Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 104
originally caused by:
 Started by upstream project "Trigger" build number 116
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins12803081049957254940.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_16056_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
    [javac] 4 warnings

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:21:58,445 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:21:58,446 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service.
   [testng] 01:21:58,446 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:58,447 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:58,448 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:21:58,448 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:21:58,449 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:21:58,449 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:58,449 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:58,450 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:21:58,450 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:21:58,450 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:21:58,701 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:21:58,701 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:21:58,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:21:58,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:21:58,734 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:21:58,735 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:21:58,735 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:21:58,735 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:21:58,735 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration.
   [testng] 01:21:58,736 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point
   [testng] 01:21:58,736 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 287 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-06-27 01:21:58,746] [main] java.version = 21
   [testng] 01:21:58,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:21:58,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:58,791 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-27_01-21-58.log]
   [testng] 01:21:58,793 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
   [testng] [2024-06-27 01:21:58,795] [main] testng.directory = /data
   [testng] [2024-06-27 01:21:58,795] [main] testng.configDirectory = /config
   [testng] [2024-06-27 01:21:58,804] [main] testng.multiplier = 1.0
   [testng] [2024-06-27 01:21:58,804] [main] testng.in-memory = false
   [testng] [2024-06-27 01:21:58,804] [main] testng.allow-missing = false
   [testng] [2024-06-27 01:21:58,804] [main] user.language = en
   [testng] [2024-06-27 01:21:58,804] [main] user.country = ${user.country}
   [testng] [2024-06-27 01:21:58,804] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-06-27 01:22:13,558] [main] ----------------------------------------
   [testng] [2024-06-27 01:22:13,559] [main] Total files: 283
   [testng] [2024-06-27 01:22:13,559] [main] Scan time: 14.753 s (52 ms/file)
   [testng] [2024-06-27 01:22:13,559] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 186 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-06-27 01:30:32,199] [pool-1-thread-1] Initializing /data/olympus/XYZt.oir: 
   [testng] 01:30:32,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:30:32,200 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:32,202 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-27_01-30-32.log]
   [testng] 01:30:32,202 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d13ac28 - End of configuration.
   [testng] [2024-06-27 01:30:33,402] [pool-1-thread-12] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: 
   [testng] 01:30:33,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:30:33,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,403 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-27_01-30-33.log]
   [testng] 01:30:33,403 |-INFO in ch.qos.logback.core.sift.SiftProcessor@796879c6 - End of configuration.
   [testng] [2024-06-27 01:30:33,486] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.oir: 
   [testng] 01:30:33,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:30:33,486 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,487 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-27_01-30-33.log]
   [testng] 01:30:33,487 |-INFO in ch.qos.logback.core.sift.SiftProcessor@354fd0d2 - End of configuration.
   [testng] [2024-06-27 01:30:33,907] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: 
   [testng] 01:30:33,908 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:30:33,908 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,908 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-27_01-30-33.log]
   [testng] 01:30:33,909 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1044fb86 - End of configuration.
   [testng] [2024-06-27 01:30:33,952] [pool-1-thread-9] Initializing /data/qa-17919/f10187.oir: 
   [testng] 01:30:33,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:30:33,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:33,953 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-27_01-30-33.log]
   [testng] 01:30:33,954 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29353cbd - End of configuration.
   [testng] [2024-06-27 01:30:53,432] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.oir: 
   [testng] 01:30:53,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:30:53,433 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:53,434 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-27_01-30-53.log]
   [testng] 01:30:53,434 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7663c155 - End of configuration.
   [testng] [2024-06-27 01:30:54,094] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: 
   [testng] 01:30:54,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:30:54,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:54,095 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-27_01-30-54.log]
   [testng] 01:30:54,095 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e77a1bb - End of configuration.
   [testng] [2024-06-27 01:30:54,219] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: 
   [testng] 01:30:54,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:30:54,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:54,220 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-27_01-30-54.log]
   [testng] 01:30:54,221 |-INFO in ch.qos.logback.core.sift.SiftProcessor@518a5da6 - End of configuration.
