Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 27
originally caused by:
 Started by upstream project "Trigger" build number 30
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins13384336383976748248.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 1 -le 1 ']'
+ DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR'
+ sudo docker run --rm --name BIOFORMATS-test-folder_3427_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test

test-automated:
   [testng] File leak detector installed
   [testng] 01:21:48,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:21:48,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:21:48,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:21:48,879 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:21:48,887 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:21:48,888 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:21:48,888 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:21:48,888 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:21:48,888 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration.
   [testng] 01:21:48,889 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point
   [testng] 01:21:48,889 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 402 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-04-08 01:21:48,900] [main] java.version = 1.8.0_342
   [testng] 01:21:48,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:21:48,904 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:48,952 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-08_01-21-48.log]
   [testng] 01:21:48,953 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration.
   [testng] [2024-04-08 01:21:48,955] [main] testng.directory = /data
   [testng] [2024-04-08 01:21:48,956] [main] testng.configDirectory = /config
   [testng] [2024-04-08 01:21:48,968] [main] testng.multiplier = 1.0
   [testng] [2024-04-08 01:21:48,969] [main] testng.in-memory = false
   [testng] [2024-04-08 01:21:48,969] [main] testng.allow-missing = false
   [testng] [2024-04-08 01:21:48,969] [main] user.language = fr
   [testng] [2024-04-08 01:21:48,969] [main] user.country = FR
   [testng] [2024-04-08 01:21:48,969] [main] Maximum heap size = 13653 MB
   [testng] Scanning for files...
   [testng] [2024-04-08 01:22:09,771] [main] ----------------------------------------
   [testng] [2024-04-08 01:22:09,771] [main] Total files: 283
   [testng] [2024-04-08 01:22:09,771] [main] Scan time: 20.802 s (73 ms/file)
   [testng] [2024-04-08 01:22:09,771] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 186 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-04-08 01:30:09,219] [pool-1-thread-1] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: 
   [testng] 01:30:09,219 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:30:09,220 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:09,220 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-08_01-30-09.log]
   [testng] 01:30:09,221 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17e4b0ea - End of configuration.
   [testng] [2024-04-08 01:30:09,244] [pool-1-thread-12] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: 
   [testng] 01:30:09,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:30:09,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:09,244 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-08_01-30-09.log]
   [testng] 01:30:09,245 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b509299 - End of configuration.
   [testng] [2024-04-08 01:30:09,377] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: 
   [testng] 01:30:09,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:30:09,377 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:09,379 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-08_01-30-09.log]
   [testng] 01:30:09,379 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e02c98a - End of configuration.
   [testng] [2024-04-08 01:30:09,446] [pool-1-thread-10] Initializing /data/qa-17270/stack1.ome.tif: 
   [testng] 01:30:09,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:30:09,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:09,447 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-08_01-30-09.log]
   [testng] 01:30:09,447 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12d1e0cd - End of configuration.
   [testng] [2024-04-08 01:30:09,571] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: 
   [testng] 01:30:09,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:30:09,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:09,572 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-08_01-30-09.log]
   [testng] 01:30:09,572 |-INFO in ch.qos.logback.core.sift.SiftProcessor@602af67b - End of configuration.
   [testng] [2024-04-08 01:30:09,692] [pool-1-thread-8] Initializing /data/public/etienne/coupe shg stack_0001.oir: 
   [testng] 01:30:09,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:30:09,693 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:09,694 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-08_01-30-09.log]
   [testng] 01:30:09,694 |-INFO in ch.qos.logback.core.sift.SiftProcessor@225f37ce - End of configuration.
   [testng] [2024-04-08 01:30:10,016] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0019.oir: 
   [testng] 01:30:10,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:30:10,016 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:10,017 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-08_01-30-10.log]
   [testng] 01:30:10,017 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a6dbcde - End of configuration.
   [testng] [2024-04-08 01:30:10,295] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.oir: 
   [testng] 01:30:10,295 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:30:10,296 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:10,296 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-08_01-30-10.log]
   [testng] 01:30:10,296 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ba50019 - End of configuration.
