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Started by upstream project "BIOFORMATS-test-repo" build number 99 originally caused by: Started by upstream project "Trigger" build number 110 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins15141107764779176514.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_15237_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:22:50,922 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:22:50,925 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:22:50,925 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:50,926 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:50,926 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:22:50,926 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:22:50,927 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:22:50,927 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:50,928 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:50,928 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:22:50,928 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:22:50,928 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:51,230 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:51,230 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:51,266 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:51,266 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:51,283 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:51,283 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:51,283 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:51,284 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:51,284 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:22:51,285 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:22:51,285 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 357 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-21 01:22:51,298] [main] java.version = 1.8.0_342 [testng] 01:22:51,302 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:51,302 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:51,357 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-21_01-22-51.log] [testng] 01:22:51,359 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-06-21 01:22:51,362] [main] testng.directory = /data [testng] [2024-06-21 01:22:51,363] [main] testng.configDirectory = /config [testng] [2024-06-21 01:22:51,377] [main] testng.multiplier = 1.0 [testng] [2024-06-21 01:22:51,378] [main] testng.in-memory = false [testng] [2024-06-21 01:22:51,378] [main] testng.allow-missing = false [testng] [2024-06-21 01:22:51,378] [main] user.language = en [testng] [2024-06-21 01:22:51,378] [main] user.country = ${user.country} [testng] [2024-06-21 01:22:51,378] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-06-21 01:22:59,126] [main] ---------------------------------------- [testng] [2024-06-21 01:22:59,126] [main] Total files: 4424 [testng] [2024-06-21 01:22:59,126] [main] Scan time: 7.748 s (1 ms/file) [testng] [2024-06-21 01:22:59,127] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-21 01:25:06,377] [pool-1-thread-1] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] 01:25:06,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:25:06,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,380 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-21_01-25-06.log] [testng] 01:25:06,380 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18b3c53e - End of configuration. [testng] [2024-06-21 01:25:06,444] [pool-1-thread-12] Initializing /data/wayne/apple.tif: [testng] 01:25:06,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:25:06,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,445 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-21_01-25-06.log] [testng] 01:25:06,445 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78356a44 - End of configuration. [testng] [2024-06-21 01:25:06,470] [pool-1-thread-11] Initializing /data/josiah/cell-Z31.C0.tiff: [testng] 01:25:06,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:25:06,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,472 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-21_01-25-06.log] [testng] 01:25:06,472 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18933449 - End of configuration. [testng] [2024-06-21 01:25:06,504] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z010.tif: [testng] 01:25:06,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:25:06,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,505 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-21_01-25-06.log] [testng] 01:25:06,505 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5bf44e1b - End of configuration. [testng] [2024-06-21 01:25:06,532] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z000.tif: [testng] 01:25:06,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:25:06,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,533 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-21_01-25-06.log] [testng] 01:25:06,533 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f20dd34 - End of configuration. [testng] [2024-06-21 01:25:06,566] [pool-1-thread-8] Initializing /data/josiah/cell-Z32.C0.tiff: [testng] 01:25:06,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:25:06,566 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,567 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-21_01-25-06.log] [testng] 01:25:06,568 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d5d52ab - End of configuration. [testng] [2024-06-21 01:25:06,597] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] 01:25:06,598 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:25:06,598 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,598 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-21_01-25-06.log] [testng] 01:25:06,599 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22592e2b - End of configuration. [testng] [2024-06-21 01:25:06,632] [pool-1-thread-6] Initializing /data/public/libtiff/caspian.tif: [testng] 01:25:06,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:25:06,632 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,633 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-21_01-25-06.log] [testng] 01:25:06,634 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a292746 - End of configuration. [testng] [2024-06-21 01:25:06,665] [pool-1-thread-5] Initializing /data/misc/9 h test.tif: [testng] 01:25:06,665 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:25:06,665 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,666 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-21_01-25-06.log] [testng] 01:25:06,666 