Started by upstream project "BIOFORMATS-test-repo" build number 287 originally caused by: Started by upstream project "Trigger" build number 306 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins15675794679044231357.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_45269_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:21:17,601 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:21:17,602 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 00:21:17,602 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:17,603 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:21:17,604 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:21:17,604 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:21:17,604 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:21:17,604 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:17,605 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:21:17,605 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:21:17,605 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:21:17,606 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:21:17,777 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:21:17,777 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:21:17,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:21:17,798 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:21:17,804 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:21:17,804 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:21:17,804 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:21:17,804 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:21:17,805 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 00:21:17,805 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 00:21:17,805 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 200 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-11 00:21:17,814] [main] java.version = 17.0.2 [testng] 00:21:17,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:21:17,817 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:21:17,857 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-11_00-21-17.log] [testng] 00:21:17,858 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-12-11 00:21:17,860] [main] testng.directory = /data [testng] [2024-12-11 00:21:17,860] [main] testng.configDirectory = /config [testng] [2024-12-11 00:21:17,869] [main] testng.multiplier = 1.0 [testng] [2024-12-11 00:21:17,870] [main] testng.in-memory = false [testng] [2024-12-11 00:21:17,870] [main] testng.allow-missing = false [testng] [2024-12-11 00:21:17,870] [main] user.language = en [testng] [2024-12-11 00:21:17,870] [main] user.country = ${user.country} [testng] [2024-12-11 00:21:17,870] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-11 00:22:21,627] [main] ---------------------------------------- [testng] [2024-12-11 00:22:21,628] [main] Total files: 4426 [testng] [2024-12-11 00:22:21,628] [main] Scan time: 63.757 s (14 ms/file) [testng] [2024-12-11 00:22:21,628] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-11 00:46:00,508] [pool-1-thread-1] Initializing /data/wayne/apple.tif: [testng] 00:46:00,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:46:00,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:00,511 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-11_00-46-00.log] [testng] 00:46:00,511 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f445546 - End of configuration. [testng] [2024-12-11 00:46:03,439] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z060.tif: [testng] 00:46:03,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:46:03,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:03,440 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-11_00-46-03.log] [testng] 00:46:03,441 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ce73149 - End of configuration. [testng] [2024-12-11 00:46:05,199] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z033.tif: [testng] 00:46:05,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:46:05,199 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:05,199 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-11_00-46-05.log] [testng] 00:46:05,200 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57426f53 - End of configuration. [testng] [2024-12-11 00:46:07,409] [pool-1-thread-10] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] 00:46:07,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:46:07,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:07,410 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-11_00-46-07.log] [testng] 00:46:07,411 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65399f6b - End of configuration. [testng] [2024-12-11 00:46:09,325] [pool-1-thread-9] Initializing /data/curtis/test1.tiff: [testng] 00:46:09,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:46:09,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:09,326 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-11_00-46-09.log] [testng] 00:46:09,326 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79548bee - End of configuration. [testng] [2024-12-11 00:46:11,510] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z005.tif: [testng] 00:46:11,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:46:11,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:11,511 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-11_00-46-11.log] [testng] 00:46:11,511 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bd9fc94 - End of configuration. [testng] [2024-12-11 00:46:14,115] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x32.tiff: [testng] 00:46:14,115 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:46:14,115 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:14,115 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-11_00-46-14.log] [testng] 