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Started by upstream project "BIOFORMATS-test-repo" build number 77 originally caused by: Started by upstream project "Trigger" build number 85 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins8937389557452491450.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_11628_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:20:05,759 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:05,761 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:20:05,761 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:05,762 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:05,763 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:05,764 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:05,764 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:05,764 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:05,765 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:05,766 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:05,766 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:05,767 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:05,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:05,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:06,015 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:06,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:06,022 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:06,022 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:06,022 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:06,022 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:06,022 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:20:06,023 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:20:06,023 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 258 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-28 01:20:06,033] [main] java.version = 11.0.16 [testng] 01:20:06,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:06,036 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:06,096 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-28_01-20-06.log] [testng] 01:20:06,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-05-28 01:20:06,100] [main] testng.directory = /data [testng] [2024-05-28 01:20:06,100] [main] testng.configDirectory = /config [testng] [2024-05-28 01:20:06,111] [main] testng.multiplier = 1.0 [testng] [2024-05-28 01:20:06,113] [main] testng.in-memory = false [testng] [2024-05-28 01:20:06,113] [main] testng.allow-missing = false [testng] [2024-05-28 01:20:06,113] [main] user.language = en [testng] [2024-05-28 01:20:06,113] [main] user.country = ${user.country} [testng] [2024-05-28 01:20:06,113] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-28 01:20:20,808] [main] ---------------------------------------- [testng] [2024-05-28 01:20:20,808] [main] Total files: 283 [testng] [2024-05-28 01:20:20,808] [main] Scan time: 14.695 s (51 ms/file) [testng] [2024-05-28 01:20:20,808] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-28 01:28:45,848] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] 01:28:45,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:28:45,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:45,851 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-28_01-28-45.log] [testng] 01:28:45,852 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b988a4a - End of configuration. [testng] [2024-05-28 01:28:46,358] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] 01:28:46,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:28:46,359 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:46,359 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-28_01-28-46.log] [testng] 01:28:46,360 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f0cfc37 - End of configuration. [testng] [2024-05-28 01:28:46,487] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] 01:28:46,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:28:46,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:46,489 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-28_01-28-46.log] [testng] 01:28:46,489 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5521c7ef - End of configuration. [testng] [2024-05-28 01:28:46,711] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] 01:28:46,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:28:46,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:46,712 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-28_01-28-46.log] [testng] 01:28:46,712 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26c71d08 - End of configuration. [testng] [2024-05-28 01:28:46,817] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:28:46,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:28:46,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:46,818 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-28_01-28-46.log] [testng] 01:28:46,818 |-INFO in ch.qos.logback.core.sift.SiftProcessor@447f330b - End of configuration. [testng] [2024-05-28 01:28:46,852] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 01:28:46,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:28:46,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:46,853 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-28_01-28-46.log] [testng] 01:28:46,854 |-INFO in ch.qos.logback.core.sift.SiftProcessor@89e2763 - End of configuration. [testng] [2024-05-28 01:28:46,945] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] 01:28:46,945 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:28:46,945 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:46,946 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-28_01-28-46.log] [testng] 01:28:46,947 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c013dbb - End of configuration. [testng] [2024-05-28 01:28:47,156] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif: [testng] 01:28:47,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:28:47,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:47,158 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-28_01-28-47.log] [testng] 01:28:47,158 |-INFO in ch.qos.logback.core.sift.SiftProcessor@449a8550 - End of configuration. [testng] [2024-05-28 01:28:47,253] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] 01:28:47,253 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:28:47,253 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:47,254 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-28_01-28-47.log] [testng] 01:28:47,254 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55d59b97 - End of configuration. [testng] [2024-05-28 01:28:47,345] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] 01:28:47,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:28:47,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:47,346 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-28_01-28-47.log] [testng] 01:28:47,347 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cf367dc - End of configuration. [testng] [2024-05-28 01:28:50,520] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] 01:28:50,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:28:50,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:50,521 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-28_01-28-50.log] [testng] 01:28:50,521 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12d5052a - End of configuration. [testng] [2024-05-28 01:28:50,610] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] 01:28:50,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:28:50,611 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:28:50,611 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-28_01-28-50.log] [testng] 01:28:50,612 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6441ed2b - End of configuration. [testng] [2024-05-28 01:28:56,062] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-05-28 01:28:56,182] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-05-28 01:28:56,368] [pool-1-thread-12] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-05-28 01:28:56,563] [pool-1-thread-7] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-05-28 01:28:56,786] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-05-28 01:28:56,948] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-05-28 