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Started by upstream project "BIOFORMATS-test-repo" build number 116 originally caused by: Started by upstream project "Trigger" build number 133 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins6235406840452658230.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_18024_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:29,618 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:29,619 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:21:29,619 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:29,620 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:29,621 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:29,621 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:29,621 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:29,621 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:29,622 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:29,622 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:29,623 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:29,623 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:29,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:29,805 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:29,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:29,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:29,834 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:29,834 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:29,835 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:29,835 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:29,835 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:21:29,836 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:21:29,836 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 214 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-10 01:21:29,845] [main] java.version = 17.0.2 [testng] 01:21:29,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:29,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:29,901 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-10_01-21-29.log] [testng] 01:21:29,903 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-07-10 01:21:29,906] [main] testng.directory = /data [testng] [2024-07-10 01:21:29,906] [main] testng.configDirectory = /config [testng] [2024-07-10 01:21:29,915] [main] testng.multiplier = 1.0 [testng] [2024-07-10 01:21:29,916] [main] testng.in-memory = false [testng] [2024-07-10 01:21:29,916] [main] testng.allow-missing = false [testng] [2024-07-10 01:21:29,916] [main] user.language = en [testng] [2024-07-10 01:21:29,916] [main] user.country = ${user.country} [testng] [2024-07-10 01:21:29,916] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-10 01:21:45,783] [main] ---------------------------------------- [testng] [2024-07-10 01:21:45,783] [main] Total files: 283 [testng] [2024-07-10 01:21:45,783] [main] Scan time: 15.867 s (56 ms/file) [testng] [2024-07-10 01:21:45,783] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-10 01:29:46,160] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 01:29:46,160 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:29:46,161 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:46,162 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-10_01-29-46.log] [testng] 01:29:46,162 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63a80e20 - End of configuration. [testng] [2024-07-10 01:29:46,206] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] 01:29:46,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:29:46,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:46,207 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-10_01-29-46.log] [testng] 01:29:46,207 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62e48ca7 - End of configuration. [testng] [2024-07-10 01:29:46,283] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] 01:29:46,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:29:46,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:46,284 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-10_01-29-46.log] [testng] 01:29:46,285 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4cdaec6d - End of configuration. [testng] [2024-07-10 01:29:46,375] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] 01:29:46,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:29:46,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:46,376 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-10_01-29-46.log] [testng] 01:29:46,377 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62c78043 - End of configuration. [testng] [2024-07-10 01:29:46,460] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] 01:29:46,460 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:29:46,460 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:46,461 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-10_01-29-46.log] [testng] 01:29:46,461 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ced4a99 - End of configuration. [testng] [2024-07-10 01:29:46,528] [pool-1-thread-8] Initializing /data/qa-17270/image1.oir: [testng] 01:29:46,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:29:46,528 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:46,529 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-10_01-29-46.log] [testng] 01:29:46,530 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3eea36a3 - End of configuration. [testng] [2024-07-10 01:29:46,607] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir: [testng] 01:29:46,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:29:46,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:46,608 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-10_01-29-46.log] [testng] 01:29:46,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@759d77a5 - End of configuration. [testng] [2024-07-10 01:30:02,086] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] 01:30:02,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:30:02,087 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:02,088 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-10_01-30-02.log] [testng] 01:30:02,089 |-INFO in ch.qos.logback.core.sift.SiftProcessor@89c4689 - End of configuration. [testng] [2024-07-10 01:30:02,142] [pool-1-thread-5] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:30:02,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:30:02,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:02,144 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-10_01-30-02.log] [testng] 01:30:02,144 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54d93867 - End of configuration. [testng] [2024-07-10 01:30:02,173] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] 01:30:02,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:30:02,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:02,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-10_01-30-02.log] [testng] 01:30:02,176 |-INFO in ch.qos.logback.core.sift.SiftProcessor@332cc95 - End of configuration. [testng] [2024-07-10 01:30:02,270] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] 01:30:02,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:30:02,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:02,271 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-10_01-30-02.log] [testng] 01:30:02,271 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20984af4 - End of configuration. [testng] [2024-07-10 01:30:02,319] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] 01:30:02,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:30:02,320 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:02,322 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-10_01-30-02.log] [testng] 01:30:02,323 |-INFO in ch.qos.logback.core.sift.SiftProcessor@295f4c7e - End of configuration. [testng] [2024-07-10 01:30:05,277] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-07-10 01:30:05,449] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-07-10 01:30:05,616] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2024-07-10 01:30:06,129] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-07-10 01:30:06,200] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-07-10 01:30:06,266] [pool-1-thread-6] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-07-10 01:30:06,295] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-07-10 01:30:06,374] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-07-10 01:30:06,509] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir: [testng] [2024-07-10 01:30:07,904] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-07-10 01:30:08,317] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi: [testng] [2024-07-10 01:30:09,184] [pool-1-thread-3] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-07-10 01:30:09,305] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2024-07-10 01:30:09,417] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-07-10 01:30:09,509] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-07-10 01:30:09,588] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2024-07-10 