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Started by upstream project "BIOFORMATS-test-repo" build number 216 originally caused by: Started by upstream project "Trigger" build number 243 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins2019745747758450869.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_34214_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:23:24,227 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:23:24,228 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 01:23:24,228 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:23:24,229 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:23:24,229 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:23:24,230 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:23:24,230 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:23:24,230 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:23:24,231 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:23:24,231 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:23:24,232 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:23:24,232 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:23:24,383 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:23:24,383 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:23:24,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:23:24,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:23:24,414 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:23:24,414 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:23:24,414 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:23:24,415 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:23:24,415 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 01:23:24,415 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 01:23:24,415 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 184 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-10 01:23:24,424] [main] java.version = 21 [testng] 01:23:24,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:23:24,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:24,469 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-10_01-23-24.log] [testng] 01:23:24,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-10-10 01:23:24,471] [main] testng.directory = /data [testng] [2024-10-10 01:23:24,472] [main] testng.configDirectory = /config [testng] [2024-10-10 01:23:24,481] [main] testng.multiplier = 1.0 [testng] [2024-10-10 01:23:24,481] [main] testng.in-memory = false [testng] [2024-10-10 01:23:24,481] [main] testng.allow-missing = false [testng] [2024-10-10 01:23:24,481] [main] user.language = en [testng] [2024-10-10 01:23:24,481] [main] user.country = ${user.country} [testng] [2024-10-10 01:23:24,481] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-10 01:23:55,664] [main] ---------------------------------------- [testng] [2024-10-10 01:23:55,665] [main] Total files: 315 [testng] [2024-10-10 01:23:55,665] [main] Scan time: 31.182 s (98 ms/file) [testng] [2024-10-10 01:23:55,665] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 192 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-10 01:41:38,823] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] 01:41:38,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:41:38,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:38,825 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-10_01-41-38.log] [testng] 01:41:38,826 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d415b38 - End of configuration. [testng] [2024-10-10 01:41:43,268] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] 01:41:43,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:41:43,268 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:43,269 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-10_01-41-43.log] [testng] 01:41:43,269 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7dc8f973 - End of configuration. [testng] [2024-10-10 01:41:44,065] [pool-1-thread-11] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] 01:41:44,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:41:44,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:44,066 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-10_01-41-44.log] [testng] 01:41:44,067 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24d949ca - End of configuration. [testng] [2024-10-10 01:41:46,103] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] 01:41:46,103 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:41:46,103 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:46,104 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-10_01-41-46.log] [testng] 01:41:46,104 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72c3b55d - End of configuration. [testng] [2024-10-10 01:41:48,193] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] 01:41:48,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:41:48,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:48,194 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-10_01-41-48.log] [testng] 01:41:48,195 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e1a7cd3 - End of configuration. [testng] [2024-10-10 01:41:49,044] [pool-1-thread-8] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] 01:41:49,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:41:49,044 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:49,045 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-10_01-41-49.log] [testng] 01:41:49,045 |-INFO in ch.qos.logback.core.sift.SiftProcessor@777458f9 - End of configuration. [testng] [2024-10-10 01:41:50,520] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] 01:41:50,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:41:50,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:50,521 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-10_01-41-50.log] [testng] 01:41:50,521 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64e0b9fe - End of configuration. [testng] [2024-10-10 01:41:51,404] [pool-1-thread-6] Initializing /data/qa-17293/Clipboard.tif: [testng] 01:41:51,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:41:51,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:51,405 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-10_01-41-51.log] [testng] 01:41:51,406 |-INFO in ch.qos.logback.core.sift.SiftProcessor@796879c6 - End of configuration. [testng] [2024-10-10 01:41:53,721] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] 01:41:53,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:41:53,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:53,722 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-10_01-41-53.log] [testng] 01:41:53,723 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1044fb86 - End of configuration. [testng] [2024-10-10 01:41:55,353] [pool-1-thread-4] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] 01:41:55,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:41:55,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:55,354 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-10_01-41-55.log] [testng] 01:41:55,355 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78e5f2c6 - End of configuration. [testng] [2024-10-10 01:41:57,277] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] 01:41:57,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:41:57,277 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:57,278 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-10_01-41-57.log] [testng] 01:41:57,278 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21429387 - End of configuration. [testng] [2024-10-10 01:41:58,418] [pool-1-thread-2] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] 01:41:58,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:41:58,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:58,419 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-10_01-41-58.log] [testng] 01:41:58,419 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68d64550 - End of configuration. [testng] [2024-10-10 01:42:09,514] [pool-1-thread-3] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-10-10 01:42:12,519] [pool-1-thread-5] Initializing /data/qa-17270/alexa488.oir: [testng] [2024-10-10 01:42:13,683] [pool-1-thread-2] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-10-10 01:42:16,337] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2024-10-10 01:42:17,174] [pool-1-thread-9] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-10-10 01:42:18,221] [pool-1-thread-11] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-10-10 01:42:19,174] [pool-1-thread-4] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2024-10-10 01:42:20,320] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2024-10-10 01:42:21,496] [pool-1-thread-10] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2024-10-10 01:42:28,758] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-10-10 01:42:29,816] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-10-10 01:42:34,203] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2024-10-10 01:42:35,559] [pool-1-thread-6] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-10-10 01:42:37,774] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-10-10 01:42:40,140] [pool-1-thread-12] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-10-10 01:42:42,413] [pool-1-thread-9] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2024-10-10 01:42:49,569] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-10-10 01:42:52,214] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2024-10-10 