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Started by upstream project "BIOFORMATS-test-repo" build number 133 originally caused by: Started by upstream project "Trigger" build number 153 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins10330548726240207434.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_20813_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:22:52,196 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:22:52,198 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:22:52,198 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:52,199 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:52,199 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:22:52,199 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:22:52,200 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:22:52,200 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:52,200 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:52,201 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:22:52,201 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:22:52,201 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:52,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:52,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:52,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:52,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:52,548 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:52,548 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:52,548 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:52,549 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:52,549 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:22:52,550 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:22:52,550 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 350 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-26 01:22:52,561] [main] java.version = 1.8.0_342 [testng] 01:22:52,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:52,565 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:52,615 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-26_01-22-52.log] [testng] 01:22:52,617 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-26 01:22:52,619] [main] testng.directory = /data [testng] [2024-07-26 01:22:52,619] [main] testng.configDirectory = /config [testng] [2024-07-26 01:22:52,632] [main] testng.multiplier = 1.0 [testng] [2024-07-26 01:22:52,633] [main] testng.in-memory = false [testng] [2024-07-26 01:22:52,633] [main] testng.allow-missing = false [testng] [2024-07-26 01:22:52,633] [main] user.language = en [testng] [2024-07-26 01:22:52,633] [main] user.country = ${user.country} [testng] [2024-07-26 01:22:52,633] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-26 01:23:01,097] [main] ---------------------------------------- [testng] [2024-07-26 01:23:01,097] [main] Total files: 4426 [testng] [2024-07-26 01:23:01,097] [main] Scan time: 8.464 s (1 ms/file) [testng] [2024-07-26 01:23:01,098] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-26 01:25:03,974] [pool-1-thread-1] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] 01:25:03,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:25:03,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:03,976 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-26_01-25-03.log] [testng] 01:25:03,977 |-INFO in ch.qos.logback.core.sift.SiftProcessor@218466eb - End of configuration. [testng] [2024-07-26 01:25:04,040] [pool-1-thread-12] Initializing /data/glen/6307wmmidb4237m_cmle.tif: [testng] 01:25:04,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:25:04,040 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:04,041 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-26_01-25-04.log] [testng] 01:25:04,041 |-INFO in ch.qos.logback.core.sift.SiftProcessor@415d1079 - End of configuration. [testng] [2024-07-26 01:25:04,114] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z016.tif: [testng] 01:25:04,115 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:25:04,115 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:04,116 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-26_01-25-04.log] [testng] 01:25:04,116 |-INFO in ch.qos.logback.core.sift.SiftProcessor@418f9879 - End of configuration. [testng] [2024-07-26 01:25:04,153] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] 01:25:04,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:25:04,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:04,154 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-26_01-25-04.log] [testng] 01:25:04,155 |-INFO in ch.qos.logback.core.sift.SiftProcessor@488cc960 - End of configuration. [testng] [2024-07-26 01:25:04,191] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z018.tif: [testng] 01:25:04,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:25:04,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:04,192 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-26_01-25-04.log] [testng] 01:25:04,192 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f4853d - End of configuration. [testng] [2024-07-26 01:25:04,224] [pool-1-thread-8] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] 01:25:04,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:25:04,225 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:04,225 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-26_01-25-04.log] [testng] 01:25:04,226 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5fd24974 - End of configuration. [testng] [2024-07-26 01:25:04,290] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z057.tif: [testng] 01:25:04,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:25:04,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:04,291 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-26_01-25-04.log] [testng] 01:25:04,292 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6716eb5d - End of configuration. [testng] [2024-07-26 01:25:04,316] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] 01:25:04,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:25:04,316 