00:46:14,116 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6fe6d3bf - End of configuration. [testng] [2024-12-11 00:46:15,960] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] 00:46:15,960 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:46:15,960 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:15,961 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-11_00-46-15.log] [testng] 00:46:15,961 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56761f6e - End of configuration. [testng] [2024-12-11 00:46:17,717] [pool-1-thread-5] Initializing /data/ascb/CYT-35_FriendOsmiumEpididymis_4800.tif: [testng] 00:46:17,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:46:17,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:17,718 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-11_00-46-17.log] [testng] 00:46:17,718 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3685f1a1 - End of configuration. [testng] [2024-12-11 00:46:19,938] [pool-1-thread-4] Initializing /data/josiah/cell-Z34.C0.tiff: [testng] 00:46:19,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:46:19,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:19,939 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-11_00-46-19.log] [testng] 00:46:19,939 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25fb04a5 - End of configuration. [testng] [2024-12-11 00:46:21,998] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z034.tif: [testng] 00:46:21,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:46:21,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:21,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-11_00-46-21.log] [testng] 00:46:21,999 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e9346c8 - End of configuration. [testng] [2024-12-11 00:46:23,924] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] 00:46:23,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:46:23,924 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:46:23,925 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-11_00-46-23.log] [testng] 00:46:23,925 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d690913 - End of configuration. [testng] [2024-12-11 00:46:38,994] [pool-1-thread-9] Initializing /data/public/condensation/E4.pattern5.tif: [testng] [2024-12-11 00:46:41,294] [pool-1-thread-7] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-12-11 00:46:42,671] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x32.tiff: [testng] [2024-12-11 00:46:44,621] [pool-1-thread-4] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-12-11 00:46:47,129] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-12-11 00:46:48,863] [pool-1-thread-2] Initializing /data/michael/WonkyTrafficLight.tiff: [testng] [2024-12-11 00:46:50,486] [pool-1-thread-11] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-12-11 00:47:06,938] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] [2024-12-11 00:47:08,715] [pool-1-thread-8] Initializing /data/josiah/cell-Z28.C0.tiff: [testng] [2024-12-11 00:47:11,142] [pool-1-thread-6] Initializing /data/curtis/imagesEight.tiff: [testng] [2024-12-11 00:47:13,369] [pool-1-thread-10] Initializing /data/martin/head.tif: [testng] [2024-12-11 00:47:14,982] [pool-1-thread-5] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-12-11 00:47:26,352] [pool-1-thread-7] Initializing /data/samples/melissa/imagej-last-ifd/Rat_Hippocampal_Neuron.tif: [testng] [2024-12-11 00:47:31,635] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z015.tif: [testng] [2024-12-11 00:47:33,801] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-12-11 00:47:35,237] [pool-1-thread-12] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-12-11 00:47:36,581] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] [2024-12-11 00:47:38,049] [pool-1-thread-9] Initializing /data/kevino/_BF_00004.tif: [testng] [2024-12-11 00:47:39,811] [pool-1-thread-2] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-12-11 00:47:41,237] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-12-11 00:47:42,886] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-12-11 00:47:44,572] [pool-1-thread-8] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-12-11 00:47:51,209] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-12-11 00:48:01,328] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z017.tif: [testng] [2024-12-11 00:48:04,015] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-12-11 00:48:05,348] [pool-1-thread-4] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-12-11 00:48:06,332] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-02.tiff: [testng] [2024-12-11 00:48:07,602] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-12-11 00:48:08,352] [pool-1-thread-6] Initializing /data/qa-4745/LIBPB476_Figure 1_H_NA_21879.tiff: [testng] [2024-12-11 00:48:09,042] [pool-1-thread-2] Initializing /data/marc/ball48_original_10x.tif: [testng] [2024-12-11 00:48:09,327] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP8.tiff: [testng] [2024-12-11 00:48:10,136] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z043.tif: [testng] [2024-12-11 00:48:10,952] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-12-11 00:48:18,888] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-12-11 00:48:20,659] [pool-1-thread-7] Initializing /data/public/condensation/A1.pattern2.tif: [testng] [2024-12-11 00:48:23,630] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z045.tif: [testng] [2024-12-11 00:48:25,048] [pool-1-thread-9] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-12-11 00:48:26,039] [pool-1-thread-1] Initializing /data/josiah/cell-Z36.C1.tiff: [testng] [2024-12-11 00:48:26,960] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-12-11 00:48:27,934] [pool-1-thread-10] Initializing /data/brian/Ch1_fld1.tif: [testng] [2024-12-11 