   [testng] [2024-04-08 01:30:10,624] [pool-1-thread-5] Initializing /data/olympus/spectral_scan_XYL.oir: 
   [testng] 01:30:10,624 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:30:10,624 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:10,625 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-08_01-30-10.log]
   [testng] 01:30:10,626 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a8af100 - End of configuration.
   [testng] [2024-04-08 01:30:11,625] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: 
   [testng] 01:30:11,625 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:30:11,625 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:11,626 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-08_01-30-11.log]
   [testng] 01:30:11,626 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ebc936e - End of configuration.
   [testng] [2024-04-08 01:30:11,691] [pool-1-thread-3] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: 
   [testng] 01:30:11,691 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:30:11,691 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:11,692 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-08_01-30-11.log]
   [testng] 01:30:11,692 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b1ade65 - End of configuration.
   [testng] [2024-04-08 01:30:11,745] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.oir: 
   [testng] 01:30:11,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:30:11,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:30:11,746 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-08_01-30-11.log]
   [testng] 01:30:11,746 |-INFO in ch.qos.logback.core.sift.SiftProcessor@96a752d - End of configuration.
   [testng] [2024-04-08 01:30:14,467] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/Clipboard.tif: 
   [testng] [2024-04-08 01:30:14,528] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: 
   [testng] [2024-04-08 01:30:14,606] [pool-1-thread-4] Initializing /data/olympus/Clipboard-XYZt.tif: 
   [testng] [2024-04-08 01:30:14,675] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2.ome.tif: 
   [testng] [2024-04-08 01:30:15,136] [pool-1-thread-1] Initializing /data/qa-17270/Clipboard-alexa488.tif: 
   [testng] [2024-04-08 01:30:15,433] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-venus stack.tif: 
   [testng] [2024-04-08 01:30:16,225] [pool-1-thread-11] Initializing /data/qa-17270/image1.oir: 
   [testng] [2024-04-08 01:30:16,460] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: 
   [testng] [2024-04-08 01:30:16,517] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: 
   [testng] [2024-04-08 01:30:16,915] [pool-1-thread-3] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: 
   [testng] [2024-04-08 01:30:18,655] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: 
   [testng] [2024-04-08 01:30:19,623] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: 
   [testng] [2024-04-08 01:30:19,675] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: 
   [testng] [2024-04-08 01:30:19,962] [pool-1-thread-2] Initializing /data/qa-16871/Clipboard.tif: 
   [testng] [2024-04-08 01:30:20,340] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: 
   [testng] [2024-04-08 01:30:20,476] [pool-1-thread-7] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: 
   [testng] [2024-04-08 01:30:20,669] [pool-1-thread-6] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: 
   [testng] [2024-04-08 01:30:20,956] [pool-1-thread-4] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: 
   [testng] [2024-04-08 01:30:21,127] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: 
   [testng] [2024-04-08 01:30:21,649] [pool-1-thread-9] Initializing /data/qa-17270/alexa488.ome.tif: 
   [testng] [2024-04-08 01:30:21,715] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: 
   [testng] [2024-04-08 01:30:25,000] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: 
   [testng] [2024-04-08 01:30:25,194] [pool-1-thread-12] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: 
   [testng] [2024-04-08 01:30:26,284] [pool-1-thread-7] Initializing /data/qa-17335/OSR-Z.oir: 
   [testng] [2024-04-08 01:30:27,084] [pool-1-thread-10] Initializing /data/qa-17270/stack1.oir: 
   [testng] [2024-04-08 01:30:30,404] [pool-1-thread-6] Initializing /data/olympus/40X_4CH_XY.oir: 
   [testng] [2024-04-08 01:30:30,543] [pool-1-thread-11] Initializing /data/olympus/Stitched_XYZ.vsi: 
   [testng] [2024-04-08 01:30:30,621] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: 
   [testng] [2024-04-08 01:30:34,531] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: 
   [testng] [2024-04-08 01:30:34,817] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: 
   [testng] [2024-04-08 01:30:35,084] [pool-1-thread-2] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: 
   [testng] [2024-04-08 01:30:35,472] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: 