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51832580 - End of configuration. [testng] [2024-06-21 01:25:06,692] [pool-1-thread-4] Initializing /data/public/condensation/A1.pattern1.tif: [testng] 01:25:06,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:25:06,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,693 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-21_01-25-06.log] [testng] 01:25:06,694 |-INFO in ch.qos.logback.core.sift.SiftProcessor@594dd319 - End of configuration. [testng] [2024-06-21 01:25:06,766] [pool-1-thread-3] Initializing /data/ascb/CYT-93_PasolliMouse1c_4800.tif: [testng] 01:25:06,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:25:06,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,768 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-21_01-25-06.log] [testng] 01:25:06,768 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35898551 - End of configuration. [testng] [2024-06-21 01:25:06,817] [pool-1-thread-2] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] 01:25:06,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:25:06,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:06,818 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-21_01-25-06.log] [testng] 01:25:06,818 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1219b5bd - End of configuration. [testng] [2024-06-21 01:25:09,614] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z033.tif: [testng] [2024-06-21 01:25:09,641] [pool-1-thread-6] Initializing /data/josiah/cell-Z28.C0.tiff: [testng] [2024-06-21 01:25:09,666] [pool-1-thread-8] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-06-21 01:25:09,723] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x32.tiff: [testng] [2024-06-21 01:25:09,742] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0222.TIF: [testng] [2024-06-21 01:25:09,793] [pool-1-thread-7] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-06-21 01:25:09,840] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] [2024-06-21 01:25:09,889] [pool-1-thread-12] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-06-21 01:25:09,959] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z007.tif: [testng] [2024-06-21 01:25:09,980] [pool-1-thread-2] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-06-21 01:25:10,021] [pool-1-thread-10] Initializing /data/paul-van-schayck/myfile.tif: [testng] [2024-06-21 01:25:10,517] [pool-1-thread-4] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-06-21 01:25:10,618] [pool-1-thread-5] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-06-21 01:25:10,908] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0243.TIF: [testng] [2024-06-21 01:25:11,043] [pool-1-thread-1] Initializing /data/qa-7589/CalGrid.tif: [testng] [2024-06-21 01:25:11,110] [pool-1-thread-6] Initializing /data/josh/ZProjection of stack.tif: [testng] [2024-06-21 01:25:11,601] [pool-1-thread-9] Initializing /data/damian/06m.tiff: [testng] [2024-06-21 01:25:11,809] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z048.tif: [testng] [2024-06-21 01:25:11,910] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z018.tif: [testng] [2024-06-21 01:25:11,948] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0245.TIF: [testng] [2024-06-21 01:25:12,000] [pool-1-thread-1] Initializing /data/andrew/wibble-tmp4.tiff: [testng] [2024-06-21 01:25:12,031] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z030.tif: [testng] [2024-06-21 01:25:12,342] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-06-21 01:25:12,374] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-06-21 01:25:12,505] [pool-1-thread-9] Initializing /data/public/condensation/E4.pattern8.tif: [testng] [2024-06-21 01:25:12,612] [pool-1-thread-12] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-06-21 01:25:12,644] [pool-1-thread-1] Initializing /data/misc/mri-stack.tif: [testng] [2024-06-21 01:25:12,716] [pool-1-thread-2] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-06-21 01:25:12,829] [pool-1-thread-6] Initializing /data/lzw/Cholinergic.tif: [testng] [2024-06-21 01:25:13,123] [pool-1-thread-10] Initializing /data/josiah/cell-Z37.C1.tiff: [testng] [2024-06-21 01:25:13,175] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-06-21 01:25:13,514] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z019.tif: [testng] [2024-06-21 01:25:13,551] [pool-1-thread-11] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-06-21 01:25:13,637] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z025.tif: [testng] [2024-06-21 01:25:13,736] [pool-1-thread-1] Initializing /data/qa-7589/CalGrid2.tif: [testng] [2024-06-21 01:25:13,790] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x16.tiff: [testng] [2024-06-21 01:25:14,025] [pool-1-thread-10] Initializing /data/samples/melissa/strike-uncompressed.tiff: [testng] [2024-06-21 01:25:14,058] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0238.TIF: [testng] [2024-06-21 01:25:14,170] [pool-1-thread-12] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-06-21 01:25:14,224] [pool-1-thread-11] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-06-21 01:25:14,312] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0253.TIF: [testng] [2024-06-21 01:25:14,424] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-32.tiff: [testng] [2024-06-21 01:25:14,448] [pool-1-thread-2] Initializing /data/curtis/tubhiswt-5D.tif: [testng] [2024-06-21 01:25:14,569] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-06-21 01:25:14,757] [pool-1-thread-1] Initializing /data/curtis/imagesEight.tiff: [testng] [2024-06-21 01:25:14,857] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z042.tif: [testng] [2024-06-21 01:25:14,993] [pool-1-thread-6] Initializing /data/wayne/m51-16bit.tif: [testng] [2024-06-21 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/data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-06-21 01:27:36,371] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z000.tif: [testng] [2024-06-21 01:27:36,442] [pool-1-thread-5] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-06-21 01:27:36,498] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0233.TIF: [testng] [2024-06-21 01:27:36,741] [pool-1-thread-6] Initializing /data/public/condensation/C4.pattern9.tif: [testng] [2024-06-21 01:27:36,945] [pool-1-thread-3] Initializing /data/public/libtiff/jim___cg.tif: [testng] [2024-06-21 01:27:37,195] [pool-1-thread-3] Initializing /data/christine/Image5D_4color test stack/test stack.tif: [testng] [2024-06-21 01:27:37,395] [pool-1-thread-6] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-06-21 01:27:37,520] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-06-21 