01:30:09,675] [pool-1-thread-9] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-07-10 01:30:53,730] [pool-1-thread-8] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-07-10 01:30:53,802] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-07-10 01:30:54,590] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-07-10 01:30:54,652] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-07-10 01:30:54,953] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-07-10 01:30:55,027] [pool-1-thread-11] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-07-10 01:30:55,198] [pool-1-thread-8] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2024-07-10 01:30:55,242] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2024-07-10 01:30:55,317] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-07-10 01:30:55,617] [pool-1-thread-2] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-07-10 01:30:59,948] [pool-1-thread-1] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-07-10 01:31:00,313] [pool-1-thread-10] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-07-10 01:31:00,726] [pool-1-thread-11] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-07-10 01:31:00,800] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-07-10 01:31:01,029] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-07-10 01:31:01,146] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2024-07-10 01:31:02,444] [pool-1-thread-8] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-07-10 01:31:03,229] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-07-10 01:31:03,304] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.oir: [testng] [2024-07-10 01:31:03,657] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-07-10 01:31:04,226] [pool-1-thread-3] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-07-10 01:31:04,454] [pool-1-thread-8] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-07-10 01:31:04,781] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-07-10 01:31:05,163] [pool-1-thread-5] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-07-10 01:31:05,708] [pool-1-thread-1] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-07-10 01:31:05,998] [pool-1-thread-11] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-07-10 01:31:06,206] [pool-1-thread-6] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-07-10 01:31:06,263] [pool-1-thread-3] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-07-10 01:31:07,023] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2024-07-10 01:31:07,169] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-07-10 01:31:07,484] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-07-10 01:31:07,565] [pool-1-thread-8] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-07-10 01:31:07,830] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-07-10 01:31:07,888] [pool-1-thread-6] Initializing 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Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-07-10 01:31:41,600] [pool-1-thread-3] Initializing /data/olympus/XYZt.oir: [testng] [2024-07-10 01:31:43,152] [pool-1-thread-1] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2024-07-10 01:31:43,394] [pool-1-thread-10] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-07-10 01:31:43,486] [pool-1-thread-5] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-07-10 01:31:43,926] [pool-1-thread-4] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-07-10 01:31:44,422] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-07-10 01:31:44,603] [pool-1-thread-10] Initializing /data/qa-17922/example_multipart.oir: [testng] [2024-07-10 01:32:03,518] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-07-10 01:32:06,967] [pool-1-thread-6] Initializing 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[testng] [2024-07-10 01:32:09,425] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-07-10 01:32:09,474] [pool-1-thread-5] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-07-10 01:32:09,833] [pool-1-thread-8] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-07-10 01:32:09,880] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-07-10 01:32:10,103] [pool-1-thread-12] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [2024-07-10 01:32:10,738] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-07-10 01:32:10,948] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-07-10 01:32:11,755] [pool-1-thread-6] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-07-10 01:32:11,800] [pool-1-thread-8] Initializing 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Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] [2024-07-10 01:32:14,734] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2024-07-10 01:32:14,777] [pool-1-thread-3] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-07-10 01:32:14,975] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2024-07-10 01:32:15,180] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-07-10 01:32:15,219] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-07-10 01:32:15,856] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2024-07-10 01:32:16,159] [pool-1-thread-8] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2024-07-10 01:32:16,245] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2024-07-10 01:32:16,363] [pool-1-thread-12] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-07-10 01:32:16,753] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-07-10 01:32:16,922] [pool-1-thread-2] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-07-10 01:32:17,498] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2024-07-10 01:32:19,893] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2024-07-10 01:32:19,968] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-07-10 01:32:20,090] [pool-1-thread-3] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-07-10 01:32:20,811] [pool-1-thread-8] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-07-10 01:32:20,921] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-07-10 01:32:21,237] [pool-1-thread-12] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2024-07-10 01:32:21,338] [pool-1-thread-3] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-07-10 01:32:21,713] [pool-1-thread-5] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-07-10 01:32:21,967] [pool-1-thread-2] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2024-07-10 01:32:22,686] [pool-1-thread-6] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-07-10 01:32:22,926] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2024-07-10 01:32:23,540] [pool-1-thread-5] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-07-10 01:32:27,744] [pool-1-thread-8] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2024-07-10 01:32:27,875] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-07-10 01:32:28,268] [pool-1-thread-12] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-07-10 01:32:28,470] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2024-07-10 01:32:29,127] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-07-10 01:32:29,229] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-07-10 01:32:29,690] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-07-10 01:32:30,335] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2024-07-10 01:32:30,398] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-07-10 01:32:31,224] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2024-07-10 01:32:31,421] [pool-1-thread-3] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-07-10 01:32:31,609] [pool-1-thread-12] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-07-10 01:32:32,148] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2024-07-10 01:32:34,204] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2024-07-10 01:32:34,291] [pool-1-thread-6] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-07-10 01:32:34,501] [pool-1-thread-12] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-07-10 01:32:35,755] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2024-07-10 01:32:35,840] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-07-10 01:32:38,845] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-07-10 01:32:40,802] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-07-10 01:32:40,861] [pool-1-thread-3] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2024-07-10 01:32:41,812] [pool-1-thread-1] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-07-10 01:32:42,705] [pool-1-thread-3] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-07-10 01:32:43,051] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] [2024-07-10 01:32:43,300] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-07-10 01:32:44,747] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-07-10 01:32:44,925] [pool-1-thread-2] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2024-07-10 01:32:46,019] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-07-10 01:32:46,184] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-07-10 01:32:47,461] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-07-10 01:32:48,097] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 40 minutes 48 seconds Finished: SUCCESS