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Started by upstream project "BIOFORMATS-test-repo" build number 107 originally caused by: Started by upstream project "Trigger" build number 119 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins11928172753446437554.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_16549_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:22:51,079 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:22:51,080 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:22:51,080 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:51,081 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:51,082 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:22:51,083 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:22:51,083 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:22:51,083 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:51,084 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:51,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:22:51,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:22:51,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:51,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:51,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:51,342 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:51,342 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:51,348 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:51,348 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:51,348 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:51,349 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:51,349 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:22:51,349 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:22:51,349 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 265 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-06-30 01:22:51,360] [main] java.version = 17.0.2 [testng] 01:22:51,363 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:51,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:51,408 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-06-30_01-22-51.log] [testng] 01:22:51,409 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-06-30 01:22:51,412] [main] testng.directory = /data [testng] [2024-06-30 01:22:51,412] [main] testng.configDirectory = /config [testng] [2024-06-30 01:22:51,422] [main] testng.multiplier = 1.0 [testng] [2024-06-30 01:22:51,423] [main] testng.in-memory = false [testng] [2024-06-30 01:22:51,423] [main] testng.allow-missing = false [testng] [2024-06-30 01:22:51,423] [main] user.language = en [testng] [2024-06-30 01:22:51,423] [main] user.country = ${user.country} [testng] [2024-06-30 01:22:51,423] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-06-30 01:22:59,520] [main] ---------------------------------------- [testng] [2024-06-30 01:22:59,521] [main] Total files: 4426 [testng] [2024-06-30 01:22:59,521] [main] Scan time: 8.097 s (1 ms/file) [testng] [2024-06-30 01:22:59,521] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-06-30 01:24:53,962] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0221.TIF: [testng] 01:24:53,962 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:24:53,962 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:53,964 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-06-30_01-24-53.log] [testng] 01:24:53,964 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25ca8aa9 - End of configuration. [testng] [2024-06-30 01:24:54,039] [pool-1-thread-12] Initializing /data/public/libtiff/jim___cg.tif: [testng] 01:24:54,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:24:54,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,041 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-06-30_01-24-54.log] [testng] 01:24:54,041 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fe126e6 - End of configuration. [testng] [2024-06-30 01:24:54,066] [pool-1-thread-11] Initializing /data/chris-wood/15ms full low light.tif: [testng] 01:24:54,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:24:54,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,067 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-06-30_01-24-54.log] [testng] 01:24:54,068 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39c3abd5 - End of configuration. [testng] [2024-06-30 01:24:54,134] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z006.tif: [testng] 01:24:54,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:24:54,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,135 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-06-30_01-24-54.log] [testng] 01:24:54,135 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e543e03 - End of configuration. [testng] [2024-06-30 01:24:54,171] [pool-1-thread-9] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] 01:24:54,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:24:54,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,172 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-06-30_01-24-54.log] [testng] 01:24:54,173 