Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 32
originally caused by:
 Started by upstream project "Trigger" build number 36
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins10427174173616084257.sh
+ '[' olympus-oir = slidebook ']'
++ date +%u
+ '[' 6 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_4247_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 01:20:54,811 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:20:54,813 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service.
   [testng] 01:20:54,813 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:20:54,815 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:20:54,816 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:20:54,816 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:20:54,817 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:20:54,817 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:20:54,818 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:20:54,818 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:20:54,819 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:20:54,819 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:20:55,041 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:20:55,041 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:20:55,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:20:55,067 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:20:55,074 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:20:55,074 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:20:55,074 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:20:55,075 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:20:55,075 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration.
   [testng] 01:20:55,076 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point
   [testng] 01:20:55,076 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 258 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-04-13 01:20:55,087] [main] java.version = 11.0.16
   [testng] 01:20:55,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:20:55,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:20:55,152 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-13_01-20-55.log]
   [testng] 01:20:55,155 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration.
   [testng] [2024-04-13 01:20:55,158] [main] testng.directory = /data
   [testng] [2024-04-13 01:20:55,159] [main] testng.configDirectory = /config
   [testng] [2024-04-13 01:20:55,176] [main] testng.multiplier = 1.0
   [testng] [2024-04-13 01:20:55,178] [main] testng.in-memory = false
   [testng] [2024-04-13 01:20:55,179] [main] testng.allow-missing = false
   [testng] [2024-04-13 01:20:55,179] [main] user.language = en
   [testng] [2024-04-13 01:20:55,179] [main] user.country = ${user.country}
   [testng] [2024-04-13 01:20:55,179] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-04-13 01:21:08,843] [main] ----------------------------------------
   [testng] [2024-04-13 01:21:08,843] [main] Total files: 283
   [testng] [2024-04-13 01:21:08,843] [main] Scan time: 13.664 s (48 ms/file)
   [testng] [2024-04-13 01:21:08,843] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 186 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-04-13 01:29:44,293] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: 
   [testng] 01:29:44,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:29:44,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:44,296 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-13_01-29-44.log]
   [testng] 01:29:44,297 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49a21cf8 - End of configuration.
   [testng] [2024-04-13 01:29:45,119] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: 
   [testng] 01:29:45,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:29:45,119 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:45,120 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-13_01-29-45.log]
   [testng] 01:29:45,120 |-INFO in ch.qos.logback.core.sift.SiftProcessor@544ed1bb - End of configuration.
   [testng] [2024-04-13 01:29:45,209] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir: 
   [testng] 01:29:45,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:29:45,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:45,211 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-13_01-29-45.log]
   [testng] 01:29:45,212 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28f4ea7a - End of configuration.
   [testng] [2024-04-13 01:29:45,447] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif: 
   [testng] 01:29:45,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:29:45,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:45,448 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-13_01-29-45.log]
   [testng] 01:29:45,449 |-INFO in ch.qos.logback.core.sift.SiftProcessor@783f6ffc - End of configuration.
   [testng] [2024-04-13 01:29:45,559] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: 
   [testng] 01:29:45,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:29:45,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:45,561 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-13_01-29-45.log]
   [testng] 01:29:45,561 |-INFO in ch.qos.logback.core.sift.SiftProcessor@484afa22 - End of configuration.
   [testng] [2024-04-13 01:29:45,621] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: 
   [testng] 01:29:45,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:29:45,621 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:45,622 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-13_01-29-45.log]
   [testng] 01:29:45,623 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e04997b - End of configuration.
   [testng] [2024-04-13 01:29:45,713] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: 
   [testng] 01:29:45,714 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:29:45,714 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:45,714 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-13_01-29-45.log]
   [testng] 01:29:45,715 |-INFO in ch.qos.logback.core.sift.SiftProcessor@466cf65b - End of configuration.
   [testng] [2024-04-13 01:29:45,957] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif: 
   [testng] 01:29:45,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:29:45,957 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:45,957 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-13_01-29-45.log]
   [testng] 01:29:45,958 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b80663f - End of configuration.
