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Started by upstream project "BIOFORMATS-test-repo" build number 107 originally caused by: Started by upstream project "Trigger" build number 119 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins15079625661577559640.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_16548_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:22:51,084 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:22:51,085 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:22:51,085 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:51,087 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:51,087 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:22:51,088 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:22:51,088 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:22:51,088 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:51,089 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:51,090 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:22:51,090 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:22:51,090 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:51,273 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:51,273 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:51,315 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:51,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:51,323 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:51,323 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:51,324 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:51,324 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:51,324 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:22:51,325 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:22:51,325 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 236 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-30 01:22:51,338] [main] java.version = 17.0.2 [testng] 01:22:51,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:51,343 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:51,403 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-30_01-22-51.log] [testng] 01:22:51,405 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-06-30 01:22:51,408] [main] testng.directory = /data [testng] [2024-06-30 01:22:51,408] [main] testng.configDirectory = /config [testng] [2024-06-30 01:22:51,422] [main] testng.multiplier = 1.0 [testng] [2024-06-30 01:22:51,423] [main] testng.in-memory = false [testng] [2024-06-30 01:22:51,423] [main] testng.allow-missing = false [testng] [2024-06-30 01:22:51,423] [main] user.language = en [testng] [2024-06-30 01:22:51,423] [main] user.country = ${user.country} [testng] [2024-06-30 01:22:51,423] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-06-30 01:23:09,034] [main] ---------------------------------------- [testng] [2024-06-30 01:23:09,034] [main] Total files: 283 [testng] [2024-06-30 01:23:09,034] [main] Scan time: 17.61 s (62 ms/file) [testng] [2024-06-30 01:23:09,034] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-30 01:31:12,841] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 01:31:12,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:31:12,841 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:12,843 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-30_01-31-12.log] [testng] 01:31:12,843 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f8bc963 - End of configuration. [testng] [2024-06-30 01:31:12,885] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] 01:31:12,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:31:12,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:12,887 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-30_01-31-12.log] [testng] 01:31:12,887 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3eea36a3 - End of configuration. [testng] [2024-06-30 01:31:12,992] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] 01:31:12,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:31:12,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:12,994 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-30_01-31-12.log] [testng] 01:31:12,994 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f807767 - End of configuration. [testng] [2024-06-30 01:31:13,050] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] 01:31:13,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:31:13,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:13,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-30_01-31-13.log] [testng] 01:31:13,051 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cff0c00 - End of configuration. [testng] [2024-06-30 01:31:13,168] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] 01:31:13,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:31:13,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:13,169 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-30_01-31-13.log] [testng] 01:31:13,170 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41f6325d - End of configuration. [testng] [2024-06-30 01:31:13,241] [pool-1-thread-8] Initializing /data/qa-17270/image1.oir: [testng] 01:31:13,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:31:13,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:13,242 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-30_01-31-13.log] [testng] 01:31:13,243 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b2cd835 - End of configuration. [testng] [2024-06-30 01:31:13,305] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir: [testng] 01:31:13,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:31:13,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:13,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-30_01-31-13.log] [testng] 01:31:13,307 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50ecfb31 - End of configuration. [testng] [2024-06-30 01:31:28,679] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] 01:31:28,679 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:31:28,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:28,680 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-30_01-31-28.log] [testng] 01:31:28,681 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65ed48ef - End of configuration. [testng] [2024-06-30 01:31:28,730] [pool-1-thread-5] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:31:28,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:31:28,730 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:28,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-30_01-31-28.log] [testng] 01:31:28,731 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b72b5d7 - End of configuration. [testng] [2024-06-30 01:31:28,759] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] 01:31:28,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:31:28,760 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:28,760 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-30_01-31-28.log] [testng] 01:31:28,761 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ca41f71 - End of configuration. [testng] [2024-06-30 01:31:28,859] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] 01:31:28,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:31:28,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:28,860 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-30_01-31-28.log] [testng] 01:31:28,860 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ae10945 - End of configuration. [testng] [2024-06-30 01:31:28,899] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] 01:31:28,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:31:28,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:28,900 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-30_01-31-28.log] [testng] 01:31:28,900 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22c17a91 - End of configuration. [testng] [2024-06-30 01:31:31,435] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-06-30 01:31:31,602] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-06-30 01:31:31,751] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2024-06-30 01:31:32,127] [pool-1-thread-8] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-06-30 01:31:32,208] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-06-30 01:31:32,248] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-06-30 01:31:32,275] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-06-30 01:31:32,353] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-06-30 01:31:32,411] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir: [testng] [2024-06-30 01:31:33,806] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-06-30 01:31:34,228] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi: [testng] [2024-06-30 01:31:35,258] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-06-30 01:31:35,365] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2024-06-30 01:31:35,527] [pool-1-thread-8] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-06-30 01:31:35,684] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-06-30 