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Started by upstream project "BIOFORMATS-test-repo" build number 118 originally caused by: Started by upstream project "Trigger" build number 135 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins4794413163182078110.sh + '[' zeiss-zvi = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_18495_merge_ci -v /uod/idr/repos/curated/zeiss-zvi:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-zvi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:47:32,202 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:47:32,204 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 02:47:32,204 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:47:32,205 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:47:32,205 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:47:32,205 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:47:32,206 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:47:32,206 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:47:32,206 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:47:32,207 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:47:32,207 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:47:32,207 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:47:32,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:47:32,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:47:32,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:47:32,459 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:47:32,467 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:47:32,467 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:47:32,467 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:47:32,468 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:47:32,468 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 02:47:32,469 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 02:47:32,469 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 263 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-12 02:47:32,478] [main] java.version = 1.8.0_342 [testng] 02:47:32,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:47:32,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:47:32,528 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-12_02-47-32.log] [testng] 02:47:32,529 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-12 02:47:32,531] [main] testng.directory = /data [testng] [2024-07-12 02:47:32,532] [main] testng.configDirectory = /config [testng] [2024-07-12 02:47:32,544] [main] testng.multiplier = 1.0 [testng] [2024-07-12 02:47:32,544] [main] testng.in-memory = false [testng] [2024-07-12 02:47:32,544] [main] testng.allow-missing = false [testng] [2024-07-12 02:47:32,544] [main] user.language = en [testng] [2024-07-12 02:47:32,545] [main] user.country = ${user.country} [testng] [2024-07-12 02:47:32,545] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-12 02:47:35,396] [main] ---------------------------------------- [testng] [2024-07-12 02:47:35,396] [main] Total files: 157 [testng] [2024-07-12 02:47:35,396] [main] Scan time: 2.851 s (18 ms/file) [testng] [2024-07-12 02:47:35,396] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 150 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-12 02:53:34,214] [pool-1-thread-1] Initializing /data/gaetan/gml16_cenp-fitc_dapi_2.zvi: [testng] 02:53:34,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:53:34,215 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:34,216 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-12_02-53-34.log] [testng] 02:53:34,216 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4df26651 - End of configuration. [testng] [2024-07-12 02:53:38,286] [pool-1-thread-12] Initializing /data/sebastien/test.zvi: [testng] 02:53:38,286 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:53:38,286 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:38,287 