   [testng] [2024-04-13 01:29:46,037] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: 
   [testng] 01:29:46,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:29:46,037 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:46,038 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-13_01-29-46.log]
   [testng] 01:29:46,039 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f317fb3 - End of configuration.
   [testng] [2024-04-13 01:29:46,136] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: 
   [testng] 01:29:46,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:29:46,136 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:46,137 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-13_01-29-46.log]
   [testng] 01:29:46,138 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d76d7ce - End of configuration.
   [testng] [2024-04-13 01:29:48,918] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: 
   [testng] 01:29:48,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:29:48,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:48,920 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-13_01-29-48.log]
   [testng] 01:29:48,920 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13654114 - End of configuration.
   [testng] [2024-04-13 01:29:49,024] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: 
   [testng] 01:29:49,024 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:29:49,024 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:29:49,025 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-13_01-29-49.log]
   [testng] 01:29:49,026 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29b20693 - End of configuration.
   [testng] [2024-04-13 01:29:52,974] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: 
   [testng] [2024-04-13 01:29:53,030] [pool-1-thread-10] Initializing /data/public/etienne/venus stack.ome.tif: 
   [testng] [2024-04-13 01:29:53,114] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: 
   [testng] [2024-04-13 01:29:53,158] [pool-1-thread-2] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: 
   [testng] [2024-04-13 01:29:53,832] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: 
   [testng] [2024-04-13 01:29:53,981] [pool-1-thread-7] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: 
   [testng] [2024-04-13 01:29:54,139] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: 
   [testng] [2024-04-13 01:29:54,217] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: 
   [testng] [2024-04-13 01:29:54,324] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: 
   [testng] [2024-04-13 01:29:54,862] [pool-1-thread-9] Initializing /data/public/etienne/amy slice z stack_0001.oir: 
   [testng] [2024-04-13 01:29:55,432] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: 
   [testng] [2024-04-13 01:29:56,187] [pool-1-thread-11] Initializing /data/olympus/calcium sparks_XYt.ome.tif: 
   [testng] [2024-04-13 01:29:56,951] [pool-1-thread-6] Initializing /data/qa-17919/f10187.oir: 
   [testng] [2024-04-13 01:30:15,914] [pool-1-thread-5] Initializing /data/public/etienne/venus stack.oir: 
   [testng] [2024-04-13 01:30:16,294] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: 
   [testng] [2024-04-13 01:30:16,347] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: 
   [testng] [2024-04-13 01:30:16,400] [pool-1-thread-12] Initializing /data/qa-17331/60x zstack RS.oir: 
   [testng] [2024-04-13 01:30:16,565] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: 
   [testng] [2024-04-13 01:30:16,645] [pool-1-thread-9] Initializing /data/qa-17331/60x zstack RS.ome.tif: 
   [testng] [2024-04-13 01:30:17,851] [pool-1-thread-2] Initializing /data/olympus/XYZt.vsi: 
   [testng] [2024-04-13 01:30:17,933] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: 
   [testng] [2024-04-13 01:30:18,109] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: 
   [testng] [2024-04-13 01:30:18,121] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: 
   [testng] [2024-04-13 01:30:18,503] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: 
   [testng] [2024-04-13 01:30:18,600] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir: 
   [testng] [2024-04-13 01:30:19,929] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: 
   [testng] [2024-04-13 01:30:20,242] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729.oir: 
   [testng] [2024-04-13 01:30:20,489] [pool-1-thread-9] Initializing /data/cudmore/20190401__0005.oir: 
   [testng] [2024-04-13 01:30:26,735] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: 
   [testng] [2024-04-13 01:30:26,929] [pool-1-thread-5] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: 
   [testng] [2024-04-13 01:30:27,193] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: 
   [testng] [2024-04-13 01:30:27,347] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: 
