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Started by upstream project "BIOFORMATS-test-repo" build number 27 originally caused by: Started by upstream project "Trigger" build number 30 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins13698281123721643331.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_3428_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:48,862 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:48,864 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:21:48,864 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:48,865 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:48,865 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:48,865 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:48,865 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:48,865 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:48,866 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:48,866 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:48,866 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:48,866 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:49,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:49,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:49,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:49,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:49,198 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:49,198 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:49,198 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:49,199 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:49,199 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:21:49,200 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:21:49,200 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 334 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-08 01:21:49,213] [main] java.version = 1.8.0_342 [testng] 01:21:49,218 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:49,218 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:49,268 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-08_01-21-49.log] [testng] 01:21:49,269 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-08 01:21:49,272] [main] testng.directory = /data [testng] [2024-04-08 01:21:49,272] [main] testng.configDirectory = /config [testng] [2024-04-08 01:21:49,286] [main] testng.multiplier = 1.0 [testng] [2024-04-08 01:21:49,286] [main] testng.in-memory = false [testng] [2024-04-08 01:21:49,286] [main] testng.allow-missing = false [testng] [2024-04-08 01:21:49,286] [main] user.language = fr [testng] [2024-04-08 01:21:49,286] [main] user.country = FR [testng] [2024-04-08 01:21:49,286] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-08 01:22:04,724] [main] ---------------------------------------- [testng] [2024-04-08 01:22:04,726] [main] Total files: 4424 [testng] [2024-04-08 01:22:04,726] [main] Scan time: 15.438 s (3 ms/file) [testng] [2024-04-08 01:22:04,727] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-08 01:24:18,025] [pool-1-thread-1] Initializing /data/jae/Second image.tif: [testng] 01:24:18,026 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:24:18,026 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,027 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-08_01-24-18.log] [testng] 01:24:18,028 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ff3ae41 - End of configuration. [testng] [2024-04-08 01:24:18,067] [pool-1-thread-12] Initializing /data/sub-resolution/Leica-1/Leica-1-subifds.tiff: [testng] 01:24:18,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:24:18,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,068 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-08_01-24-18.log] [testng] 01:24:18,069 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48ec9a8 - End of configuration. [testng] [2024-04-08 01:24:18,137] [pool-1-thread-11] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] 01:24:18,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:24:18,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,138 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-08_01-24-18.log] [testng] 01:24:18,138 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c3fb43e - End of configuration. [testng] [2024-04-08 01:24:18,176] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] 01:24:18,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:24:18,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,177 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-08_01-24-18.log] [testng] 01:24:18,177 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b0ee039 - End of configuration. [testng] [2024-04-08 01:24:18,208] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] 01:24:18,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:24:18,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,209 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-08_01-24-18.log] [testng] 01:24:18,209 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fc2e18c - End of configuration. [testng] [2024-04-08 01:24:18,239] [pool-1-thread-8] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] 01:24:18,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:24:18,240 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,240 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-08_01-24-18.log] [testng] 01:24:18,241 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ae8f41e - End of configuration. [testng] [2024-04-08 01:24:18,272] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] 01:24:18,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:24:18,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,273 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-08_01-24-18.log] [testng] 01:24:18,273 |-INFO in ch.qos.logback.core.sift.SiftProcessor@696fb9a9 - End of configuration. [testng] [2024-04-08 01:24:18,305] [pool-1-thread-6] Initializing /data/public/condensation/B12.pattern2.tif: [testng] 01:24:18,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:24:18,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-08_01-24-18.log] [testng] 01:24:18,306 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61ba44c7 - End of configuration. [testng] [2024-04-08 01:24:18,375] [pool-1-thread-5] Initializing /data/kevino/_BF_00005.tif: [testng] 01:24:18,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:24:18,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,376 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-08_01-24-18.log] [testng] 01:24:18,377 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4df3a0ac - End of configuration. [testng] [2024-04-08 01:24:18,452] [pool-1-thread-4] Initializing /data/misc/9 h test.tif: [testng] 01:24:18,452 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:24:18,452 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,452 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-08_01-24-18.log] [testng] 01:24:18,453 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a20060 - End of configuration. [testng] [2024-04-08 01:24:18,472] [pool-1-thread-3] Initializing /data/ascb/CYT-149_Fader_Fusion.tif: [testng] 01:24:18,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:24:18,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,473 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-08_01-24-18.log] [testng] 01:24:18,474 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e97f834 - End of configuration. [testng] [2024-04-08 01:24:18,532] [pool-1-thread-2] Initializing /data/public/condensation/C4.pattern9.tif: [testng] 01:24:18,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:24:18,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:18,533 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-08_01-24-18.log] [testng] 01:24:18,534 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3422f9a6 - End of configuration. [testng] [2024-04-08 01:24:20,804] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z014.tif: [testng] [2024-04-08 01:24:20,828] [pool-1-thread-4] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-04-08 01:24:20,854] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-04-08 01:24:20,898] [pool-1-thread-6] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-04-08 01:24:20,925] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-04-08 01:24:20,982] [pool-1-thread-1] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-04-08 01:24:23,397] [pool-1-thread-7] Initializing /data/jay/10-crop-Stack.tif: [testng] [2024-04-08 01:24:23,456] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z052.tif: [testng] [2024-04-08 01:24:23,481] [pool-1-thread-11] Initializing /data/stephane/d01&007.tif: [testng] [2024-04-08 01:24:23,510] [pool-1-thread-10] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-04-08 01:24:24,067] [pool-1-thread-8] Initializing /data/josiah/cell-Z21.C1.tiff: [testng] [2024-04-08 01:24:24,111] [pool-1-thread-11] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-04-08 01:24:24,255] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-04-08 01:24:24,325] [pool-1-thread-4] Initializing /data/public/libtiff/jim___ah.tif: [testng] [2024-04-08 01:24:24,348] [pool-1-thread-6] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-04-08 01:24:24,395] [pool-1-thread-7] Initializing /data/jeff/test36b.tif: [testng] [2024-04-08 01:24:25,180] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-04-08 01:24:25,355] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z063.tif: [testng] [2024-04-08 01:24:25,508] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0226.TIF: [testng] [2024-04-08 01:24:25,581] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-04-08 01:24:25,997] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-04-08 01:24:26,570] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z024.tif: [testng] [2024-04-08 01:24:26,599] [pool-1-thread-4] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-04-08 01:24:26,624] [pool-1-thread-11] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-04-08 01:24:26,663] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-04-08 01:24:26,708] [pool-1-thread-9] Initializing /data/lzw/Cholinergic.tif: [testng] [2024-04-08 01:24:26,751] [pool-1-thread-5] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-04-08 01:24:27,001] [pool-1-thread-10] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-04-08 01:24:27,189] [pool-1-thread-12] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-04-08 01:24:27,373] [pool-1-thread-2] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-04-08 01:24:27,560] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-04-08 01:24:27,585] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-04-08 01:24:27,615] [pool-1-thread-11] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-04-08 