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Started by upstream project "BIOFORMATS-test-repo" build number 119 originally caused by: Started by upstream project "Trigger" build number 136 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins7142644650800140398.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_18517_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:20:39,372 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:39,374 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:20:39,374 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:39,376 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:39,376 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:39,377 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:39,377 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:39,377 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:39,378 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:39,379 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:39,379 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:39,379 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:39,589 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:39,589 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:39,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:39,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:39,627 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:39,628 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:39,628 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:39,628 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:39,628 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:20:39,629 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:20:39,629 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 251 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-13 01:20:39,639] [main] java.version = 11.0.16 [testng] 01:20:39,642 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:39,643 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:39,689 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-13_01-20-39.log] [testng] 01:20:39,691 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-07-13 01:20:39,695] [main] testng.directory = /data [testng] [2024-07-13 01:20:39,695] [main] testng.configDirectory = /config [testng] [2024-07-13 01:20:39,705] [main] testng.multiplier = 1.0 [testng] [2024-07-13 01:20:39,706] [main] testng.in-memory = false [testng] [2024-07-13 01:20:39,706] [main] testng.allow-missing = false [testng] [2024-07-13 01:20:39,706] [main] user.language = en [testng] [2024-07-13 01:20:39,706] [main] user.country = ${user.country} [testng] [2024-07-13 01:20:39,707] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-13 01:20:48,030] [main] ---------------------------------------- [testng] [2024-07-13 01:20:48,031] [main] Total files: 4426 [testng] [2024-07-13 01:20:48,032] [main] Scan time: 8.323 s (1 ms/file) [testng] [2024-07-13 01:20:48,032] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-13 01:22:55,848] [pool-1-thread-1] Initializing /data/stephane/Copy of listeria + clathrin1_w3Cy5.tif: [testng] 01:22:55,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:22:55,849 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:55,851 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-13_01-22-55.log] [testng] 01:22:55,851 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cdfc039 - End of configuration. [testng] [2024-07-13 01:22:55,951] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z033.tif: [testng] 01:22:55,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:22:55,951 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:55,952 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-13_01-22-55.log] [testng] 01:22:55,952 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3123e2ae - End of configuration. [testng] [2024-07-13 01:22:55,985] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z006.tif: [testng] 01:22:55,987 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:22:55,987 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:55,987 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-13_01-22-55.log] [testng] 01:22:55,988 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f78e5a7 - End of configuration. [testng] [2024-07-13 01:22:56,029] [pool-1-thread-10] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] 01:22:56,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:22:56,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:56,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-13_01-22-56.log] [testng] 01:22:56,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b3a5d72 - End of configuration. [testng] [2024-07-13 01:22:56,066] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z057.tif: [testng] 01:22:56,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:22:56,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:56,067 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-13_01-22-56.log] [testng] 01:22:56,067 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e26ec88 - End of configuration. [testng] [2024-07-13 01:22:56,093] [pool-1-thread-8] Initializing /data/ascb/bad/CYT-76_PasolliMouse1_4800.tif: [testng] 01:22:56,093 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:22:56,093 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:56,094 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-13_01-22-56.log] [testng] 01:22:56,094 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46dffc2e - End of configuration. [testng] [2024-07-13 01:22:56,183] [pool-1-thread-7] Initializing /data/qa-4833/cjw_tiffs/23273992_Figure 6_NA_NA_22159.TIF: [testng] 01:22:56,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:22:56,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:56,185 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-13_01-22-56.log] [testng] 01:22:56,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71f6cd62 - End of configuration. [testng] [2024-07-13 01:22:56,244] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z007.tif: [testng] 