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Started by upstream project "BIOFORMATS-test-repo" build number 250 originally caused by: Started by upstream project "Trigger" build number 274 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins12295681001984979277.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_39328_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:22:17,205 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:22:17,207 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 00:22:17,207 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:17,208 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:22:17,208 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:22:17,208 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:22:17,209 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:22:17,209 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:17,209 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:22:17,210 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:22:17,210 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:22:17,210 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:22:17,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:22:17,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:22:17,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:22:17,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:22:17,415 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:22:17,416 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:22:17,416 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:22:17,416 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:22:17,416 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 00:22:17,417 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 00:22:17,417 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 208 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-09 00:22:17,427] [main] java.version = 11.0.16 [testng] 00:22:17,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:22:17,430 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:17,474 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-09_00-22-17.log] [testng] 00:22:17,475 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-11-09 00:22:17,477] [main] testng.directory = /data [testng] [2024-11-09 00:22:17,478] [main] testng.configDirectory = /config [testng] [2024-11-09 00:22:17,488] [main] testng.multiplier = 1.0 [testng] [2024-11-09 00:22:17,490] [main] testng.in-memory = false [testng] [2024-11-09 00:22:17,490] [main] testng.allow-missing = false [testng] [2024-11-09 00:22:17,490] [main] user.language = en [testng] [2024-11-09 00:22:17,490] [main] user.country = ${user.country} [testng] [2024-11-09 00:22:17,490] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-09 00:23:05,463] [main] ---------------------------------------- [testng] [2024-11-09 00:23:05,463] [main] Total files: 4426 [testng] [2024-11-09 00:23:05,463] [main] Scan time: 47.973 s (10 ms/file) [testng] [2024-11-09 00:23:05,463] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-09 00:43:44,516] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] 00:43:44,517 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:43:44,518 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:44,520 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-09_00-43-44.log] [testng] 00:43:44,520 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3eff3599 - End of configuration. [testng] [2024-11-09 00:43:44,984] [pool-1-thread-12] Initializing /data/misc/wtembryo.tiff: [testng] 00:43:44,985 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:43:44,985 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:44,986 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-09_00-43-44.log] [testng] 00:43:44,986 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50b4d28f - End of configuration. [testng] [2024-11-09 00:43:45,448] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] 00:43:45,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:43:45,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:45,449 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-09_00-43-45.log] [testng] 00:43:45,450 |-INFO in ch.qos.logback.core.sift.SiftProcessor@83c57e1 - End of configuration. [testng] [2024-11-09 00:43:45,914] [pool-1-thread-10] Initializing /data/brian/Alx-488-pk.tif: [testng] 00:43:45,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:43:45,914 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:45,915 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-09_00-43-45.log] [testng] 00:43:45,915 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ebbf4a6 - End of configuration. [testng] [2024-11-09 00:43:46,374] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] 00:43:46,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:43:46,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:46,375 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-09_00-43-46.log] [testng] 00:43:46,375 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33784e11 - End of configuration. [testng] [2024-11-09 00:43:46,853] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] 00:43:46,853 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:43:46,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:46,854 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-09_00-43-46.log] [testng] 00:43:46,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46be64dc - End of configuration. [testng] [2024-11-09 00:43:47,282] [pool-1-thread-7] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] 