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53ea55e7 - End of configuration. [testng] [2024-06-30 01:24:54,213] [pool-1-thread-8] Initializing /data/damian/18m.tiff: [testng] 01:24:54,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:24:54,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,214 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-06-30_01-24-54.log] [testng] 01:24:54,214 |-INFO in ch.qos.logback.core.sift.SiftProcessor@424a807d - End of configuration. [testng] [2024-06-30 01:24:54,255] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z016.tif: [testng] 01:24:54,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:24:54,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,256 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-06-30_01-24-54.log] [testng] 01:24:54,256 |-INFO in ch.qos.logback.core.sift.SiftProcessor@200b0321 - End of configuration. [testng] [2024-06-30 01:24:54,299] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x16.tiff: [testng] 01:24:54,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:24:54,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,301 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-06-30_01-24-54.log] [testng] 01:24:54,301 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a0a06f7 - End of configuration. [testng] [2024-06-30 01:24:54,325] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] 01:24:54,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:24:54,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,326 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-06-30_01-24-54.log] [testng] 01:24:54,327 |-INFO in ch.qos.logback.core.sift.SiftProcessor@543d6ad1 - End of configuration. [testng] [2024-06-30 01:24:54,360] [pool-1-thread-4] Initializing /data/ascb/CYT-92_PasolliMouse1b_4800.tif: [testng] 01:24:54,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:24:54,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,361 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-06-30_01-24-54.log] [testng] 01:24:54,361 |-INFO in ch.qos.logback.core.sift.SiftProcessor@743dfe83 - End of configuration. [testng] [2024-06-30 01:24:54,423] [pool-1-thread-3] Initializing /data/josiah/cell-Z39.C1.tiff: [testng] 01:24:54,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:24:54,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,424 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-06-30_01-24-54.log] [testng] 01:24:54,425 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7643a519 - End of configuration. [testng] [2024-06-30 01:24:54,452] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] 01:24:54,452 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:24:54,452 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,453 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-06-30_01-24-54.log] [testng] 01:24:54,453 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8460cdf - End of configuration. [testng] [2024-06-30 01:24:56,753] [pool-1-thread-3] Initializing /data/misc/mri-stack.tif: [testng] [2024-06-30 01:24:56,794] [pool-1-thread-6] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-06-30 01:24:56,821] [pool-1-thread-12] Initializing /data/sarah/FITC left 100% 1x mag00000.tif: [testng] [2024-06-30 01:24:56,848] [pool-1-thread-2] Initializing /data/josiah/cell-Z39.C0.tiff: [testng] [2024-06-30 01:24:56,872] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-06-30 01:24:56,893] [pool-1-thread-8] Initializing /data/paul-van-schayck/myfile.tif: [testng] [2024-06-30 01:24:56,914] [pool-1-thread-7] Initializing /data/public/condensation/A5.pattern2.tif: [testng] [2024-06-30 01:24:56,955] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-06-30 01:24:56,995] [pool-1-thread-10] Initializing /data/josiah/cell-Z32.C1.tiff: [testng] [2024-06-30 01:24:57,023] [pool-1-thread-1] Initializing /data/damian/00m.tiff: [testng] [2024-06-30 01:24:57,687] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-06-30 01:24:57,759] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-06-30 01:24:57,793] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [2024-06-30 01:24:57,857] [pool-1-thread-10] Initializing /data/public/condensation/A6.pattern2.tif: [testng] [2024-06-30 01:24:57,947] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x64.tiff: [testng] [2024-06-30 01:24:57,971] [pool-1-thread-1] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-06-30 01:24:58,011] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs016.TIF: [testng] [2024-06-30 01:24:58,049] [pool-1-thread-6] Initializing /data/marc/ball48_LOCI_RGB_autoscale_10x.tif: [testng] [2024-06-30 01:24:58,119] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z033.tif: [testng] [2024-06-30 01:24:58,154] [pool-1-thread-7] Initializing /data/josiah/cell-Z18.C1.tiff: [testng] [2024-06-30 01:24:58,550] [pool-1-thread-11] Initializing /data/josiah/cell-Z0.C1.tiff: [testng] [2024-06-30 01:24:58,586] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-06-30 01:24:58,616] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-06-30 