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-12_02-53-38.log] [testng] 02:53:38,288 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2af1c920 - End of configuration. [testng] [2024-07-12 02:53:38,726] [pool-1-thread-11] Initializing /data/markus/HighSpeedParas.zvi: [testng] 02:53:38,726 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:53:38,727 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:38,727 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-12_02-53-38.log] [testng] 02:53:38,728 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43be0b34 - End of configuration. [testng] [2024-07-12 02:53:44,890] [pool-1-thread-10] Initializing /data/dietmar/imagej-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0016.tif: [testng] 02:53:44,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:53:44,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:44,892 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-12_02-53-44.log] [testng] 02:53:44,892 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48b1b5b - End of configuration. [testng] [2024-07-12 02:53:44,936] [pool-1-thread-9] Initializing /data/thomas/test_axiocam_3_1.zvi: [testng] 02:53:44,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:53:44,936 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:44,936 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-12_02-53-44.log] [testng] 02:53:44,937 |-INFO in ch.qos.logback.core.sift.SiftProcessor@652ce1c7 - End of configuration. [testng] [2024-07-12 02:53:44,969] [pool-1-thread-8] Initializing /data/pki/E-07.zvi: [testng] 02:53:44,969 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:53:44,969 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:44,970 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-12_02-53-44.log] [testng] 02:53:44,970 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bba4b1a - End of configuration. [testng] [2024-07-12 02:53:47,937] [pool-1-thread-7] Initializing /data/markus/Mouse-newborn-panorama.zvi: [testng] 02:53:47,937 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:53:47,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:47,938 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-12_02-53-47.log] [testng] 02:53:47,938 |-INFO in ch.qos.logback.core.sift.SiftProcessor@495170ae - End of configuration. [testng] [2024-07-12 02:53:48,373] [pool-1-thread-6] Initializing /data/gaetan/gml16_cenp-fitc_dapi_19.zvi: [testng] 02:53:48,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:53:48,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:48,374 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-12_02-53-48.log] [testng] 02:53:48,374 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25ab8a2b - End of configuration. [testng] [2024-07-12 02:53:53,631] [pool-1-thread-5] Initializing /data/eirinn/Correctly-tiled.JPG: [testng] 02:53:53,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:53:53,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:53,632 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-12_02-53-53.log] [testng] 02:53:53,632 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8690e73 - End of configuration. [testng] [2024-07-12 02:53:53,646] [pool-1-thread-4] Initializing /data/jonas/10_0907_multidrug-0001_AB01_08.zvi: [testng] 02:53:53,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:53:53,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:53,646 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-12_02-53-53.log] [testng] 02:53:53,647 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64415a2a - End of configuration. [testng] [2024-07-12 02:53:55,497] [pool-1-thread-3] Initializing /data/markus/PhaseGFP-MosaiX-Timelapse_Tiles.zvi: [testng] 02:53:55,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:53:55,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:55,498 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-12_02-53-55.log] [testng] 