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Started by upstream project "BIOFORMATS-test-repo" build number 228 originally caused by: Started by upstream project "Trigger" build number 253 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins14822211274919866138.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_35719_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:26:01,625 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:26:01,627 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 01:26:01,627 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:26:01,628 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:26:01,628 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:26:01,629 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:26:01,629 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:26:01,629 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:26:01,630 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:26:01,630 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:26:01,630 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:26:01,631 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:26:01,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:26:01,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:26:01,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:26:01,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:26:01,839 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:26:01,839 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:26:01,839 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:26:01,839 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:26:01,839 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 01:26:01,840 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 01:26:01,840 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 210 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-19 01:26:01,850] [main] java.version = 11.0.16 [testng] 01:26:01,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:26:01,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:26:01,902 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-19_01-26-01.log] [testng] 01:26:01,904 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-19 01:26:01,906] [main] testng.directory = /data [testng] [2024-10-19 01:26:01,906] [main] testng.configDirectory = /config [testng] [2024-10-19 01:26:01,917] [main] testng.multiplier = 1.0 [testng] [2024-10-19 01:26:01,919] [main] testng.in-memory = false [testng] [2024-10-19 01:26:01,919] [main] testng.allow-missing = false [testng] [2024-10-19 01:26:01,919] [main] user.language = en [testng] [2024-10-19 01:26:01,919] [main] user.country = ${user.country} [testng] [2024-10-19 01:26:01,919] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-19 01:26:47,003] [main] ---------------------------------------- [testng] [2024-10-19 01:26:47,004] [main] Total files: 4426 [testng] [2024-10-19 01:26:47,004] [main] Scan time: 45.084 s (10 ms/file) [testng] [2024-10-19 01:26:47,004] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-19 01:38:09,305] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] 01:38:09,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:38:09,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:09,307 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-19_01-38-09.log] [testng] 01:38:09,308 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7561f2c0 - End of configuration. [testng] [2024-10-19 01:38:09,489] [pool-1-thread-12] Initializing /data/misc/wtembryo.tiff: [testng] 01:38:09,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:38:09,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:09,490 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-19_01-38-09.log] [testng] 01:38:09,491 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26f618c2 - End of configuration. [testng] [2024-10-19 01:38:09,679] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] 01:38:09,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:38:09,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:09,680 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-19_01-38-09.log] [testng] 01:38:09,681 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e7440e6 - End of configuration. [testng] [2024-10-19 01:38:09,959] [pool-1-thread-10] Initializing /data/brian/Alx-488-pk.tif: [testng] 01:38:09,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:38:09,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:09,960 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-19_01-38-09.log] [testng] 01:38:09,960 |-INFO in ch.qos.logback.core.sift.SiftProcessor@488d3026 - End of configuration. [testng] [2024-10-19 01:38:10,170] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] 01:38:10,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:38:10,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:10,171 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-19_01-38-10.log] [testng] 01:38:10,171 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1baa8077 - End of configuration. [testng] [2024-10-19 01:38:10,488] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] 01:38:10,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:38:10,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:10,489 