01:24:58,666] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-06-30 01:24:58,683] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-06-30 01:24:58,831] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-06-30 01:24:59,122] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] [2024-06-30 01:24:59,160] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-06-30 01:24:59,431] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs007.TIF: [testng] [2024-06-30 01:24:59,477] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-06-30 01:24:59,532] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] [2024-06-30 01:24:59,594] [pool-1-thread-5] Initializing /data/misc/mri-old.mov: [testng] [2024-06-30 01:24:59,617] [pool-1-thread-11] Initializing /data/samples/cielab/Ski_TC8-03_sRGB.tif: [testng] [2024-06-30 01:24:59,766] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-06-30 01:24:59,845] [pool-1-thread-8] Initializing /data/public/condensation/B12.pattern1.tif: [testng] [2024-06-30 01:24:59,921] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z056.tif: [testng] [2024-06-30 01:24:59,966] [pool-1-thread-10] Initializing /data/julien/CRBMquadtour.tif: [testng] [2024-06-30 01:25:04,396] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z007.tif: [testng] [2024-06-30 01:25:04,714] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z012.tif: [testng] [2024-06-30 01:25:04,745] [pool-1-thread-1] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-06-30 01:25:04,954] [pool-1-thread-6] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-06-30 01:25:05,088] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z002.tif: [testng] [2024-06-30 01:25:05,180] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-06-30 01:25:05,227] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-06-30 01:25:05,297] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-05.tiff: [testng] [2024-06-30 01:25:05,331] [pool-1-thread-5] 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01:26:51,907] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x48.tiff: [testng] [2024-06-30 01:26:52,138] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-06-30 01:26:52,192] [pool-1-thread-8] Initializing /data/ascb/CYT-146_Fader_Distribution.tif: [testng] [2024-06-30 01:26:52,413] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-06-30 01:26:52,767] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-06-30 01:26:53,012] [pool-1-thread-10] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-06-30 01:26:53,201] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0217.TIF: [testng] [2024-06-30 01:26:53,831] [pool-1-thread-10] Initializing /data/wayne/mBoeglin_lzw/mm_7.1.2.0.tif: [testng] [2024-06-30 01:26:53,935] [pool-1-thread-3] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-06-30 01:26:54,288] [pool-1-thread-6] Initializing /data/qa-20514/819_2.tif: [testng] [2024-06-30 01:26:54,579] [pool-1-thread-3] Initializing /data/public/libtiff/oxford.tif: [testng] [2024-06-30 01:26:54,841] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z012.tif: [testng] [2024-06-30 01:26:55,253] [pool-1-thread-3] Initializing /data/josiah/cell-Z12.C0.tiff: [testng] [2024-06-30 01:26:55,276] [pool-1-thread-9] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-06-30 01:26:55,769] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-06-30 01:26:56,307] [pool-1-thread-3] Initializing /data/martin/head.tif: [testng] [2024-06-30 01:26:56,610] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] [2024-06-30 01:26:56,638] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-06-30 01:26:56,709] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-06-30 01:26:56,827] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-06-30 01:26:56,913] [pool-1-thread-5] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-06-30 01:26:56,943] [pool-1-thread-6] Initializing /data/qa-4968/twocars2.tif: [testng] [2024-06-30 01:26:57,337] [pool-1-thread-10] Initializing /data/wayne/Rockies-8bit-indexed.tif: [testng] [2024-06-30 01:26:57,503] [pool-1-thread-5] Initializing /data/josiah/cell-Z8.C1.tiff: [testng] [2024-06-30 01:26:57,645] [pool-1-thread-3] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-06-30 01:26:57,701] [pool-1-thread-2] Initializing /data/public/libtiff/jim___ah.tif: [testng] [2024-06-30 01:26:58,302] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-06-30 01:26:58,487] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0253.TIF: [testng] [2024-06-30 01:26:58,651] [pool-1-thread-10] Initializing /data/ascb/CYT-2_BaintonBoylesPhagocytosisYeastB_4800.tif: [testng] [2024-06-30 01:26:58,691] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs012.TIF: [testng] [2024-06-30 01:26:58,876] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-06-30 01:26:58,908] [pool-1-thread-3] Initializing /data/jae/first image.tif: [testng] [2024-06-30 01:26:59,186] [pool-1-thread-5] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-06-30 01:26:59,210] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-06-30 