   [testng] [2024-06-27 01:30:54,335] [pool-1-thread-5] Initializing /data/qa-17922/example_multipart.oir: 
   [testng] 01:30:54,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:30:54,336 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:54,337 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-27_01-30-54.log]
   [testng] 01:30:54,337 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23a46278 - End of configuration.
   [testng] [2024-06-27 01:31:18,460] [pool-1-thread-4] Initializing /data/qa-17335/1.ome.tif: 
   [testng] 01:31:18,460 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:31:18,460 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:31:18,462 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-27_01-31-18.log]
   [testng] 01:31:18,462 |-INFO in ch.qos.logback.core.sift.SiftProcessor@111ec283 - End of configuration.
   [testng] [2024-06-27 01:31:18,532] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: 
   [testng] 01:31:18,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:31:18,532 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:31:18,533 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-27_01-31-18.log]
   [testng] 01:31:18,533 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fd99916 - End of configuration.
   [testng] [2024-06-27 01:31:18,587] [pool-1-thread-2] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: 
   [testng] 01:31:18,587 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:31:18,587 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:31:18,587 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-27_01-31-18.log]
   [testng] 01:31:18,588 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6da68e70 - End of configuration.
   [testng] [2024-06-27 01:31:20,880] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: 
   [testng] [2024-06-27 01:31:20,964] [pool-1-thread-12] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: 
   [testng] [2024-06-27 01:31:21,262] [pool-1-thread-6] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: 
   [testng] [2024-06-27 01:31:21,337] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: 
   [testng] [2024-06-27 01:31:21,387] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: 
   [testng] [2024-06-27 01:31:21,538] [pool-1-thread-10] Initializing /data/cudmore/20190401__0005.oir: 
   [testng] [2024-06-27 01:31:27,588] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: 
   [testng] [2024-06-27 01:31:27,893] [pool-1-thread-8] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: 
   [testng] [2024-06-27 01:31:28,981] [pool-1-thread-3] Initializing /data/public/etienne/venus stack.ome.tif: 
   [testng] [2024-06-27 01:31:29,320] [pool-1-thread-4] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: 
   [testng] [2024-06-27 01:31:29,429] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729.oir: 
   [testng] [2024-06-27 01:31:29,692] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: 
   [testng] [2024-06-27 01:31:29,965] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: 
   [testng] [2024-06-27 01:31:30,709] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: 
   [testng] [2024-06-27 01:31:31,178] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: 
   [testng] [2024-06-27 01:31:31,433] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2.ome.tif: 
   [testng] [2024-06-27 01:31:31,541] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: 
   [testng] [2024-06-27 01:31:31,934] [pool-1-thread-8] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: 
   [testng] [2024-06-27 01:31:32,132] [pool-1-thread-11] Initializing /data/olympus/Clipboard-XYZt.tif: 
   [testng] [2024-06-27 01:31:32,276] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: 
   [testng] [2024-06-27 01:31:32,696] [pool-1-thread-7] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: 
   [testng] [2024-06-27 01:31:33,165] [pool-1-thread-2] Initializing /data/qa-17917/f10010.oir: 
   [testng] [2024-06-27 01:32:02,269] [pool-1-thread-3] Initializing /data/qa-17335/stimulation_0001_LSM.oir: 
   [testng] [2024-06-27 01:32:02,564] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: 
   [testng] [2024-06-27 01:32:02,630] [pool-1-thread-4] Initializing /data/qa-17335/Clipboard-1.tif: 
   [testng] [2024-06-27 01:32:03,078] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: 
   [testng] [2024-06-27 01:32:03,245] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: 
   [testng] [2024-06-27 01:32:03,523] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: 
   [testng] [2024-06-27 01:32:03,808] [pool-1-thread-7] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: 
   [testng] [2024-06-27 01:32:04,083] [pool-1-thread-6] Initializing /data/qa-16871/XY_0003.ome.tif: 