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-19_01-38-10.log] [testng] 01:38:10,489 |-INFO in ch.qos.logback.core.sift.SiftProcessor@639d2302 - End of configuration. [testng] [2024-10-19 01:38:10,685] [pool-1-thread-7] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] 01:38:10,685 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:38:10,685 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:10,686 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-19_01-38-10.log] [testng] 01:38:10,686 |-INFO in ch.qos.logback.core.sift.SiftProcessor@450da318 - End of configuration. [testng] [2024-10-19 01:38:12,498] [pool-1-thread-6] Initializing /data/public/libtiff/oxford.tif: [testng] 01:38:12,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:38:12,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:12,498 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-19_01-38-12.log] [testng] 01:38:12,499 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a23561 - End of configuration. [testng] [2024-10-19 01:38:13,094] [pool-1-thread-5] Initializing /data/brian/Ch1_fld1.tif: [testng] 01:38:13,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:38:13,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:13,096 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-19_01-38-13.log] [testng] 01:38:13,097 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33fb6796 - End of configuration. [testng] [2024-10-19 01:38:13,598] [pool-1-thread-4] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] 01:38:13,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:38:13,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:13,599 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-19_01-38-13.log] [testng] 01:38:13,599 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1cb1d9de - End of configuration. [testng] [2024-10-19 01:38:13,947] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] 01:38:13,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:38:13,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:13,948 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-19_01-38-13.log] [testng] 01:38:13,948 |-INFO in ch.qos.logback.core.sift.SiftProcessor@474cc603 - End of configuration. [testng] [2024-10-19 01:38:14,286] [pool-1-thread-2] Initializing /data/jae/first image.tif: [testng] 01:38:14,286 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:38:14,286 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:38:14,286 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-19_01-38-14.log] [testng] 01:38:14,287 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24661a1c - End of configuration. [testng] [2024-10-19 01:38:19,289] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-10-19 01:38:20,290] [pool-1-thread-10] Initializing /data/josiah/cell-Z6.C1.tiff: [testng] [2024-10-19 01:38:20,822] [pool-1-thread-4] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-10-19 01:38:21,780] [pool-1-thread-12] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-10-19 01:38:22,480] [pool-1-thread-6] Initializing /data/big-images/2kx2k.tif: [testng] [2024-10-19 01:38:22,949] [pool-1-thread-3] Initializing /data/josiah/cell-Z9.C0.tiff: [testng] [2024-10-19 01:38:23,484] [pool-1-thread-1] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-10-19 01:38:24,260] [pool-1-thread-11] Initializing /data/josiah/cell-Z10.C0.tiff: [testng] [2024-10-19 01:38:24,779] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-10-19 01:38:25,132] [pool-1-thread-9] Initializing /data/josiah/cell-Z20.C0.tiff: [testng] [2024-10-19 01:38:28,863] [pool-1-thread-2] Initializing /data/public/condensation/E4.pattern7.tif: [testng] [2024-10-19 01:38:30,864] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-10-19 01:38:31,423] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] [2024-10-19 01:38:32,427] [pool-1-thread-10] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-10-19 01:38:33,130] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x64.tiff: [testng] [2024-10-19 01:38:34,136] [pool-1-thread-8] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-10-19 01:38:35,486] [pool-1-thread-4] Initializing /data/kevino/_BF_00004.tif: [testng] [2024-10-19 01:38:36,657] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-10-19 01:38:37,581] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-10-19 01:38:38,661] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-10-19 01:38:45,095] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-10-19 01:38:48,699] [pool-1-thread-12] Initializing /data/wayne/mBoeglin_lzw/mm_7.1.2.0.tif: [testng] [2024-10-19 01:38:49,952] [pool-1-thread-10] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-10-19 01:38:51,512] [pool-1-thread-7] Initializing /data/tom/TLD - n000000_Stamp.tif: [testng] [2024-10-19 01:38:52,926] [pool-1-thread-3] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-10-19 01:38:54,020] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-10-19 01:38:55,098] [pool-1-thread-8] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-10-19 01:38:56,300] [pool-1-thread-1] Initializing /data/glen/742015a20x3middle16bit.tif: [testng] [2024-10-19 01:38:57,365] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-10-19 01:38:58,735] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-10-19 