01:26:59,351] [pool-1-thread-3] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-06-30 01:27:01,662] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-06-30 01:27:02,063] [pool-1-thread-5] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-06-30 01:27:02,095] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z037.tif: [testng] [2024-06-30 01:27:02,122] [pool-1-thread-4] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-06-30 01:27:02,326] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z044.tif: [testng] [2024-06-30 01:27:02,368] [pool-1-thread-2] Initializing /data/marc/ball48_original_10x.tif: [testng] [2024-06-30 01:27:02,519] [pool-1-thread-12] Initializing /data/ascb/bad/FND-17_FawcettNucleus_4800.tif: [testng] [2024-06-30 01:27:02,595] [pool-1-thread-4] Initializing /data/damian/15m.tiff: [testng] [2024-06-30 01:27:02,620] [pool-1-thread-5] Initializing /data/ascb/bad/FND-21_FawcettPhillipsTransverse_4800.tif: [testng] [2024-06-30 01:27:02,715] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-06-30 01:27:02,832] [pool-1-thread-1] Initializing /data/josiah/cell-Z35.C1.tiff: [testng] [2024-06-30 01:27:03,093] [pool-1-thread-6] Initializing /data/ascb/FND-12_PorterFranziniSarcoplasmic_4800.tif: [testng] [2024-06-30 01:27:03,147] [pool-1-thread-4] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-06-30 01:27:03,458] [pool-1-thread-1] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-06-30 01:27:03,739] [pool-1-thread-4] Initializing /data/public/libtiff/strike.tif: [testng] [2024-06-30 01:27:04,109] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-06-30 01:27:04,411] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-06-30 01:27:04,464] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-60.tiff: [testng] [2024-06-30 01:27:04,498] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z006.tif: [testng] [2024-06-30 01:27:04,741] [pool-1-thread-1] Initializing /data/stephane/d02&007.tif: [testng] [2024-06-30 01:27:04,869] [pool-1-thread-4] Initializing /data/jae/Rat_Hippocampal_Neuron.tif: [testng] [2024-06-30 01:27:05,066] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z012.tif: [testng] [2024-06-30 01:27:05,180] [pool-1-thread-1] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-06-30 01:27:05,415] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-06-30 01:27:05,597] [pool-1-thread-4] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-06-30 01:27:07,079] [pool-1-thread-11] Initializing /data/misc/before 1_C2_TP1.tiff: [testng] [2024-06-30 01:27:07,125] [pool-1-thread-2] Initializing /data/victoria/scan4_1hr_20X_.352g_n180p_2z_0.387644res_9int_C2_TP1.tiff: [testng] [2024-06-30 01:27:07,361] [pool-1-thread-9] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-06-30 01:27:07,594] [pool-1-thread-1] Initializing /data/julien/AVECCHRO.TIF: [testng] [2024-06-30 01:27:07,921] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-06-30 01:27:07,962] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs015.TIF: [testng] [2024-06-30 01:27:08,282] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z028.tif: [testng] [2024-06-30 01:27:08,315] [pool-1-thread-1] Initializing /data/josiah/cell-Z30.C1.tiff: [testng] [2024-06-30 01:27:08,358] [pool-1-thread-10] Initializing /data/jay/10-crop-Stack.tif: [testng] [2024-06-30 01:27:08,429] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x64.tiff: [testng] [2024-06-30 01:27:08,763] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z011.tif: [testng] [2024-06-30 01:27:08,822] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips_fourteen.tiff: [testng] [2024-06-30 01:27:08,937] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-06-30 01:27:09,109] [pool-1-thread-10] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-06-30 01:27:09,184] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-06-30 01:27:09,294] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0206.TIF: [testng] [2024-06-30 01:27:09,519] [pool-1-thread-11] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-06-30 01:27:09,708] [pool-1-thread-2] Initializing /data/stephane/F3L1A_DNA 2.tif: [testng] [2024-06-30 01:27:10,378] [pool-1-thread-1] Initializing /data/lzw/bigtest5.tif: [testng] [2024-06-30 01:27:10,450] [pool-1-thread-11] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-06-30 01:27:10,476] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z051.tif: [testng] [2024-06-30 01:27:10,593] [pool-1-thread-9] Initializing /data/curtis/images24.tiff: [testng] [2024-06-30 01:27:10,898] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-06-30 01:27:11,112] [pool-1-thread-11] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-06-30 01:27:13,132] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-06-30 01:27:13,190] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z036.tif: [testng] [2024-06-30 01:27:13,381] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] [2024-06-30 01:27:13,443] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x48.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 4 minutes 50 seconds Finished: SUCCESS