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Started by upstream project "BIOFORMATS-test-repo" build number 99 originally caused by: Started by upstream project "Trigger" build number 110 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins12574108861310307018.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_15236_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:22:50,007 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - No custom configurators were discovered as a service. [testng] 01:22:50,007 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:50,008 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:50,009 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:22:50,009 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:22:50,009 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:22:50,009 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:50,010 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:50,010 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:22:50,010 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:22:50,010 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:50,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:50,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:50,397 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:50,397 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:50,411 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:50,411 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:50,411 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:50,412 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:50,412 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:22:50,413 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:22:50,413 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6b4a4e18 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 403 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-21 01:22:50,426] [main] java.version = 1.8.0_342 [testng] 01:22:50,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:50,432 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:50,502 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-21_01-22-50.log] [testng] 01:22:50,505 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-06-21 01:22:50,508] [main] testng.directory = /data [testng] [2024-06-21 01:22:50,508] [main] testng.configDirectory = /config [testng] [2024-06-21 01:22:50,524] [main] testng.multiplier = 1.0 [testng] [2024-06-21 01:22:50,524] [main] testng.in-memory = false [testng] [2024-06-21 01:22:50,524] [main] testng.allow-missing = false [testng] [2024-06-21 01:22:50,524] [main] user.language = en [testng] [2024-06-21 01:22:50,524] [main] user.country = ${user.country} [testng] [2024-06-21 01:22:50,524] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-06-21 01:23:09,830] [main] ---------------------------------------- [testng] [2024-06-21 01:23:09,830] [main] Total files: 283 [testng] [2024-06-21 01:23:09,830] [main] Scan time: 19.305 s (68 ms/file) [testng] [2024-06-21 01:23:09,830] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-21 01:32:14,982] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] 01:32:14,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:32:14,982 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:14,984 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-21_01-32-14.log] [testng] 01:32:14,984 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fa22edd - End of configuration. [testng] [2024-06-21 01:32:15,060] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] 01:32:15,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:32:15,061 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:15,062 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-21_01-32-15.log] [testng] 01:32:15,062 |-INFO in ch.qos.logback.core.sift.SiftProcessor@622f092b - End of configuration. [testng] [2024-06-21 01:32:15,154] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-1.tif: [testng] 01:32:15,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:32:15,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:15,155 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-21_01-32-15.log] [testng] 01:32:15,155 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54554fc0 - End of configuration. [testng] [2024-06-21 01:32:15,219] [pool-1-thread-10] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] 01:32:15,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:32:15,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:15,220 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-21_01-32-15.log] [testng] 01:32:15,221 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48eed08 - End of configuration. [testng] [2024-06-21 01:32:16,025] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] 01:32:16,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:32:16,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:16,026 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-21_01-32-16.log] [testng] 01:32:16,026 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a557b3 - End of configuration. [testng] [2024-06-21 01:32:16,088] [pool-1-thread-8] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] 01:32:16,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:32:16,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:16,089 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-21_01-32-16.log] [testng] 01:32:16,090 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52065f9 - End of configuration. [testng] [2024-06-21 01:32:16,157] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] 01:32:16,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:32:16,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:16,158 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-21_01-32-16.log] [testng] 01:32:16,158 |-INFO in ch.qos.logback.core.sift.SiftProcessor@202d71ce - End of configuration. [testng] [2024-06-21 01:32:16,245] [pool-1-thread-6] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] 01:32:16,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:32:16,246 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:16,246 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-21_01-32-16.log] [testng] 01:32:16,247 |-INFO in ch.qos.logback.core.sift.SiftProcessor@566a85f5 - End of configuration. [testng] [2024-06-21 01:32:16,343] [pool-1-thread-5] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] 01:32:16,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:32:16,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:16,344 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-21_01-32-16.log] [testng] 01:32:16,344 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30ac7ec3 - End of configuration. [testng] [2024-06-21 01:32:16,711] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] 01:32:16,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:32:16,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:16,712 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-21_01-32-16.log] [testng] 01:32:16,712 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cd899ee - End of configuration. [testng] [2024-06-21 01:32:16,799] [pool-1-thread-3] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:32:16,799 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:32:16,799 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:16,800 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-21_01-32-16.log] [testng] 01:32:16,800 |-INFO in ch.qos.logback.core.sift.SiftProcessor@514abdf8 - End of configuration. [testng] [2024-06-21 01:32:16,830] [pool-1-thread-2] Initializing /data/qa-17331/60x zstack RS.oir: [testng] 01:32:16,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:32:16,830 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:16,831 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-21_01-32-16.log] [testng] 01:32:16,831 |-INFO in ch.qos.logback.core.sift.SiftProcessor@507a8f02 - End of configuration. [testng] [2024-06-21 01:32:19,895] [pool-1-thread-12] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-06-21 01:32:20,243] [pool-1-thread-1] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-06-21 01:32:20,309] [pool-1-thread-8] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-06-21 01:32:20,422] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2024-06-21 