   [testng] [2024-04-08 01:30:45,263] [pool-1-thread-5] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: 
   [testng] [2024-04-08 01:30:45,645] [pool-1-thread-9] Initializing /data/qa-21508/Stitch_A01_G008.oir: 
   [testng] [2024-04-08 01:30:46,021] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: 
   [testng] [2024-04-08 01:30:46,102] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: 
   [testng] [2024-04-08 01:30:46,218] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.ome.tif: 
   [testng] [2024-04-08 01:30:46,426] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: 
   [testng] [2024-04-08 01:30:47,690] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: 
   [testng] [2024-04-08 01:30:48,044] [pool-1-thread-12] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: 
   [testng] [2024-04-08 01:30:48,278] [pool-1-thread-7] Initializing /data/olympus/calcium sparks_XYt.ome.tif: 
   [testng] [2024-04-08 01:30:48,469] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: 
   [testng] [2024-04-08 01:30:48,610] [pool-1-thread-5] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: 
   [testng] [2024-04-08 01:30:49,229] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: 
   [testng] [2024-04-08 01:31:00,233] [pool-1-thread-12] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: 
   [testng] [2024-04-08 01:31:01,735] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: 
   [testng] [2024-04-08 01:31:02,079] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2_0019.oir: 
   [testng] [2024-04-08 01:31:03,826] [pool-1-thread-4] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: 
   [testng] [2024-04-08 01:31:06,879] [pool-1-thread-7] Initializing /data/olympus/Stitched_XYZ.ome.tif: 
   [testng] [2024-04-08 01:31:07,039] [pool-1-thread-12] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: 
   [testng] [2024-04-08 01:31:07,658] [pool-1-thread-6] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: 
   [testng] [2024-04-08 01:31:09,790] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: 
   [testng] [2024-04-08 01:31:10,281] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: 
   [testng] [2024-04-08 01:31:11,573] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: 
   [testng] [2024-04-08 01:31:12,605] [pool-1-thread-3] Initializing /data/public/etienne/venus stack.ome.tif: 
   [testng] [2024-04-08 01:31:12,763] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: 
   [testng] [2024-04-08 01:31:16,335] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: 
   [testng] [2024-04-08 01:31:16,865] [pool-1-thread-5] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: 
   [testng] [2024-04-08 01:31:17,364] [pool-1-thread-3] Initializing /data/qa-17331/60x zstack RS.oir: 
   [testng] [2024-04-08 01:31:18,758] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/Clipboard.tif: 
   [testng] [2024-04-08 01:31:19,265] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: 
   [testng] [2024-04-08 01:31:20,131] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: 
   [testng] [2024-04-08 01:31:20,360] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: 
   [testng] [2024-04-08 01:31:23,378] [pool-1-thread-5] Initializing /data/qa-17335/1.ome.tif: 
   [testng] [2024-04-08 01:31:23,804] [pool-1-thread-7] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: 
   [testng] [2024-04-08 01:31:24,075] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: 
   [testng] [2024-04-08 01:31:24,727] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: 
   [testng] [2024-04-08 01:31:25,331] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: 
   [testng] [2024-04-08 01:31:25,505] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: 
   [testng] [2024-04-08 01:31:25,852] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.ome.tif: 
   [testng] [2024-04-08 01:31:25,940] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-stack1.tif: 
   [testng] [2024-04-08 01:31:26,805] [pool-1-thread-4] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: 
   [testng] [2024-04-08 01:34:41,407] [pool-1-thread-3] Initializing /data/qa-17335/Clipboard-1.tif: 
   [testng] [2024-04-08 01:34:42,392] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: 
   [testng] [2024-04-08 01:34:43,474] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: 
   [testng] [2024-04-08 01:34:43,930] [pool-1-thread-9] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: 
   [testng] [2024-04-08 01:34:44,389] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: 
   [testng] [2024-04-08 01:34:45,165] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: 
   [testng] [2024-04-08 01:34:45,211] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: 
   [testng] [2024-04-08 01:34:45,529] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: 
