Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 228
originally caused by:
 Started by upstream project "Trigger" build number 253
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins12712807987376994522.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_35718_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 01:25:59,795 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:25:59,798 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
   [testng] 01:25:59,798 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:25:59,799 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:25:59,799 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:25:59,800 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:25:59,800 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:25:59,801 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:25:59,801 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:25:59,802 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:25:59,803 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:25:59,803 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:26:00,004 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:26:00,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:26:00,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:26:00,032 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:26:00,038 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:26:00,038 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:26:00,038 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:26:00,039 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:26:00,039 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
   [testng] 01:26:00,040 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
   [testng] 01:26:00,040 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 239 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-10-19 01:26:00,050] [main] java.version = 11.0.16
   [testng] 01:26:00,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:26:00,054 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:26:00,101 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-19_01-26-00.log]
   [testng] 01:26:00,103 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
   [testng] [2024-10-19 01:26:00,105] [main] testng.directory = /data
   [testng] [2024-10-19 01:26:00,105] [main] testng.configDirectory = /config
   [testng] [2024-10-19 01:26:00,116] [main] testng.multiplier = 1.0
   [testng] [2024-10-19 01:26:00,119] [main] testng.in-memory = false
   [testng] [2024-10-19 01:26:00,119] [main] testng.allow-missing = false
   [testng] [2024-10-19 01:26:00,119] [main] user.language = en
   [testng] [2024-10-19 01:26:00,119] [main] user.country = ${user.country}
   [testng] [2024-10-19 01:26:00,119] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-10-19 01:26:22,386] [main] ----------------------------------------
   [testng] [2024-10-19 01:26:22,386] [main] Total files: 315
   [testng] [2024-10-19 01:26:22,386] [main] Scan time: 22.267 s (70 ms/file)
   [testng] [2024-10-19 01:26:22,386] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 192 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-10-19 01:36:58,223] [pool-1-thread-1] Initializing /data/olympus/calcium sparks_XYt.oir: 
   [testng] 01:36:58,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:36:58,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:58,227 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-19_01-36-58.log]
   [testng] 01:36:58,227 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e394327 - End of configuration.
   [testng] [2024-10-19 01:36:58,857] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: 
   [testng] 01:36:58,858 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:36:58,858 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:58,858 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-19_01-36-58.log]
   [testng] 01:36:58,859 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e084cb - End of configuration.
   [testng] [2024-10-19 01:36:59,046] [pool-1-thread-11] Initializing /data/qa-21508/Stitch_A01_G008.oir: 
   [testng] 01:36:59,046 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:36:59,046 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:59,047 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-19_01-36-59.log]
   [testng] 01:36:59,048 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a524b4a - End of configuration.
   [testng] [2024-10-19 01:36:59,174] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: 
   [testng] 01:36:59,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:36:59,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:59,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-19_01-36-59.log]
   [testng] 01:36:59,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e97a6ec - End of configuration.
   [testng] [2024-10-19 01:36:59,314] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: 
   [testng] 01:36:59,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:36:59,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:59,315 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-19_01-36-59.log]
   [testng] 01:36:59,315 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f1e1d04 - End of configuration.
   [testng] [2024-10-19 01:36:59,381] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.ome.tif: 
   [testng] 01:36:59,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:36:59,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:59,381 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-19_01-36-59.log]
   [testng] 01:36:59,382 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7755d7b5 - End of configuration.
   [testng] [2024-10-19 01:36:59,588] [pool-1-thread-7] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: 
   [testng] 01:36:59,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:36:59,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:59,589 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-19_01-36-59.log]
   [testng] 01:36:59,590 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60d9f6d0 - End of configuration.
   [testng] [2024-10-19 01:36:59,773] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: 
   [testng] 01:36:59,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:36:59,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:36:59,774 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-19_01-36-59.log]
   [testng] 01:36:59,774 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52dea89e - End of configuration.
   [testng] [2024-10-19 01:37:00,022] [pool-1-thread-5] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: 
   [testng] 01:37:00,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:37:00,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:00,023 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-19_01-37-00.log]
   [testng] 01:37:00,023 |-INFO in ch.qos.logback.core.sift.SiftProcessor@689a6c9e - End of configuration.
