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Started by upstream project "BIOFORMATS-test-repo" build number 124 originally caused by: Started by upstream project "Trigger" build number 141 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins11549863350649748103.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_19337_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:39,922 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:39,924 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 01:21:39,924 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:39,926 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:39,927 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:39,927 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:39,928 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:39,928 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:39,929 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:39,930 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:39,930 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:39,931 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:40,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:40,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:40,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:40,171 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:40,179 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:40,179 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:40,179 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:40,179 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:40,180 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 01:21:40,180 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 01:21:40,181 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 252 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-18 01:21:40,191] [main] java.version = 21 [testng] 01:21:40,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:40,197 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:40,251 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-18_01-21-40.log] [testng] 01:21:40,254 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-07-18 01:21:40,256] [main] testng.directory = /data [testng] [2024-07-18 01:21:40,257] [main] testng.configDirectory = /config [testng] [2024-07-18 01:21:40,272] [main] testng.multiplier = 1.0 [testng] [2024-07-18 01:21:40,273] [main] testng.in-memory = false [testng] [2024-07-18 01:21:40,274] [main] testng.allow-missing = false [testng] [2024-07-18 01:21:40,274] [main] user.language = en [testng] [2024-07-18 01:21:40,274] [main] user.country = ${user.country} [testng] [2024-07-18 01:21:40,274] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-18 01:21:48,828] [main] ---------------------------------------- [testng] [2024-07-18 01:21:48,828] [main] Total files: 4426 [testng] [2024-07-18 01:21:48,829] [main] Scan time: 8.554 s (1 ms/file) [testng] [2024-07-18 01:21:48,829] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-18 01:23:38,424] [pool-1-thread-1] Initializing /data/kevino/_BF_00003.tif: [testng] 01:23:38,424 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:38,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:38,426 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-18_01-23-38.log] [testng] 01:23:38,426 |-INFO in ch.qos.logback.core.sift.SiftProcessor@344d3268 - End of configuration. [testng] [2024-07-18 01:23:38,476] [pool-1-thread-12] Initializing /data/big-images/8kx8k.tif: [testng] 01:23:38,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:38,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:38,477 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-18_01-23-38.log] [testng] 01:23:38,477 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c50ba0 - End of configuration. [testng] [2024-07-18 01:23:38,533] [pool-1-thread-11] Initializing /data/public/libtiff/quad-tile.tif: [testng] 01:23:38,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:38,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:38,534 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-18_01-23-38.log] [testng] 01:23:38,534 |-INFO in ch.qos.logback.core.sift.SiftProcessor@301e1070 - End of configuration. [testng] [2024-07-18 01:23:38,560] [pool-1-thread-10] Initializing /data/ascb/FND-13_PorterFranziniTransverse_4800.tif: [testng] 01:23:38,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:23:38,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:38,561 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-18_01-23-38.log] [testng] 01:23:38,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6eafbe6f - End of configuration. [testng] [2024-07-18 01:23:40,880] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] 01:23:40,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:23:40,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:40,881 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-18_01-23-40.log] [testng] 01:23:40,882 |-INFO in ch.qos.logback.core.sift.SiftProcessor@433fe316 - End of configuration. [testng] [2024-07-18 01:23:40,938] [pool-1-thread-8] Initializing /data/josiah/cell-Z2.C0.tiff: [testng] 01:23:40,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:23:40,939 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:40,940 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-18_01-23-40.log] [testng] 01:23:40,940 |-INFO in ch.qos.logback.core.sift.SiftProcessor@62fd6f1 - End of configuration. [testng] [2024-07-18 01:23:40,990] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z010.tif: [testng] 