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Started by upstream project "BIOFORMATS-test-repo" build number 257 originally caused by: Started by upstream project "Trigger" build number 281 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins2478150829879089513.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_40476_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:21:10,795 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:21:10,797 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 00:21:10,797 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:10,798 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:10,798 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:21:10,799 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:21:10,799 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:21:10,799 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:10,800 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:10,801 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:21:10,801 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:21:10,802 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:21:11,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:21:11,051 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:21:11,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:21:11,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:21:11,086 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:21:11,086 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:21:11,086 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:21:11,087 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:21:11,087 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 00:21:11,088 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 00:21:11,088 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 288 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-11-16 00:21:11,097] [main] java.version = 11.0.16 [testng] 00:21:11,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:21:11,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:11,142 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-11-16_00-21-11.log] [testng] 00:21:11,144 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-11-16 00:21:11,146] [main] testng.directory = /data [testng] [2024-11-16 00:21:11,146] [main] testng.configDirectory = /config [testng] [2024-11-16 00:21:11,157] [main] testng.multiplier = 1.0 [testng] [2024-11-16 00:21:11,158] [main] testng.in-memory = false [testng] [2024-11-16 00:21:11,158] [main] testng.allow-missing = false [testng] [2024-11-16 00:21:11,159] [main] user.language = en [testng] [2024-11-16 00:21:11,159] [main] user.country = ${user.country} [testng] [2024-11-16 00:21:11,159] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-11-16 00:21:54,782] [main] ---------------------------------------- [testng] [2024-11-16 00:21:54,782] [main] Total files: 4426 [testng] [2024-11-16 00:21:54,783] [main] Scan time: 43.623 s (9 ms/file) [testng] [2024-11-16 00:21:54,783] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-11-16 00:33:49,830] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] 00:33:49,831 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:33:49,831 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:49,833 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-11-16_00-33-49.log] [testng] 00:33:49,834 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4253ffd1 - End of configuration. [testng] [2024-11-16 00:33:49,996] [pool-1-thread-12] Initializing /data/misc/wtembryo.tiff: [testng] 00:33:49,996 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:33:49,996 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:49,997 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-11-16_00-33-49.log] [testng] 00:33:49,998 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30b8f392 - End of configuration. [testng] [2024-11-16 00:33:50,180] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] 00:33:50,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:33:50,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:50,181 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-11-16_00-33-50.log] [testng] 00:33:50,182 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53858bc5 - End of configuration. [testng] [2024-11-16 00:33:50,314] [pool-1-thread-10] Initializing /data/brian/Alx-488-pk.tif: [testng] 00:33:50,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:33:50,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:50,315 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-11-16_00-33-50.log] [testng] 00:33:50,315 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69f98597 - End of configuration. [testng] [2024-11-16 00:33:50,481] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] 00:33:50,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:33:50,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:50,482 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-11-16_00-33-50.log] [testng] 00:33:50,482 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fa02a62 - End of configuration. [testng] [2024-11-16 00:33:50,660] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] 00:33:50,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:33:50,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:50,661 