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Started by upstream project "BIOFORMATS-test-repo" build number 232
originally caused by:
 Started by upstream project "Trigger" build number 257
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2
[BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins3866668612702955440.sh
+ '[' specs = slidebook ']'
++ date +%u
+ '[' 3 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_36391_merge_ci -v /uod/idr/repos/curated/specs:/data -v /uod/idr-scratch/merge-ci/curated/specs:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:33:43,674 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:33:43,676 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service.
   [testng] 01:33:43,676 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:33:43,677 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:33:43,677 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:33:43,677 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:33:43,678 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:33:43,678 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:33:43,678 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:33:43,679 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:33:43,679 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:33:43,679 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:33:43,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:33:43,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:33:43,872 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:33:43,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:33:43,878 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:33:43,878 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:33:43,878 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:33:43,878 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:33:43,878 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration.
   [testng] 01:33:43,880 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point
   [testng] 01:33:43,880 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 202 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-10-23 01:33:43,888] [main] java.version = 17.0.2
   [testng] 01:33:43,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:33:43,891 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:33:43,930 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-23_01-33-43.log]
   [testng] 01:33:43,931 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration.
   [testng] [2024-10-23 01:33:43,933] [main] testng.directory = /data
   [testng] [2024-10-23 01:33:43,933] [main] testng.configDirectory = /config
   [testng] [2024-10-23 01:33:43,941] [main] testng.multiplier = 1.0
   [testng] [2024-10-23 01:33:43,942] [main] testng.in-memory = false
   [testng] [2024-10-23 01:33:43,942] [main] testng.allow-missing = false
   [testng] [2024-10-23 01:33:43,942] [main] user.language = en
   [testng] [2024-10-23 01:33:43,942] [main] user.country = ${user.country}
   [testng] [2024-10-23 01:33:43,942] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-10-23 01:36:02,080] [main] ----------------------------------------
   [testng] [2024-10-23 01:36:02,080] [main] Total files: 226
   [testng] [2024-10-23 01:36:02,081] [main] Scan time: 138.138 s (611 ms/file)
   [testng] [2024-10-23 01:36:02,081] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 28 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-10-23 01:39:37,886] [pool-1-thread-1] Initializing /data/fluoview/SpineAnimation.tif: 
   [testng] 01:39:37,886 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:39:37,886 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:37,888 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-23_01-39-37.log]
   [testng] 01:39:37,888 |-INFO in ch.qos.logback.core.sift.SiftProcessor@753b20c8 - End of configuration.
   [testng] [2024-10-23 01:39:39,084] [pool-1-thread-12] Initializing /data/fluoview/Sample_XYZ.TIF: 
   [testng] 01:39:39,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:39:39,084 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:39,085 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-23_01-39-39.log]
   [testng] 01:39:39,085 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d0405b4 - End of configuration.
   [testng] [2024-10-23 01:39:40,247] [pool-1-thread-11] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test2.dm3: 
   [testng] 01:39:40,247 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:39:40,248 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:40,249 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-23_01-39-40.log]
   [testng] 01:39:40,249 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e415ae3 - End of configuration.
   [testng] [2024-10-23 01:39:40,647] [pool-1-thread-10] Initializing /data/iplab/Blend_Dapi.IPL: 
   [testng] 01:39:40,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:39:40,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:40,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-23_01-39-40.log]
   [testng] 01:39:40,648 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60e0ecfa - End of configuration.
   [testng] [2024-10-23 01:39:40,975] [pool-1-thread-9] Initializing /data/iplab/Blend_Fitc.IPL: 
   [testng] 01:39:40,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:39:40,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:40,976 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-23_01-39-40.log]
   [testng] 01:39:40,976 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5244f91f - End of configuration.
   [testng] [2024-10-23 01:39:41,205] [pool-1-thread-8] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-2.lsm: 
   [testng] 01:39:41,205 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:39:41,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:41,207 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-23_01-39-41.log]
   [testng] 01:39:41,207 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bc9ab94 - End of configuration.
   [testng] [2024-10-23 01:39:42,779] [pool-1-thread-7] Initializing /data/iplab/Color Histology.IPL: 
   [testng] 01:39:42,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:39:42,779 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:42,780 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-23_01-39-42.log]
   [testng] 01:39:42,780 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64482366 - End of configuration.