01:42:53,640] [pool-1-thread-10] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-10-10 01:42:56,265] [pool-1-thread-6] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2024-10-10 01:42:59,474] [pool-1-thread-9] Initializing /data/public/gh-4205/zenodo-13680725/matl.omp2info: [testng] [2024-10-10 01:43:09,589] [pool-1-thread-12] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-10-10 01:43:10,736] [pool-1-thread-7] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-10-10 01:43:14,784] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-10-10 01:43:19,155] [pool-1-thread-3] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-10-10 01:43:20,857] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-10-10 01:43:22,924] [pool-1-thread-2] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2024-10-10 01:43:24,203] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-10-10 01:43:26,787] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-10-10 01:43:29,521] [pool-1-thread-4] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-10-10 01:43:30,573] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-10-10 01:43:35,627] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-10-10 01:43:39,091] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2024-10-10 01:43:41,782] [pool-1-thread-12] Initializing /data/olympus/calcium sparks_XYt.oir: [testng] [2024-10-10 01:43:42,934] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-10-10 01:43:43,953] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-10-10 01:43:44,754] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-10-10 01:43:49,632] [pool-1-thread-2] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-10-10 01:43:51,031] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-10-10 01:43:53,219] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-10-10 01:43:57,195] [pool-1-thread-4] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-10-10 01:43:59,322] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-10-10 01:44:00,569] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-10-10 01:44:01,697] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-10-10 01:44:02,529] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2024-10-10 01:44:04,145] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-10-10 01:44:12,822] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-10-10 01:44:14,873] [pool-1-thread-10] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-10-10 01:44:15,669] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-10-10 01:44:17,523] [pool-1-thread-11] Initializing 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[2024-10-10 01:44:48,436] [pool-1-thread-3] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-10-10 01:44:49,603] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-10-10 01:44:50,399] [pool-1-thread-6] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-10-10 01:44:55,267] [pool-1-thread-10] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-10-10 01:44:57,402] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-10-10 01:45:03,149] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-10-10 01:45:06,046] [pool-1-thread-2] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] [2024-10-10 01:45:12,845] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/overview 2 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Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-10-10 01:46:13,160] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-10-10 01:46:14,790] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-10-10 01:46:20,649] [pool-1-thread-2] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-10-10 01:46:21,653] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-10-10 01:46:26,486] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-10-10 01:46:29,700] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2024-10-10 01:46:34,967] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-10-10 01:46:36,817] [pool-1-thread-8] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2024-10-10 01:46:43,723] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-10-10 01:46:48,221] [pool-1-thread-6] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-10-10 01:46:51,527] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-10-10 01:46:56,659] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-10-10 01:47:02,713] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2024-10-10 01:47:11,124] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-10-10 01:47:13,557] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-10-10 01:47:20,419] [pool-1-thread-8] Initializing 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[pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-10-10 01:48:59,911] [pool-1-thread-8] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-10-10 01:49:02,020] [pool-1-thread-2] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-10-10 01:49:56,601] [pool-1-thread-4] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-10-10 01:49:59,670] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-10-10 01:50:02,420] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-10-10 01:50:07,169] [pool-1-thread-8] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-10-10 01:50:10,387] [pool-1-thread-12] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-10-10 01:50:13,416] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2024-10-10 01:50:14,248] [pool-1-thread-3] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-10-10 01:50:16,920] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-10-10 01:50:19,022] [pool-1-thread-8] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-10-10 01:50:20,962] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-10-10 01:50:22,637] [pool-1-thread-4] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-10-10 01:50:26,334] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-10-10 01:50:27,529] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-10-10 01:50:30,499] [pool-1-thread-12] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-10-10 01:50:31,806] [pool-1-thread-4] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-10-10 01:50:35,694] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2024-10-10 01:50:37,256] [pool-1-thread-8] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-10-10 01:50:39,414] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-10-10 01:50:43,311] [pool-1-thread-12] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: [testng] [2024-10-10 01:50:44,308] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-10-10 01:50:45,259] [pool-1-thread-4] Initializing /data/olympus/XYZt.vsi: [testng] [2024-10-10 01:50:46,658] [pool-1-thread-3] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-10-10 01:50:48,655] [pool-1-thread-9] Initializing /data/qa-17917/f10010.oir: [testng] [2024-10-10 01:51:19,214] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-10-10 01:51:21,959] [pool-1-thread-4] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-10-10 01:51:23,208] [pool-1-thread-10] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-10-10 01:51:25,469] [pool-1-thread-12] Initializing /data/olympus/XYZt.oir: [testng] [2024-10-10 01:51:27,858] [pool-1-thread-3] Initializing /data/olympus/Stitched_XYZ.ome.tif: [testng] [2024-10-10 01:51:31,033] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-10-10 01:51:32,405] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-10-10 01:51:34,030] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-10-10 01:51:37,821] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 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01:51:54,857] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-10-10 01:51:57,673] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-10-10 01:52:01,482] [pool-1-thread-10] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-10-10 01:52:03,182] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2024-10-10 01:52:04,761] [pool-1-thread-8] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2024-10-10 01:52:05,994] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2024-10-10 01:52:06,909] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-10-10 01:52:12,450] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] [2024-10-10 01:52:13,841] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-10-10 01:52:15,123] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2024-10-10 01:52:16,717] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2024-10-10 01:52:17,618] [pool-1-thread-12] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-10-10 01:52:23,177] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2024-10-10 01:52:25,800] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-10-10 01:52:27,515] [pool-1-thread-12] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-10-10 01:52:29,866] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-10-10 01:52:31,706] [pool-1-thread-8] Initializing /data/qa-17335/1.oir: [testng] [2024-10-10 01:52:34,447] [pool-1-thread-6] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-10-10 01:52:35,260] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] [2024-10-10 01:52:38,652] [pool-1-thread-12] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-10-10 01:52:40,754] [pool-1-thread-8] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-10-10 01:52:41,989] [pool-1-thread-5] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10176, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 62 minutes 40 seconds Finished: SUCCESS