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Started by upstream project "BIOFORMATS-test-repo" build number 77 originally caused by: Started by upstream project "Trigger" build number 85 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins6226883156796627063.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_11629_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:20:07,692 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:07,694 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:20:07,694 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:07,695 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:07,696 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:07,696 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:07,697 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:07,697 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:07,697 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:07,698 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:07,698 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:07,699 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:07,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:07,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:07,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:07,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:07,949 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:07,950 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:07,950 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:07,950 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:07,950 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:20:07,952 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:20:07,952 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 255 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-05-28 01:20:07,966] [main] java.version = 11.0.16 [testng] 01:20:07,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:07,970 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:08,025 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-05-28_01-20-07.log] [testng] 01:20:08,026 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-05-28 01:20:08,029] [main] testng.directory = /data [testng] [2024-05-28 01:20:08,029] [main] testng.configDirectory = /config [testng] [2024-05-28 01:20:08,041] [main] testng.multiplier = 1.0 [testng] [2024-05-28 01:20:08,043] [main] testng.in-memory = false [testng] [2024-05-28 01:20:08,043] [main] testng.allow-missing = false [testng] [2024-05-28 01:20:08,043] [main] user.language = en [testng] [2024-05-28 01:20:08,044] [main] user.country = ${user.country} [testng] [2024-05-28 01:20:08,044] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-05-28 01:20:19,514] [main] ---------------------------------------- [testng] [2024-05-28 01:20:19,515] [main] Total files: 4424 [testng] [2024-05-28 01:20:19,516] [main] Scan time: 11.47 s (2 ms/file) [testng] [2024-05-28 01:20:19,516] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-05-28 01:22:30,511] [pool-1-thread-1] Initializing /data/bene/3d-example-stack.tif: [testng] 01:22:30,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:22:30,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:30,517 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-05-28_01-22-30.log] [testng] 01:22:30,518 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f85bdec - End of configuration. [testng] [2024-05-28 01:22:30,604] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] 01:22:30,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:22:30,604 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:30,605 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-05-28_01-22-30.log] [testng] 01:22:30,605 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f333700 - End of configuration. [testng] [2024-05-28 01:22:30,640] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x64.tiff: [testng] 01:22:30,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:22:30,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:30,641 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-05-28_01-22-30.log] [testng] 01:22:30,642 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60834fd1 - End of configuration. [testng] [2024-05-28 01:22:30,668] [pool-1-thread-10] Initializing /data/josiah/cell-Z10.C1.tiff: [testng] 01:22:30,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:22:30,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:30,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-05-28_01-22-30.log] [testng] 01:22:30,670 |-INFO in ch.qos.logback.core.sift.SiftProcessor@585593c0 - End of configuration. [testng] [2024-05-28 01:22:30,722] [pool-1-thread-9] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] 01:22:30,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:22:30,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:30,723 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-05-28_01-22-30.log] [testng] 01:22:30,724 |-INFO in ch.qos.logback.core.sift.SiftProcessor@300835e - End of configuration. [testng] [2024-05-28 01:22:30,768] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] 01:22:30,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:22:30,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:30,769 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-05-28_01-22-30.log] [testng] 01:22:30,769 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3028f7b0 - End of configuration. [testng] [2024-05-28 01:22:30,845] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] 01:22:30,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:22:30,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:30,846 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-05-28_01-22-30.log] [testng] 01:22:30,847 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60277a36 - End of configuration. [testng] [2024-05-28 01:22:30,888] [pool-1-thread-6] Initializing /data/christine/Image5D_4color test stack/RGB from I5D.tif: [testng] 01:22:30,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:22:30,889 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:30,890 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-05-28_01-22-30.log] [testng] 01:22:30,890 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f7dd265 - End of configuration. [testng] [2024-05-28 01:22:30,956] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] 01:22:30,956 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:22:30,956 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:30,957 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-05-28_01-22-30.log] [testng] 01:22:30,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@248b2d60 - End of