   [testng] [2024-04-08 01:34:45,663] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2_0006.oir: 
   [testng] [2024-04-08 01:34:47,516] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2.oir: 
   [testng] [2024-04-08 01:34:48,732] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/zebra shg.oir: 
   [testng] [2024-04-08 01:35:01,753] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: 
   [testng] [2024-04-08 01:35:03,038] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: 
   [testng] [2024-04-08 01:35:04,343] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: 
   [testng] [2024-04-08 01:35:30,495] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: 
   [testng] [2024-04-08 01:35:34,399] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: 
   [testng] [2024-04-08 01:35:36,080] [pool-1-thread-3] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: 
   [testng] [2024-04-08 01:35:36,747] [pool-1-thread-8] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: 
   [testng] [2024-04-08 01:35:42,269] [pool-1-thread-6] Initializing /data/olympus/XYZt.vsi: 
   [testng] [2024-04-08 01:35:42,982] [pool-1-thread-6] Initializing /data/qa-17409/Stitch_A01_G001.oir: 
   [testng] [2024-04-08 01:35:52,397] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: 
   [testng] [2024-04-08 01:35:52,794] [pool-1-thread-5] Initializing /data/olympus/Stitched_XYZ.oir: 
   [testng] [2024-04-08 01:35:57,989] [pool-1-thread-3] Initializing /data/qa-17270/Clipboard-image1.tif: 
   [testng] [2024-04-08 01:35:59,158] [pool-1-thread-3] Initializing /data/qa-17293/Clipboard.tif: 
   [testng] [2024-04-08 01:36:00,379] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: 
   [testng] [2024-04-08 01:36:01,121] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: 
   [testng] [2024-04-08 01:36:01,519] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: 
   [testng] [2024-04-08 01:36:02,350] [pool-1-thread-12] Initializing /data/qa-17922/example_multipart.oir: 
   [testng] [2024-04-08 01:36:49,608] [pool-1-thread-3] Initializing /data/qa-17335/OSR-Z.ome.tif: 
   [testng] [2024-04-08 01:36:49,667] [pool-1-thread-10] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: 
   [testng] [2024-04-08 01:36:52,900] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: 
   [testng] [2024-04-08 01:36:53,172] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: 
   [testng] [2024-04-08 01:36:54,596] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: 
   [testng] [2024-04-08 01:37:09,681] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: 
   [testng] [2024-04-08 01:37:10,004] [pool-1-thread-5] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: 
   [testng] [2024-04-08 01:37:11,583] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: 
   [testng] [2024-04-08 01:37:12,085] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: 
   [testng] [2024-04-08 01:37:12,188] [pool-1-thread-7] Initializing /data/olympus/calcium sparks.jpg: 
   [testng] [2024-04-08 01:37:12,987] [pool-1-thread-8] Initializing /data/cudmore/20190401__0005.oir: 
   [testng] [2024-04-08 01:37:31,843] [pool-1-thread-10] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: 
   [testng] [2024-04-08 01:38:22,101] [pool-1-thread-9] Initializing /data/qa-17270/image1.ome.tif: 
   [testng] [2024-04-08 01:38:22,147] [pool-1-thread-6] Initializing /data/public/etienne/amy slice z stack_0001.oir: 
   [testng] [2024-04-08 01:38:23,320] [pool-1-thread-7] Initializing /data/qa-17919/f10187.oir: 
   [testng] [2024-04-08 01:39:19,553] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: 
   [testng] [2024-04-08 01:39:19,645] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: 
   [testng] [2024-04-08 01:39:19,740] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: 
   [testng] [2024-04-08 01:39:19,968] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: 
   [testng] [2024-04-08 01:39:20,953] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.vsi: 
   [testng] [2024-04-08 01:39:21,052] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: 
   [testng] [2024-04-08 01:39:21,239] [pool-1-thread-5] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: 
   [testng] [2024-04-08 01:39:21,838] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: 
   [testng] [2024-04-08 01:39:24,404] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: 
   [testng] [2024-04-08 01:39:26,004] [pool-1-thread-11] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: 
   [testng] [2024-04-08 01:39:27,933] [pool-1-thread-3] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: 
   [testng] [2024-04-08 01:39:27,990] [pool-1-thread-5] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: 
   [testng] [2024-04-08 01:39:28,567] [pool-1-thread-3] Initializing /data/olympus/calcium sparks_XYt.oir: 
   [testng] [2024-04-08 01:39:32,945] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: 