01:23:40,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:23:40,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:40,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-18_01-23-40.log] [testng] 01:23:40,991 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e6b8c41 - End of configuration. [testng] [2024-07-18 01:23:41,027] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z039.tif: [testng] 01:23:41,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:23:41,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:41,029 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-18_01-23-41.log] [testng] 01:23:41,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17cbe5a2 - End of configuration. [testng] [2024-07-18 01:23:41,071] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] 01:23:41,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:23:41,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:41,072 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-18_01-23-41.log] [testng] 01:23:41,072 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8810b22 - End of configuration. [testng] [2024-07-18 01:23:41,106] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z014.tif: [testng] 01:23:41,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:23:41,106 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:41,108 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-18_01-23-41.log] [testng] 01:23:41,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@110f737 - End of configuration. [testng] [2024-07-18 01:23:41,157] [pool-1-thread-3] Initializing /data/samples/melissa/imagej-4gb/4gb-test&sizeX=1024&sizeY=1024&pixelType=uint16&sizeC=2050.fake: [testng] 01:23:41,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:23:41,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:41,158 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-18_01-23-41.log] [testng] 01:23:41,158 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1411a712 - End of configuration. [testng] [2024-07-18 01:23:41,174] [pool-1-thread-2] Initializing /data/curtis/images24.tiff: [testng] 01:23:41,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:23:41,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:41,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-18_01-23-41.log] [testng] 01:23:41,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74f8cddb - End of configuration. [testng] [2024-07-18 01:23:43,941] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-07-18 01:23:43,965] [pool-1-thread-5] Initializing /data/brian/Alx-488-pk.tif: [testng] [2024-07-18 01:23:43,991] [pool-1-thread-7] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-07-18 01:23:44,037] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs003.TIF: [testng] [2024-07-18 01:23:44,075] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-07-18 01:23:44,105] [pool-1-thread-4] Initializing /data/qa-4833/cjw_tiffs/23273992_Figure 6_NA_NA_22159.TIF: [testng] [2024-07-18 01:23:44,139] [pool-1-thread-8] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] [2024-07-18 01:23:44,172] [pool-1-thread-3] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-07-18 01:23:44,199] [pool-1-thread-1] Initializing /data/josiah/cell-Z0.C0.tiff: [testng] [2024-07-18 01:23:44,347] [pool-1-thread-9] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-07-18 01:23:44,995] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z030.tif: [testng] [2024-07-18 01:23:45,034] [pool-1-thread-6] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-07-18 01:23:45,118] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-32.tiff: [testng] [2024-07-18 01:23:45,170] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-07-18 01:23:45,197] [pool-1-thread-1] Initializing /data/curtis/tubhiswt-5D.tif: [testng] [2024-07-18 01:23:45,249] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-07-18 01:23:45,299] [pool-1-thread-9] Initializing /data/wayne/apple.tif: [testng] [2024-07-18 01:23:45,647] [pool-1-thread-11] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-07-18 01:23:47,712] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-07-18 01:23:47,752] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] [2024-07-18 01:23:47,789] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0222.TIF: [testng] [2024-07-18 01:23:47,979] [pool-1-thread-9] Initializing /data/public/condensation/C4.pattern3.tif: [testng] [2024-07-18 01:23:48,077] [pool-1-thread-2] Initializing /data/public/condensation/A1.pattern1.tif: [testng] [2024-07-18 01:23:48,250] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z060.tif: [testng] [2024-07-18 01:23:48,272] [pool-1-thread-8] Initializing /data/julien/RobertOrti.TIF: [testng] [2024-07-18 01:23:48,326] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-07-18 01:23:48,471] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-07-18 01:23:48,545] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z003.tif: [testng] [2024-07-18 01:23:48,783] [pool-1-thread-6] Initializing /data/christine/Image5D_4color test stack/test stack.tif: [testng] [2024-07-18 01:23:48,841] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-07-18 01:23:48,874] [pool-1-thread-2] Initializing /data/jayne/Zst_76/WTZER_Series76_z000_ch00.tif: [testng] [2024-07-18 01:23:49,008] [pool-1-thread-1] Initializing /data/julien/EmmanuelVignalchewingfraise.TIF: [testng] [2024-07-18 01:23:49,061] [pool-1-thread-9] Initializing /data/ascb/14312-p125A colocalization.tif: [testng] [2024-07-18 01:23:49,364] [pool-1-thread-5] Initializing /data/stephane/F3L1A_DNA 2.tif: [testng] [2024-07-18 