01:32:20,470] [pool-1-thread-6] Initializing /data/olympus/XYZt.vsi: [testng] [2024-06-21 01:32:20,507] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-06-21 01:32:21,081] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-06-21 01:32:21,136] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-06-21 01:32:21,653] [pool-1-thread-2] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-06-21 01:32:21,993] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-06-21 01:32:22,680] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-06-21 01:32:22,789] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2024-06-21 01:32:27,894] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-06-21 01:32:27,990] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-06-21 01:32:28,055] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-06-21 01:32:28,314] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-06-21 01:32:28,879] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-06-21 01:32:29,184] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-06-21 01:32:29,603] [pool-1-thread-2] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-06-21 01:32:29,852] [pool-1-thread-7] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-06-21 01:32:30,047] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-06-21 01:32:30,222] [pool-1-thread-5] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-06-21 01:32:30,748] [pool-1-thread-6] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-06-21 01:32:30,884] [pool-1-thread-8] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-06-21 01:32:31,068] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2024-06-21 01:32:31,647] [pool-1-thread-7] Initializing /data/qa-17922/example_multipart.oir: [testng] [2024-06-21 01:32:59,577] [pool-1-thread-3] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-06-21 01:33:00,169] [pool-1-thread-5] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-06-21 01:33:02,488] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-06-21 01:33:02,562] [pool-1-thread-6] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-06-21 01:33:02,909] [pool-1-thread-8] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-06-21 01:33:03,205] [pool-1-thread-2] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-06-21 01:33:03,474] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-06-21 01:33:03,747] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2024-06-21 01:33:03,939] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-06-21 01:33:04,189] [pool-1-thread-3] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: [testng] [2024-06-21 01:33:04,807] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2024-06-21 01:33:05,099] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-06-21 01:33:06,665] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-06-21 01:33:06,775] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-06-21 01:33:06,840] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-06-21 01:33:07,497] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-06-21 01:33:07,583] 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01:35:01,327] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] [2024-06-21 01:35:02,429] [pool-1-thread-1] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-06-21 01:35:03,305] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-06-21 01:35:03,456] [pool-1-thread-8] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-06-21 01:35:03,814] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2024-06-21 01:35:04,711] [pool-1-thread-3] Initializing /data/qa-17917/f10010.oir: [testng] [2024-06-21 01:35:53,397] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2024-06-21 01:35:53,681] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-06-21 01:35:57,332] [pool-1-thread-10] Initializing 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[2024-06-21 01:36:19,119] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2024-06-21 01:36:20,383] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-06-21 01:36:38,918] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2024-06-21 01:36:48,822] [pool-1-thread-12] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-06-21 01:36:54,003] [pool-1-thread-1] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-06-21 01:36:55,188] [pool-1-thread-1] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-06-21 01:36:56,416] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-06-21 01:36:57,284] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-06-21 01:36:59,215] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-06-21 01:37:00,517] [pool-1-thread-11] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-06-21 01:37:04,418] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-06-21 01:37:04,772] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-06-21 01:37:14,468] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-06-21 01:37:15,816] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-06-21 01:37:16,260] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-06-21 01:37:17,105] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-06-21 01:37:17,403] [pool-1-thread-2] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-06-21 01:37:18,268] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-06-21 01:37:19,593] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-06-21 01:37:20,780] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-06-21 01:37:20,912] [pool-1-thread-5] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-06-21 01:37:22,298] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-06-21 01:37:23,094] [pool-1-thread-1] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-06-21 01:37:23,360] [pool-1-thread-5] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-06-21 01:37:26,449] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-06-21 01:37:27,304] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-06-21 01:37:28,454] [pool-1-thread-2] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-06-21 01:37:28,627] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-06-21 01:37:29,714] [pool-1-thread-2] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-06-21 01:37:34,070] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2024-06-21 01:37:35,236] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2024-06-21 01:37:36,176] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-06-21 01:37:37,290] [pool-1-thread-12] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-06-21 01:39:40,346] [pool-1-thread-5] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-06-21 01:40:09,112] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2024-06-21 01:40:09,869] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-06-21 01:40:11,100] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-06-21 01:40:12,836] [pool-1-thread-1] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2024-06-21 01:40:14,127] [pool-1-thread-1] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-06-21 01:40:15,537] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-06-21 01:40:16,362] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-06-21 01:40:17,658] [pool-1-thread-1] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-06-21 01:40:20,899] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-06-21 01:40:33,731] [pool-1-thread-2] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-06-21 01:40:35,241] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-06-21 01:40:35,792] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-06-21 01:40:36,528] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-06-21 01:40:37,107] [pool-1-thread-1] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-06-21 01:40:39,022] [pool-1-thread-2] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-06-21 01:40:40,202] [pool-1-thread-2] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-06-21 01:40:41,156] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-06-21 01:40:46,287] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-06-21 01:40:47,300] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] [2024-06-21 01:40:48,498] [pool-1-thread-2] Initializing /data/qa-16871/Clipboard.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 65 minutes 50 seconds Finished: SUCCESS