00:43:47,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:43:47,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:47,283 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-09_00-43-47.log] [testng] 00:43:47,284 |-INFO in ch.qos.logback.core.sift.SiftProcessor@676f265c - End of configuration. [testng] [2024-11-09 00:43:48,828] [pool-1-thread-6] Initializing /data/public/libtiff/oxford.tif: [testng] 00:43:48,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:43:48,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:48,829 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-09_00-43-48.log] [testng] 00:43:48,829 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66492704 - End of configuration. [testng] [2024-11-09 00:43:49,417] [pool-1-thread-5] Initializing /data/brian/Ch1_fld1.tif: [testng] 00:43:49,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:43:49,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:49,418 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-09_00-43-49.log] [testng] 00:43:49,419 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65b6e3e5 - End of configuration. [testng] [2024-11-09 00:43:50,156] [pool-1-thread-4] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] 00:43:50,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:43:50,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:50,157 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-09_00-43-50.log] [testng] 00:43:50,157 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68c189d5 - End of configuration. [testng] [2024-11-09 00:43:51,046] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] 00:43:51,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:43:51,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:51,047 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-09_00-43-51.log] [testng] 00:43:51,048 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f0950bf - End of configuration. [testng] [2024-11-09 00:43:51,786] [pool-1-thread-2] Initializing /data/jae/first image.tif: [testng] 00:43:51,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:43:51,786 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:43:51,787 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-09_00-43-51.log] [testng] 00:43:51,787 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7181b13 - End of configuration. [testng] [2024-11-09 00:44:00,934] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-11-09 00:44:01,690] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-11-09 00:44:02,609] [pool-1-thread-11] Initializing /data/josiah/cell-Z6.C1.tiff: [testng] [2024-11-09 00:44:03,590] [pool-1-thread-6] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-11-09 00:44:04,554] [pool-1-thread-12] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-11-09 00:44:05,532] [pool-1-thread-3] Initializing /data/big-images/2kx2k.tif: [testng] [2024-11-09 00:44:06,405] [pool-1-thread-4] Initializing /data/josiah/cell-Z9.C0.tiff: [testng] [2024-11-09 00:44:07,285] [pool-1-thread-10] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-11-09 00:44:07,858] [pool-1-thread-9] Initializing /data/josiah/cell-Z10.C0.tiff: [testng] [2024-11-09 00:44:08,434] [pool-1-thread-8] Initializing /data/josiah/cell-Z20.C0.tiff: [testng] [2024-11-09 00:44:16,159] [pool-1-thread-2] Initializing /data/public/condensation/E4.pattern7.tif: [testng] [2024-11-09 00:44:16,890] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-11-09 00:44:17,512] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-11-09 00:44:18,104] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] [2024-11-09 00:44:18,611] [pool-1-thread-9] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-11-09 00:44:19,973] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x64.tiff: [testng] [2024-11-09 00:44:21,219] [pool-1-thread-8] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-11-09 00:44:22,118] [pool-1-thread-12] Initializing /data/kevino/_BF_00004.tif: [testng] [2024-11-09 00:44:22,712] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-11-09 00:44:24,458] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-11-09 00:44:26,903] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-11-09 00:44:40,268] [pool-1-thread-1] Initializing /data/wayne/mBoeglin_lzw/mm_7.1.2.0.tif: [testng] [2024-11-09 00:44:41,497] [pool-1-thread-2] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-11-09 00:44:42,772] [pool-1-thread-9] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-11-09 00:44:43,929] [pool-1-thread-11] Initializing /data/glen/742015a20x3middle16bit.tif: [testng] [2024-11-09 00:44:45,591] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-11-09 00:44:46,874] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-11-09 00:44:48,014] [pool-1-thread-10] Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-11-09 00:44:49,142] [pool-1-thread-4] Initializing /data/tom/TLD - n000000_Stamp.tif: [testng] [2024-11-09 00:44:50,930] [pool-1-thread-8] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-11-09 00:44:52,059] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-11-09 00:44:52,890] [pool-1-thread-12] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-11-09 00:44:54,517] [pool-1-thread-7] Initializing /data/public/condensation/B12.pattern2.tif: [testng] [2024-11-09 00:45:04,841] [pool-1-thread-1] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-11-09 00:45:07,027] [pool-1-thread-5] Initializing /data/tamjid/Image_843.tif: [testng] [2024-11-09 00:45:08,562] [pool-1-thread-3] Initializing /data/ascb/CYT-49_FriendSecretoryPair_4800.tif: [testng] [2024-11-09 00:45:09,854] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-11-09 