   [testng] [2024-10-19 01:37:00,236] [pool-1-thread-4] Initializing /data/qa-16871/XY_0003.ome.tif: 
   [testng] 01:37:00,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:37:00,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:00,237 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-19_01-37-00.log]
   [testng] 01:37:00,238 |-INFO in ch.qos.logback.core.sift.SiftProcessor@437a0520 - End of configuration.
   [testng] [2024-10-19 01:37:00,575] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: 
   [testng] 01:37:00,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:37:00,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:00,575 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-19_01-37-00.log]
   [testng] 01:37:00,576 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3895890b - End of configuration.
   [testng] [2024-10-19 01:37:00,762] [pool-1-thread-2] Initializing /data/qa-17270/image1.oir: 
   [testng] 01:37:00,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:37:00,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:37:00,762 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-19_01-37-00.log]
   [testng] 01:37:00,763 |-INFO in ch.qos.logback.core.sift.SiftProcessor@575729e - End of configuration.
   [testng] [2024-10-19 01:37:04,319] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: 
   [testng] [2024-10-19 01:37:05,076] [pool-1-thread-4] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: 
   [testng] [2024-10-19 01:37:05,353] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: 
   [testng] [2024-10-19 01:37:07,626] [pool-1-thread-10] Initializing /data/olympus/40X_4CH_XY.oir: 
   [testng] [2024-10-19 01:37:07,851] [pool-1-thread-8] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: 
   [testng] [2024-10-19 01:37:08,339] [pool-1-thread-6] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: 
   [testng] [2024-10-19 01:37:08,868] [pool-1-thread-3] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: 
   [testng] [2024-10-19 01:37:10,159] [pool-1-thread-7] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: 
   [testng] [2024-10-19 01:37:11,058] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: 
   [testng] [2024-10-19 01:37:11,796] [pool-1-thread-7] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: 
   [testng] [2024-10-19 01:37:15,495] [pool-1-thread-9] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: 
   [testng] [2024-10-19 01:37:17,664] [pool-1-thread-8] Initializing /data/public/etienne/coupe shg stack_0001.oir: 
   [testng] [2024-10-19 01:37:18,180] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: 
   [testng] [2024-10-19 01:37:18,777] [pool-1-thread-4] Initializing /data/qa-17409/Clipboard.tif: 
   [testng] [2024-10-19 01:37:19,508] [pool-1-thread-3] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir: 
   [testng] [2024-10-19 01:37:20,088] [pool-1-thread-1] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: 
   [testng] [2024-10-19 01:37:22,512] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: 
   [testng] [2024-10-19 01:37:23,897] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: 
   [testng] [2024-10-19 01:37:25,029] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: 
   [testng] [2024-10-19 01:37:25,527] [pool-1-thread-8] Initializing /data/qa-17293/Clipboard.tif: 
   [testng] [2024-10-19 01:37:26,842] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/Clipboard.tif: 
   [testng] [2024-10-19 01:37:27,899] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: 
   [testng] [2024-10-19 01:37:28,947] [pool-1-thread-9] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: 
   [testng] [2024-10-19 01:37:31,134] [pool-1-thread-8] Initializing /data/olympus/XYZt.oir: 
   [testng] [2024-10-19 01:37:32,777] [pool-1-thread-4] Initializing /data/olympus/XYZt.ome.tif: 
   [testng] [2024-10-19 01:37:33,818] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: 
   [testng] [2024-10-19 01:37:34,647] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: 
   [testng] [2024-10-19 01:37:36,739] [pool-1-thread-11] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: 
   [testng] [2024-10-19 01:37:37,151] [pool-1-thread-5] Initializing /data/qa-16871/Clipboard.tif: 
   [testng] [2024-10-19 01:37:38,384] [pool-1-thread-3] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: 
   [testng] [2024-10-19 01:37:38,801] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: 
   [testng] [2024-10-19 01:37:41,572] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: 
   [testng] [2024-10-19 01:37:41,919] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2.oir: 
   [testng] [2024-10-19 01:37:43,365] [pool-1-thread-11] Initializing /data/olympus/Stitched_XYZ.ome.tif: 
   [testng] [2024-10-19 01:37:43,830] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: 
   [testng] [2024-10-19 01:37:44,302] [pool-1-thread-8] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: 