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-11-16_00-33-50.log] [testng] 00:33:50,661 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53cf9a19 - End of configuration. [testng] [2024-11-16 00:33:50,853] [pool-1-thread-7] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] 00:33:50,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:33:50,854 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:50,854 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-11-16_00-33-50.log] [testng] 00:33:50,855 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f8ce8e5 - End of configuration. [testng] [2024-11-16 00:33:53,234] [pool-1-thread-6] Initializing /data/public/libtiff/oxford.tif: [testng] 00:33:53,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:33:53,234 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:53,235 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-11-16_00-33-53.log] [testng] 00:33:53,235 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49a7c3f5 - End of configuration. [testng] [2024-11-16 00:33:53,507] [pool-1-thread-5] Initializing /data/brian/Ch1_fld1.tif: [testng] 00:33:53,507 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:33:53,507 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:53,508 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-11-16_00-33-53.log] [testng] 00:33:53,508 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11e6a4aa - End of configuration. [testng] [2024-11-16 00:33:53,731] [pool-1-thread-4] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] 00:33:53,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:33:53,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:53,732 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-11-16_00-33-53.log] [testng] 00:33:53,732 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5588900d - End of configuration. [testng] [2024-11-16 00:33:53,908] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] 00:33:53,908 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:33:53,908 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:53,908 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-11-16_00-33-53.log] [testng] 00:33:53,909 |-INFO in ch.qos.logback.core.sift.SiftProcessor@774758a4 - End of configuration. [testng] [2024-11-16 00:33:54,064] [pool-1-thread-2] Initializing /data/jae/first image.tif: [testng] 00:33:54,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:33:54,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:54,065 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-11-16_00-33-54.log] [testng] 00:33:54,065 |-INFO in ch.qos.logback.core.sift.SiftProcessor@702a16e4 - End of configuration. [testng] [2024-11-16 00:34:01,659] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-11-16 00:34:03,606] [pool-1-thread-4] Initializing /data/josiah/cell-Z6.C1.tiff: [testng] [2024-11-16 00:34:04,315] [pool-1-thread-12] Initializing /data/josiah/cell-Z20.C0.tiff: [testng] [2024-11-16 00:34:05,236] [pool-1-thread-8] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-11-16 00:34:05,799] [pool-1-thread-6] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-11-16 00:34:06,237] [pool-1-thread-9] Initializing /data/big-images/2kx2k.tif: [testng] [2024-11-16 00:34:06,886] [pool-1-thread-10] Initializing /data/josiah/cell-Z9.C0.tiff: [testng] [2024-11-16 00:34:08,098] [pool-1-thread-3] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-11-16 00:34:09,239] [pool-1-thread-11] Initializing /data/josiah/cell-Z10.C0.tiff: [testng] [2024-11-16 00:34:10,114] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-11-16 00:34:16,027] [pool-1-thread-1] Initializing /data/public/condensation/E4.pattern7.tif: [testng] [2024-11-16 00:34:18,994] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-11-16 00:34:20,121] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] [2024-11-16 00:34:21,212] [pool-1-thread-4] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-11-16 00:34:22,196] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x64.tiff: [testng] [2024-11-16 00:34:23,052] [pool-1-thread-10] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-11-16 00:34:24,147] [pool-1-thread-8] Initializing /data/kevino/_BF_00004.tif: [testng] [2024-11-16 00:34:25,345] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-11-16 00:34:26,913] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-11-16 00:34:28,512] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-11-16 00:34:36,010] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-11-16 00:34:37,484] [pool-1-thread-10] Initializing /data/wayne/mBoeglin_lzw/mm_7.1.2.0.tif: [testng] [2024-11-16 00:34:38,768] [pool-1-thread-7] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-11-16 00:34:40,781] [pool-1-thread-6] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-11-16 00:34:42,244] [pool-1-thread-2] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-11-16 00:34:43,588] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-11-16 00:34:44,934] [pool-1-thread-4] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-11-16 00:34:46,458] [pool-1-thread-9] Initializing /data/glen/742015a20x3middle16bit.tif: [testng] [2024-11-16 00:34:47,860] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-11-16 