01:28:57,004] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-05-28 01:28:57,827] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-05-28 01:28:57,998] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-05-28 01:28:58,586] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-05-28 01:28:59,340] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-05-28 01:29:01,109] [pool-1-thread-12] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-05-28 01:29:01,362] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir: [testng] [2024-05-28 01:29:21,325] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-05-28 01:29:21,854] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-05-28 01:29:21,930] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-05-28 01:29:21,974] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-05-28 01:29:22,046] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-05-28 01:29:22,341] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-05-28 01:29:23,235] [pool-1-thread-1] Initializing /data/olympus/XYZt.vsi: [testng] [2024-05-28 01:29:23,545] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-05-28 01:29:23,800] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-05-28 01:29:24,178] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-05-28 01:29:24,573] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2024-05-28 01:29:24,660] [pool-1-thread-2] Initializing /data/qa-17270/stack1.oir: [testng] [2024-05-28 01:29:25,998] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-05-28 01:29:26,042] [pool-1-thread-6] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-05-28 01:29:30,454] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-05-28 01:29:30,686] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-05-28 01:29:30,947] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-05-28 01:29:31,085] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-05-28 01:29:31,515] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-05-28 01:29:31,847] [pool-1-thread-3] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-05-28 01:29:32,201] [pool-1-thread-5] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-05-28 01:29:32,427] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-05-28 01:29:32,482] [pool-1-thread-1] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-05-28 01:29:32,774] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-05-28 01:29:32,877] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-05-28 01:29:33,115] [pool-1-thread-8] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-05-28 01:29:33,843] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-05-28 01:29:34,007] [pool-1-thread-3] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-05-28 01:29:34,203] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] 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Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-05-28 01:29:46,230] [pool-1-thread-11] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2024-05-28 01:29:46,631] [pool-1-thread-2] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-05-28 01:29:47,313] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-05-28 01:29:47,367] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-05-28 01:29:47,560] [pool-1-thread-5] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-05-28 01:29:47,625] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-05-28 01:29:48,503] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-05-28 01:29:48,816] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-05-28 01:29:49,095] [pool-1-thread-8] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-05-28 01:29:50,212] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-05-28 01:29:50,285] [pool-1-thread-5] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-05-28 01:29:51,016] [pool-1-thread-11] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2024-05-28 01:29:51,696] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-05-28 01:29:55,732] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-05-28 01:29:55,779] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-05-28 01:29:55,927] [pool-1-thread-5] Initializing 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[pool-1-thread-4] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-05-28 01:31:48,327] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-05-28 01:31:48,439] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-05-28 01:31:49,252] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-05-28 01:31:49,569] [pool-1-thread-1] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-05-28 01:31:49,735] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-05-28 01:31:50,413] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-05-28 01:31:50,945] [pool-1-thread-11] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-05-28 01:31:51,286] [pool-1-thread-3] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-05-28 01:31:52,110] [pool-1-thread-1] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-05-28 01:31:52,778] [pool-1-thread-3] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-05-28 01:31:52,948] [pool-1-thread-11] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-05-28 01:31:53,763] [pool-1-thread-2] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-05-28 01:31:54,182] [pool-1-thread-3] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-05-28 01:31:54,350] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-05-28 01:31:54,457] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-05-28 01:31:55,579] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-05-28 01:31:55,867] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-05-28 01:31:56,183] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-05-28 01:31:56,679] [pool-1-thread-12] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-05-28 01:31:57,067] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-05-28 01:31:57,389] [pool-1-thread-11] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-05-28 01:31:57,633] [pool-1-thread-12] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-05-28 01:31:58,718] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-05-28 01:31:59,117] [pool-1-thread-2] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-05-28 01:31:59,567] [pool-1-thread-9] Initializing 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/data/qa-16871/XY_0003.ome.tif: [testng] [2024-05-28 01:32:02,637] [pool-1-thread-9] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-05-28 01:32:02,965] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-05-28 01:32:03,526] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-05-28 01:32:03,694] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-05-28 01:32:03,835] [pool-1-thread-9] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-05-28 01:32:04,164] [pool-1-thread-3] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-05-28 01:32:04,996] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-05-28 01:32:05,097] [pool-1-thread-1] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-05-28 01:32:05,717] [pool-1-thread-3] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-05-28 01:32:05,767] [pool-1-thread-11] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-05-28 01:32:06,247] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-05-28 01:32:06,338] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-05-28 01:32:07,081] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-05-28 01:32:07,686] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-05-28 01:32:08,009] [pool-1-thread-11] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-05-28 01:32:08,091] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-05-28 01:32:08,309] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2024-05-28 01:32:08,395] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-05-28 01:32:12,978] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-05-28 01:32:13,454] [pool-1-thread-1] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-05-28 01:32:13,737] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-05-28 01:32:13,961] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 47 minutes 20 seconds Finished: SUCCESS