   [testng] [2024-04-13 01:30:27,627] [pool-1-thread-3] Initializing /data/qa-17270/stack1.ome.tif: 
   [testng] [2024-04-13 01:30:28,158] [pool-1-thread-7] Initializing /data/qa-17331/Clipboard.tif: 
   [testng] [2024-04-13 01:30:28,649] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: 
   [testng] [2024-04-13 01:30:29,376] [pool-1-thread-8] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: 
   [testng] [2024-04-13 01:30:29,637] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: 
   [testng] [2024-04-13 01:30:29,994] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: 
   [testng] [2024-04-13 01:30:30,323] [pool-1-thread-7] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: 
   [testng] [2024-04-13 01:30:30,860] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2.oir: 
   [testng] [2024-04-13 01:30:31,637] [pool-1-thread-11] Initializing /data/olympus/XYZt.ome.tif: 
   [testng] [2024-04-13 01:30:32,199] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: 
   [testng] [2024-04-13 01:30:32,456] [pool-1-thread-3] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: 
   [testng] [2024-04-13 01:30:35,409] [pool-1-thread-2] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: 
   [testng] [2024-04-13 01:30:35,871] [pool-1-thread-5] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: 
   [testng] [2024-04-13 01:30:35,959] [pool-1-thread-7] Initializing /data/olympus/XYZt.oir: 
   [testng] [2024-04-13 01:30:37,827] [pool-1-thread-10] Initializing /data/qa-17335/Clipboard-1.tif: 
   [testng] [2024-04-13 01:30:38,670] [pool-1-thread-8] Initializing /data/qa-16871/XY_0003.oir: 
   [testng] [2024-04-13 01:30:39,416] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.oir: 
   [testng] [2024-04-13 01:30:40,026] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: 
   [testng] [2024-04-13 01:30:40,102] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: 
   [testng] [2024-04-13 01:30:40,145] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: 
   [testng] [2024-04-13 01:30:40,284] [pool-1-thread-1] Initializing /data/qa-17270/alexa488.oir: 
   [testng] [2024-04-13 01:30:40,639] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: 
   [testng] [2024-04-13 01:30:41,145] [pool-1-thread-5] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: 
   [testng] [2024-04-13 01:30:41,642] [pool-1-thread-12] Initializing /data/qa-17270/image1.ome.tif: 
   [testng] [2024-04-13 01:30:41,717] [pool-1-thread-10] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: 
   [testng] [2024-04-13 01:30:41,786] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: 
   [testng] [2024-04-13 01:30:42,380] [pool-1-thread-8] Initializing /data/qa-17335/1.ome.tif: 
   [testng] [2024-04-13 01:30:42,761] [pool-1-thread-1] Initializing /data/qa-16881/P10-50 D2.ome.tif: 
   [testng] [2024-04-13 01:30:43,823] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: 
   [testng] [2024-04-13 01:30:44,133] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/zebra shg.oir: 
   [testng] [2024-04-13 01:30:52,240] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: 
   [testng] [2024-04-13 01:30:52,309] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.ome.tif: 
   [testng] [2024-04-13 01:30:52,367] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: 
   [testng] [2024-04-13 01:30:52,558] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: 
   [testng] [2024-04-13 01:30:53,363] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0019.oir: 
   [testng] [2024-04-13 01:30:53,825] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: 
   [testng] [2024-04-13 01:30:54,234] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: 
   [testng] [2024-04-13 01:30:54,536] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: 
   [testng] [2024-04-13 01:30:54,597] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-stack1.tif: 
   [testng] [2024-04-13 01:30:54,670] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: 
   [testng] [2024-04-13 01:30:55,147] [pool-1-thread-7] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: 
   [testng] [2024-04-13 01:30:55,713] [pool-1-thread-2] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: 
   [testng] [2024-04-13 01:30:55,861] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: 
   [testng] [2024-04-13 01:30:56,671] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: 
   [testng] [2024-04-13 01:30:56,752] [pool-1-thread-1] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: 
   [testng] [2024-04-13 01:30:57,291] [pool-1-thread-8] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: 
   [testng] [2024-04-13 01:31:00,456] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: 
   [testng] [2024-04-13 01:31:01,104] [pool-1-thread-2] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: 