   [testng] [2024-10-19 01:37:46,339] [pool-1-thread-5] Initializing /data/olympus/XYZt.vsi: 
   [testng] [2024-10-19 01:37:46,601] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: 
   [testng] [2024-10-19 01:37:47,046] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: 
   [testng] [2024-10-19 01:37:48,441] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: 
   [testng] [2024-10-19 01:37:49,123] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: 
   [testng] [2024-10-19 01:37:50,181] [pool-1-thread-11] Initializing /data/qa-17922/example_multipart.oir: 
   [testng] [2024-10-19 01:38:11,738] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: 
   [testng] [2024-10-19 01:38:12,460] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: 
   [testng] [2024-10-19 01:38:13,115] [pool-1-thread-3] Initializing /data/qa-17917/f10010.oir: 
   [testng] [2024-10-19 01:38:41,713] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: 
   [testng] [2024-10-19 01:38:43,410] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: 
   [testng] [2024-10-19 01:38:47,876] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: 
   [testng] [2024-10-19 01:38:49,331] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: 
   [testng] [2024-10-19 01:38:50,198] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: 
   [testng] [2024-10-19 01:38:52,561] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/zebra shg.oir: 
   [testng] [2024-10-19 01:38:54,355] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: 
   [testng] [2024-10-19 01:38:55,079] [pool-1-thread-1] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: 
   [testng] [2024-10-19 01:38:56,369] [pool-1-thread-5] Initializing /data/qa-17335/OSR-Z.oir: 
   [testng] [2024-10-19 01:38:56,845] [pool-1-thread-10] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir: 
   [testng] [2024-10-19 01:38:59,201] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: 
   [testng] [2024-10-19 01:39:00,291] [pool-1-thread-9] Initializing /data/olympus/spectral_scan_XYL.oir: 
   [testng] [2024-10-19 01:39:02,446] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: 
   [testng] [2024-10-19 01:39:04,943] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729_0019.oir: 
   [testng] [2024-10-19 01:39:05,588] [pool-1-thread-5] Initializing /data/olympus/Clipboard-XYZt.tif: 
   [testng] [2024-10-19 01:39:10,388] [pool-1-thread-4] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: 
   [testng] [2024-10-19 01:39:11,008] [pool-1-thread-8] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: 
   [testng] [2024-10-19 01:39:15,455] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: 
   [testng] [2024-10-19 01:39:16,469] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-image1.tif: 
   [testng] [2024-10-19 01:39:19,467] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: 
   [testng] [2024-10-19 01:39:21,238] [pool-1-thread-8] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: 
   [testng] [2024-10-19 01:39:21,786] [pool-1-thread-4] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: 
   [testng] [2024-10-19 01:39:22,274] [pool-1-thread-9] Initializing /data/qa-17270/Clipboard-alexa488.tif: 
   [testng] [2024-10-19 01:39:25,303] [pool-1-thread-5] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: 
   [testng] [2024-10-19 01:39:27,280] [pool-1-thread-6] Initializing /data/qa-17270/stack1.ome.tif: 
   [testng] [2024-10-19 01:39:30,575] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: 
   [testng] [2024-10-19 01:39:33,040] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2.ome.tif: 
   [testng] [2024-10-19 01:39:33,788] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: 
   [testng] [2024-10-19 01:39:35,175] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: 
   [testng] [2024-10-19 01:39:36,007] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: 
   [testng] [2024-10-19 01:39:36,847] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0024.oir: 
   [testng] [2024-10-19 01:39:39,744] [pool-1-thread-9] Initializing /data/qa-17335/1.ome.tif: 
   [testng] [2024-10-19 01:39:40,418] [pool-1-thread-10] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: 
   [testng] [2024-10-19 01:39:41,059] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: 
   [testng] [2024-10-19 01:39:42,108] [pool-1-thread-8] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: 
   [testng] [2024-10-19 01:39:42,789] [pool-1-thread-6] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: 
   [testng] [2024-10-19 01:39:44,910] [pool-1-thread-5] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir: 
   [testng] [2024-10-19 01:39:46,986] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: 
   [testng] [2024-10-19 01:39:49,242] [pool-1-thread-8] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: 
   [testng] [2024-10-19 01:39:49,986] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: 
