Started by upstream project "BIOFORMATS-test-repo" build number 93 originally caused by: Started by upstream project "Trigger" build number 104 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins10297554360980924504.sh + '[' hitachi = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_14257_merge_ci -v /uod/idr/repos/curated/hitachi:/data -v /uod/idr-scratch/merge-ci/curated/hitachi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:21:39,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:39,356 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:39,380 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:39,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:39,388 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:39,388 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:39,388 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:39,389 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:39,389 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@41a0aa7d - End of configuration. [testng] 01:21:39,389 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6574a52c - Registering current configuration as safe fallback point [testng] 01:21:39,390 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6c1a5b54 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 386 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-15 01:21:39,399] [main] java.version = 11.0.16 [testng] 01:21:39,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:39,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:39,468 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-15_01-21-39.log] [testng] 01:21:39,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-06-15 01:21:39,487] [main] testng.directory = /data [testng] [2024-06-15 01:21:39,488] [main] testng.configDirectory = /config [testng] [2024-06-15 01:21:39,522] [main] testng.multiplier = 1.0 [testng] [2024-06-15 01:21:39,524] [main] testng.in-memory = false [testng] [2024-06-15 01:21:39,524] [main] testng.allow-missing = false [testng] [2024-06-15 01:21:39,524] [main] user.language = en [testng] [2024-06-15 01:21:39,524] [main] user.country = ${user.country} [testng] [2024-06-15 01:21:39,524] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-06-15 01:21:41,201] [main] ---------------------------------------- [testng] [2024-06-15 01:21:41,201] [main] Total files: 21 [testng] [2024-06-15 01:21:41,201] [main] Scan time: 1.676 s (79 ms/file) [testng] [2024-06-15 01:21:41,202] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 18 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-15 01:21:43,171] [pool-1-thread-1] Initializing /data/stefan/001_q15.txt: [testng] 01:21:43,172 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:43,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-15_01-21-43.log] [testng] 01:21:43,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b285333 - End of configuration. [testng] [2024-06-15 01:21:43,234] [pool-1-thread-12] Initializing /data/stefan/001_q10.txt: [testng] 01:21:43,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:43,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,236 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-15_01-21-43.log] [testng] 01:21:43,236 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3268fd3a - End of configuration. [testng] [2024-06-15 01:21:43,332] [pool-1-thread-11] Initializing /data/stefan/001_q03.txt: [testng] 01:21:43,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:43,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,333 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-15_01-21-43.log] [testng] 01:21:43,333 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fb87633 - End of configuration. [testng] [2024-06-15 01:21:43,366] [pool-1-thread-10] Initializing /data/stefan/001_q16.txt: [testng] 01:21:43,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:21:43,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,367 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-15_01-21-43.log] [testng] 01:21:43,367 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e893b51 - End of configuration. [testng] [2024-06-15 01:21:43,408] [pool-1-thread-9] Initializing /data/stefan/001_q11.txt: [testng] 01:21:43,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:21:43,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,409 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-15_01-21-43.log] [testng] 01:21:43,409 |-INFO in ch.qos.logback.core.sift.SiftProcessor@567859b9 - End of configuration. [testng] [2024-06-15 01:21:43,502] [pool-1-thread-8] Initializing /data/stefan/001_q02.txt: [testng] 01:21:43,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:21:43,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-15_01-21-43.log] [testng] 01:21:43,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@708a47b3 - End of configuration. [testng] [2024-06-15 01:21:43,536] [pool-1-thread-7] Initializing /data/stefan/001_q04.txt: [testng] 01:21:43,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:21:43,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,537 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-15_01-21-43.log] [testng] 01:21:43,537 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70bd121 - End of configuration. [testng] [2024-06-15 01:21:43,567] [pool-1-thread-6] Initializing /data/stefan/001_q12.txt: [testng] 01:21:43,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:21:43,567 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,568 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-15_01-21-43.log] [testng] 01:21:43,568 |-INFO in ch.qos.logback.core.sift.SiftProcessor@638c923d - End of configuration. [testng] [2024-06-15 01:21:43,658] [pool-1-thread-5] Initializing /data/stefan/001_q06.txt: [testng] 01:21:43,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:21:43,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,659 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-15_01-21-43.log] [testng] 01:21:43,660 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79561475 - End of configuration. [testng] [2024-06-15 01:21:43,696] [pool-1-thread-4] Initializing /data/stefan/001_q05.txt: [testng] 01:21:43,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:21:43,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,697 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-15_01-21-43.log] [testng] 01:21:43,698 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3761dadb - End of configuration. [testng] [2024-06-15 01:21:43,727] [pool-1-thread-3] Initializing /data/stefan/001_q14.txt: [testng] 01:21:43,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:43,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,729 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-15_01-21-43.log] [testng] 01:21:43,729 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30376c56 - End of configuration. [testng] [2024-06-15 01:21:43,771] [pool-1-thread-2] Initializing /data/stefan/001_q18.txt: [testng] 01:21:43,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:43,771 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,772 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-15_01-21-43.log] [testng] 01:21:43,773 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f25a1fa - End of configuration. [testng] [2024-06-15 01:21:46,293] [pool-1-thread-10] Initializing /data/stefan/001_q17.txt: [testng] [2024-06-15 01:21:46,366] [pool-1-thread-8] Initializing /data/stefan/001_q01.txt: [testng] [2024-06-15 01:21:46,387] [pool-1-thread-11] Initializing /data/stefan/001_q09.txt: [testng] [2024-06-15 01:21:46,460] [pool-1-thread-1] Initializing /data/stefan/001_q13.txt: [testng] [2024-06-15 01:21:46,497] [pool-1-thread-3] Initializing /data/stefan/001_q08.txt: [testng] [2024-06-15 01:21:46,555] [pool-1-thread-12] Initializing /data/stefan/001_q07.txt: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 954, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 14 seconds Finished: SUCCESS