   [testng] [2024-04-13 01:31:02,699] [pool-1-thread-5] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: 
   [testng] [2024-04-13 01:31:05,817] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: 
   [testng] [2024-04-13 01:31:13,839] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: 
   [testng] [2024-04-13 01:31:14,099] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: 
   [testng] [2024-04-13 01:31:14,185] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: 
   [testng] [2024-04-13 01:31:14,387] [pool-1-thread-12] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: 
   [testng] [2024-04-13 01:31:15,121] [pool-1-thread-2] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: 
   [testng] [2024-04-13 01:31:16,322] [pool-1-thread-9] Initializing /data/qa-17270/image1.oir: 
   [testng] [2024-04-13 01:31:16,640] [pool-1-thread-1] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: 
   [testng] [2024-04-13 01:31:16,707] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: 
   [testng] [2024-04-13 01:31:17,168] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: 
   [testng] [2024-04-13 01:31:17,594] [pool-1-thread-9] Initializing /data/olympus/calcium sparks_XYt.oir: 
   [testng] [2024-04-13 01:31:18,132] [pool-1-thread-8] Initializing /data/olympus/Stitched_XYZ.ome.tif: 
   [testng] [2024-04-13 01:31:18,596] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: 
   [testng] [2024-04-13 01:31:18,940] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-venus stack.tif: 
   [testng] [2024-04-13 01:31:19,137] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: 
   [testng] [2024-04-13 01:31:19,679] [pool-1-thread-7] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: 
   [testng] [2024-04-13 01:31:21,841] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: 
   [testng] [2024-04-13 01:31:22,125] [pool-1-thread-2] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: 
   [testng] [2024-04-13 01:33:51,210] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: 
   [testng] [2024-04-13 01:33:51,466] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: 
   [testng] [2024-04-13 01:33:51,899] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: 
   [testng] [2024-04-13 01:33:51,983] [pool-1-thread-5] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: 
   [testng] [2024-04-13 01:33:52,687] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: 
   [testng] [2024-04-13 01:33:53,455] [pool-1-thread-4] Initializing /data/qa-17922/example_multipart.oir: 
   [testng] [2024-04-13 01:34:17,956] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.vsi: 
   [testng] [2024-04-13 01:34:18,158] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: 
   [testng] [2024-04-13 01:34:18,228] [pool-1-thread-10] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: 
   [testng] [2024-04-13 01:34:18,272] [pool-1-thread-12] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: 
   [testng] [2024-04-13 01:34:18,579] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: 
   [testng] [2024-04-13 01:34:19,558] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: 
   [testng] [2024-04-13 01:34:20,155] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729_0024.oir: 
   [testng] [2024-04-13 01:34:20,581] [pool-1-thread-9] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: 
   [testng] [2024-04-13 01:34:20,864] [pool-1-thread-1] Initializing /data/qa-17335/stimulation_0001_LSM.oir: 
   [testng] [2024-04-13 01:34:21,250] [pool-1-thread-12] Initializing /data/olympus/40X_4CH_XY.ome.tif: 
   [testng] [2024-04-13 01:34:21,392] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: 
   [testng] [2024-04-13 01:34:22,382] [pool-1-thread-5] Initializing /data/qa-17917/f10010.oir: 
   [testng] [2024-04-13 01:34:53,143] [pool-1-thread-8] Initializing /data/qa-21508/Stitch_A01_G008.oir: 
   [testng] [2024-04-13 01:34:53,952] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: 
   [testng] [2024-04-13 01:34:54,568] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: 
   [testng] [2024-04-13 01:34:55,264] [pool-1-thread-9] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: 
   [testng] [2024-04-13 01:34:56,013] [pool-1-thread-10] Initializing /data/olympus/calcium sparks.jpg: 
   [testng] [2024-04-13 01:34:56,755] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/Clipboard.tif: 
   [testng] [2024-04-13 01:34:57,414] [pool-1-thread-9] Initializing /data/olympus/Stitched_XYZ.oir: 
   [testng] [2024-04-13 01:34:58,321] [pool-1-thread-3] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: 
   [testng] [2024-04-13 01:34:58,889] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: 
   [testng] [2024-04-13 01:34:59,566] [pool-1-thread-1] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: 
   [testng] [2024-04-13 01:35:00,963] [pool-1-thread-10] Initializing /data/qa-16871/Clipboard.tif: 