01:23:49,639] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z029.tif: [testng] [2024-07-18 01:23:49,663] [pool-1-thread-8] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-07-18 01:23:49,688] [pool-1-thread-3] Initializing /data/wayne/m51-16bit.tif: [testng] [2024-07-18 01:23:50,062] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x64.tiff: [testng] [2024-07-18 01:23:50,170] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z001.tif: [testng] [2024-07-18 01:23:50,206] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z006.tif: [testng] [2024-07-18 01:23:50,233] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-07-18 01:23:50,253] [pool-1-thread-4] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-07-18 01:23:50,386] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z060.tif: [testng] [2024-07-18 01:23:50,533] [pool-1-thread-7] Initializing /data/josiah/cell-Z9.C1.tiff: [testng] [2024-07-18 01:23:50,617] [pool-1-thread-3] Initializing /data/ascb/bad/FND-17_FawcettNucleus_4800.tif: [testng] [2024-07-18 01:23:50,682] [pool-1-thread-1] Initializing 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[pool-1-thread-1] Initializing /data/josh/NESb_C2_TP8.tiff: [testng] [2024-07-18 01:25:30,369] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-07-18 01:25:30,578] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-05.tiff: [testng] [2024-07-18 01:25:30,767] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x48.tiff: [testng] [2024-07-18 01:25:30,846] [pool-1-thread-2] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-07-18 01:25:31,018] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-07-18 01:25:31,138] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-07-18 01:25:32,044] [pool-1-thread-1] Initializing /data/misc/before 1_C2_TP1.tiff: [testng] [2024-07-18 01:25:32,234] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z008.tif: [testng] [2024-07-18 01:25:32,343] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs015.TIF: [testng] [2024-07-18 01:25:32,555] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-01.tiff: [testng] [2024-07-18 01:25:32,629] [pool-1-thread-1] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-07-18 01:25:32,851] [pool-1-thread-2] Initializing /data/josiah/cell-Z26.C1.tiff: [testng] [2024-07-18 01:25:33,110] [pool-1-thread-1] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-07-18 01:25:33,260] [pool-1-thread-2] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-07-18 01:25:33,513] [pool-1-thread-6] Initializing /data/josiah/cell-Z28.C1.tiff: [testng] [2024-07-18 01:25:33,565] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z010.tif: [testng] [2024-07-18 01:25:33,690] [pool-1-thread-2] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-07-18 01:25:33,812] [pool-1-thread-11] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-07-18 01:25:33,864] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z037.tif: [testng] [2024-07-18 01:25:33,900] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] [2024-07-18 01:25:33,975] [pool-1-thread-6] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-07-18 01:25:34,228] [pool-1-thread-3] Initializing /data/ascb/FND-25a_PaladeGroupLabeled_4800.tif: [testng] [2024-07-18 01:25:36,193] [pool-1-thread-2] Initializing /data/ascb/FND-11_PorterPaladeEarly_4800.tif: [testng] [2024-07-18 01:25:36,262] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-07-18 01:25:36,368] [pool-1-thread-1] Initializing /data/public/condensation/A10.pattern5.tif: [testng] [2024-07-18 01:25:36,619] [pool-1-thread-6] Initializing 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[pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z016.tif: [testng] [2024-07-18 01:25:37,515] [pool-1-thread-10] Initializing /data/josh/ZProjection of stack.tif: [testng] [2024-07-18 01:25:37,646] [pool-1-thread-9] Initializing /data/public/condensation/A5.pattern3.tif: [testng] [2024-07-18 01:25:37,821] [pool-1-thread-11] Initializing /data/tamjid/Image_843.tif: [testng] [2024-07-18 01:25:37,905] [pool-1-thread-1] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-07-18 01:25:38,173] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x32.tiff: [testng] [2024-07-18 01:25:38,257] [pool-1-thread-10] Initializing /data/ascb/CYT-90_PasolliMousePanoramic_4800.tif: [testng] [2024-07-18 01:25:38,403] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0235.TIF: [testng] [2024-07-18 01:25:38,471] [pool-1-thread-9] Initializing /data/jerome/e346_plt1(m)_F1-6.tif: [testng] [2024-07-18 01:25:38,630] [pool-1-thread-12] Initializing /data/lzw/Cholinergic.tif: [testng] [2024-07-18 01:25:38,899] [pool-1-thread-1] Initializing /data/imagesc-82872/SG11410002_253174651388_S001.tif: [testng] [2024-07-18 01:25:39,436] [pool-1-thread-9] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-07-18 01:25:39,528] [pool-1-thread-6] Initializing /data/big-images/2kx2k.tif: [testng] [2024-07-18 01:25:39,998] [pool-1-thread-9] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-07-18 01:25:40,051] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-64.tiff: [testng] [2024-07-18 01:25:40,271] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-07-18 01:25:40,736] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x64.tiff: [testng] [2024-07-18 01:25:41,090] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] [2024-07-18 01:25:41,545] [pool-1-thread-8] Initializing /data/curtis/blastocyste.tif: [testng] [2024-07-18 01:25:41,712] [pool-1-thread-12] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-07-18 01:25:42,224] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-07-18 