00:45:10,979] [pool-1-thread-6] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-11-09 00:45:12,611] [pool-1-thread-4] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-11-09 00:45:14,787] [pool-1-thread-9] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-11-09 00:45:16,492] [pool-1-thread-2] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-11-09 00:45:17,666] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-11-09 00:45:18,892] [pool-1-thread-11] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-11-09 00:45:20,031] [pool-1-thread-12] Initializing /data/damian/36m.tiff: [testng] [2024-11-09 00:45:20,850] [pool-1-thread-10] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-11-09 00:45:25,796] [pool-1-thread-1] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-11-09 00:45:28,733] [pool-1-thread-7] Initializing 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00:58:38,939] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z015.tif: [testng] [2024-11-09 00:58:39,461] [pool-1-thread-9] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-11-09 00:58:40,068] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-11-09 00:58:40,451] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-11-09 00:58:40,866] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0235.TIF: [testng] [2024-11-09 00:58:41,657] [pool-1-thread-6] Initializing /data/ascb/FND-1_PorterClaudeFullamFirst_4800.tif: [testng] [2024-11-09 00:58:42,327] [pool-1-thread-5] Initializing /data/misc/9 h test.tif: [testng] [2024-11-09 00:58:45,633] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-11-09 00:58:46,198] [pool-1-thread-3] Initializing /data/public/libtiff/quad-tile.tif: [testng] [2024-11-09 00:58:46,836] [pool-1-thread-4] Initializing 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/data/josiah/cell-Z30.C0.tiff: [testng] [2024-11-09 00:58:56,599] [pool-1-thread-1] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-11-09 00:58:57,187] [pool-1-thread-5] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-11-09 00:58:58,195] [pool-1-thread-2] Initializing /data/julien/baldindq-OVA.TIF: [testng] [2024-11-09 00:58:58,999] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-11-09 00:58:59,511] [pool-1-thread-8] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-11-09 00:59:00,030] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-11-09 00:59:02,056] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z057.tif: [testng] [2024-11-09 00:59:03,555] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-11-09 00:59:05,855] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-11-09 00:59:08,433] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-11-09 00:59:10,270] [pool-1-thread-3] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-11-09 00:59:11,011] [pool-1-thread-5] Initializing /data/misc/mri-old.mov: [testng] [2024-11-09 00:59:11,616] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-11-09 00:59:12,437] [pool-1-thread-2] Initializing /data/public/libtiff/cramps-tile.tif: [testng] [2024-11-09 00:59:13,150] [pool-1-thread-10] Initializing /data/kevino/_BF_00003.tif: [testng] [2024-11-09 00:59:14,254] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-11-09 00:59:15,081] [pool-1-thread-4] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-11-09 00:59:15,848] [pool-1-thread-11] Initializing /data/tobias/test002_1.tif: [testng] [2024-11-09 00:59:16,367] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0223.TIF: [testng] [2024-11-09 00:59:16,922] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x16.tiff: [testng] [2024-11-09 00:59:17,793] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0216.TIF: [testng] [2024-11-09 00:59:18,687] [pool-1-thread-6] Initializing /data/josiah/cell-Z32.C0.tiff: [testng] [2024-11-09 00:59:20,599] [pool-1-thread-3] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] [2024-11-09 00:59:23,426] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-11-09 00:59:24,268] [pool-1-thread-2] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-11-09 00:59:25,174] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-11-09 00:59:26,123] [pool-1-thread-5] Initializing /data/damian/18m.tiff: [testng] [2024-11-09 00:59:26,722] [pool-1-thread-7] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-11-09 00:59:28,967] [pool-1-thread-4] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] [2024-11-09 00:59:29,539] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x16.tiff: [testng] [2024-11-09 00:59:30,034] [pool-1-thread-11] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-11-09 00:59:31,808] [pool-1-thread-12] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-11-09 00:59:35,150] [pool-1-thread-6] Initializing /data/tom-kazimiers/test_exiftool2_resave2.tiff: [testng] [2024-11-09 00:59:37,146] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-11-09 00:59:37,798] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-11-09 00:59:38,558] [pool-1-thread-8] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-11-09 00:59:39,338] [pool-1-thread-9] Initializing /data/jerome/e346_plt1(m)_F1-6.tif: [testng] [2024-11-09 00:59:40,191] [pool-1-thread-5] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-11-09 00:59:40,869] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-11-09 00:59:41,317] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z061.tif: [testng] [2024-11-09 00:59:41,712] [pool-1-thread-1] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-11-09 00:59:45,144] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z032.tif: [testng] [2024-11-09 00:59:45,985] [pool-1-thread-3] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-11-09 