01:22:56,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:22:56,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:56,245 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-13_01-22-56.log] [testng] 01:22:56,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c9cecbf - End of configuration. [testng] [2024-07-13 01:22:56,288] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] 01:22:56,288 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:22:56,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:56,289 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-13_01-22-56.log] [testng] 01:22:56,290 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20a8a517 - End of configuration. [testng] [2024-07-13 01:22:56,364] [pool-1-thread-4] Initializing /data/josiah/cell-Z21.C1.tiff: [testng] 01:22:56,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:22:56,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:56,366 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-13_01-22-56.log] [testng] 01:22:56,366 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b08e373 - End of configuration. [testng] [2024-07-13 01:22:56,414] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] 01:22:56,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:22:56,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:56,415 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-13_01-22-56.log] [testng] 01:22:56,415 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15220106 - End of configuration. [testng] [2024-07-13 01:22:56,466] [pool-1-thread-2] Initializing /data/jerome/e346_plt1(m)_F1-6.tif: [testng] 01:22:56,467 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:22:56,467 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:56,468 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-13_01-22-56.log] [testng] 01:22:56,468 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1678d57 - End of configuration. [testng] [2024-07-13 01:22:59,501] [pool-1-thread-1] Initializing /data/public/condensation/A1.pattern1.tif: [testng] [2024-07-13 01:22:59,547] [pool-1-thread-9] Initializing /data/josiah/cell-Z25.C1.tiff: [testng] [2024-07-13 01:22:59,573] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x32.tiff: [testng] [2024-07-13 01:22:59,591] [pool-1-thread-2] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-07-13 01:22:59,616] [pool-1-thread-4] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-07-13 01:22:59,651] [pool-1-thread-11] Initializing /data/julien/MarjorieCoisy1.TIF: [testng] [2024-07-13 01:22:59,690] [pool-1-thread-10] Initializing /data/lzw/DendriteForks.tif: [testng] [2024-07-13 01:22:59,735] [pool-1-thread-3] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-07-13 01:22:59,759] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z051.tif: [testng] [2024-07-13 01:22:59,782] [pool-1-thread-12] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-07-13 01:22:59,820] [pool-1-thread-7] Initializing /data/stephane/P014.tif: [testng] [2024-07-13 01:23:00,801] [pool-1-thread-6] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-07-13 01:23:00,935] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z052.tif: [testng] [2024-07-13 01:23:01,139] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-07-13 01:23:01,185] [pool-1-thread-9] Initializing /data/marc/ball48_LOCI_RGB_autoscale_10x.tif: [testng] [2024-07-13 01:23:01,245] [pool-1-thread-2] Initializing /data/qa-4745/LIBPB476_Figure 1_H_NA_21879.tiff: [testng] [2024-07-13 01:23:01,310] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-07-13 01:23:01,600] [pool-1-thread-12] Initializing /data/josiah/cell-Z5.C1.tiff: [testng] [2024-07-13 01:23:01,712] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z059.tif: [testng] [2024-07-13 01:23:01,814] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0243.TIF: [testng] [2024-07-13 01:23:01,918] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0223.TIF: [testng] [2024-07-13 01:23:02,130] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z028.tif: [testng] [2024-07-13 01:23:02,251] [pool-1-thread-3] Initializing /data/wayne/mBoeglin_lzw/mm_7.1.2.0.tif: [testng] [2024-07-13 01:23:02,304] [pool-1-thread-1] Initializing /data/jayne/Zst_13/WTERZ2_Series13_z000_ch00.tif: [testng] [2024-07-13 01:23:02,457] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] [2024-07-13 01:23:02,793] [pool-1-thread-11] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-07-13 01:23:02,850] [pool-1-thread-9] Initializing /data/wayne/Rockies-grayscale.tif: [testng] [2024-07-13 01:23:02,912] [pool-1-thread-12] Initializing /data/ascb/FND-25_PaladeGroup_4800.tif: [testng] [2024-07-13 01:23:03,040] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z004.tif: [testng] [2024-07-13 01:23:03,104] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [2024-07-13 01:23:03,442] [pool-1-thread-5] Initializing /data/jae/first image.tif: [testng] [2024-07-13 01:23:03,527] [pool-1-thread-4] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-07-13 01:23:03,693] [pool-1-thread-7] Initializing /data/public/condensation/C4.pattern7.tif: [testng] [2024-07-13 01:23:04,003] [pool-1-thread-11] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-07-13 01:23:04,073] [pool-1-thread-10] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-07-13 01:23:04,150] [pool-1-thread-6] Initializing /data/martin/head.tif: [testng] [2024-07-13 01:23:04,216] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z018.tif: [testng] [2024-07-13 01:23:04,391] [pool-1-thread-2] Initializing 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[testng] [2024-07-13 01:23:55,754] [pool-1-thread-12] Initializing /data/ascb/bad/FND-17_FawcettNucleus_4800.tif: [testng] [2024-07-13 01:23:55,835] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z010.tif: [testng] [2024-07-13 01:23:55,904] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z052.tif: [testng] [2024-07-13 01:23:55,982] [pool-1-thread-5] Initializing /data/bene/3d-example-stack.tif: [testng] [2024-07-13 01:23:56,328] [pool-1-thread-6] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-07-13 01:23:56,529] [pool-1-thread-8] Initializing /data/misc/mri-old.mov: [testng] [2024-07-13 01:23:56,596] [pool-1-thread-3] Initializing /data/wayne/screen-rgb.tiff: [testng] [2024-07-13 01:23:56,783] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-07-13 01:23:56,994] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-07-13 01:23:57,030] [pool-1-thread-5] Initializing 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[testng] [2024-07-13 01:24:57,047] [pool-1-thread-6] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-07-13 01:24:57,272] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs007.TIF: [testng] [2024-07-13 01:24:57,703] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z023.tif: [testng] [2024-07-13 01:24:58,019] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z027.tif: [testng] [2024-07-13 01:24:58,054] [pool-1-thread-6] Initializing /data/samples/melissa/imagej-last-ifd/Rat_Hippocampal_Neuron.tif: [testng] [2024-07-13 01:24:58,408] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-07-13 01:24:58,558] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z030.tif: [testng] [2024-07-13 01:24:58,737] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0216.TIF: [testng] [2024-07-13 01:24:58,849] [pool-1-thread-5] Initializing /data/kevino/_BF_00001.tif: [testng] 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[pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-07-13 01:25:10,698] [pool-1-thread-8] Initializing /data/josiah/cell-Z20.C0.tiff: [testng] [2024-07-13 01:25:10,953] [pool-1-thread-9] Initializing /data/tom-kazimiers/test_exiftool2_resave2.tiff: [testng] [2024-07-13 01:25:11,089] [pool-1-thread-8] Initializing /data/public/condensation/B12.pattern5.tif: [testng] [2024-07-13 01:25:11,274] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x16.tiff: [testng] [2024-07-13 01:25:11,451] [pool-1-thread-1] Initializing /data/josiah/cell-Z26.C1.tiff: [testng] [2024-07-13 01:25:11,520] [pool-1-thread-9] Initializing /data/josiah/cell-Z34.C0.tiff: [testng] [2024-07-13 01:25:11,621] [pool-1-thread-8] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-07-13 01:25:11,928] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z005.tif: [testng] [2024-07-13 01:25:12,062] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-07-13 01:25:12,201] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z035.tif: [testng] [2024-07-13 01:25:12,380] [pool-1-thread-4] Initializing /data/curtis/map/jumps-over: [testng] [2024-07-13 01:25:12,633] [pool-1-thread-9] Initializing /data/damian/03m.tiff: [testng] [2024-07-13 01:25:12,661] [pool-1-thread-4] Initializing /data/josh/ZProjection of stack.tif: [testng] [2024-07-13 01:25:12,722] [pool-1-thread-6] Initializing /data/tamjid/10_para-stage 1.tiff: [testng] [2024-07-13 01:25:12,936] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z057.tif: [testng] [2024-07-13 01:25:13,161] [pool-1-thread-12] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-07-13 01:25:13,210] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-07-13 01:25:13,283] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] 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[pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z012.tif: [testng] [2024-07-13 01:25:16,746] [pool-1-thread-6] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-07-13 01:25:16,996] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-07-13 01:25:17,136] [pool-1-thread-6] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-07-13 01:25:19,152] [pool-1-thread-10] Initializing /data/curtis/images24.tiff: [testng] [2024-07-13 01:25:19,203] [pool-1-thread-1] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-07-13 01:25:19,244] [pool-1-thread-3] Initializing /data/stephane/loci_load_problem.jpg: [testng] [2024-07-13 01:25:19,388] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x32.tiff: [testng] [2024-07-13 01:25:19,530] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0247.TIF: [testng] [2024-07-13 01:25:19,744] [pool-1-thread-11] Initializing /data/josiah/cell-Z28.C0.tiff: [testng] [2024-07-13 01:25:19,795] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z017.tif: [testng] [2024-07-13 01:25:19,834] [pool-1-thread-10] Initializing /data/boguslaw/Arabidopsis.tiff: [testng] [2024-07-13 01:25:20,087] [pool-1-thread-7] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-07-13 01:25:20,335] [pool-1-thread-11] Initializing /data/curtis/map/the-quick: [testng] [2024-07-13 01:25:20,387] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-32.tiff: [testng] [2024-07-13 01:25:20,458] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z037.tif: [testng] [2024-07-13 01:25:20,490] [pool-1-thread-5] Initializing /data/public/libtiff/jim___dg.tif: [testng] [2024-07-13 01:25:20,545] [pool-1-thread-1] Initializing /data/imagesc-82872/SG11410002_253174651388_S001.tif: [testng] [2024-07-13 01:25:20,736] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-07-13 01:25:20,879] [pool-1-thread-10] Initializing /data/ascb/bad/FND-18_FawcettGolgi_4800.tif: [testng] [2024-07-13 01:25:20,947] [pool-1-thread-3] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-07-13 01:25:22,450] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] [2024-07-13 01:25:22,531] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x16.tiff: [testng] [2024-07-13 01:25:22,601] [pool-1-thread-5] Initializing /data/josiah/cell-Z4.C0.tiff: [testng] [2024-07-13 01:25:22,779] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-07-13 01:25:23,107] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z013.tif: [testng] [2024-07-13 01:25:23,227] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z039.tif: [testng] [2024-07-13 01:25:23,378] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] [2024-07-13 01:25:23,512] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-07-13 01:25:23,573] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z062.tif: [testng] [2024-07-13 01:25:23,619] [pool-1-thread-8] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-07-13 01:25:24,182] [pool-1-thread-5] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 32 seconds Finished: SUCCESS