01:31:35,771] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2024-06-30 01:31:35,910] [pool-1-thread-3] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-06-30 01:32:24,245] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-06-30 01:32:24,305] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-06-30 01:32:24,810] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-06-30 01:32:24,979] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-06-30 01:32:25,117] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-06-30 01:32:25,317] [pool-1-thread-9] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-06-30 01:32:25,547] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2024-06-30 01:32:25,594] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2024-06-30 01:32:25,928] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-06-30 01:32:26,186] [pool-1-thread-8] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-06-30 01:32:30,182] [pool-1-thread-6] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-06-30 01:32:30,537] [pool-1-thread-11] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-06-30 01:32:30,669] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-06-30 01:32:30,898] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-06-30 01:32:31,301] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-06-30 01:32:31,444] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2024-06-30 01:32:33,594] [pool-1-thread-10] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-06-30 01:32:34,276] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-06-30 01:32:34,370] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.oir: [testng] [2024-06-30 01:32:34,584] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-06-30 01:32:35,711] [pool-1-thread-5] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-06-30 01:32:36,101] [pool-1-thread-10] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-06-30 01:32:36,510] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-06-30 01:32:37,088] [pool-1-thread-6] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-06-30 01:32:37,641] [pool-1-thread-9] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-06-30 01:32:37,973] [pool-1-thread-1] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-06-30 01:32:38,316] [pool-1-thread-2] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-06-30 01:32:38,679] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-06-30 01:32:39,987] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2024-06-30 01:32:40,182] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-06-30 01:32:40,280] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-06-30 01:32:40,379] [pool-1-thread-1] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-06-30 01:32:40,503] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-06-30 01:32:40,620] [pool-1-thread-5] Initializing 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01:33:11,559] [pool-1-thread-10] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-06-30 01:33:12,064] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2024-06-30 01:33:12,187] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-06-30 01:33:12,434] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-06-30 01:33:12,614] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-06-30 01:33:12,895] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-06-30 01:33:13,026] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-06-30 01:33:13,190] [pool-1-thread-11] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-06-30 01:33:14,383] [pool-1-thread-10] Initializing 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[pool-1-thread-10] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-06-30 01:33:16,517] [pool-1-thread-1] Initializing /data/olympus/XYZt.oir: [testng] [2024-06-30 01:33:17,839] [pool-1-thread-6] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2024-06-30 01:33:17,973] [pool-1-thread-9] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-06-30 01:33:18,257] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-06-30 01:33:18,465] [pool-1-thread-2] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-06-30 01:33:19,175] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-06-30 01:33:19,611] [pool-1-thread-11] Initializing /data/qa-17922/example_multipart.oir: [testng] [2024-06-30 01:33:38,512] [pool-1-thread-6] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-06-30 01:33:42,128] [pool-1-thread-5] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-06-30 01:33:42,211] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-06-30 01:33:42,367] [pool-1-thread-10] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-06-30 01:33:42,949] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-06-30 01:33:43,114] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-06-30 01:33:43,327] [pool-1-thread-5] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-06-30 01:33:43,786] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-06-30 01:33:44,017] [pool-1-thread-10] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-06-30 01:33:44,200] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.oir: [testng] [2024-06-30 01:33:45,184] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-06-30 01:33:45,223] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-06-30 01:33:45,304] [pool-1-thread-5] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-06-30 01:33:45,717] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-06-30 01:33:45,962] [pool-1-thread-10] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [2024-06-30 01:33:47,008] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-06-30 01:33:47,212] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-06-30 01:33:48,041] [pool-1-thread-9] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-06-30 01:33:48,151] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-06-30 01:33:48,241] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] [2024-06-30 01:33:49,076] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-06-30 01:33:49,609] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-06-30 01:33:49,658] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-06-30 01:33:49,799] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-06-30 01:33:49,859] [pool-1-thread-10] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-06-30 01:33:50,956] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2024-06-30 01:33:51,035] 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01:33:52,709] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2024-06-30 01:33:53,110] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-06-30 01:33:53,205] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-06-30 01:33:53,380] [pool-1-thread-8] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-06-30 01:33:54,046] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2024-06-30 01:33:56,644] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2024-06-30 01:33:56,744] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-06-30 01:33:56,844] [pool-1-thread-2] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-06-30 01:33:57,459] [pool-1-thread-12] Initializing 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01:34:04,928] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2024-06-30 01:34:05,035] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-06-30 01:34:05,970] [pool-1-thread-2] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-06-30 01:34:06,196] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2024-06-30 01:34:06,295] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-06-30 01:34:06,416] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-06-30 01:34:07,341] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-06-30 01:34:07,460] [pool-1-thread-8] Initializing 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Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2024-06-30 01:34:14,098] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-06-30 01:34:16,916] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-06-30 01:34:19,100] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-06-30 01:34:19,153] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2024-06-30 01:34:20,336] [pool-1-thread-6] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-06-30 01:34:21,456] [pool-1-thread-1] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-06-30 01:34:21,803] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] [2024-06-30 01:34:22,167] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-06-30 01:34:23,853] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-06-30 01:34:24,299] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2024-06-30 01:34:24,622] [pool-1-thread-1] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-06-30 01:34:25,536] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-06-30 01:34:26,105] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-06-30 01:34:27,361] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 42 minutes 47 seconds Finished: SUCCESS