00:34:49,071] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-11-16 00:34:50,368] [pool-1-thread-11] Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-11-16 00:34:51,585] [pool-1-thread-3] Initializing /data/tom/TLD - n000000_Stamp.tif: [testng] [2024-11-16 00:34:59,330] [pool-1-thread-1] Initializing /data/public/condensation/B12.pattern2.tif: [testng] [2024-11-16 00:35:01,580] [pool-1-thread-10] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-11-16 00:35:03,887] [pool-1-thread-4] Initializing /data/tamjid/Image_843.tif: [testng] [2024-11-16 00:35:05,393] [pool-1-thread-5] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-11-16 00:35:07,011] [pool-1-thread-2] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-11-16 00:35:10,121] [pool-1-thread-8] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-11-16 00:35:11,514] [pool-1-thread-3] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-11-16 00:35:12,715] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-11-16 00:35:13,534] [pool-1-thread-12] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-11-16 00:35:14,819] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-11-16 00:35:16,422] [pool-1-thread-7] Initializing /data/ascb/CYT-49_FriendSecretoryPair_4800.tif: [testng] [2024-11-16 00:35:18,980] [pool-1-thread-11] Initializing /data/damian/36m.tiff: [testng] [2024-11-16 00:35:24,203] [pool-1-thread-1] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-11-16 00:35:26,123] [pool-1-thread-10] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-11-16 00:35:28,667] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z004.tif: 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00:44:11,451] [pool-1-thread-1] Initializing /data/misc/mri-new.mov: [testng] [2024-11-16 00:44:12,736] [pool-1-thread-1] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-11-16 00:44:13,499] [pool-1-thread-12] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-11-16 00:44:13,807] [pool-1-thread-3] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-11-16 00:44:14,141] [pool-1-thread-2] Initializing /data/julien/baldindq-OVA.TIF: [testng] [2024-11-16 00:44:14,611] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-11-16 00:44:15,094] [pool-1-thread-11] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-11-16 00:44:15,572] [pool-1-thread-10] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-11-16 00:44:15,923] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z057.tif: [testng] [2024-11-16 00:44:16,307] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-11-16 00:44:16,527] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-11-16 00:44:18,692] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-11-16 00:44:18,931] [pool-1-thread-12] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-11-16 00:44:19,162] [pool-1-thread-5] Initializing /data/misc/mri-old.mov: [testng] [2024-11-16 00:44:19,247] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-11-16 00:44:19,482] [pool-1-thread-11] Initializing /data/kevino/_BF_00003.tif: [testng] [2024-11-16 00:44:19,786] [pool-1-thread-10] Initializing /data/public/libtiff/cramps-tile.tif: [testng] [2024-11-16 00:44:20,425] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-11-16 00:44:20,714] [pool-1-thread-8] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-11-16 00:44:21,304] [pool-1-thread-5] Initializing 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/data/damian/18m.tiff: [testng] [2024-11-16 00:44:27,357] [pool-1-thread-5] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-11-16 00:44:28,946] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x16.tiff: [testng] [2024-11-16 00:44:30,218] [pool-1-thread-3] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] [2024-11-16 00:44:30,571] [pool-1-thread-9] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-11-16 00:44:32,319] [pool-1-thread-2] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-11-16 00:44:32,602] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-11-16 00:44:32,818] [pool-1-thread-10] Initializing /data/tom-kazimiers/test_exiftool2_resave2.tiff: [testng] [2024-11-16 00:44:34,304] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-11-16 00:44:34,986] [pool-1-thread-4] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-11-16 00:44:35,342] [pool-1-thread-6] Initializing /data/jerome/e346_plt1(m)_F1-6.tif: [testng] [2024-11-16 00:44:35,724] [pool-1-thread-11] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-11-16 00:44:36,406] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z061.tif: [testng] [2024-11-16 00:44:37,664] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-11-16 00:44:37,961] [pool-1-thread-10] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-11-16 00:44:39,082] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z032.tif: [testng] [2024-11-16 00:44:40,661] [pool-1-thread-8] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-11-16 00:44:41,259] [pool-1-thread-3] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-11-16 00:44:41,821] [pool-1-thread-7] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-11-16 00:44:42,243] [pool-1-thread-11] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-11-16 00:44:42,448] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-01.tiff: [testng] [2024-11-16 