   [testng] [2024-06-27 01:32:04,250] [pool-1-thread-4] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: 
   [testng] [2024-06-27 01:32:04,713] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.vsi: 
   [testng] [2024-06-27 01:32:04,749] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: 
   [testng] [2024-06-27 01:32:04,930] [pool-1-thread-8] Initializing /data/qa-16871/Clipboard.tif: 
   [testng] [2024-06-27 01:32:04,989] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: 
   [testng] [2024-06-27 01:32:05,151] [pool-1-thread-3] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: 
   [testng] [2024-06-27 01:32:05,550] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: 
   [testng] [2024-06-27 01:32:06,032] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: 
   [testng] [2024-06-27 01:32:06,283] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729.ome.tif: 
   [testng] [2024-06-27 01:32:06,427] [pool-1-thread-8] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: 
   [testng] [2024-06-27 01:32:06,767] [pool-1-thread-12] Initializing /data/qa-17270/image1.oir: 
   [testng] [2024-06-27 01:32:06,955] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: 
   [testng] [2024-06-27 01:32:07,137] [pool-1-thread-1] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: 
   [testng] [2024-06-27 01:32:07,402] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: 
   [testng] [2024-06-27 01:32:07,532] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0024.oir: 
   [testng] [2024-06-27 01:32:07,741] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: 
   [testng] [2024-06-27 01:32:07,975] [pool-1-thread-12] Initializing /data/qa-17335/OSR-Z.oir: 
   [testng] [2024-06-27 01:32:08,239] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: 
   [testng] [2024-06-27 01:32:08,596] [pool-1-thread-6] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: 
   [testng] [2024-06-27 01:32:08,971] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: 
   [testng] [2024-06-27 01:32:09,013] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: 
   [testng] [2024-06-27 01:32:09,108] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.oir: 
   [testng] [2024-06-27 01:32:09,358] [pool-1-thread-12] Initializing /data/qa-17270/Clipboard-alexa488.tif: 
   [testng] [2024-06-27 01:32:09,409] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: 
   [testng] [2024-06-27 01:32:09,602] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: 
   [testng] [2024-06-27 01:32:09,732] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: 
   [testng] [2024-06-27 01:32:10,472] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.ome.tif: 
   [testng] [2024-06-27 01:32:10,546] [pool-1-thread-6] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: 
   [testng] [2024-06-27 01:32:10,700] [pool-1-thread-12] Initializing /data/qa-17331/60x zstack RS.oir: 
   [testng] [2024-06-27 01:32:11,047] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: 
   [testng] [2024-06-27 01:32:11,721] [pool-1-thread-4] Initializing /data/olympus/calcium sparks_XYt.oir: 
   [testng] [2024-06-27 01:32:12,481] [pool-1-thread-6] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: 
   [testng] [2024-06-27 01:32:12,527] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: 
   [testng] [2024-06-27 01:32:12,894] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: 
   [testng] [2024-06-27 01:32:12,996] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: 
   [testng] [2024-06-27 01:32:13,718] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: 
   [testng] [2024-06-27 01:32:13,822] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: 
   [testng] [2024-06-27 01:32:14,169] [pool-1-thread-3] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: 
   [testng] [2024-06-27 01:32:14,961] [pool-1-thread-8] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: 
   [testng] [2024-06-27 01:32:15,571] [pool-1-thread-12] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: 
   [testng] [2024-06-27 01:32:16,504] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: 
   [testng] [2024-06-27 01:32:16,745] [pool-1-thread-7] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: 
   [testng] [2024-06-27 01:32:16,833] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: 
   [testng] [2024-06-27 01:32:17,291] [pool-1-thread-1] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: 
   [testng] [2024-06-27 01:32:17,411] [pool-1-thread-6] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: 
   [testng] [2024-06-27 01:32:17,679] [pool-1-thread-4] Initializing /data/qa-17335/OSR-Z.ome.tif: 
   [testng] [2024-06-27 01:32:18,485] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: 
   [testng] [2024-06-27 01:32:18,602] [pool-1-thread-1] Initializing /data/qa-17270/stack1.ome.tif: 