02:53:55,498 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37c68a64 - End of configuration. [testng] [2024-07-12 02:53:57,313] [pool-1-thread-2] Initializing /data/georg/Recorder-Stream-0003.zvi: [testng] 02:53:57,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:53:57,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:53:57,314 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-12_02-53-57.log] [testng] 02:53:57,314 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16b6674 - End of configuration. [testng] [2024-07-12 02:53:59,391] [pool-1-thread-5] Initializing /data/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.zvi: [testng] [2024-07-12 02:54:00,707] [pool-1-thread-10] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast.zvi: [testng] [2024-07-12 02:54:01,352] [pool-1-thread-9] Initializing /data/darren/section0001_w1.zvi: [testng] [2024-07-12 02:54:04,788] [pool-1-thread-2] Initializing /data/dietmar/imagej-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0010.tif: [testng] [2024-07-12 02:54:05,257] [pool-1-thread-12] Initializing /data/kmichel/20110209_region1_1505_atp.zvi: [testng] [2024-07-12 02:54:05,550] [pool-1-thread-2] Initializing /data/markus/6ch-Z-stack_deconvolved.zvi: [testng] [2024-07-12 02:54:06,696] [pool-1-thread-12] Initializing /data/converted/2ChZ.zvi: [testng] [2024-07-12 02:54:07,433] [pool-1-thread-12] Initializing /data/converted/mri-stack.zvi: [testng] [2024-07-12 02:54:07,619] [pool-1-thread-12] Initializing /data/gaetan/gml16_cenp-fitc_dapi_16.zvi: [testng] [2024-07-12 02:54:14,307] [pool-1-thread-10] Initializing /data/ville/MultiCh-RGB/pollen_bw.zvi: [testng] [2024-07-12 02:54:15,305] [pool-1-thread-2] Initializing /data/karsten/Bild2.zvi: [testng] [2024-07-12 02:54:15,605] [pool-1-thread-10] Initializing /data/kelsey/432x342BW.zvi: [testng] [2024-07-12 02:54:15,765] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_13.zvi: [testng] [2024-07-12 02:54:20,300] [pool-1-thread-1] Initializing /data/oli/10 x smc 2.zvi: [testng] [2024-07-12 02:54:20,357] [pool-1-thread-5] Initializing /data/rolf/example_2-c3.jpg: [testng] [2024-07-12 02:54:20,414] [pool-1-thread-10] Initializing /data/rachel/40K 30s A1.zvi: [testng] [2024-07-12 02:54:20,995] [pool-1-thread-9] Initializing /data/rolf/example_1-2010_11_25.zvi: [testng] [2024-07-12 02:54:21,498] [pool-1-thread-5] Initializing /data/oli/10 x smc 2 neg.zvi: [testng] [2024-07-12 02:54:21,571] [pool-1-thread-1] Initializing /data/pradeep/MCF10A_Scratch-0003_CatGDsiNeg.zvi: [testng] [2024-07-12 02:54:21,686] [pool-1-thread-10] Initializing /data/oli/10 x smc 1.zvi: [testng] [2024-07-12 02:54:22,110] [pool-1-thread-6] Initializing /data/rachel/40K 30s A2.zvi: [testng] [2024-07-12 02:54:22,156] [pool-1-thread-7] Initializing /data/gaetan/gml16_cenp-fitc_dapi_12.zvi: [testng] [2024-07-12 02:54:28,265] [pool-1-thread-10] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.zvi: [testng] [2024-07-12 02:54:28,826] [pool-1-thread-5] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast-widefield.zvi: [testng] [2024-07-12 02:54:29,145] [pool-1-thread-9] Initializing /data/dietmar/hMADS-24h-BAC1-7-AF647-AF488-RHO-1day-hyb-CSK-2007-06-29-0008_Position(113).zvi: [testng] [2024-07-12 02:54:30,402] [pool-1-thread-4] Initializing /data/christophe/Exemple_Zeiss_ROI.zvi: [testng] [2024-07-12 02:54:30,650] [pool-1-thread-6] Initializing /data/qa-21711/test.zvi: [testng] [2024-07-12 02:54:35,442] [pool-1-thread-1] Initializing /data/lior/live+cf5b.zvi: [testng] [2024-07-12 02:54:35,547] [pool-1-thread-3] Initializing /data/strand/2Colors1Plane.zvi: [testng] [2024-07-12 02:54:35,653] [pool-1-thread-8] Initializing /data/monica/Monica_elegans_movie.zvi: [testng] [2024-07-12 02:54:36,494] [pool-1-thread-4] Initializing /data/miso/Aufnahme-184058-0002.zvi: [testng] [2024-07-12 02:54:38,933] [pool-1-thread-1] Initializing /data/eirinn/12_2_2009-16-Hes5-BrdU-Proper_Position(52).zvi: [testng] [2024-07-12 02:54:40,376] [pool-1-thread-9] Initializing /data/markus/Branchiostoma_6x12_MosaiX_Tiles_color.zvi: [testng] [2024-07-12 02:54:43,616] [pool-1-thread-12] Initializing /data/gaetan/gml16_cenp-fitc_dapi_9.zvi: [testng] [2024-07-12 02:54:46,093] [pool-1-thread-5] Initializing /data/sam/ADDLs3-48hrsMouse-Vib50-Biotyn-IHC-s1c2r2-5x-001-07.zvi: [testng] [2024-07-12 02:54:46,672] [pool-1-thread-11] Initializing /data/dietmar/DAPI-TexasRed-0015.zvi: [testng] [2024-07-12 02:54:48,147] [pool-1-thread-10] Initializing /data/converted/damian.zvi: [testng] [2024-07-12 02:54:48,175] [pool-1-thread-2] Initializing /data/eirinn/Demo-tile.zvi: [testng] [2024-07-12 02:54:48,189] [pool-1-thread-7] Initializing /data/michel/b.zvi: [testng] [2024-07-12 02:54:48,216] [pool-1-thread-4] Initializing /data/joe/test_file_ng_2012.zvi: [testng] [2024-07-12 02:54:48,788] [pool-1-thread-10] Initializing /data/converted/deconvolve6_Pseudo_Tl000_Zs000.zvi: [testng] [2024-07-12 02:54:49,007] [pool-1-thread-2] Initializing /data/oli/10 x smc 4.zvi: [testng] [2024-07-12 02:54:49,163] [pool-1-thread-8] Initializing /data/gaetan/gml16_cenp-fitc_dapi_25.zvi: [testng] [2024-07-12 02:54:52,732] [pool-1-thread-7] Initializing /data/othmar/z-stack.zvi: [testng] [2024-07-12 02:54:56,924] [pool-1-thread-3] Initializing /data/gaetan/gml16_cenp-fitc_dapi_5.zvi: [testng] [2024-07-12 02:54:58,684] [pool-1-thread-10] Initializing /data/oli/10 x smc 1 neg.zvi: [testng] [2024-07-12 02:54:59,313] [pool-1-thread-2] Initializing /data/dietmar/hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-ten.zvi: [testng] [2024-07-12 02:55:00,551] [pool-1-thread-11] Initializing /data/kelsey/1300x1030BW.zvi: [testng] [2024-07-12 02:55:01,220] [pool-1-thread-10] Initializing /data/converted/WTZER_Series76_z003_ch00-with-ROIs.TIF: [testng] [2024-07-12 02:55:01,352] [pool-1-thread-11] Initializing /data/converted/WTZER_Series76_z003_ch00.zvi: [testng] [2024-07-12 02:55:01,524] [pool-1-thread-1] Initializing /data/gaetan/gml16_cenp-fitc_dapi_14.zvi: [testng] [2024-07-12 02:55:08,043] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_22.zvi: [testng] [2024-07-12 02:55:13,855] [pool-1-thread-11] Initializing /data/markus/MosaiX_irregular_Z-stack_with_autofocus.zvi: [testng] [2024-07-12 02:55:15,873] [pool-1-thread-4] Initializing /data/joseph/E-2009_0022.zvi: [testng] [2024-07-12 02:55:16,175] [pool-1-thread-10] Initializing /data/michel/d.zvi: [testng] [2024-07-12 02:55:16,519] [pool-1-thread-10] Initializing /data/dietmar/hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0016.zvi: [testng] [2024-07-12 02:55:17,245] [pool-1-thread-12] Initializing /data/markus/Brain_high_dynamic_range_imaging_Z-stack.zvi: [testng] [2024-07-12 02:55:20,105] [pool-1-thread-10] Initializing /data/michel/a.zvi: [testng] [2024-07-12 02:55:20,292] [pool-1-thread-10] Initializing /data/gaetan/gml16_cenp-fitc_dapi_8.zvi: [testng] [2024-07-12 02:55:22,916] [pool-1-thread-3] Initializing /data/dietmar/138.zvi: [testng] [2024-07-12 02:55:24,497] [pool-1-thread-4] Initializing /data/lior/live+cf2b.zvi: [testng] [2024-07-12 02:55:24,659] [pool-1-thread-8] Initializing /data/darren/section0002_w1.zvi: [testng] [2024-07-12 02:55:25,732] [pool-1-thread-5] Initializing /data/dietmar/137.zvi: [testng] [2024-07-12 02:55:27,664] [pool-1-thread-6] Initializing /data/michel/c.zvi: [testng] [2024-07-12 02:55:27,971] [pool-1-thread-4] Initializing /data/kmichel/20110209_region4_1841_atp.zvi: [testng] [2024-07-12 02:55:28,211] [pool-1-thread-6] Initializing /data/shalin/ibidiuslide1-timelapse3_mid2.zvi: [testng] [2024-07-12 02:55:28,666] [pool-1-thread-3] Initializing /data/vladan/vladan.zvi: [testng] [2024-07-12 02:55:29,590] [pool-1-thread-2] Initializing /data/converted/WTZER_Series76_z003_ch00-with-ROIs.zvi: [testng] [2024-07-12 