   [testng] [2024-04-13 01:35:01,165] [pool-1-thread-12] Initializing /data/qa-17409/Clipboard.tif: 
   [testng] [2024-04-13 01:35:01,502] [pool-1-thread-3] Initializing /data/qa-17409/Stitch_A01_G001.oir: 
   [testng] [2024-04-13 01:35:03,127] [pool-1-thread-11] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: 
   [testng] [2024-04-13 01:35:03,413] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: 
   [testng] [2024-04-13 01:35:03,888] [pool-1-thread-9] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: 
   [testng] [2024-04-13 01:35:04,201] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: 
   [testng] [2024-04-13 01:35:04,402] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: 
   [testng] [2024-04-13 01:35:06,102] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: 
   [testng] [2024-04-13 01:35:06,436] [pool-1-thread-12] Initializing /data/qa-17335/OSR-Z.oir: 
   [testng] [2024-04-13 01:35:06,584] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-image1.tif: 
   [testng] [2024-04-13 01:35:06,703] [pool-1-thread-1] Initializing /data/qa-17293/Clipboard.tif: 
   [testng] [2024-04-13 01:35:07,545] [pool-1-thread-12] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: 
   [testng] [2024-04-13 01:35:17,813] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: 
   [testng] [2024-04-13 01:35:17,978] [pool-1-thread-11] Initializing /data/public/etienne/coupe shg stack_0001.oir: 
   [testng] [2024-04-13 01:35:18,606] [pool-1-thread-1] Initializing /data/qa-17335/1.oir: 
   [testng] [2024-04-13 01:35:18,858] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: 
   [testng] [2024-04-13 01:35:19,639] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0006.oir: 
   [testng] [2024-04-13 01:35:20,108] [pool-1-thread-1] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: 
   [testng] [2024-04-13 01:35:20,268] [pool-1-thread-9] Initializing /data/olympus/40X_4CH_XY.vsi: 
   [testng] [2024-04-13 01:35:20,740] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: 
   [testng] [2024-04-13 01:35:21,422] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: 
   [testng] [2024-04-13 01:35:22,377] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: 
   [testng] [2024-04-13 01:35:22,741] [pool-1-thread-3] Initializing /data/olympus/Clipboard-XYZt.tif: 
   [testng] [2024-04-13 01:35:22,930] [pool-1-thread-9] Initializing /data/qa-16871/XY_0003.ome.tif: 
   [testng] [2024-04-13 01:35:23,026] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-alexa488.tif: 
   [testng] [2024-04-13 01:35:23,491] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: 
   [testng] [2024-04-13 01:35:24,027] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: 
   [testng] [2024-04-13 01:35:24,260] [pool-1-thread-3] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: 
   [testng] [2024-04-13 01:35:24,482] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: 
   [testng] [2024-04-13 01:35:25,178] [pool-1-thread-1] Initializing /data/olympus/spectral_scan_XYL.ome.tif: 
   [testng] [2024-04-13 01:35:25,883] [pool-1-thread-3] Initializing /data/olympus/2017-04-20/Clipboard.tif: 
   [testng] [2024-04-13 01:35:26,102] [pool-1-thread-9] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: 
   [testng] [2024-04-13 01:35:26,831] [pool-1-thread-1] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: 
   [testng] [2024-04-13 01:35:27,360] [pool-1-thread-9] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: 
   [testng] [2024-04-13 01:35:27,626] [pool-1-thread-3] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: 
   [testng] [2024-04-13 01:35:28,012] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: 
   [testng] [2024-04-13 01:35:28,069] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: 
   [testng] [2024-04-13 01:35:29,399] [pool-1-thread-12] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: 
   [testng] [2024-04-13 01:35:29,736] [pool-1-thread-8] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: 
   [testng] [2024-04-13 01:35:30,316] [pool-1-thread-1] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: 
   [testng] [2024-04-13 01:35:30,641] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: 
   [testng] [2024-04-13 01:35:31,295] [pool-1-thread-3] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: 
   [testng] [2024-04-13 01:36:25,357] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: 
   [testng] [2024-04-13 01:36:25,996] [pool-1-thread-6] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: 
   [testng] [2024-04-13 01:36:26,075] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: 
   [testng] [2024-04-13 01:36:26,184] [pool-1-thread-8] Initializing /data/olympus/spectral_scan_XYL.oir: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 9858, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 50 minutes 16 seconds
Finished: SUCCESS