   [testng] [2024-06-27 01:32:18,848] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: 
   [testng] [2024-06-27 01:32:19,308] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: 
   [testng] [2024-06-27 01:32:22,264] [pool-1-thread-11] Initializing /data/olympus/Stitched_XYZ.oir: 
   [testng] [2024-06-27 01:32:22,986] [pool-1-thread-1] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: 
   [testng] [2024-06-27 01:32:23,160] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: 
   [testng] [2024-06-27 01:32:23,220] [pool-1-thread-6] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: 
   [testng] [2024-06-27 01:32:24,122] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: 
   [testng] [2024-06-27 01:32:29,132] [pool-1-thread-8] Initializing /data/qa-17270/image1.ome.tif: 
   [testng] [2024-06-27 01:32:29,367] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: 
   [testng] [2024-06-27 01:32:29,532] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: 
   [testng] [2024-06-27 01:32:29,873] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: 
   [testng] [2024-06-27 01:32:30,004] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: 
   [testng] [2024-06-27 01:32:30,777] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.ome.tif: 
   [testng] [2024-06-27 01:32:30,939] [pool-1-thread-1] Initializing /data/qa-17409/Stitch_A01_G001.oir: 
   [testng] [2024-06-27 01:32:31,401] [pool-1-thread-3] Initializing /data/olympus/2017-04-20/Clipboard.tif: 
   [testng] [2024-06-27 01:32:31,472] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.ome.tif: 
   [testng] [2024-06-27 01:32:31,870] [pool-1-thread-11] Initializing /data/public/etienne/amy slice z stack_0001.oir: 
   [testng] [2024-06-27 01:32:32,068] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/Clipboard.tif: 
   [testng] [2024-06-27 01:32:33,021] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0006.oir: 
   [testng] [2024-06-27 01:32:33,581] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0019.oir: 
   [testng] [2024-06-27 01:32:33,811] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: 
   [testng] [2024-06-27 01:32:33,938] [pool-1-thread-6] Initializing /data/qa-17293/Clipboard.tif: 
   [testng] [2024-06-27 01:32:34,021] [pool-1-thread-11] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: 
   [testng] [2024-06-27 01:32:35,134] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: 
   [testng] [2024-06-27 01:32:35,352] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: 
   [testng] [2024-06-27 01:32:35,477] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2.oir: 
   [testng] [2024-06-27 01:32:36,055] [pool-1-thread-6] Initializing /data/qa-17270/stack1.oir: 
   [testng] [2024-06-27 01:32:37,842] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: 
   [testng] [2024-06-27 01:32:37,908] [pool-1-thread-8] Initializing /data/qa-17270/alexa488.oir: 
   [testng] [2024-06-27 01:32:38,286] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: 
   [testng] [2024-06-27 01:32:38,532] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: 
   [testng] [2024-06-27 01:32:38,993] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: 
   [testng] [2024-06-27 01:32:39,045] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: 
   [testng] [2024-06-27 01:32:39,687] [pool-1-thread-11] Initializing /data/olympus/calcium sparks.jpg: 
   [testng] [2024-06-27 01:32:39,772] [pool-1-thread-8] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: 
   [testng] [2024-06-27 01:32:39,873] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: 
   [testng] [2024-06-27 01:32:40,392] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: 
   [testng] [2024-06-27 01:32:40,798] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: 
   [testng] [2024-06-27 01:32:41,315] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: 
   [testng] [2024-06-27 01:32:41,577] [pool-1-thread-3] Initializing /data/qa-17270/alexa488.ome.tif: 
   [testng] [2024-06-27 01:32:41,672] [pool-1-thread-8] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: 
   [testng] [2024-06-27 01:32:41,902] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: 
   [testng] [2024-06-27 01:32:42,696] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: 
   [testng] [2024-06-27 01:32:42,822] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: 
   [testng] [2024-06-27 01:32:43,549] [pool-1-thread-8] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: 
   [testng] [2024-06-27 01:33:38,369] [pool-1-thread-12] Initializing /data/qa-17409/Clipboard.tif: 
   [testng] [2024-06-27 01:33:38,572] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: 
   [testng] [2024-06-27 01:33:39,243] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.ome.tif: 