01:24:28,011] [pool-1-thread-12] Initializing /data/public/libtiff/jim___cg.tif: [testng] [2024-04-08 01:24:28,032] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x16.tiff: [testng] [2024-04-08 01:24:28,292] [pool-1-thread-8] Initializing /data/qa-4745/LIBPB476_Figure 1_H_NA_21879.tiff: [testng] [2024-04-08 01:24:28,334] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-04-08 01:24:28,531] [pool-1-thread-9] Initializing /data/julien/Bialic_CellulesNinja.tif: [testng] [2024-04-08 01:24:28,565] [pool-1-thread-11] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-04-08 01:24:28,632] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-04-08 01:24:28,710] [pool-1-thread-12] Initializing /data/qa-5004/ID4118_21_uncuff_10x_HE.tif: [testng] [2024-04-08 01:24:29,347] [pool-1-thread-7] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-04-08 01:24:29,533] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0209.TIF: [testng] [2024-04-08 01:24:29,592] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z059.tif: [testng] [2024-04-08 01:24:29,880] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z023.tif: [testng] [2024-04-08 01:24:30,210] [pool-1-thread-4] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-04-08 01:24:30,269] [pool-1-thread-2] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-04-08 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01:26:46,769] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] [2024-04-08 01:26:46,930] [pool-1-thread-3] Initializing /data/damian/36m.tiff: [testng] [2024-04-08 01:26:47,072] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z006.tif: [testng] [2024-04-08 01:26:47,108] [pool-1-thread-7] Initializing /data/chris-lesiak/half-float.tiff: [testng] [2024-04-08 01:26:47,158] [pool-1-thread-10] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-04-08 01:26:47,312] [pool-1-thread-2] Initializing /data/josiah/cell-Z0.C0.tiff: [testng] [2024-04-08 01:26:47,497] [pool-1-thread-3] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-04-08 01:26:47,595] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z000.tif: [testng] [2024-04-08 01:26:47,939] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z022.tif: [testng] [2024-04-08 01:26:48,124] 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[pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z035.tif: [testng] [2024-04-08 01:26:49,215] [pool-1-thread-4] Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-04-08 01:26:49,350] [pool-1-thread-12] Initializing /data/ascb/bad/FND-18_FawcettGolgi_4800.tif: [testng] [2024-04-08 01:26:49,420] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z047.tif: [testng] [2024-04-08 01:26:49,536] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-04-08 01:26:49,736] [pool-1-thread-10] Initializing /data/public/condensation/A5.pattern3.tif: [testng] [2024-04-08 01:26:49,994] [pool-1-thread-3] Initializing /data/public/condensation/C4.pattern2.tif: [testng] [2024-04-08 01:26:50,504] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-04-08 01:26:50,689] [pool-1-thread-10] Initializing /data/glen/742015a20x3middle16bit.tif: [testng] [2024-04-08 01:26:50,787] [pool-1-thread-3] Initializing 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Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] [2024-04-08 01:26:52,913] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z011.tif: [testng] [2024-04-08 01:26:52,968] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-05.tiff: [testng] [2024-04-08 01:26:53,095] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z028.tif: [testng] [2024-04-08 01:26:53,132] [pool-1-thread-10] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-04-08 01:26:53,429] [pool-1-thread-11] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-04-08 01:26:53,481] [pool-1-thread-7] Initializing /data/josh/3Aa_C2_TP1.tiff: [testng] [2024-04-08 01:26:53,708] [pool-1-thread-3] Initializing /data/josiah/cell-Z30.C1.tiff: [testng] [2024-04-08 01:26:53,745] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z035.tif: [testng] [2024-04-08 01:26:53,939] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] [2024-04-08 01:26:54,093] [pool-1-thread-2] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-04-08 01:26:54,301] [pool-1-thread-3] Initializing /data/misc/mri-stack.tif: [testng] [2024-04-08 01:26:54,961] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-04-08 01:26:55,008] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-04-08 01:26:55,205] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-04-08 01:26:55,247] [pool-1-thread-7] Initializing /data/stephane/d02&007.tif: [testng] [2024-04-08 01:26:55,428] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0222.TIF: [testng] [2024-04-08 01:26:55,518] [pool-1-thread-3] Initializing /data/josh/NESb_C2_TP9.tiff: [testng] [2024-04-08 01:26:55,938] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x64.tiff: [testng] [2024-04-08 01:26:55,959] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z000.tif: [testng] [2024-04-08 01:26:56,247] [pool-1-thread-10] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-04-08 01:26:56,422] [pool-1-thread-2] Initializing /data/public/condensation/C4.pattern6.tif: [testng] [2024-04-08 01:26:56,477] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z025.tif: [testng] [2024-04-08 01:26:56,621] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-04-08 