00:59:46,990] [pool-1-thread-2] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-11-09 00:59:48,613] [pool-1-thread-10] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-11-09 00:59:49,442] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-01.tiff: [testng] [2024-11-09 00:59:50,273] [pool-1-thread-12] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-11-09 00:59:51,256] [pool-1-thread-4] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-11-09 00:59:51,983] [pool-1-thread-5] Initializing /data/misc/ms-paint.png: [testng] [2024-11-09 00:59:52,008] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z032.tif: [testng] [2024-11-09 00:59:53,861] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-11-09 00:59:55,106] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z024.tif: [testng] [2024-11-09 00:59:56,896] [pool-1-thread-3] Initializing /data/chris-lesiak/half-float.tiff: [testng] [2024-11-09 00:59:57,758] [pool-1-thread-6] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-11-09 00:59:58,588] [pool-1-thread-2] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] [2024-11-09 00:59:59,654] [pool-1-thread-8] Initializing /data/stephane/Copy of listeria + clathrin1_w3Cy5.tif: [testng] [2024-11-09 01:00:00,441] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] [2024-11-09 01:00:05,733] [pool-1-thread-4] Initializing /data/josh/stack.tif: [testng] [2024-11-09 01:00:06,489] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-11-09 01:00:07,317] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-11-09 01:00:08,414] [pool-1-thread-11] Initializing /data/josiah/cell-Z36.C1.tiff: [testng] [2024-11-09 01:00:09,843] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-11-09 01:00:10,910] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-11-09 01:00:11,431] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z045.tif: [testng] [2024-11-09 01:00:14,590] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-11-09 01:00:15,535] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z032.tif: [testng] [2024-11-09 01:00:16,571] [pool-1-thread-3] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-11-09 01:00:17,249] [pool-1-thread-10] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-11-09 01:00:20,304] [pool-1-thread-6] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-11-09 01:00:21,614] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-11-09 01:00:22,184] [pool-1-thread-7] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-11-09 01:00:22,781] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-11-09 01:00:23,312] [pool-1-thread-9] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] [2024-11-09 01:00:23,826] [pool-1-thread-12] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-11-09 01:00:34,121] [pool-1-thread-4] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-11-09 01:00:36,847] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-11-09 01:00:37,756] [pool-1-thread-10] Initializing /data/carolyn/tumor_4.tif: [testng] [2024-11-09 01:00:39,394] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-11-09 01:00:40,703] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-11-09 01:00:41,701] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-11-09 01:00:44,112] [pool-1-thread-6] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-11-09 01:00:44,800] [pool-1-thread-5] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-11-09 01:00:45,605] [pool-1-thread-7] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-11-09 01:00:46,313] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x32.tiff: [testng] [2024-11-09 01:00:46,856] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-11-09 01:00:48,183] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-11-09 01:00:51,139] [pool-1-thread-3] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] [2024-11-09 01:00:51,880] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-11-09 01:00:52,359] [pool-1-thread-4] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-11-09 01:00:52,860] [pool-1-thread-1] Initializing /data/josiah/cell-Z0.C0.tiff: [testng] [2024-11-09 01:00:53,311] [pool-1-thread-8] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-11-09 01:00:54,529] [pool-1-thread-5] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-11-09 01:00:56,853] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z026.tif: [testng] [2024-11-09 01:00:58,277] [pool-1-thread-11] Initializing /data/public/condensation/E4.pattern6.tif: [testng] [2024-11-09 01:00:58,967] [pool-1-thread-7] Initializing /data/damian/damian.tif: [testng] [2024-11-09 01:01:00,648] [pool-1-thread-2] Initializing /data/ascb/FND-24_GeorgeEPalade.tif: [testng] [2024-11-09 01:01:03,881] [pool-1-thread-6] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-11-09 01:01:04,862] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-11-09 01:01:05,993] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-11-09 01:01:07,024] [pool-1-thread-3] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-11-09 01:01:11,531] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0246.TIF: [testng] [2024-11-09 01:01:12,383] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] [2024-11-09 01:01:13,470] [pool-1-thread-7] Initializing /data/brian/datamanager.tiff: [testng] [2024-11-09 01:01:14,531] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-11-09 01:01:15,129] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z051.tif: [testng] [2024-11-09 01:01:16,182] [pool-1-thread-10] Initializing /data/qa-4968/twocars2.tif: [testng] [2024-11-09 01:01:17,093] [pool-1-thread-6] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 39 minutes 10 seconds Finished: SUCCESS