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Started by upstream project "BIOFORMATS-test-repo" build number 116 originally caused by: Started by upstream project "Trigger" build number 133 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins13441335983295021649.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_18025_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:32,515 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:32,518 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:21:32,518 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:32,519 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:32,520 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:32,520 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:32,521 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:32,521 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:32,521 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:32,522 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:32,523 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:32,523 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:32,707 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:32,707 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:32,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:32,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:32,742 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:32,742 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:32,742 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:32,742 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:32,743 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:21:32,744 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:21:32,744 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 223 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-10 01:21:32,755] [main] java.version = 17.0.2 [testng] 01:21:32,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:32,759 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:32,803 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-10_01-21-32.log] [testng] 01:21:32,805 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-07-10 01:21:32,807] [main] testng.directory = /data [testng] [2024-07-10 01:21:32,807] [main] testng.configDirectory = /config [testng] [2024-07-10 01:21:32,817] [main] testng.multiplier = 1.0 [testng] [2024-07-10 01:21:32,818] [main] testng.in-memory = false [testng] [2024-07-10 01:21:32,818] [main] testng.allow-missing = false [testng] [2024-07-10 01:21:32,818] [main] user.language = en [testng] [2024-07-10 01:21:32,818] [main] user.country = ${user.country} [testng] [2024-07-10 01:21:32,819] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-10 01:21:46,878] [main] ---------------------------------------- [testng] [2024-07-10 01:21:46,878] [main] Total files: 4426 [testng] [2024-07-10 01:21:46,879] [main] Scan time: 14.059 s (3 ms/file) [testng] [2024-07-10 01:21:46,879] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-10 01:23:42,285] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0221.TIF: [testng] 01:23:42,285 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:42,285 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,287 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-10_01-23-42.log] [testng] 01:23:42,287 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ecf0fe3 - End of configuration. [testng] [2024-07-10 01:23:42,341] [pool-1-thread-12] Initializing /data/public/libtiff/jim___cg.tif: [testng] 01:23:42,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:42,341 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,342 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-10_01-23-42.log] [testng] 01:23:42,343 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74534095 - End of configuration. [testng] [2024-07-10 01:23:42,370] [pool-1-thread-11] Initializing /data/chris-wood/15ms full low light.tif: [testng] 01:23:42,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:42,371 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,372 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-10_01-23-42.log] [testng] 01:23:42,372 |-INFO in ch.qos.logback.core.sift.SiftProcessor@445d15ae - End of configuration. [testng] [2024-07-10 01:23:42,422] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z006.tif: [testng] 01:23:42,422 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:23:42,422 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,423 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-10_01-23-42.log] [testng] 01:23:42,424 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2028a983 - End of configuration. [testng] [2024-07-10 01:23:42,455] [pool-1-thread-9] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] 01:23:42,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:23:42,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,457 