01:38:59,909] [pool-1-thread-6] Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-10-19 01:39:02,151] [pool-1-thread-5] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-10-19 01:39:06,687] [pool-1-thread-2] Initializing /data/public/condensation/B12.pattern2.tif: [testng] [2024-10-19 01:39:10,162] [pool-1-thread-11] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-10-19 01:39:11,639] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-10-19 01:39:13,090] [pool-1-thread-9] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-10-19 01:39:14,354] [pool-1-thread-4] Initializing /data/tamjid/Image_843.tif: [testng] [2024-10-19 01:39:15,485] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-10-19 01:39:16,491] [pool-1-thread-10] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-10-19 01:39:17,492] [pool-1-thread-1] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-10-19 01:39:19,960] [pool-1-thread-12] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-10-19 01:39:21,159] [pool-1-thread-8] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-10-19 01:39:22,496] [pool-1-thread-5] Initializing /data/ascb/CYT-49_FriendSecretoryPair_4800.tif: [testng] [2024-10-19 01:39:28,735] [pool-1-thread-2] Initializing /data/damian/36m.tiff: [testng] [2024-10-19 01:39:29,922] [pool-1-thread-6] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-10-19 01:39:32,762] [pool-1-thread-8] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-10-19 01:39:34,072] [pool-1-thread-11] Initializing 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01:47:45,109] [pool-1-thread-4] Initializing /data/misc/mri-new.mov: [testng] [2024-10-19 01:47:45,150] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z025.tif: [testng] [2024-10-19 01:47:46,298] [pool-1-thread-4] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-10-19 01:47:46,889] [pool-1-thread-3] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-10-19 01:47:47,157] [pool-1-thread-10] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-10-19 01:47:47,497] [pool-1-thread-1] Initializing /data/julien/baldindq-OVA.TIF: [testng] [2024-10-19 01:47:47,884] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-10-19 01:47:48,294] [pool-1-thread-12] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-10-19 01:47:48,769] [pool-1-thread-6] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-10-19 01:47:49,122] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z057.tif: [testng] [2024-10-19 01:47:49,376] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-10-19 01:47:49,767] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-10-19 01:47:52,280] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-10-19 01:47:53,814] [pool-1-thread-10] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-10-19 01:47:54,655] [pool-1-thread-1] Initializing /data/misc/mri-old.mov: [testng] [2024-10-19 01:47:55,112] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-10-19 01:47:55,752] [pool-1-thread-6] Initializing /data/kevino/_BF_00003.tif: [testng] [2024-10-19 01:47:56,083] [pool-1-thread-5] Initializing /data/public/libtiff/cramps-tile.tif: [testng] [2024-10-19 01:47:56,555] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-10-19 01:47:56,971] [pool-1-thread-7] Initializing 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/data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-10-19 01:48:00,687] [pool-1-thread-12] Initializing /data/damian/18m.tiff: [testng] [2024-10-19 01:48:02,523] [pool-1-thread-2] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-10-19 01:48:04,041] [pool-1-thread-9] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] [2024-10-19 01:48:04,460] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x16.tiff: [testng] [2024-10-19 01:48:04,833] [pool-1-thread-1] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-10-19 01:48:05,892] [pool-1-thread-10] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-10-19 01:48:06,374] [pool-1-thread-11] Initializing /data/tom-kazimiers/test_exiftool2_resave2.tiff: [testng] [2024-10-19 01:48:06,943] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-10-19 01:48:07,197] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-10-19 01:48:07,425] [pool-1-thread-12] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-10-19 01:48:08,289] [pool-1-thread-8] Initializing /data/jerome/e346_plt1(m)_F1-6.tif: [testng] [2024-10-19 01:48:09,210] [pool-1-thread-3] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-10-19 01:48:09,507] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z061.tif: [testng] [2024-10-19 01:48:09,805] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-10-19 01:48:10,091] [pool-1-thread-10] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-10-19 01:48:10,529] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z032.tif: [testng] [2024-10-19 01:48:10,785] [pool-1-thread-7] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-10-19 01:48:11,758] [pool-1-thread-12] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-10-19 01:48:13,096] [pool-1-thread-3] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-10-19 01:48:13,431] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-01.tiff: [testng] [2024-10-19 01:48:13,758] [pool-1-thread-9] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-10-19 