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Started by upstream project "BIOFORMATS-test-repo" build number 102 originally caused by: Started by upstream project "Trigger" build number 113 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins6454507287496980720.sh + '[' hitachi = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_15733_merge_ci -v /uod/idr/repos/curated/hitachi:/data -v /uod/idr-scratch/merge-ci/curated/hitachi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:01,977 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:01,979 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:21:01,979 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:01,980 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:01,981 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:01,981 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:01,981 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:01,981 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:01,982 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:01,982 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:01,983 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:01,983 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:02,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:02,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:02,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:02,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:02,251 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:02,252 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:02,252 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:02,252 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:02,252 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:21:02,253 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:21:02,253 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 271 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-24 01:21:02,263] [main] java.version = 1.8.0_342 [testng] 01:21:02,267 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:02,267 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:02,327 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-24_01-21-02.log] [testng] 01:21:02,329 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-06-24 01:21:02,331] [main] testng.directory = /data [testng] [2024-06-24 01:21:02,331] [main] testng.configDirectory = /config [testng] [2024-06-24 01:21:02,346] [main] testng.multiplier = 1.0 [testng] [2024-06-24 01:21:02,347] [main] testng.in-memory = false [testng] [2024-06-24 01:21:02,347] [main] testng.allow-missing = false [testng] [2024-06-24 01:21:02,347] [main] user.language = fr [testng] [2024-06-24 01:21:02,347] [main] user.country = FR [testng] [2024-06-24 01:21:02,347] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-06-24 01:21:03,411] [main] ---------------------------------------- [testng] [2024-06-24 01:21:03,411] [main] Total files: 21 [testng] [2024-06-24 01:21:03,411] [main] Scan time: 1.064 s (50 ms/file) [testng] [2024-06-24 01:21:03,411] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 18 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-24 01:21:05,483] [pool-1-thread-1] Initializing /data/stefan/001_q02.txt: [testng] 01:21:05,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:05,484 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,485 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-24_01-21-05.log] [testng] 01:21:05,485 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37263fa - End of configuration. [testng] [2024-06-24 01:21:05,527] [pool-1-thread-12] Initializing /data/stefan/001_q05.txt: [testng] 01:21:05,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:05,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,528 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-24_01-21-05.log] [testng] 01:21:05,528 |-INFO in ch.qos.logback.core.sift.SiftProcessor@186d7867 - End of configuration. [testng] [2024-06-24 01:21:05,563] [pool-1-thread-11] Initializing /data/stefan/001_q09.txt: [testng] 01:21:05,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:05,564 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,565 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-24_01-21-05.log] [testng] 01:21:05,565 |-INFO in ch.qos.logback.core.sift.SiftProcessor@45ddc6b6 - End of configuration. [testng] [2024-06-24 01:21:05,646] [pool-1-thread-10] Initializing /data/stefan/001_q15.txt: [testng] 01:21:05,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:21:05,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,647 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-24_01-21-05.log] [testng] 01:21:05,648 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cc9e8b1 - End of configuration. [testng] [2024-06-24 01:21:05,696] [pool-1-thread-9] Initializing /data/stefan/001_q03.txt: [testng] 01:21:05,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:21:05,697 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,699 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-24_01-21-05.log] [testng] 01:21:05,700 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f63c894 - End of configuration. [testng] [2024-06-24 01:21:05,736] [pool-1-thread-8] Initializing /data/stefan/001_q17.txt: [testng] 01:21:05,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:21:05,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,737 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-24_01-21-05.log] [testng] 01:21:05,737 |-INFO in ch.qos.logback.core.sift.SiftProcessor@154d519 - End of configuration. [testng] [2024-06-24 01:21:05,814] [pool-1-thread-7] Initializing /data/stefan/001_q12.txt: [testng] 01:21:05,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:21:05,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,815 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-24_01-21-05.log] [testng] 01:21:05,816 |-INFO in ch.qos.logback.core.sift.SiftProcessor@765d4305 - End of configuration. [testng] [2024-06-24 01:21:05,885] [pool-1-thread-6] Initializing /data/stefan/001_q07.txt: [testng] 01:21:05,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:21:05,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,886 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-24_01-21-05.log] [testng] 01:21:05,886 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12440c35 - End of configuration. [testng] [2024-06-24 01:21:05,950] [pool-1-thread-5] Initializing /data/stefan/001_q11.txt: [testng] 01:21:05,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:21:05,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:05,952 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-24_01-21-05.log] [testng] 01:21:05,952 |-INFO in ch.qos.logback.core.sift.SiftProcessor@139a9df4 - End of configuration. [testng] [2024-06-24 01:21:06,017] [pool-1-thread-4] Initializing /data/stefan/001_q01.txt: [testng] 01:21:06,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:21:06,017 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:06,017 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-24_01-21-06.log] [testng] 01:21:06,018 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17e98e72 - End of configuration. [testng] [2024-06-24 01:21:06,042] [pool-1-thread-3] Initializing /data/stefan/001_q08.txt: [testng] 01:21:06,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:06,042 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:06,043 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-24_01-21-06.log] [testng] 01:21:06,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7540106d - End of configuration. [testng] [2024-06-24 01:21:06,117] [pool-1-thread-2] Initializing /data/stefan/001_q06.txt: [testng] 01:21:06,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:06,118 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:06,118 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-24_01-21-06.log] [testng] 01:21:06,119 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7302b0f6 - End of configuration. [testng] [2024-06-24 01:21:08,395] [pool-1-thread-1] Initializing /data/stefan/001_q13.txt: [testng] [2024-06-24 01:21:08,443] [pool-1-thread-10] Initializing /data/stefan/001_q14.txt: [testng] [2024-06-24 01:21:08,484] [pool-1-thread-4] Initializing /data/stefan/001_q04.txt: [testng] [2024-06-24 01:21:08,503] [pool-1-thread-11] Initializing /data/stefan/001_q18.txt: [testng] [2024-06-24 01:21:08,568] [pool-1-thread-6] Initializing /data/stefan/001_q10.txt: [testng] [2024-06-24 01:21:08,627] [pool-1-thread-3] Initializing /data/stefan/001_q16.txt: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 954, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 11 seconds Finished: SUCCESS