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-10_01-23-42.log] [testng] 01:23:42,457 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3512dae3 - End of configuration. [testng] [2024-07-10 01:23:42,491] [pool-1-thread-8] Initializing /data/damian/18m.tiff: [testng] 01:23:42,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:23:42,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,492 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-10_01-23-42.log] [testng] 01:23:42,492 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fe126e6 - End of configuration. [testng] [2024-07-10 01:23:42,530] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z016.tif: [testng] 01:23:42,530 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:23:42,530 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,531 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-10_01-23-42.log] [testng] 01:23:42,531 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39c3abd5 - End of configuration. [testng] [2024-07-10 01:23:42,560] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x16.tiff: [testng] 01:23:42,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:23:42,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,561 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-10_01-23-42.log] [testng] 01:23:42,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e543e03 - End of configuration. [testng] [2024-07-10 01:23:42,583] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] 01:23:42,583 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:23:42,583 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,584 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-10_01-23-42.log] [testng] 01:23:42,584 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53ea55e7 - End of configuration. [testng] [2024-07-10 01:23:42,627] [pool-1-thread-4] Initializing /data/ascb/CYT-92_PasolliMouse1b_4800.tif: [testng] 01:23:42,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:23:42,627 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,628 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-10_01-23-42.log] [testng] 01:23:42,628 |-INFO in ch.qos.logback.core.sift.SiftProcessor@424a807d - End of configuration. [testng] [2024-07-10 01:23:42,682] [pool-1-thread-3] Initializing /data/josiah/cell-Z39.C1.tiff: [testng] 01:23:42,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:23:42,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,683 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-10_01-23-42.log] [testng] 01:23:42,683 |-INFO in ch.qos.logback.core.sift.SiftProcessor@200b0321 - End of configuration. [testng] [2024-07-10 01:23:42,710] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] 01:23:42,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:23:42,711 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:42,712 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-10_01-23-42.log] [testng] 01:23:42,712 |-INFO in ch.qos.logback.core.sift.SiftProcessor@659eeb5a - End of configuration. [testng] [2024-07-10 01:23:44,967] [pool-1-thread-1] Initializing /data/misc/mri-stack.tif: [testng] [2024-07-10 01:23:45,005] [pool-1-thread-6] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-07-10 01:23:45,030] [pool-1-thread-12] Initializing /data/sarah/FITC left 100% 1x mag00000.tif: [testng] [2024-07-10 01:23:45,058] [pool-1-thread-10] Initializing /data/josiah/cell-Z39.C0.tiff: [testng] [2024-07-10 01:23:45,095] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-07-10 01:23:45,125] [pool-1-thread-5] Initializing /data/paul-van-schayck/myfile.tif: [testng] [2024-07-10 01:23:45,147] [pool-1-thread-2] Initializing /data/public/condensation/A5.pattern2.tif: [testng] [2024-07-10 01:23:45,187] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-07-10 01:23:45,227] [pool-1-thread-3] Initializing /data/josiah/cell-Z32.C1.tiff: [testng] [2024-07-10 01:23:45,254] [pool-1-thread-9] Initializing /data/damian/00m.tiff: [testng] [2024-07-10 01:23:46,129] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-07-10 01:23:46,203] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-07-10 01:23:46,383] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [2024-07-10 01:23:46,407] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z033.tif: [testng] [2024-07-10 01:23:46,440] [pool-1-thread-2] Initializing /data/marc/ball48_LOCI_RGB_autoscale_10x.tif: [testng] [2024-07-10 01:23:46,488] [pool-1-thread-10] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-07-10 01:23:46,529] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs016.TIF: [testng] [2024-07-10 01:23:46,568] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x64.tiff: [testng] [2024-07-10 01:23:46,590] [pool-1-thread-7] Initializing /data/public/condensation/A6.pattern2.tif: [testng] [2024-07-10 01:23:46,791] [pool-1-thread-11] Initializing /data/josiah/cell-Z18.C1.tiff: [testng] [2024-07-10 01:23:47,003] [pool-1-thread-6] Initializing /data/josiah/cell-Z0.C1.tiff: [testng] [2024-07-10 01:23:47,075] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-07-10 01:23:47,119] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-07-10 01:23:47,358] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-07-10 01:23:47,410] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-07-10 01:23:47,430] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-07-10 01:23:47,676] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] [2024-07-10 01:23:47,771] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-07-10 01:23:47,834] [pool-1-thread-10] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs007.TIF: [testng] [2024-07-10 01:23:47,898] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-07-10 01:23:47,925] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] [2024-07-10 01:23:47,994] [pool-1-thread-8] Initializing /data/misc/mri-old.mov: [testng] [2024-07-10 01:23:48,145] [pool-1-thread-6] Initializing /data/samples/cielab/Ski_TC8-03_sRGB.tif: [testng] [2024-07-10 01:23:48,274] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-07-10 01:23:48,320] [pool-1-thread-12] Initializing /data/public/condensation/B12.pattern1.tif: [testng] [2024-07-10 01:23:48,441] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z056.tif: [testng] [2024-07-10 01:23:48,470] [pool-1-thread-5] Initializing /data/julien/CRBMquadtour.tif: [testng] [2024-07-10 01:23:53,859] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z007.tif: [testng] [2024-07-10 01:23:53,915] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z012.tif: [testng] [2024-07-10 01:23:54,077] [pool-1-thread-1] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-07-10 01:23:54,426] [pool-1-thread-7] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-07-10 01:23:54,486] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z002.tif: [testng] [2024-07-10 01:23:54,519] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-07-10 01:23:54,588] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-07-10 01:23:54,651] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-05.tiff: [testng] [2024-07-10 01:23:54,701] [pool-1-thread-1] 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[pool-1-thread-6] Initializing /data/public/condensation/E4.pattern8.tif: [testng] [2024-07-10 01:25:32,501] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z039.tif: [testng] [2024-07-10 01:25:32,732] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x48.tiff: [testng] [2024-07-10 01:25:32,818] [pool-1-thread-9] Initializing /data/public/condensation/E4.pattern5.tif: [testng] [2024-07-10 01:25:33,018] [pool-1-thread-6] Initializing /data/ascb/CYT-151_Raben_Noncontractile.tif: [testng] [2024-07-10 01:25:33,301] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z037.tif: [testng] [2024-07-10 01:25:33,354] [pool-1-thread-7] Initializing /data/lzw/test.tif: [testng] [2024-07-10 01:25:33,567] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] [2024-07-10 01:25:33,761] [pool-1-thread-7] Initializing /data/josiah/cell-Z3.C1.tiff: [testng] [2024-07-10 01:25:33,827] [pool-1-thread-9] Initializing 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[testng] [2024-07-10 01:25:36,508] [pool-1-thread-9] Initializing /data/ascb/CYT-35_FriendOsmiumEpididymis_4800.tif: [testng] [2024-07-10 01:25:36,630] [pool-1-thread-7] Initializing /data/kevino/_BF_00001.tif: [testng] [2024-07-10 01:25:37,184] [pool-1-thread-11] Initializing /data/edward/TestDoc2.tif: [testng] [2024-07-10 01:25:37,341] [pool-1-thread-7] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-07-10 01:25:37,677] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z040.tif: [testng] [2024-07-10 01:25:38,241] [pool-1-thread-4] Initializing /data/curtis/map/jumps-over: [testng] [2024-07-10 01:25:38,336] [pool-1-thread-12] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-07-10 01:25:39,126] [pool-1-thread-4] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-07-10 01:25:40,271] [pool-1-thread-7] Initializing /data/public/libtiff/cramps-tile.tif: [testng] [2024-07-10 01:25:40,302] 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/data/ascb/CYT-2_BaintonBoylesPhagocytosisYeastB_4800.tif: [testng] [2024-07-10 01:25:50,250] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs012.TIF: [testng] [2024-07-10 01:25:51,434] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-07-10 01:25:51,498] [pool-1-thread-6] Initializing /data/jae/first image.tif: [testng] [2024-07-10 01:25:51,731] [pool-1-thread-9] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-07-10 01:25:51,826] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-07-10 01:25:51,906] [pool-1-thread-6] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-07-10 01:25:54,501] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-07-10 