01:48:14,096] [pool-1-thread-11] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-10-19 01:48:14,365] [pool-1-thread-7] Initializing /data/misc/ms-paint.png: [testng] [2024-10-19 01:48:14,411] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z032.tif: [testng] [2024-10-19 01:48:14,997] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-10-19 01:48:15,858] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z024.tif: [testng] [2024-10-19 01:48:16,152] [pool-1-thread-12] Initializing /data/chris-lesiak/half-float.tiff: [testng] [2024-10-19 01:48:16,874] [pool-1-thread-3] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-10-19 01:48:17,583] [pool-1-thread-8] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] [2024-10-19 01:48:18,364] [pool-1-thread-11] Initializing /data/stephane/Copy of listeria + clathrin1_w3Cy5.tif: [testng] [2024-10-19 01:48:18,675] [pool-1-thread-6] Initializing /data/josh/stack.tif: [testng] [2024-10-19 01:48:19,044] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] [2024-10-19 01:48:19,268] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-10-19 01:48:19,727] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-10-19 01:48:20,161] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-10-19 01:48:20,992] [pool-1-thread-1] Initializing /data/josiah/cell-Z36.C1.tiff: [testng] [2024-10-19 01:48:21,331] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-10-19 01:48:22,003] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z045.tif: [testng] [2024-10-19 01:48:22,387] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-10-19 01:48:22,770] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z032.tif: [testng] [2024-10-19 01:48:23,089] [pool-1-thread-5] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-10-19 01:48:23,438] [pool-1-thread-6] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-10-19 01:48:23,715] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-10-19 01:48:23,956] [pool-1-thread-7] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-10-19 01:48:24,194] [pool-1-thread-4] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-10-19 01:48:31,664] [pool-1-thread-2] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] [2024-10-19 01:48:33,516] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-10-19 01:48:33,826] [pool-1-thread-3] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-10-19 01:48:34,589] [pool-1-thread-9] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-10-19 01:48:34,847] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-10-19 01:48:35,423] [pool-1-thread-6] Initializing /data/carolyn/tumor_4.tif: [testng] [2024-10-19 01:48:36,152] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-10-19 01:48:36,681] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-10-19 01:48:37,119] [pool-1-thread-5] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-10-19 01:48:37,558] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-10-19 01:48:37,926] [pool-1-thread-11] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-10-19 01:48:38,812] [pool-1-thread-1] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-10-19 01:48:39,099] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-10-19 01:48:39,635] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x32.tiff: [testng] [2024-10-19 01:48:40,665] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-10-19 01:48:42,198] [pool-1-thread-10] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] [2024-10-19 01:48:42,629] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-10-19 01:48:43,202] [pool-1-thread-6] Initializing /data/josiah/cell-Z0.C0.tiff: [testng] [2024-10-19 01:48:43,466] [pool-1-thread-8] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-10-19 01:48:43,694] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z026.tif: [testng] [2024-10-19 01:48:43,959] [pool-1-thread-11] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-10-19 01:48:44,103] [pool-1-thread-3] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-10-19 01:48:44,367] [pool-1-thread-1] Initializing /data/public/condensation/E4.pattern6.tif: [testng] [2024-10-19 01:48:46,192] [pool-1-thread-12] Initializing /data/damian/damian.tif: [testng] [2024-10-19 01:48:46,825] [pool-1-thread-10] Initializing /data/ascb/FND-24_GeorgeEPalade.tif: [testng] [2024-10-19 01:48:47,191] [pool-1-thread-7] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-10-19 01:48:47,574] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-10-19 01:48:47,847] [pool-1-thread-2] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-10-19 01:48:47,975] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-10-19 01:48:48,165] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0246.TIF: [testng] [2024-10-19 01:48:49,415] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] [2024-10-19 01:48:50,652] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-10-19 01:48:50,979] [pool-1-thread-2] Initializing /data/brian/datamanager.tiff: [testng] [2024-10-19 01:48:51,334] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z051.tif: [testng] [2024-10-19 01:48:51,653] [pool-1-thread-1] Initializing /data/qa-4968/twocars2.tif: [testng] [2024-10-19 01:48:51,982] [pool-1-thread-9] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 23 minutes 5 seconds Finished: SUCCESS