   [testng] [2024-04-08 01:39:33,277] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: 
   [testng] [2024-04-08 01:39:33,780] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: 
   [testng] [2024-04-08 01:39:34,853] [pool-1-thread-6] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: 
   [testng] [2024-04-08 01:39:37,253] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: 
   [testng] [2024-04-08 01:39:40,739] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: 
   [testng] [2024-04-08 01:39:40,834] [pool-1-thread-1] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: 
   [testng] [2024-04-08 01:39:42,300] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: 
   [testng] [2024-04-08 01:39:43,220] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: 
   [testng] [2024-04-08 01:39:43,907] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: 
   [testng] [2024-04-08 01:39:45,069] [pool-1-thread-1] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: 
   [testng] [2024-04-08 01:39:45,321] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: 
   [testng] [2024-04-08 01:39:46,257] [pool-1-thread-1] Initializing /data/olympus/XYZt.ome.tif: 
   [testng] [2024-04-08 01:39:49,297] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: 
   [testng] [2024-04-08 01:39:50,167] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0024.oir: 
   [testng] [2024-04-08 01:39:53,515] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: 
   [testng] [2024-04-08 01:39:53,812] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: 
   [testng] [2024-04-08 01:39:55,060] [pool-1-thread-11] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: 
   [testng] [2024-04-08 01:39:55,389] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.ome.tif: 
   [testng] [2024-04-08 01:39:55,927] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: 
   [testng] [2024-04-08 01:39:56,526] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: 
   [testng] [2024-04-08 01:39:57,592] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: 
   [testng] [2024-04-08 01:40:10,102] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: 
   [testng] [2024-04-08 01:40:11,036] [pool-1-thread-1] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: 
   [testng] [2024-04-08 01:40:11,366] [pool-1-thread-11] Initializing /data/olympus/XYZt.oir: 
   [testng] [2024-04-08 01:40:32,801] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: 
   [testng] [2024-04-08 01:40:34,218] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: 
   [testng] [2024-04-08 01:40:34,506] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: 
   [testng] [2024-04-08 01:40:35,054] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: 
   [testng] [2024-04-08 01:40:36,017] [pool-1-thread-5] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: 
   [testng] [2024-04-08 01:40:37,059] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: 
   [testng] [2024-04-08 01:40:38,829] [pool-1-thread-1] Initializing /data/olympus/spectral_scan_XYL.ome.tif: 
   [testng] [2024-04-08 01:40:39,872] [pool-1-thread-5] Initializing /data/qa-17335/stimulation_0001_LSM.oir: 
   [testng] [2024-04-08 01:40:43,196] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: 
   [testng] [2024-04-08 01:40:43,847] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: 
   [testng] [2024-04-08 01:40:44,877] [pool-1-thread-1] Initializing /data/qa-16871/XY_0003.oir: 
   [testng] [2024-04-08 01:40:45,021] [pool-1-thread-3] Initializing /data/qa-16871/XY_0003.ome.tif: 
   [testng] [2024-04-08 01:40:45,121] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: 
   [testng] [2024-04-08 01:40:48,774] [pool-1-thread-2] Initializing /data/qa-17409/Clipboard.tif: 
   [testng] [2024-04-08 01:40:49,607] [pool-1-thread-1] Initializing /data/qa-17917/f10010.oir: 
   [testng] [2024-04-08 01:42:41,154] [pool-1-thread-3] Initializing /data/qa-17335/1.oir: 
   [testng] [2024-04-08 01:42:41,638] [pool-1-thread-2] Initializing /data/qa-17331/Clipboard.tif: 
   [testng] [2024-04-08 01:42:42,206] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: 
   [testng] [2024-04-08 01:42:43,208] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: 
   [testng] [2024-04-08 01:42:43,669] [pool-1-thread-3] Initializing /data/public/etienne/venus stack.oir: 
   [testng] [2024-04-08 01:42:48,447] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: 
   [testng] 02:37:54,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 02:37:54,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 02:37:54,427 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-08_02-37-54.log]
   [testng] 02:37:54,428 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e3fa7a7 - End of configuration.
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 9858, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 76 minutes 11 seconds
Finished: SUCCESS