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:04,317 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-26_01-25-04.log] [testng] 01:25:04,317 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f337c2 - End of configuration. [testng] [2024-07-26 01:25:04,341] [pool-1-thread-5] Initializing /data/josiah/cell-Z31.C1.tiff: [testng] 01:25:04,342 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:25:04,342 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:04,343 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-26_01-25-04.log] [testng] 01:25:04,343 |-INFO in ch.qos.logback.core.sift.SiftProcessor@93d7b0b - End of configuration. [testng] [2024-07-26 01:25:04,375] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z025.tif: [testng] 01:25:04,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:25:04,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:04,377 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-26_01-25-04.log] [testng] 01:25:04,377 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12d089b7 - End of configuration. [testng] [2024-07-26 01:25:04,400] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z006.tif: [testng] 01:25:04,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:25:04,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:04,401 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-26_01-25-04.log] [testng] 01:25:04,401 |-INFO in ch.qos.logback.core.sift.SiftProcessor@594eebf5 - End of configuration. [testng] [2024-07-26 01:25:04,425] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-64.tiff: [testng] 01:25:04,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:25:04,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:25:04,426 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-26_01-25-04.log] [testng] 01:25:04,427 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d8631fa - End of configuration. [testng] [2024-07-26 01:25:06,258] [pool-1-thread-5] Initializing /data/josiah/cell-Z26.C0.tiff: [testng] [2024-07-26 01:25:06,292] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z014.tif: [testng] [2024-07-26 01:25:06,332] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] [2024-07-26 01:25:06,364] [pool-1-thread-8] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-07-26 01:25:06,397] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z048.tif: [testng] [2024-07-26 01:25:06,422] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs007.TIF: [testng] [2024-07-26 01:25:06,480] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-07-26 01:25:06,570] [pool-1-thread-7] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-07-26 01:25:06,641] [pool-1-thread-6] Initializing /data/darwinjob/SESSION4_Image2.tif: [testng] [2024-07-26 01:25:06,719] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x16.tiff: [testng] [2024-07-26 01:25:06,738] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z015.tif: [testng] [2024-07-26 01:25:07,059] [pool-1-thread-1] Initializing /data/paulh/quickpollen4_w4_t1.tif: [testng] [2024-07-26 01:25:07,468] [pool-1-thread-9] Initializing /data/ascb/CYT-31_FriendOsmium_4800.tif: [testng] [2024-07-26 01:25:07,647] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-07-26 01:25:07,694] [pool-1-thread-12] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-07-26 01:25:07,753] [pool-1-thread-8] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-07-26 01:25:07,907] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-05.tiff: [testng] [2024-07-26 01:25:07,926] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0253.TIF: [testng] [2024-07-26 01:25:07,973] [pool-1-thread-11] Initializing /data/ascb/CYT-43_HowellAcinarUnlabeled_4800.tif: [testng] [2024-07-26 01:25:08,090] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] [2024-07-26 01:25:08,585] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-07-26 01:25:08,614] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z030.tif: [testng] [2024-07-26 01:25:08,643] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z010.tif: [testng] [2024-07-26 01:25:08,678] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-07-26 01:25:08,703] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z029.tif: [testng] [2024-07-26 01:25:08,728] [pool-1-thread-6] Initializing /data/josiah/cell-Z39.C1.tiff: [testng] [2024-07-26 01:25:08,824] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0211.TIF: [testng] [2024-07-26 01:25:09,443] [pool-1-thread-10] Initializing /data/public/condensation/C4.pattern.tif: [testng] [2024-07-26 01:25:09,515] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0202.TIF: [testng] [2024-07-26 01:25:09,582] [pool-1-thread-8] Initializing /data/josiah/cell-Z1.C0.tiff: [testng] [2024-07-26 01:25:09,613] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-07-26 01:25:09,642] [pool-1-thread-1] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-07-26 01:25:09,833] [pool-1-thread-2] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-07-26 01:25:09,870] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z018.tif: [testng] [2024-07-26 01:25:09,895] [pool-1-thread-6] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-07-26 01:25:10,849] [pool-1-thread-8] Initializing /data/zstd-compressed/yeast.tif: [testng] [2024-07-26 01:25:10,917] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-07-26 01:25:10,990] [pool-1-thread-7] Initializing /data/josiah/cell-Z33.C0.tiff: [testng] [2024-07-26 01:25:11,040] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-07-26 01:25:11,071] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-32.tiff: [testng] [2024-07-26 01:25:11,091] [pool-1-thread-6] Initializing /data/julien/baldinsug1LMP2col.TIF: [testng] [2024-07-26 01:25:11,142] [pool-1-thread-10] Initializing /data/ascb/CYT-151_Raben_Noncontractile.tif: [testng] [2024-07-26 01:25:11,524] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-07-26 01:25:11,606] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z036.tif: [testng] [2024-07-26 