   [testng] [2024-10-23 01:39:42,920] [pool-1-thread-6] Initializing /data/iplab/Blend_Final.IPL: 
   [testng] 01:39:42,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:39:42,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:42,921 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-23_01-39-42.log]
   [testng] 01:39:42,921 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c425b87 - End of configuration.
   [testng] [2024-10-23 01:39:43,050] [pool-1-thread-5] Initializing /data/fluoview/Sample_XT.tif: 
   [testng] 01:39:43,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:39:43,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:43,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-23_01-39-43.log]
   [testng] 01:39:43,052 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36adcaa0 - End of configuration.
   [testng] [2024-10-23 01:39:44,080] [pool-1-thread-4] Initializing /data/iplab/Blend_DIC.IPL: 
   [testng] 01:39:44,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:39:44,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:44,081 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-23_01-39-44.log]
   [testng] 01:39:44,082 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71b5cb66 - End of configuration.
   [testng] [2024-10-23 01:39:44,248] [pool-1-thread-3] Initializing /data/fluoview/sample_labled_XYTCh.tif: 
   [testng] 01:39:44,248 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:39:44,248 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:44,249 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-23_01-39-44.log]
   [testng] 01:39:44,250 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b2de5d9 - End of configuration.
   [testng] [2024-10-23 01:39:45,137] [pool-1-thread-2] Initializing /data/iplab/16Bit XRay.IPL: 
   [testng] 01:39:45,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:39:45,137 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:39:45,138 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-23_01-39-45.log]
   [testng] 01:39:45,138 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56c73bfd - End of configuration.
   [testng] [2024-10-23 01:39:48,198] [pool-1-thread-7] Initializing /data/iplab/Actin.IPL: 
   [testng] [2024-10-23 01:39:48,352] [pool-1-thread-2] Initializing /data/fluoview/Sample_XYT.TIF: 
   [testng] [2024-10-23 01:39:49,062] [pool-1-thread-6] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile--MultiTrack-1.lsm: 
   [testng] [2024-10-23 01:39:49,764] [pool-1-thread-9] Initializing /data/iplab/3t3 Cell.IPL: 
   [testng] [2024-10-23 01:39:49,889] [pool-1-thread-10] Initializing /data/fluoview/SpineAnimation.avi: 
   [testng] [2024-10-23 01:39:50,217] [pool-1-thread-4] Initializing /data/iplab/Color Image.IPL: 
   [testng] [2024-10-23 01:39:50,337] [pool-1-thread-11] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/test3.dm3: 
   [testng] [2024-10-23 01:39:52,317] [pool-1-thread-9] Initializing /data/fluoview/Sample_TwoCH.TIF: 
   [testng] [2024-10-23 01:39:53,158] [pool-1-thread-7] Initializing /data/iplab/10x Blood and Bacteria.IPL: 
   [testng] [2024-10-23 01:39:53,307] [pool-1-thread-4] Initializing /data/iplab/Chromosomes.IPL: 
   [testng] [2024-10-23 01:39:53,481] [pool-1-thread-11] Initializing /data/iplab/Blend_Tritc.IPL: 
   [testng] [2024-10-23 01:39:53,803] [pool-1-thread-3] Initializing /data/zeiss_lsm/X-Y-Z-T-Ch-Tile-1.lsm: 
   [testng] [2024-10-23 01:39:54,534] [pool-1-thread-5] Initializing /data/fluoview/sample_labled_XYZCh.tif: 
   [testng] [2024-10-23 01:39:55,346] [pool-1-thread-12] Initializing /data/fluoview/Sample_ThreeCH.TIF: 
   [testng] [2024-10-23 01:39:56,052] [pool-1-thread-1] Initializing /data/fluoview/sample_labled_XYZTCh.tif: 
   [testng] [2024-10-23 01:39:57,273] [pool-1-thread-10] Initializing /data/gatan/ImageReader2003/ImageReaderTest/TestFiles/Test.dm3: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1484, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 6 minutes 31 seconds
Finished: SUCCESS