   [testng] [2024-06-27 01:33:39,368] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: 
   [testng] [2024-06-27 01:33:42,024] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: 
   [testng] [2024-06-27 01:33:42,176] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: 
   [testng] [2024-06-27 01:33:42,833] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-venus stack.tif: 
   [testng] [2024-06-27 01:33:43,387] [pool-1-thread-6] Initializing /data/qa-17335/1.oir: 
   [testng] [2024-06-27 01:33:43,663] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: 
   [testng] [2024-06-27 01:33:47,729] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: 
   [testng] [2024-06-27 01:33:51,156] [pool-1-thread-3] Initializing /data/qa-16871/XY_0003.oir: 
   [testng] [2024-06-27 01:33:51,434] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-image1.tif: 
   [testng] [2024-06-27 01:33:52,009] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-stack1.tif: 
   [testng] [2024-06-27 01:33:52,690] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: 
   [testng] [2024-06-27 01:33:53,207] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: 
   [testng] [2024-06-27 01:33:53,518] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: 
   [testng] [2024-06-27 01:33:54,750] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: 
   [testng] [2024-06-27 01:33:55,015] [pool-1-thread-6] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: 
   [testng] [2024-06-27 01:33:55,331] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: 
   [testng] [2024-06-27 01:33:55,748] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: 
   [testng] [2024-06-27 01:33:56,582] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: 
   [testng] [2024-06-27 01:33:56,984] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: 
   [testng] [2024-06-27 01:33:57,098] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: 
   [testng] [2024-06-27 01:33:58,118] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: 
   [testng] [2024-06-27 01:33:58,311] [pool-1-thread-3] Initializing /data/olympus/Stitched_XYZ.ome.tif: 
   [testng] [2024-06-27 01:33:59,196] [pool-1-thread-1] Initializing /data/olympus/XYZt.vsi: 
   [testng] [2024-06-27 01:33:59,412] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: 
   [testng] [2024-06-27 01:33:59,918] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/zebra shg.oir: 
   [testng] [2024-06-27 01:34:02,169] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: 
   [testng] [2024-06-27 01:34:03,145] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: 
   [testng] [2024-06-27 01:34:03,240] [pool-1-thread-6] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: 
   [testng] [2024-06-27 01:34:03,944] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: 
   [testng] [2024-06-27 01:34:04,361] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0019.oir: 
   [testng] [2024-06-27 01:34:04,606] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: 
   [testng] [2024-06-27 01:34:05,348] [pool-1-thread-7] Initializing /data/qa-17331/Clipboard.tif: 
   [testng] [2024-06-27 01:34:05,763] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: 
   [testng] [2024-06-27 01:34:06,053] [pool-1-thread-3] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: 
   [testng] [2024-06-27 01:34:06,244] [pool-1-thread-3] Initializing /data/olympus/XYZt.ome.tif: 
   [testng] [2024-06-27 01:34:06,857] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: 
   [testng] [2024-06-27 01:34:07,163] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: 
   [testng] [2024-06-27 01:34:08,323] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: 
   [testng] [2024-06-27 01:34:09,421] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: 
   [testng] [2024-06-27 01:34:09,608] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: 
   [testng] [2024-06-27 01:34:10,763] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: 
   [testng] [2024-06-27 01:34:11,007] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: 
   [testng] [2024-06-27 01:34:11,155] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: 
   [testng] [2024-06-27 01:34:12,262] [pool-1-thread-6] Initializing /data/public/etienne/coupe shg stack_0001.oir: 
   [testng] [2024-06-27 01:34:12,512] [pool-1-thread-7] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: 
   [testng] [2024-06-27 01:34:13,145] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: 
   [testng] [2024-06-27 01:34:13,278] [pool-1-thread-4] Initializing /data/qa-21508/Stitch_A01_G008.oir: 
   [testng] [2024-06-27 01:34:14,010] [pool-1-thread-7] Initializing /data/olympus/Stitched_XYZ.vsi: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 9858, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 49 minutes 24 seconds
Finished: SUCCESS