01:25:11,786] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-07-26 01:25:11,836] [pool-1-thread-1] Initializing /data/wayne/screen-rgb.tiff: 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[2024-07-26 01:27:15,637] [pool-1-thread-2] Initializing /data/public/libtiff/oxford.tif: [testng] [2024-07-26 01:27:15,709] [pool-1-thread-3] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-07-26 01:27:15,926] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z023.tif: [testng] [2024-07-26 01:27:15,996] [pool-1-thread-9] Initializing /data/josiah/cell-Z34.C0.tiff: [testng] [2024-07-26 01:27:16,028] [pool-1-thread-6] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-07-26 01:27:16,178] [pool-1-thread-2] Initializing /data/boguslaw/Arabidopsis_large.tif: [testng] [2024-07-26 01:27:16,319] [pool-1-thread-10] Initializing /data/brian/Alx-488-pk.tif: [testng] [2024-07-26 01:27:16,606] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z015.tif: [testng] [2024-07-26 01:27:16,656] [pool-1-thread-5] Initializing /data/josiah/cell-Z23.C0.tiff: [testng] [2024-07-26 01:27:16,696] [pool-1-thread-3] Initializing /data/martin/head.tif: 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[pool-1-thread-8] Initializing /data/josiah/cell-Z38.C1.tiff: [testng] [2024-07-26 01:27:27,881] [pool-1-thread-8] Initializing /data/julien/Genevievevanille.TIF: [testng] [2024-07-26 01:27:27,921] [pool-1-thread-10] Initializing /data/curtis/clown.tif: [testng] [2024-07-26 01:27:27,945] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0243.TIF: [testng] [2024-07-26 01:27:28,050] [pool-1-thread-2] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Green.tif: [testng] [2024-07-26 01:27:28,228] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-07-26 01:27:28,705] [pool-1-thread-10] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-07-26 01:27:28,929] [pool-1-thread-5] Initializing /data/alexa/test4.tif: [testng] [2024-07-26 01:27:28,993] [pool-1-thread-12] Initializing /data/jae/Second image.tif: [testng] [2024-07-26 01:27:29,213] [pool-1-thread-8] Initializing 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[pool-1-thread-10] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-07-26 01:27:32,602] [pool-1-thread-12] Initializing /data/public/condensation/A5.pattern3.tif: [testng] [2024-07-26 01:27:32,835] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] [2024-07-26 01:27:33,446] [pool-1-thread-8] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-07-26 01:27:33,625] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-07-26 01:27:33,855] [pool-1-thread-12] Initializing /data/public/condensation/C4.pattern9.tif: [testng] [2024-07-26 01:27:33,938] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z003.tif: [testng] [2024-07-26 01:27:34,256] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-07-26 01:27:34,559] [pool-1-thread-6] Initializing 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[pool-1-thread-1] Initializing /data/qa-7589/CalGrid.tif: [testng] [2024-07-26 01:27:37,602] [pool-1-thread-9] Initializing /data/damian/27m.tiff: [testng] [2024-07-26 01:27:37,691] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-07-26 01:27:37,761] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z039.tif: [testng] [2024-07-26 01:27:37,824] [pool-1-thread-3] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-07-26 01:27:37,870] [pool-1-thread-1] Initializing /data/sarah/FITC left 100% 1x mag00000.tif: [testng] [2024-07-26 01:27:38,095] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-07-26 01:27:38,289] [pool-1-thread-12] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-07-26 01:27:38,539] [pool-1-thread-9] Initializing /data/ascb/CYT-23_BaintonGlycogenB_4800.tif: [testng] [2024-07-26 01:27:40,125] [pool-1-thread-1] Initializing 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[testng] [2024-07-26 01:27:41,950] [pool-1-thread-2] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-07-26 01:27:42,162] [pool-1-thread-1] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-07-26 01:27:42,330] [pool-1-thread-6] Initializing /data/public/condensation/B12.pattern3.tif: [testng] [2024-07-26 01:27:42,840] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z059.tif: [testng] [2024-07-26 01:27:43,248] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z037.tif: [testng] [2024-07-26 01:27:43,292] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z019.tif: [testng] [2024-07-26 01:27:43,320] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-07-26 01:27:43,713] [pool-1-thread-1] Initializing /data/public/condensation/A5.pattern4.tif: [testng] [2024-07-26 01:27:43,871] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-07-26 01:27:44,383] [pool-1-thread-6] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-07-26 01:27:44,708] [pool-1-thread-1] Initializing /data/ascb/14312-p125A colocalization.tif: [testng] [2024-07-26 01:27:44,786] [pool-1-thread-5] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-07-26 01:27:45,646] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z035.tif: [testng] [2024-07-26 01:27:45,675] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-07-26 01:27:46,108] [pool-1-thread-1] Initializing /data/jayne/Zst_13/WTERZ2_Series13_z000_ch00.tif: [testng] [2024-07-26 01:27:46,288] [pool-1-thread-11] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-07-26 01:27:46,315] [pool-1-thread-6] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-07-26 01:27:46,623] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-07-26 01:27:46,804] [pool-1-thread-6] Initializing /data/pavel/Dmel/spim.pattern: [testng] [2024-07-26 01:27:47,923] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0251.TIF: [testng] [2024-07-26 01:27:48,302] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-07-26 01:27:48,423] [pool-1-thread-12] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-07-26 01:27:49,367] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x32.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 16 seconds Finished: SUCCESS