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Started by upstream project "BIOFORMATS-test-repo" build number 119 originally caused by: Started by upstream project "Trigger" build number 136 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins1148014185095980225.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_18516_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:20:34,909 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:34,912 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:20:34,912 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:34,914 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:34,915 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:34,915 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:34,916 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:34,916 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:34,917 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:34,918 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:34,919 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:34,919 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:35,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:35,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:35,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:35,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:35,163 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:35,163 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:35,163 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:35,163 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:35,164 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:20:35,165 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:20:35,165 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 248 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-13 01:20:35,179] [main] java.version = 11.0.16 [testng] 01:20:35,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:35,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:35,255 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-13_01-20-35.log] [testng] 01:20:35,257 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-07-13 01:20:35,260] [main] testng.directory = /data [testng] [2024-07-13 01:20:35,261] [main] testng.configDirectory = /config [testng] [2024-07-13 01:20:35,278] [main] testng.multiplier = 1.0 [testng] [2024-07-13 01:20:35,280] [main] testng.in-memory = false [testng] [2024-07-13 01:20:35,281] [main] testng.allow-missing = false [testng] [2024-07-13 01:20:35,281] [main] user.language = en [testng] [2024-07-13 01:20:35,281] [main] user.country = ${user.country} [testng] [2024-07-13 01:20:35,281] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-13 01:20:49,235] [main] ---------------------------------------- [testng] [2024-07-13 01:20:49,235] [main] Total files: 283 [testng] [2024-07-13 01:20:49,235] [main] Scan time: 13.954 s (49 ms/file) [testng] [2024-07-13 01:20:49,235] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-13 01:29:16,824] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] 01:29:16,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:29:16,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:16,828 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-13_01-29-16.log] [testng] 01:29:16,829 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3059214d - End of configuration. [testng] [2024-07-13 01:29:17,401] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] 01:29:17,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:29:17,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:17,402 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-13_01-29-17.log] [testng] 01:29:17,403 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f7894c9 - End of configuration. [testng] [2024-07-13 01:29:17,501] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] 01:29:17,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:29:17,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:17,502 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-13_01-29-17.log] [testng] 01:29:17,502 |-INFO in ch.qos.logback.core.sift.SiftProcessor@292e84f5 - End of configuration. [testng] [2024-07-13 01:29:17,676] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] 01:29:17,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:29:17,677 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:17,677 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-13_01-29-17.log] [testng] 01:29:17,678 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e2600a4 - End of configuration. [testng] [2024-07-13 01:29:17,748] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:29:17,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:29:17,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:17,748 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-13_01-29-17.log] [testng] 01:29:17,749 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1826f650 - End of configuration. [testng] [2024-07-13 01:29:17,769] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 01:29:17,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:29:17,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:17,770 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-13_01-29-17.log] [testng] 01:29:17,771 |-INFO in ch.qos.logback.core.sift.SiftProcessor@365d2e75 - End of configuration. [testng] [2024-07-13 01:29:17,816] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] 01:29:17,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:29:17,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:17,817 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-13_01-29-17.log] [testng] 01:29:17,817 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65c313a6 - End of configuration. [testng] [2024-07-13 01:29:17,938] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif: [testng] 01:29:17,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:29:17,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:17,938 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-13_01-29-17.log] [testng] 01:29:17,939 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d76d7ce - End of configuration. [testng] [2024-07-13 01:29:18,018] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] 01:29:18,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:29:18,019 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:18,020 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-13_01-29-18.log] [testng] 01:29:18,020 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2796d2d0 - End of configuration. [testng] [2024-07-13 01:29:18,093] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] 01:29:18,093 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:29:18,093 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:18,094 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-13_01-29-18.log] [testng] 01:29:18,094 |-INFO in ch.qos.logback.core.sift.SiftProcessor@112bbf8c - End of configuration. [testng] [2024-07-13 01:29:20,927] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] 01:29:20,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:29:20,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:20,929 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-13_01-29-20.log] [testng] 01:29:20,929 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d0e1bf8 - End of configuration. [testng] [2024-07-13 01:29:21,054] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] 01:29:21,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:29:21,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:29:21,055 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-13_01-29-21.log] [testng] 01:29:21,056 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d826434 - End of configuration. [testng] [2024-07-13 01:29:24,537] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-07-13 01:29:24,670] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-07-13 01:29:24,869] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-07-13 01:29:24,921] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-07-13 01:29:25,579] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-07-13 01:29:25,727] [pool-1-thread-11] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-07-13 01:29:25,851] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-07-13 01:29:25,917] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-07-13 01:29:26,055] [pool-1-thread-3] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-07-13 01:29:26,519] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-07-13 01:29:27,534] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-07-13 01:29:28,026] [pool-1-thread-3] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-07-13 01:29:28,458] [pool-1-thread-12] Initializing /data/qa-17919/f10187.oir: [testng] [2024-07-13 01:29:46,320] [pool-1-thread-6] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-07-13 01:29:46,686] [pool-1-thread-7] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-07-13 01:29:46,837] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-07-13 