01:25:42,498] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-07-18 01:25:42,595] [pool-1-thread-6] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-07-18 01:25:42,652] [pool-1-thread-12] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-07-18 01:25:42,872] [pool-1-thread-8] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-07-18 01:25:43,085] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z010.tif: [testng] [2024-07-18 01:25:43,162] [pool-1-thread-12] Initializing /data/michael/MFISH.tiff: [testng] [2024-07-18 01:25:43,407] [pool-1-thread-8] Initializing 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[testng] [2024-07-18 01:25:46,674] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-07-18 01:25:46,900] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z038.tif: [testng] [2024-07-18 01:25:46,919] [pool-1-thread-10] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-07-18 01:25:46,943] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z042.tif: [testng] [2024-07-18 01:25:47,014] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0206.TIF: [testng] [2024-07-18 01:25:47,224] [pool-1-thread-12] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] [2024-07-18 01:25:47,272] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z023.tif: [testng] [2024-07-18 01:25:47,495] [pool-1-thread-10] Initializing /data/samples/cielab/Ski_TC8-03_ROMM.tif: [testng] [2024-07-18 01:25:47,706] [pool-1-thread-2] Initializing /data/ascb/FND-22_FawcettLongitudinalMammalian_4800.tif: [testng] [2024-07-18 01:25:48,160] [pool-1-thread-8] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-07-18 01:25:48,648] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z014.tif: [testng] [2024-07-18 01:25:48,913] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-07-18 01:25:48,985] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-07-18 01:25:49,275] [pool-1-thread-5] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-07-18 01:25:49,300] [pool-1-thread-8] Initializing /data/big-images/4kx4k.tif: [testng] [2024-07-18 01:25:49,754] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z044.tif: [testng] [2024-07-18 01:25:50,105] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-07-18 01:25:50,396] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] [2024-07-18 01:25:51,682] [pool-1-thread-12] Initializing /data/alexa/test4.tif: [testng] [2024-07-18 01:25:51,835] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z059.tif: [testng] [2024-07-18 01:25:52,236] [pool-1-thread-12] Initializing /data/ascb/FND-24_GeorgeEPalade.tif: [testng] [2024-07-18 01:25:52,367] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-07-18 01:25:52,860] [pool-1-thread-5] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-07-18 01:25:53,460] [pool-1-thread-5] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-07-18 01:25:53,610] [pool-1-thread-11] Initializing /data/stephane/001_z01.tif: [testng] [2024-07-18 01:25:54,050] [pool-1-thread-2] Initializing /data/public/condensation/C4.pattern7.tif: [testng] [2024-07-18 01:25:54,251] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-07-18 01:25:54,450] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x32.tiff: [testng] [2024-07-18 01:25:54,633] [pool-1-thread-9] Initializing /data/jcb/SuppFig5D.tif: [testng] [2024-07-18 01:25:54,685] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs016.TIF: [testng] [2024-07-18 01:25:54,780] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z034.tif: [testng] [2024-07-18 01:25:55,020] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] [2024-07-18 01:25:55,160] [pool-1-thread-12] Initializing /data/ascb/bad/FND-20_FawcettLongitudinalMidpieces_4800.tif: [testng] [2024-07-18 01:25:55,342] [pool-1-thread-11] Initializing /data/qa-20514/819_2.tif: [testng] [2024-07-18 01:25:55,445] [pool-1-thread-8] Initializing /data/josiah/cell-Z31.C0.tiff: [testng] [2024-07-18 01:25:55,654] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP9.tiff: [testng] [2024-07-18 01:25:55,818] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z013.tif: [testng] [2024-07-18 01:25:56,013] [pool-1-thread-8] Initializing /data/julien/AVECCHRO.TIF: [testng] [2024-07-18 01:25:56,387] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [2024-07-18 01:25:56,529] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z013.tif: [testng] [2024-07-18 01:25:56,606] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z018.tif: [testng] [2024-07-18 01:25:56,734] [pool-1-thread-2] Initializing /data/julien/CRBMquadtour.tif: [testng] [2024-07-18 01:26:00,920] [pool-1-thread-9] Initializing /data/public/libtiff/caspian.tif: [testng] [2024-07-18 01:26:01,042] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x16.tiff: [testng] [2024-07-18 01:26:01,188] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] [2024-07-18 01:26:01,243] [pool-1-thread-4] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-07-18 01:26:01,295] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0240.TIF: [testng] [2024-07-18 01:26:01,480] [pool-1-thread-9] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-07-18 01:26:01,560] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z024.tif: [testng] [2024-07-18 01:26:01,846] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z021.tif: [testng] [2024-07-18 01:26:01,925] [pool-1-thread-9] Initializing /data/jae/first image.tif: [testng] [2024-07-18 01:26:02,067] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0225.TIF: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 18 seconds Finished: SUCCESS