4c15-9722-358ae6b3613a', 'userId': 2, 'userName': 'training_user', 'groupId': 3, 'groupName': 'training_group', 'isAdmin': False, 'eventId': -1, 'eventType': 'User', 'memberOfGroups': [3, 4, 1], 'leaderOfGroups': []}
12:02:10 Projects:
12:02:10 2 Project 0
12:02:10 3 Project 0
12:02:10 Created Project: 6 API TEST foo
12:02:10 {'data': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#Project', '@id': 6, 'omero:details': {'@type': 'TBD#Details', 'owner': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#Experimenter', '@id': 2, 'omero:details': {'@type': 'TBD#Details', 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rw----', 'canAnnotate': True, 'canDelete': False, 'canEdit': False, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': False, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'FirstName': 'training_user', 'MiddleName': '', 'LastName': 'training_user', 'Email': '', 'Institution': '', 'UserName': 'training_user'}, 'group': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#ExperimenterGroup', '@id': 3, 'omero:details': {'@type': 'TBD#Details', 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rwr---', 'canAnnotate': True, 'canDelete': False, 'canEdit': False, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': True, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'Name': 'training_group'}, 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rwr---', 'canAnnotate': True, 'canDelete': True, 'canEdit': True, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': True, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'Name': 'API TEST foo', 'url:datasets': 'http://nginx/web/api/v0/m/projects/6/datasets/'}}
12:02:12 !! 07/09/26 12:02:12.153 error: communicator not destroyed during global destruction.+ deactivate
12:02:12 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
12:02:12 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
12:02:12 + export PATH
12:02:12 + unset _OLD_VIRTUAL_PATH
12:02:12 + '[' -n '' ']'
12:02:12 + hash -r
12:02:12 + '[' -n '' ']'
12:02:12 + unset VIRTUAL_ENV
12:02:12 + unset VIRTUAL_ENV_PROMPT
12:02:12 + '[' '!' '' = nondestructive ']'
12:02:12 + unset -f deactivate
12:02:12 + cd /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/java/src
12:02:12 + javac --release 11 -cp '.:/home/omero/workspace/OMERO-training/OMERO.server/lib/client/*' training/CreateImage.java training/DeleteData.java training/HowToUseTables.java training/LoadMetadataAdvanced.java training/RawDataAccess.java training/ReadDataAdvanced.java training/ReadData.java training/RenderImages.java training/ROIFolders.java training/ROIs.java training/Setup.java training/Sudo.java training/WriteData.java
12:02:14 Note: Some input files use unchecked or unsafe operations.
12:02:14 Note: Recompile with -Xlint:unchecked for details.
12:02:14 + java -cp '.:/home/omero/workspace/OMERO-training/OMERO.server/lib/client/*' training/Setup
12:02:17 omero.cmd.Delete2Response@5ed731d0
12:02:18 omero.cmd.Delete2Response@58e6d4b8
12:02:18 one [class java.lang.String] 1.0 [class java.lang.Double]
12:02:18 two [class java.lang.String] 2.0 [class java.lang.Double]
12:02:18 three [class java.lang.String] 3.0 [class java.lang.Double]
12:02:18 -1.0
12:02:18 0
12:02:18 1
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12:02:20 253 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
12:02:20 254 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
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12:02:21 Project:1 Project 1
12:02:21 dataset:1 Dataset 1-1
12:02:21 dataset:2 Dataset 1-2
12:02:21 dataset:7 New Dataset
12:02:21 Project:2 Project 0
12:02:21 image:13 newImageFrom3
12:02:21 image:2 test.fake
12:02:21 image:12 New Image
12:02:21 5
12:02:21 10
12:02:21 3
12:02:21 512
12:02:21 512
12:02:21 screen:2 Screen
12:02:21 screen:1 Screen
12:02:21 plate:2 Plate Name 0
12:02:21 plate:1 Plate
12:02:21 well:2
12:02:21 well:3
12:02:21 well:1
12:02:21 plate:1
12:02:21 plate:3
12:02:21 plate:2
12:02:21
12:02:21 List Datasets:
12:02:21 ID: 8 Name: MyDataset
12:02:21 ID: 9 Name: MyDataset
12:02:21 ID: 10 Name: MyDataset
12:02:21 ID: 14 Name: MyDataset
12:02:21 ID: 15 Name: MyDataset
12:02:21 ID: 16 Name: MyDataset
12:02:21
12:02:21 List Tags:
12:02:21 ID: 16 NS: omero.training.demo
12:02:21 ID: 17 NS: omero.training.demo
12:02:21 ID: 18 NS: omero.training.demo
12:02:21 Dataset:8 MyDataset
12:02:21 Dataset:14 MyDataset
12:02:21 Dataset:15 MyDataset
12:02:21 Dataset:4 Orphaned dataset 2
12:02:21 Dataset:3 Orphaned dataset 1
12:02:21 Project:1 Project 1
12:02:21 Dataset:12 New Dataset2
12:02:21 Dataset:13 FileAnnotationDelete
12:02:21 Dataset:11 New Dataset
12:02:21 Dataset:16 MyDataset
12:02:21 Dataset:9 MyDataset
12:02:21 Dataset:10 MyDataset
12:02:21 Size:0
12:02:21 512 512
12:02:22 9
12:02:22 9
12:02:22 1
12:02:23 Logged in as ladmin_user
12:02:23 Added 'training_user's tag' to dataset MyDataset on behalf of training_user
12:02:23 Added 'ladmin_user's tag' to dataset MyDataset as admin.
12:02:23 Finished: SUCCESS