01:29:46,918] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-07-13 01:29:46,962] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-07-13 01:29:47,021] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-07-13 01:29:48,134] [pool-1-thread-1] Initializing /data/olympus/XYZt.vsi: [testng] [2024-07-13 01:29:48,209] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-07-13 01:29:48,414] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-07-13 01:29:48,425] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-07-13 01:29:48,980] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2024-07-13 01:29:49,049] [pool-1-thread-9] Initializing /data/qa-17270/stack1.oir: [testng] [2024-07-13 01:29:50,471] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-07-13 01:29:50,832] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-07-13 01:29:51,034] [pool-1-thread-7] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-07-13 01:29:55,235] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-07-13 01:29:55,297] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-07-13 01:29:56,262] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-07-13 01:29:56,481] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-07-13 01:29:56,772] [pool-1-thread-10] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-07-13 01:29:56,882] [pool-1-thread-5] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-07-13 01:29:57,067] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-07-13 01:29:57,134] [pool-1-thread-6] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-07-13 01:29:57,364] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-07-13 01:29:57,472] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-07-13 01:29:58,361] [pool-1-thread-8] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-07-13 01:29:58,745] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-07-13 01:29:58,909] [pool-1-thread-5] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-07-13 01:29:59,170] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2024-07-13 01:29:59,299] [pool-1-thread-10] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-07-13 01:30:01,213] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-07-13 01:30:01,277] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2024-07-13 01:30:02,214] [pool-1-thread-8] Initializing /data/olympus/XYZt.oir: [testng] [2024-07-13 01:30:03,803] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2024-07-13 01:30:03,860] [pool-1-thread-2] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-07-13 01:30:04,159] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-07-13 01:30:04,715] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] [2024-07-13 01:30:04,781] [pool-1-thread-2] Initializing 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01:30:06,819] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2024-07-13 01:30:06,948] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-07-13 01:30:07,460] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2024-07-13 01:30:08,938] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-07-13 01:30:09,023] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-07-13 01:30:09,250] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-07-13 01:30:09,479] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2024-07-13 01:30:09,879] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-07-13 01:30:10,103] [pool-1-thread-5] Initializing 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tubulin green 60x.tif: [testng] [2024-07-13 01:30:13,441] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-07-13 01:30:13,948] [pool-1-thread-8] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-07-13 01:30:15,187] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-07-13 01:30:15,279] [pool-1-thread-2] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-07-13 01:30:15,738] [pool-1-thread-6] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2024-07-13 01:30:16,452] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-07-13 01:30:19,944] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-07-13 01:30:20,082] [pool-1-thread-2] Initializing 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[2024-07-13 01:31:37,301] [pool-1-thread-8] Initializing /data/qa-17917/f10010.oir: [testng] [2024-07-13 01:32:02,745] [pool-1-thread-4] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-07-13 01:32:03,438] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-07-13 01:32:03,848] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-07-13 01:32:04,048] [pool-1-thread-5] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-07-13 01:32:04,892] [pool-1-thread-2] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-07-13 01:32:05,259] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-07-13 01:32:05,380] [pool-1-thread-1] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-07-13 01:32:06,936] [pool-1-thread-9] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-07-13 01:32:07,029] [pool-1-thread-3] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-07-13 01:32:07,196] [pool-1-thread-5] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-07-13 01:32:08,150] [pool-1-thread-2] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-07-13 01:32:08,424] [pool-1-thread-3] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-07-13 01:32:08,691] [pool-1-thread-9] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-07-13 01:32:09,138] [pool-1-thread-1] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-07-13 01:32:09,399] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-07-13 01:32:09,907] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-07-13 01:32:10,270] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-07-13 01:32:11,333] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-07-13 01:32:11,374] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-07-13 01:32:11,435] [pool-1-thread-3] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-07-13 01:32:12,471] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-07-13 01:32:12,678] [pool-1-thread-5] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-07-13 01:32:12,778] [pool-1-thread-1] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-07-13 01:32:14,087] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-07-13 01:32:14,553] [pool-1-thread-9] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-07-13 01:32:14,975] [pool-1-thread-10] Initializing /data/qa-17335/1.oir: [testng] [2024-07-13 01:32:15,091] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-07-13 01:32:15,302] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-07-13 01:32:15,948] [pool-1-thread-10] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-07-13 01:32:16,453] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-07-13 01:32:16,749] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-07-13 01:32:17,285] [pool-1-thread-5] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-07-13 01:32:17,352] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-07-13 01:32:17,689] [pool-1-thread-2] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-07-13 01:32:18,300] [pool-1-thread-10] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-07-13 01:32:18,389] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-07-13 01:32:18,886] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-07-13 01:32:18,932] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-07-13 01:32:19,331] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-07-13 01:32:19,702] [pool-1-thread-3] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-07-13 01:32:20,085] [pool-1-thread-9] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-07-13 01:32:20,260] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-07-13 01:32:20,698] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-07-13 01:32:21,700] [pool-1-thread-9] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-07-13 01:32:21,831] [pool-1-thread-2] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-07-13 01:32:22,068] [pool-1-thread-10] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-07-13 01:32:22,356] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-07-13 01:32:23,068] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-07-13 01:32:23,385] [pool-1-thread-9] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-07-13 01:32:23,724] [pool-1-thread-10] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-07-13 01:32:24,044] [pool-1-thread-2] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-07-13 01:32:24,165] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2024-07-13 01:32:24,641] [pool-1-thread-5] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-07-13 01:32:29,477] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-07-13 01:32:29,764] [pool-1-thread-9] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-07-13 01:32:29,996] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-07-13 01:32:30,146] [pool-1-thread-2] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 46 minutes 41 seconds Finished: SUCCESS