   [testng] [2024-10-19 01:39:53,258] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: 
   [testng] [2024-10-19 01:39:55,022] [pool-1-thread-10] Initializing /data/qa-17270/Clipboard-stack1.tif: 
   [testng] [2024-10-19 01:39:57,000] [pool-1-thread-8] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: 
   [testng] [2024-10-19 01:40:01,422] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.vsi: 
   [testng] [2024-10-19 01:40:02,363] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: 
   [testng] [2024-10-19 01:40:03,426] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: 
   [testng] [2024-10-19 01:40:07,754] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: 
   [testng] [2024-10-19 01:40:08,453] [pool-1-thread-5] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: 
   [testng] [2024-10-19 01:41:01,916] [pool-1-thread-9] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir: 
   [testng] [2024-10-19 01:41:02,799] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: 
   [testng] [2024-10-19 01:41:03,736] [pool-1-thread-8] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: 
   [testng] [2024-10-19 01:41:04,953] [pool-1-thread-6] Initializing /data/olympus/Stitched_XYZ.oir: 
   [testng] [2024-10-19 01:41:07,534] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: 
   [testng] [2024-10-19 01:41:10,531] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.oir: 
   [testng] [2024-10-19 01:41:11,116] [pool-1-thread-8] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: 
   [testng] [2024-10-19 01:41:11,799] [pool-1-thread-6] Initializing /data/qa-16881/P10D1 20150729.ome.tif: 
   [testng] [2024-10-19 01:41:13,811] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: 
   [testng] [2024-10-19 01:41:17,562] [pool-1-thread-6] Initializing /data/qa-17331/Clipboard.tif: 
   [testng] [2024-10-19 01:41:18,807] [pool-1-thread-10] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: 
   [testng] [2024-10-19 01:41:22,578] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: 
   [testng] [2024-10-19 01:41:23,065] [pool-1-thread-4] Initializing /data/public/etienne/amy slice z stack_0001.oir: 
   [testng] [2024-10-19 01:41:23,524] [pool-1-thread-8] Initializing /data/qa-17270/image1.ome.tif: 
   [testng] [2024-10-19 01:41:26,849] [pool-1-thread-1] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir: 
   [testng] [2024-10-19 01:41:27,485] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: 
   [testng] [2024-10-19 01:41:28,709] [pool-1-thread-9] Initializing /data/qa-17335/OSR-Z.ome.tif: 
   [testng] [2024-10-19 01:41:30,182] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.vsi: 
   [testng] [2024-10-19 01:41:30,827] [pool-1-thread-8] Initializing /data/olympus/spectral_scan_XYL.ome.tif: 
   [testng] [2024-10-19 01:41:33,638] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: 
   [testng] [2024-10-19 01:41:34,155] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif: 
   [testng] [2024-10-19 01:41:35,479] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: 
   [testng] [2024-10-19 01:41:37,151] [pool-1-thread-8] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: 
   [testng] [2024-10-19 01:41:39,648] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: 
   [testng] [2024-10-19 01:41:40,066] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0006.oir: 
   [testng] [2024-10-19 01:41:40,430] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.oir: 
   [testng] [2024-10-19 01:41:40,812] [pool-1-thread-4] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: 
   [testng] [2024-10-19 01:41:41,420] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: 
   [testng] [2024-10-19 01:41:47,006] [pool-1-thread-6] Initializing /data/public/etienne/venus stack.oir: 
   [testng] [2024-10-19 01:41:47,679] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: 
   [testng] [2024-10-19 01:41:48,309] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: 
   [testng] [2024-10-19 01:41:48,777] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: 
   [testng] [2024-10-19 01:41:49,356] [pool-1-thread-9] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: 
   [testng] [2024-10-19 01:41:53,408] [pool-1-thread-1] Initializing /data/olympus/40X_4CH_XY.ome.tif: 
   [testng] [2024-10-19 01:41:53,830] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: 
   [testng] [2024-10-19 01:41:54,167] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: 
   [testng] [2024-10-19 01:41:54,942] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: 
   [testng] [2024-10-19 01:41:58,672] [pool-1-thread-9] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: 
   [testng] [2024-10-19 01:41:59,913] [pool-1-thread-8] Initializing /data/olympus/calcium sparks.jpg: 
   [testng] [2024-10-19 01:42:00,071] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: 