01:26:56,814] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-04-08 01:26:56,876] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-04-08 01:26:56,976] [pool-1-thread-7] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-04-08 01:26:57,151] [pool-1-thread-3] Initializing 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/data/brian/retina/retina_C0_Z032.tif: [testng] [2024-04-08 01:26:58,551] [pool-1-thread-8] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-04-08 01:26:59,690] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x16.tiff: [testng] [2024-04-08 01:26:59,775] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-04-08 01:26:59,801] [pool-1-thread-10] Initializing /data/qa-4833/cjw_tiffs/23273992_Figure 6_NA_NA_22159.TIF: [testng] [2024-04-08 01:26:59,940] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs015.TIF: [testng] [2024-04-08 01:27:00,168] [pool-1-thread-3] Initializing /data/tom-kazimiers/crop_two_chan.tiff: [testng] [2024-04-08 01:27:00,195] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-04-08 01:27:00,229] [pool-1-thread-5] Initializing /data/curtis/test1.tiff: [testng] [2024-04-08 01:27:00,368] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0221.TIF: [testng] [2024-04-08 01:27:00,559] [pool-1-thread-5] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina.tif: [testng] [2024-04-08 01:27:00,617] [pool-1-thread-3] Initializing /data/alexa/test4.tif: [testng] [2024-04-08 01:27:00,756] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z014.tif: [testng] [2024-04-08 01:27:00,921] [pool-1-thread-2] Initializing /data/ascb/bad/CYT-76_PasolliMouse1_4800.tif: [testng] [2024-04-08 01:27:01,044] [pool-1-thread-3] Initializing /data/julien/baldinsug1LMP2col.TIF: [testng] [2024-04-08 01:27:01,113] [pool-1-thread-7] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-04-08 01:27:01,357] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0231.TIF: [testng] [2024-04-08 01:27:01,462] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-04-08 01:27:01,576] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-04-08 01:27:01,688] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z004.tif: [testng] [2024-04-08 01:27:01,791] [pool-1-thread-11] Initializing /data/misc/mri.avi: [testng] [2024-04-08 01:27:01,858] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-04-08 01:27:01,982] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z043.tif: [testng] [2024-04-08 01:27:02,021] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-04-08 01:27:02,090] [pool-1-thread-7] Initializing /data/josiah/cell-Z1.C1.tiff: [testng] [2024-04-08 01:27:02,134] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z019.tif: [testng] [2024-04-08 01:27:02,228] [pool-1-thread-1] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-04-08 01:27:02,262] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z056.tif: [testng] [2024-04-08 01:27:02,452] [pool-1-thread-4] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-04-08 01:27:02,522] [pool-1-thread-11] Initializing /data/qa-7589/CalGrid2.tif: [testng] [2024-04-08 01:27:02,677] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z001.tif: [testng] [2024-04-08 01:27:02,716] [pool-1-thread-10] Initializing /data/public/libtiff/jim___dg.tif: [testng] [2024-04-08 01:27:02,907] [pool-1-thread-3] Initializing /data/josiah/cell-Z23.C0.tiff: [testng] [2024-04-08 01:27:03,031] [pool-1-thread-5] Initializing /data/johan/Test1_12.tif: [testng] [2024-04-08 01:27:03,237] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-04-08 01:27:03,292] [pool-1-thread-11] Initializing /data/tamjid/10_para-stage 1.tiff: [testng] [2024-04-08 01:27:03,326] [pool-1-thread-4] Initializing /data/paulh/quickpollen4_w1_t1.tif: [testng] [2024-04-08 01:27:03,375] [pool-1-thread-7] Initializing /data/wayne/Rockies-8bit-indexed.tif: [testng] [2024-04-08 01:27:03,417] [pool-1-thread-1] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-04-08 01:27:03,778] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-04-08 01:27:03,851] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z007.tif: [testng] [2024-04-08 01:27:03,927] [pool-1-thread-11] Initializing /data/caroline/1828_L2_series_1.tif: [testng] [2024-04-08 01:27:03,985] [pool-1-thread-4] Initializing /data/christine/Image5D_4color test stack/RGB from I5D.tif: [testng] [2024-04-08 01:27:04,204] [pool-1-thread-7] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-04-08 01:27:04,292] [pool-1-thread-10] Initializing /data/curtis/test2.tiff: [testng] [2024-04-08 01:27:04,313] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-04-08 01:27:04,549] [pool-1-thread-10] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-04-08 01:27:04,686] [pool-1-thread-3] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] [2024-04-08 01:27:04,746] [pool-1-thread-7] Initializing /data/ascb/FND-28a_PaladeHepatocyteLabeled_4800.tif: [testng] [2024-04-08 01:27:06,721] [pool-1-thread-4] Initializing /data/wayne/m51-16bit.tif: [testng] [2024-04-08 01:27:06,750] [pool-1-thread-6] Initializing /data/ascb/FND-27_PaladeGolgi_4800.tif: [testng] [2024-04-08 01:27:06,810] [pool-1-thread-11] Initializing /data/ascb/FND-26a_PaladeGlycogenLabeled_4800.tif: [testng] [2024-04-08 01:27:09,473] [pool-1-thread-9] Initializing /data/boguslaw/Rab582 3d det gfapBrdUmib1z24Live9-14-2007_11-55-58_AM copy.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 53 seconds Finished: SUCCESS