configuration. [testng] [2024-05-28 01:22:31,035] [pool-1-thread-4] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] 01:22:31,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:22:31,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:31,036 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-05-28_01-22-31.log] [testng] 01:22:31,036 |-INFO in ch.qos.logback.core.sift.SiftProcessor@379335d9 - End of configuration. [testng] [2024-05-28 01:22:31,079] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] 01:22:31,079 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:22:31,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:31,080 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-05-28_01-22-31.log] [testng] 01:22:31,081 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e177fd8 - End of configuration. [testng] [2024-05-28 01:22:31,125] [pool-1-thread-2] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] 01:22:31,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:22:31,126 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:31,126 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-05-28_01-22-31.log] [testng] 01:22:31,127 |-INFO in ch.qos.logback.core.sift.SiftProcessor@301ed043 - End of configuration. [testng] [2024-05-28 01:22:35,478] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z025.tif: [testng] [2024-05-28 01:22:35,609] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-05-28 01:22:35,925] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z048.tif: [testng] [2024-05-28 01:22:35,948] [pool-1-thread-7] Initializing /data/brian/MFGTMP_080902150001t001B02f73d2.TIF: [testng] [2024-05-28 01:22:35,988] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z034.tif: [testng] [2024-05-28 01:22:36,009] [pool-1-thread-9] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-05-28 01:22:36,073] [pool-1-thread-3] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-05-28 01:22:36,256] [pool-1-thread-6] Initializing /data/alexa/test4.tif: [testng] [2024-05-28 01:22:36,280] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z011.tif: [testng] [2024-05-28 01:22:36,305] [pool-1-thread-8] Initializing /data/ascb/FND-13_PorterFranziniTransverse_4800.tif: [testng] [2024-05-28 01:22:39,060] [pool-1-thread-5] Initializing /data/ascb/CYT-31_FriendOsmium_4800.tif: [testng] [2024-05-28 01:22:39,442] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-05-28 01:22:39,546] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-05-28 01:22:39,622] [pool-1-thread-1] Initializing /data/jonathan/XSEC-02.TIF: [testng] [2024-05-28 01:22:39,683] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-05-28 01:22:39,930] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z054.tif: [testng] [2024-05-28 01:22:40,005] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-05-28 01:22:40,045] [pool-1-thread-6] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-05-28 01:22:40,438] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-05-28 01:22:40,507] [pool-1-thread-10] Initializing /data/damian/21m.tiff: [testng] [2024-05-28 01:22:40,605] [pool-1-thread-7] Initializing /data/public/condensation/C4.pattern3.tif: [testng] [2024-05-28 01:22:40,649] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z038.tif: [testng] [2024-05-28 01:22:40,671] [pool-1-thread-1] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-05-28 01:22:41,056] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-05-28 01:22:41,092] [pool-1-thread-3] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-05-28 01:22:41,375] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-05-28 01:22:41,408] [pool-1-thread-6] Initializing /data/public/condensation/E4.pattern5.tif: [testng] [2024-05-28 01:22:42,085] [pool-1-thread-11] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-05-28 01:22:42,172] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z027.tif: [testng] [2024-05-28 01:22:42,225] [pool-1-thread-7] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-05-28 01:22:42,295] [pool-1-thread-9] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-05-28 01:22:42,327] [pool-1-thread-1] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-05-28 01:22:42,662] [pool-1-thread-4] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-05-28 01:22:42,862] [pool-1-thread-12] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-05-28 01:22:42,967] [pool-1-thread-6] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-05-28 01:22:43,485] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0258.TIF: [testng] [2024-05-28 01:22:43,558] [pool-1-thread-9] Initializing 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Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x64.tiff: [testng] [2024-05-28 01:24:41,731] [pool-1-thread-12] Initializing /data/lzw/test.tif: [testng] [2024-05-28 01:24:41,897] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-05-28 01:24:41,940] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] [2024-05-28 01:24:42,027] [pool-1-thread-5] Initializing /data/josh/ZProjection of stack.tif: [testng] [2024-05-28 01:24:42,071] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-05-28 01:24:42,105] [pool-1-thread-1] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-05-28 01:24:44,791] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-05-28 01:24:44,887] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-05-28 01:24:44,943] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-05-28 01:24:45,041] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-05-28 01:24:45,423] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-05-28 01:24:45,455] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z013.tif: [testng] [2024-05-28 01:24:45,584] [pool-1-thread-2] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-05-28 01:24:45,800] [pool-1-thread-5] Initializing /data/josiah/cell-Z7.C0.tiff: [testng] [2024-05-28 01:24:45,968] [pool-1-thread-10] Initializing /data/josh/NESb_C2_TP1.tiff: [testng] [2024-05-28 01:24:46,091] [pool-1-thread-12] Initializing /data/josiah/cell-Z18.C0.tiff: [testng] [2024-05-28 01:24:46,140] [pool-1-thread-6] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-05-28 01:24:46,184] [pool-1-thread-9] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-05-28 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01:24:47,626] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-05-28 01:24:47,845] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z018.tif: [testng] [2024-05-28 01:24:48,072] [pool-1-thread-2] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-05-28 01:24:48,192] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z017.tif: [testng] [2024-05-28 01:24:48,213] [pool-1-thread-12] Initializing /data/misc/ms-paint.png: [testng] [2024-05-28 01:24:48,380] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-05-28 01:24:48,766] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z015.tif: [testng] [2024-05-28 01:24:48,858] [pool-1-thread-10] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-05-28 01:24:49,144] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-05-28 01:24:49,309] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] [2024-05-28 01:24:49,353] [pool-1-thread-12] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-05-28 01:24:49,588] [pool-1-thread-2] Initializing /data/damian/18m.tiff: [testng] [2024-05-28 01:24:49,783] [pool-1-thread-5] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-05-28 01:24:50,049] [pool-1-thread-2] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-05-28 01:24:50,285] [pool-1-thread-10] Initializing /data/big-images/2kx2k.tif: [testng] [2024-05-28 01:24:50,506] [pool-1-thread-2] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-05-28 01:24:50,598] [pool-1-thread-5] Initializing /data/jeff/test36b.tif: [testng] [2024-05-28 01:24:50,825] [pool-1-thread-5] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-05-28 01:24:51,237] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-05-28 01:24:51,424] [pool-1-thread-2] Initializing /data/stephane/P014.tif: [testng] [2024-05-28 01:24:51,524] [pool-1-thread-5] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-05-28 01:24:52,110] [pool-1-thread-4] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-05-28 01:24:52,194] [pool-1-thread-2] Initializing /data/curtis/test1.tiff: [testng] [2024-05-28 01:24:52,288] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-05-28 01:24:52,656] [pool-1-thread-2] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-05-28 01:24:52,725] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z005.tif: [testng] [2024-05-28 01:24:52,804] [pool-1-thread-10] Initializing /data/edward/TestDoc2.tif: [testng] [2024-05-28 01:24:52,941] [pool-1-thread-4] Initializing /data/public/condensation/C4.pattern8.tif: [testng] [2024-05-28 01:24:53,007] [pool-1-thread-5] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-05-28 01:24:53,385] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-05-28 01:24:53,587] [pool-1-thread-2] Initializing /data/martin/head.tif: [testng] [2024-05-28 01:24:53,629] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-05-28 01:24:54,448] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-05-28 01:24:54,701] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-05-28 01:24:54,782] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-05-28 01:24:54,985] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0233.TIF: [testng] [2024-05-28 01:24:55,068] [pool-1-thread-4] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-05-28 01:24:55,142] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-05-28 01:24:55,335] [pool-1-thread-5] Initializing 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Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-05-28 01:24:58,701] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z047.tif: [testng] [2024-05-28 01:24:58,738] [pool-1-thread-10] Initializing /data/ascb/FND-25_PaladeGroup_4800.tif: [testng] [2024-05-28 01:24:58,786] [pool-1-thread-8] Initializing /data/ascb/CYT-93_PasolliMouse1c_4800.tif: [testng] [2024-05-28 01:24:59,045] [pool-1-thread-5] Initializing /data/josiah/cell-Z26.C1.tiff: [testng] [2024-05-28 01:24:59,449] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-05-28 01:24:59,479] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-05-28 01:24:59,730] [pool-1-thread-5] Initializing /data/samples/cielab/Ski_TC8-03_ROMM_lab.tif: [testng] [2024-05-28 01:25:00,068] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z042.tif: [testng] [2024-05-28 01:25:00,158] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z010.tif: [testng] [2024-05-28 01:25:00,663] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-05-28 01:25:00,898] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-05-28 01:25:01,162] [pool-1-thread-2] Initializing /data/curtis/clown.tif: [testng] [2024-05-28 01:25:01,395] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-05-28 01:25:01,648] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-05-28 01:25:01,788] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-05-28 01:25:01,979] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z001.tif: [testng] [2024-05-28 01:25:02,039] [pool-1-thread-2] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-05-28 01:25:02,423] [pool-1-thread-4] Initializing /data/misc/mri-stack.tif: [testng] [2024-05-28 01:25:02,531] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z060.tif: [testng] [2024-05-28 01:25:02,998] [pool-1-thread-3] Initializing /data/john/C100915-MA_AXIS_LEH_IMAGE_KIND_FLAT_ICE_3.tif: [testng] [2024-05-28 01:25:03,130] [pool-1-thread-4] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-05-28 01:25:03,296] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z042.tif: [testng] [2024-05-28 01:25:03,638] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-05-28 01:25:03,671] [pool-1-thread-4] Initializing /data/ascb/CYT-149_Fader_Fusion.tif: [testng] [2024-05-28 01:25:03,935] [pool-1-thread-2] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-05-28 01:25:04,344] [pool-1-thread-3] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-05-28 01:25:04,491] [pool-1-thread-2] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-05-28 01:25:05,250] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] [2024-05-28 01:25:05,490] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-05-28 01:25:05,705] [pool-1-thread-6] Initializing /data/josiah/cell-Z12.C0.tiff: [testng] [2024-05-28 01:25:06,297] [pool-1-thread-6] Initializing /data/curtis/images24.tiff: [testng] [2024-05-28 01:25:06,403] [pool-1-thread-2] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-05-28 01:25:06,823] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs000.TIF: [testng] [2024-05-28 01:25:06,996] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-05-28 01:25:07,112] [pool-1-thread-10] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-05-28 01:25:07,302] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-05-28 01:25:07,472] [pool-1-thread-8] Initializing /data/jay/Cleared%2fStack.tif: [testng] [2024-05-28 01:25:07,585] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-05-28 01:25:07,716] [pool-1-thread-2] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] [2024-05-28 01:25:07,761] [pool-1-thread-3] Initializing /data/public/condensation/E4.pattern8.tif: [testng] [2024-05-28 01:25:08,152] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 36 seconds Finished: SUCCESS