01:25:54,525] [pool-1-thread-4] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-07-10 01:25:54,697] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z037.tif: [testng] [2024-07-10 01:25:54,842] [pool-1-thread-10] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-07-10 01:25:54,955] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z044.tif: [testng] [2024-07-10 01:25:55,070] [pool-1-thread-9] Initializing /data/marc/ball48_original_10x.tif: [testng] [2024-07-10 01:25:55,107] [pool-1-thread-3] Initializing /data/ascb/bad/FND-17_FawcettNucleus_4800.tif: [testng] [2024-07-10 01:25:55,269] [pool-1-thread-10] Initializing /data/damian/15m.tiff: [testng] [2024-07-10 01:25:55,306] [pool-1-thread-4] Initializing /data/ascb/bad/FND-21_FawcettPhillipsTransverse_4800.tif: [testng] [2024-07-10 01:25:55,551] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-07-10 01:25:55,630] [pool-1-thread-2] Initializing /data/josiah/cell-Z35.C1.tiff: [testng] [2024-07-10 01:25:55,694] [pool-1-thread-10] Initializing /data/ascb/FND-12_PorterFranziniSarcoplasmic_4800.tif: [testng] [2024-07-10 01:25:55,851] [pool-1-thread-11] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-07-10 01:25:56,031] [pool-1-thread-2] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-07-10 01:25:56,111] [pool-1-thread-8] Initializing /data/public/libtiff/strike.tif: [testng] [2024-07-10 01:25:56,341] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-07-10 01:25:56,367] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-07-10 01:25:56,556] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-60.tiff: [testng] [2024-07-10 01:25:56,766] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z006.tif: [testng] [2024-07-10 01:25:56,788] [pool-1-thread-8] Initializing /data/stephane/d02&007.tif: [testng] [2024-07-10 01:25:56,854] [pool-1-thread-11] Initializing /data/jae/Rat_Hippocampal_Neuron.tif: [testng] [2024-07-10 01:25:57,150] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z012.tif: [testng] [2024-07-10 01:25:57,231] [pool-1-thread-8] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-07-10 01:25:57,473] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-07-10 01:25:57,496] [pool-1-thread-11] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-07-10 01:25:59,009] [pool-1-thread-9] Initializing /data/misc/before 1_C2_TP1.tiff: [testng] [2024-07-10 01:25:59,337] [pool-1-thread-2] Initializing /data/victoria/scan4_1hr_20X_.352g_n180p_2z_0.387644res_9int_C2_TP1.tiff: [testng] [2024-07-10 01:25:59,400] [pool-1-thread-8] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-07-10 01:25:59,506] [pool-1-thread-7] Initializing /data/julien/AVECCHRO.TIF: [testng] [2024-07-10 01:25:59,543] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-07-10 01:25:59,768] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs015.TIF: [testng] [2024-07-10 01:25:59,863] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z028.tif: [testng] [2024-07-10 01:25:59,908] [pool-1-thread-7] Initializing /data/josiah/cell-Z30.C1.tiff: [testng] [2024-07-10 01:25:59,998] [pool-1-thread-12] Initializing /data/jay/10-crop-Stack.tif: [testng] [2024-07-10 01:26:00,037] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x64.tiff: [testng] [2024-07-10 01:26:00,228] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z011.tif: [testng] [2024-07-10 01:26:00,256] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips_fourteen.tiff: [testng] [2024-07-10 01:26:00,315] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-07-10 01:26:00,504] [pool-1-thread-9] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-07-10 01:26:00,547] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-07-10 01:26:00,571] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0206.TIF: [testng] [2024-07-10 01:26:00,877] [pool-1-thread-12] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-07-10 01:26:00,957] [pool-1-thread-8] Initializing /data/stephane/F3L1A_DNA 2.tif: [testng] [2024-07-10 01:26:01,231] [pool-1-thread-7] Initializing /data/lzw/bigtest5.tif: [testng] [2024-07-10 01:26:01,376] [pool-1-thread-2] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-07-10 01:26:01,464] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z051.tif: [testng] [2024-07-10 01:26:01,724] [pool-1-thread-12] Initializing /data/curtis/images24.tiff: [testng] [2024-07-10 01:26:01,796] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-07-10 01:26:02,095] [pool-1-thread-12] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-07-10 01:26:04,716] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-07-10 01:26:04,736] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z036.tif: [testng] [2024-07-10 01:26:04,823] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] [2024-07-10 01:26:04,974] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x48.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 5 seconds Finished: SUCCESS