00:44:42,629] [pool-1-thread-6] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-11-16 00:44:42,892] [pool-1-thread-12] Initializing /data/misc/ms-paint.png: [testng] [2024-11-16 00:44:44,212] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z032.tif: [testng] [2024-11-16 00:44:44,641] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-11-16 00:44:45,853] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z024.tif: [testng] [2024-11-16 00:44:46,495] [pool-1-thread-5] Initializing /data/chris-lesiak/half-float.tiff: [testng] [2024-11-16 00:44:47,091] [pool-1-thread-4] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-11-16 00:44:47,383] [pool-1-thread-3] Initializing /data/josh/stack.tif: [testng] [2024-11-16 00:44:47,722] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] [2024-11-16 00:44:47,931] [pool-1-thread-7] Initializing /data/stephane/Copy of listeria + clathrin1_w3Cy5.tif: [testng] [2024-11-16 00:44:48,091] [pool-1-thread-6] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] [2024-11-16 00:44:48,987] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-11-16 00:44:50,307] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-11-16 00:44:50,561] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-11-16 00:44:50,870] [pool-1-thread-9] Initializing /data/josiah/cell-Z36.C1.tiff: [testng] [2024-11-16 00:44:51,178] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-11-16 00:44:51,631] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z045.tif: [testng] [2024-11-16 00:44:52,187] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-11-16 00:44:52,834] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z032.tif: [testng] [2024-11-16 00:44:53,457] [pool-1-thread-3] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-11-16 00:44:53,951] [pool-1-thread-6] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-11-16 00:44:54,306] [pool-1-thread-4] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-11-16 00:44:54,634] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-11-16 00:44:57,008] [pool-1-thread-2] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-11-16 00:44:59,309] [pool-1-thread-8] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] [2024-11-16 00:44:59,768] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-11-16 00:45:00,136] [pool-1-thread-7] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-11-16 00:45:00,476] [pool-1-thread-1] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-11-16 00:45:00,727] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-11-16 00:45:01,014] [pool-1-thread-4] Initializing /data/carolyn/tumor_4.tif: [testng] [2024-11-16 00:45:02,600] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-11-16 00:45:02,824] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-11-16 00:45:03,029] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-11-16 00:45:03,163] [pool-1-thread-11] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-11-16 00:45:04,298] [pool-1-thread-10] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-11-16 00:45:05,392] [pool-1-thread-5] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-11-16 00:45:05,589] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-11-16 00:45:05,777] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x32.tiff: [testng] [2024-11-16 00:45:05,923] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-11-16 00:45:06,073] [pool-1-thread-4] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] [2024-11-16 00:45:07,533] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-11-16 00:45:07,754] [pool-1-thread-3] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-11-16 00:45:08,128] [pool-1-thread-6] Initializing /data/josiah/cell-Z0.C0.tiff: [testng] [2024-11-16 00:45:08,674] [pool-1-thread-10] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-11-16 00:45:09,586] [pool-1-thread-9] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-11-16 00:45:09,825] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z026.tif: [testng] [2024-11-16 00:45:10,069] [pool-1-thread-5] Initializing /data/public/condensation/E4.pattern6.tif: [testng] [2024-11-16 00:45:10,291] [pool-1-thread-7] Initializing /data/ascb/FND-24_GeorgeEPalade.tif: [testng] [2024-11-16 00:45:10,459] [pool-1-thread-4] Initializing /data/damian/damian.tif: [testng] [2024-11-16 00:45:10,656] [pool-1-thread-1] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-11-16 00:45:12,658] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-11-16 00:45:13,340] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-11-16 00:45:13,701] [pool-1-thread-6] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-11-16 00:45:14,590] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0246.TIF: [testng] [2024-11-16 00:45:14,862] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] [2024-11-16 00:45:15,686] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-11-16 00:45:16,031] [pool-1-thread-1] Initializing /data/brian/datamanager.tiff: [testng] [2024-11-16 00:45:16,392] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z051.tif: [testng] [2024-11-16 00:45:17,029] [pool-1-thread-11] Initializing /data/qa-4968/twocars2.tif: [testng] [2024-11-16 00:45:17,419] [pool-1-thread-12] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 24 minutes 21 seconds Finished: SUCCESS