01:27:37,586] [pool-1-thread-5] Initializing 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/data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x48.tiff: [testng] [2024-06-21 01:27:39,826] [pool-1-thread-4] Initializing /data/josiah/cell-Z12.C1.tiff: [testng] [2024-06-21 01:27:40,020] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-06-21 01:27:40,049] [pool-1-thread-10] Initializing /data/wayne/Rockies-8bit-indexed.tif: [testng] [2024-06-21 01:27:40,074] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0241.TIF: [testng] [2024-06-21 01:27:40,434] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs000.TIF: [testng] [2024-06-21 01:27:40,483] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-06-21 01:27:40,542] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x64.tiff: [testng] [2024-06-21 01:27:40,702] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z019.tif: [testng] [2024-06-21 01:27:41,014] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0217.TIF: [testng] [2024-06-21 01:27:41,204] [pool-1-thread-9] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] [2024-06-21 01:27:41,678] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z004.tif: [testng] [2024-06-21 01:27:41,711] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z050.tif: [testng] [2024-06-21 01:27:41,970] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-06-21 01:27:42,036] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z001.tif: [testng] [2024-06-21 01:27:42,075] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-06-21 01:27:42,184] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-06-21 01:27:42,227] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0223.TIF: [testng] [2024-06-21 01:27:42,380] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z009.tif: [testng] [2024-06-21 01:27:42,638] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0231.TIF: [testng] [2024-06-21 01:27:42,697] [pool-1-thread-6] Initializing /data/josiah/cell-Z23.C0.tiff: [testng] [2024-06-21 01:27:43,109] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x32.tiff: [testng] [2024-06-21 01:27:43,147] [pool-1-thread-10] Initializing /data/sub-resolution/Leica-2/Leica-2-subifds.tiff: [testng] [2024-06-21 01:27:43,215] [pool-1-thread-6] Initializing /data/damian/24m.tiff: [testng] [2024-06-21 01:27:43,244] [pool-1-thread-9] Initializing /data/tom-kazimiers/test_exiftool2_resave2.tiff: [testng] [2024-06-21 01:27:43,400] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z051.tif: [testng] [2024-06-21 01:27:43,587] [pool-1-thread-4] Initializing /data/public/condensation/B12.pattern3.tif: [testng] [2024-06-21 01:27:43,663] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x16.tiff: [testng] [2024-06-21 01:27:43,817] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-06-21 01:27:43,860] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] [2024-06-21 01:27:43,919] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-06-21 01:27:44,279] [pool-1-thread-9] Initializing /data/ascb/CYT-55_HowellGolgiRibbonOutlined_4800.tif: [testng] [2024-06-21 01:27:44,517] [pool-1-thread-6] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-06-21 01:27:44,621] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-06-21 01:27:44,744] [pool-1-thread-1] Initializing /data/darwinjob/SESSION4_Image2.tif: [testng] [2024-06-21 01:27:45,182] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0240.TIF: [testng] [2024-06-21 01:27:45,362] [pool-1-thread-6] Initializing 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[2024-06-21 01:27:48,272] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-06-21 01:27:48,377] [pool-1-thread-6] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-06-21 01:27:48,584] [pool-1-thread-12] Initializing /data/tobias/test002_1.tif: [testng] [2024-06-21 01:27:48,651] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z062.tif: [testng] [2024-06-21 01:27:48,719] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0247.TIF: [testng] [2024-06-21 01:27:48,950] [pool-1-thread-5] Initializing /data/josiah/cell-Z19.C0.tiff: [testng] [2024-06-21 01:27:49,063] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-06-21 01:27:49,147] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z011.tif: [testng] [2024-06-21 01:27:49,300] [pool-1-thread-4] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-06-21 01:27:49,427] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-64.tiff: [testng] [2024-06-21 01:27:49,461] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z020.tif: [testng] [2024-06-21 01:27:49,658] [pool-1-thread-10] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] [2024-06-21 01:27:49,706] [pool-1-thread-3] Initializing /data/josiah/cell-Z31.C1.tiff: [testng] [2024-06-21 01:27:49,748] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-06-21 01:27:49,808] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-06-21 01:27:49,914] [pool-1-thread-4] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-06-21 01:27:49,954] [pool-1-thread-5] Initializing /data/public/condensation/A6.pattern2.tif: [testng] [2024-06-21 01:27:50,023] [pool-1-thread-12] Initializing /data/ascb/FND-25_PaladeGroup_4800.tif: [testng] [2024-06-21 01:27:50,381] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z037.tif: [testng] [2024-06-21 01:27:50,589] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-06-21 01:27:50,778] [pool-1-thread-6] Initializing /data/curtis/map/the-quick: [testng] [2024-06-21 01:27:50,846] [pool-1-thread-3] Initializing /data/damian/09m.tiff: [testng] [2024-06-21 01:27:50,949] [pool-1-thread-11] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-06-21 01:27:51,012] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs001.TIF: [testng] [2024-06-21 01:27:51,061] [pool-1-thread-5] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-06-21 01:27:51,171] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z024.tif: [testng] [2024-06-21 01:27:51,465] [pool-1-thread-3] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-06-21 01:27:51,553] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0209.TIF: [testng] [2024-06-21 01:27:52,086] [pool-1-thread-5] Initializing /data/brian/Ch1_fld1.tif: [testng] [2024-06-21 01:27:52,148] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-06-21 01:27:52,215] [pool-1-thread-7] Initializing /data/brian/061124MitogreenDIV3Cell2-1 copy.tif: [testng] [2024-06-21 01:27:52,373] [pool-1-thread-4] Initializing /data/boguslaw/ret_crop_64x64x64.tif: [testng] [2024-06-21 01:27:52,558] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z011.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 42 seconds Finished: SUCCESS