02:55:29,738] [pool-1-thread-1] Initializing /data/georg/TinCD4 x Gcamp3-2x adult CyD-80uM+blebb-10uM-0001.zvi: [testng] [2024-07-12 02:55:33,828] [pool-1-thread-4] Initializing /data/joseph/E-2009-0004.zvi: [testng] [2024-07-12 02:55:34,074] [pool-1-thread-12] Initializing /data/gaetan/gml16_cenp-fitc_dapi_24.zvi: [testng] [2024-07-12 02:55:39,262] [pool-1-thread-7] Initializing /data/markus/30channels_exposure-series.zvi: [testng] [2024-07-12 02:55:39,386] [pool-1-thread-5] Initializing /data/qa-7332/qa-7332_expected_rendering_ARF1_M90T_01-0002_Position(46)_Gallery.tif: [testng] [2024-07-12 02:55:39,721] [pool-1-thread-6] Initializing /data/gaetan/gml16_cenp-fitc_dapi_4.zvi: [testng] [2024-07-12 02:55:41,266] [pool-1-thread-2] Initializing /data/rolf/example_2.png: [testng] [2024-07-12 02:55:41,371] [pool-1-thread-7] Initializing /data/jeffrey/750-30-03.zvi: [testng] [2024-07-12 02:55:41,559] [pool-1-thread-5] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055.zvi: [testng] [2024-07-12 02:55:42,135] [pool-1-thread-11] Initializing /data/dietmar/bio-formats-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0016.tif: [testng] [2024-07-12 02:55:42,644] [pool-1-thread-4] Initializing /data/eirinn/11_10_2009-01-LCStim-15-10-09_Position(1).zvi: [testng] [2024-07-12 02:55:43,224] [pool-1-thread-8] Initializing /data/gaetan/gml16_cenp-fitc_dapi_23.zvi: [testng] [2024-07-12 02:55:48,524] [pool-1-thread-10] Initializing /data/james/Sylvain_run3_1Gy_Live7-2008-0019.zvi: [testng] [2024-07-12 02:55:48,749] [pool-1-thread-11] Initializing /data/markus/Mouse-newborn-panorama_lossless_compressed.zvi: [testng] [2024-07-12 02:55:49,088] [pool-1-thread-7] Initializing /data/markus/Hypocampus_Tiles_with_stiching.zvi: [testng] [2024-07-12 02:55:50,365] [pool-1-thread-10] Initializing /data/converted/damian-compressed.zvi: [testng] [2024-07-12 02:55:50,399] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_6.zvi: [testng] [2024-07-12 02:55:51,627] [pool-1-thread-5] Initializing /data/kelsey/650x514BW.zvi: [testng] [2024-07-12 02:55:51,764] [pool-1-thread-10] Initializing /data/gaetan/gml16_cenp-fitc_dapi_15.zvi: [testng] [2024-07-12 02:55:57,884] [pool-1-thread-4] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c2.TIF: [testng] [2024-07-12 02:55:58,044] [pool-1-thread-5] Initializing /data/nicolas/image.zvi: [testng] [2024-07-12 02:55:58,757] [pool-1-thread-5] Initializing /data/gaetan/gml16_cenp-fitc_dapi_17.zvi: [testng] [2024-07-12 02:56:06,164] [pool-1-thread-12] Initializing /data/othmar/mozaic.zvi: [testng] [2024-07-12 02:56:07,434] [pool-1-thread-6] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c3.TIF: [testng] [2024-07-12 02:56:07,523] [pool-1-thread-3] Initializing /data/rolf/example_2.tif: [testng] [2024-07-12 02:56:07,784] [pool-1-thread-4] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c4.TIF: [testng] [2024-07-12 02:56:09,513] [pool-1-thread-6] Initializing /data/markus/Smart_Experiment_4ch-T-time-stitched.zvi: [testng] [2024-07-12 02:56:14,101] [pool-1-thread-8] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_c1.TIF: [testng] [2024-07-12 02:56:14,175] [pool-1-thread-4] Initializing /data/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.zvi: [testng] [2024-07-12 02:56:14,235] [pool-1-thread-3] Initializing /data/ville/MultiCh-RGB/pollen_rgb.zvi: [testng] [2024-07-12 02:56:14,871] [pool-1-thread-4] Initializing /data/rolf/example_2-2010_11_25.zvi: [testng] [2024-07-12 02:56:16,146] [pool-1-thread-8] Initializing /data/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.zvi: [testng] [2024-07-12 02:56:16,435] [pool-1-thread-3] Initializing /data/joseph/BEST_EXAMPLE_should_look_like.jpg: [testng] [2024-07-12 02:56:16,669] [pool-1-thread-8] Initializing /data/dietmar/bio-formats-hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-0010.tif: [testng] [2024-07-12 02:56:16,942] [pool-1-thread-4] Initializing /data/jan/SampleStack_Mosaic4x5_comb.zvi: [testng] [2024-07-12 02:56:19,373] [pool-1-thread-11] Initializing /data/nicolas/image.tif: [testng] [2024-07-12 02:56:19,412] [pool-1-thread-2] Initializing /data/gaetan/gml16_cenp-fitc_dapi_3.zvi: [testng] [2024-07-12 02:56:21,054] [pool-1-thread-1] Initializing /data/chris/file01.zvi: [testng] [2024-07-12 02:56:22,354] [pool-1-thread-10] Initializing /data/karsten/247096n3s3s9.zvi: [testng] [2024-07-12 02:56:22,658] [pool-1-thread-5] Initializing /data/converted/2chZT.zvi: [testng] [2024-07-12 02:56:25,332] [pool-1-thread-8] Initializing /data/markus/VivaTome_sample/cell 40 w raw fast-sectioned.zvi: [testng] [2024-07-12 02:56:26,997] [pool-1-thread-6] Initializing /data/eirinn/5_6_2009-DJ9-03_A01_01.zvi: [testng] [2024-07-12 02:56:27,287] [pool-1-thread-7] Initializing /data/sebastien/F1.zvi: [testng] [2024-07-12 02:56:28,212] [pool-1-thread-3] Initializing /data/rolf/example_2-c1.jpg: [testng] [2024-07-12 02:56:28,435] [pool-1-thread-11] Initializing /data/gaetan/gml16_cenp-fitc_dapi_21.zvi: [testng] [2024-07-12 02:56:34,624] [pool-1-thread-3] Initializing /data/qa-7332/ARF1_M90T_01-0002_Position(46).zvi: [testng] [2024-07-12 02:56:35,723] [pool-1-thread-6] Initializing /data/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.zvi: [testng] [2024-07-12 02:56:36,398] [pool-1-thread-1] Initializing /data/gaetan/gml16_cenp-fitc_dapi_11.zvi: [testng] [2024-07-12 02:56:41,766] [pool-1-thread-8] Initializing /data/karsten/Bild1.zvi: [testng] [2024-07-12 02:56:41,794] [pool-1-thread-12] Initializing /data/jonas/10_0907_multidrug-0001_AB01_03.zvi: [testng] [2024-07-12 02:56:44,251] [pool-1-thread-9] Initializing /data/oli/10 x smc 3.zvi: [testng] [2024-07-12 02:56:44,442] [pool-1-thread-5] Initializing /data/markus/Long_TL_CElegans.zvi: [testng] [2024-07-12 02:56:59,743] [pool-1-thread-10] Initializing /data/gaetan/gml16_cenp-fitc_dapi_1.zvi: [testng] [2024-07-12 02:57:04,656] [pool-1-thread-2] Initializing /data/susan/BY4741NQ2.zvi: [testng] [2024-07-12 02:57:05,208] [pool-1-thread-3] Initializing /data/eirinn/12_16_2009-01-Tara-HD-Triple-5to15_Position(1)5.zvi: [testng] [2024-07-12 02:57:06,795] [pool-1-thread-8] Initializing /data/cecilia/Day 1 Naked NB positive 1-2007-0055_(c1+c2+c3+c4).TIF: [testng] [2024-07-12 02:57:06,901] [pool-1-thread-7] Initializing /data/dan/adultNr1.zvi: [testng] [2024-07-12 02:57:08,207] [pool-1-thread-9] Initializing /data/gaetan/gml16_cenp-fitc_dapi_10.zvi: [testng] [2024-07-12 02:57:13,912] [pool-1-thread-4] Initializing /data/rolf/example_2-c1+c3.jpg: [testng] [2024-07-12 02:57:14,417] [pool-1-thread-2] Initializing /data/eirinn/Pharm3-saline2-0147_11.zvi: [testng] [2024-07-12 02:57:17,810] [pool-1-thread-8] Initializing /data/joseph/E-2009-0001a.zvi: [testng] [2024-07-12 02:57:18,772] [pool-1-thread-4] Initializing /data/lee/u87.cells-0027_AB02_01.zvi: [testng] [2024-07-12 02:57:19,469] [pool-1-thread-11] Initializing /data/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.zvi: [testng] [2024-07-12 02:57:21,601] [pool-1-thread-8] Initializing /data/dan/Zstack_convalaria.zvi: [testng] [2024-07-12 02:57:21,999] [pool-1-thread-3] Initializing /data/markus/Material_color_image_HRc_microscanned_4x3K.zvi: [testng] [2024-07-12 02:57:22,842] [pool-1-thread-10] Initializing /data/michel/e.zvi: [testng] [2024-07-12 02:57:23,609] [pool-1-thread-6] Initializing /data/david/SNAP-181518-0001.zvi: [testng] [2024-07-12 02:57:24,590] [pool-1-thread-1] Initializing /data/gaetan/gml16_cenp-fitc_dapi_18.zvi: [testng] [2024-07-12 02:57:31,554] [pool-1-thread-9] Initializing /data/markus/PC12_neuroblastoma_Fura2_exp#9.zvi: [testng] [2024-07-12 02:57:42,061] [pool-1-thread-12] Initializing /data/dietmar/hMADS-BAC1-BAC7-AF488-RHO-AF647_pre-2006-03-30-six.zvi: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7950, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 10 minutes 52 seconds Finished: SUCCESS