   [testng] [2024-10-19 01:42:01,714] [pool-1-thread-1] Initializing /data/qa-17409/Stitch_A01_G001.oir: 
   [testng] [2024-10-19 01:42:02,413] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: 
   [testng] [2024-10-19 01:42:05,097] [pool-1-thread-4] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: 
   [testng] [2024-10-19 01:42:05,498] [pool-1-thread-8] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: 
   [testng] [2024-10-19 01:42:09,208] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: 
   [testng] [2024-10-19 01:42:10,259] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: 
   [testng] [2024-10-19 01:42:11,907] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: 
   [testng] [2024-10-19 01:42:13,575] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.ome.tif: 
   [testng] [2024-10-19 01:42:15,097] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: 
   [testng] [2024-10-19 01:42:17,853] [pool-1-thread-1] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: 
   [testng] [2024-10-19 01:42:22,923] [pool-1-thread-4] Initializing /data/qa-17331/60x zstack RS.ome.tif: 
   [testng] [2024-10-19 01:42:23,499] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: 
   [testng] [2024-10-19 01:42:24,106] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: 
   [testng] [2024-10-19 01:42:29,935] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: 
   [testng] [2024-10-19 01:42:30,511] [pool-1-thread-7] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: 
   [testng] [2024-10-19 01:42:34,570] [pool-1-thread-8] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: 
   [testng] [2024-10-19 01:42:35,391] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: 
   [testng] [2024-10-19 01:42:36,191] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: 
   [testng] [2024-10-19 01:42:37,872] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: 
   [testng] [2024-10-19 01:42:41,521] [pool-1-thread-4] Initializing /data/olympus/2017-04-20/Clipboard.tif: 
   [testng] [2024-10-19 01:42:43,483] [pool-1-thread-9] Initializing /data/qa-17270/alexa488.oir: 
   [testng] [2024-10-19 01:42:45,900] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: 
   [testng] [2024-10-19 01:42:47,363] [pool-1-thread-6] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: 
   [testng] [2024-10-19 01:42:48,221] [pool-1-thread-8] Initializing /data/public/gh-4205/zenodo-13680725/matl.omp2info: 
   [testng] [2024-10-19 01:42:57,030] [pool-1-thread-3] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: 
   [testng] [2024-10-19 01:43:00,114] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: 
   [testng] [2024-10-19 01:43:04,470] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: 
   [testng] [2024-10-19 01:43:05,102] [pool-1-thread-11] Initializing /data/public/etienne/Clipboard-venus stack.tif: 
   [testng] [2024-10-19 01:43:06,369] [pool-1-thread-2] Initializing /data/qa-17270/stack1.oir: 
   [testng] [2024-10-19 01:43:10,191] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: 
   [testng] [2024-10-19 01:43:10,623] [pool-1-thread-4] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: 
   [testng] [2024-10-19 01:43:14,100] [pool-1-thread-6] Initializing /data/qa-16881/P10-50 D2_0019.oir: 
   [testng] [2024-10-19 01:43:14,781] [pool-1-thread-11] Initializing /data/qa-17335/Clipboard-1.tif: 
   [testng] [2024-10-19 01:43:16,343] [pool-1-thread-4] Initializing /data/cudmore/20190401__0005.oir: 
   [testng] [2024-10-19 01:43:23,134] [pool-1-thread-3] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: 
   [testng] [2024-10-19 01:43:27,209] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: 
   [testng] [2024-10-19 01:43:28,197] [pool-1-thread-11] Initializing /data/qa-16871/XY_0003.oir: 
   [testng] [2024-10-19 01:43:30,252] [pool-1-thread-2] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: 
   [testng] [2024-10-19 01:43:31,046] [pool-1-thread-7] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: 
   [testng] [2024-10-19 01:43:31,812] [pool-1-thread-3] Initializing /data/qa-17335/1.oir: 
   [testng] [2024-10-19 01:43:33,295] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: 
   [testng] [2024-10-19 01:43:36,216] [pool-1-thread-11] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: 
   [testng] [2024-10-19 01:43:36,828] [pool-1-thread-3] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: 
   [testng] [2024-10-19 01:43:37,350] [pool-1-thread-2] Initializing /data/qa-17919/f10187.oir: 
   [testng] [2024-10-19 01:43:56,027] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: 
   [testng] [2024-10-19 01:43:58,258] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: 
   [testng] [2024-10-19 01:43:59,117] [pool-1-thread-9] Initializing /data/qa-17335/stimulation_0001_LSM.oir: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 10176, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 51 minutes 28 seconds
Finished: SUCCESS