00:48:28,960] [pool-1-thread-12] Initializing /data/josiah/cell-Z5.C1.tiff: [testng] [2024-12-11 00:48:30,160] [pool-1-thread-4] Initializing /data/josh/NESb_C2_TP10.tiff: [testng] [2024-12-11 00:48:31,082] [pool-1-thread-6] Initializing /data/boguslaw/Arabidopsis_large.tif: [testng] [2024-12-11 00:48:31,977] [pool-1-thread-11] Initializing /data/samples/cielab/Ski_TC8-03_ROMM_lab.tif: [testng] [2024-12-11 00:48:39,654] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x64.tiff: [testng] 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[2024-12-11 01:06:47,206] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-12-11 01:06:49,454] [pool-1-thread-8] Initializing /data/public/condensation/C4.pattern2.tif: [testng] [2024-12-11 01:06:51,286] [pool-1-thread-6] Initializing /data/public/condensation/B12.pattern5.tif: [testng] [2024-12-11 01:06:53,645] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs012.TIF: [testng] [2024-12-11 01:06:55,353] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-12-11 01:07:02,829] [pool-1-thread-12] Initializing /data/kevino/_BF_00002.tif: [testng] [2024-12-11 01:07:05,366] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-12-11 01:07:09,120] [pool-1-thread-4] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-12-11 01:07:11,195] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z018.tif: [testng] [2024-12-11 01:07:17,116] 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01:08:39,099] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0254.TIF: [testng] [2024-12-11 01:08:48,158] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-12-11 01:08:53,099] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-12-11 01:08:56,181] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [2024-12-11 01:08:59,255] [pool-1-thread-6] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-12-11 01:09:00,840] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0206.TIF: [testng] [2024-12-11 01:09:02,512] [pool-1-thread-3] Initializing /data/public/condensation/E4.pattern8.tif: [testng] [2024-12-11 01:09:04,259] [pool-1-thread-9] Initializing /data/public/libtiff/jim___ah.tif: [testng] [2024-12-11 01:09:05,800] [pool-1-thread-8] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-12-11 01:09:07,790] [pool-1-thread-7] Initializing 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/data/ascb/FND-22_FawcettLongitudinalMammalian_4800.tif: [testng] [2024-12-11 01:10:54,298] [pool-1-thread-9] Initializing /data/kevino/_BF_00005.tif: [testng] [2024-12-11 01:10:56,950] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z033.tif: [testng] [2024-12-11 01:10:59,198] [pool-1-thread-7] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-12-11 01:11:01,142] [pool-1-thread-5] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-12-11 01:11:03,116] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z006.tif: [testng] [2024-12-11 01:11:04,762] [pool-1-thread-3] Initializing /data/ascb/FND-26_PaladeGlycogen_4800.tif: [testng] [2024-12-11 01:11:06,392] [pool-1-thread-4] Initializing /data/curtis/map/the-quick: [testng] [2024-12-11 01:11:09,245] [pool-1-thread-1] Initializing /data/ascb/CYT-50_FriendSecretoryPairA_4800.tif: [testng] [2024-12-11 01:11:11,648] [pool-1-thread-11] Initializing /data/josiah/cell-Z30.C1.tiff: [testng] [2024-12-11 01:11:22,320] [pool-1-thread-10] Initializing /data/damian/12m.tiff: [testng] [2024-12-11 01:11:25,965] [pool-1-thread-4] Initializing /data/public/libtiff/cramps-tile.tif: [testng] [2024-12-11 01:11:28,472] [pool-1-thread-2] Initializing /data/brian/Alx-488-pk.tif: [testng] [2024-12-11 01:11:30,454] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x32.tiff: [testng] [2024-12-11 01:11:32,324] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z019.tif: [testng] [2024-12-11 01:11:33,885] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x48.tiff: [testng] [2024-12-11 01:11:35,607] [pool-1-thread-9] Initializing /data/edward/TestDoc2.tif: [testng] [2024-12-11 01:11:38,182] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-12-11 01:11:39,780] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z001.tif: [testng] [2024-12-11 01:11:42,063] [pool-1-thread-3] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-12-11 01:11:44,200] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-12-11 01:11:47,272] [pool-1-thread-1] Initializing /data/boguslaw/Arabidopsis.tiff: [testng] [2024-12-11 01:11:55,584] [pool-1-thread-10] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-12-11 01:11:57,805] [pool-1-thread-12] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-12-11 01:11:59,779] [pool-1-thread-5] Initializing /data/wayne/screen-rgb.tiff: [testng] [2024-12-11 01:12:01,776] [pool-1-thread-7] Initializing /data/josiah/cell-Z4.C1.tiff: [testng] [2024-12-11 01:12:03,554] [pool-1-thread-2] Initializing /data/josiah/cell-Z15.C0.tiff: [testng] [2024-12-11 01:12:05,302] [pool-1-thread-6] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-12-11 01:12:07,475] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z044.tif: [testng] [2024-12-11 01:12:09,365] [pool-1-thread-11] Initializing /data/josiah/cell-Z26.C0.tiff: [testng] [2024-12-11 01:12:10,921] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-12-11 01:12:12,999] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] [2024-12-11 01:12:20,825] [pool-1-thread-1] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-12-11 01:12:22,513] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x16.tiff: [testng] [2024-12-11 01:12:27,625] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-12-11 01:12:31,915] [pool-1-thread-4] Initializing /data/samples/melissa/imagej-4gb/4gb-test&sizeX=1024&sizeY=1024&pixelType=uint16&sizeC=2050.fake: [testng] [2024-12-11 01:12:32,558] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] [2024-12-11 01:12:36,781] [pool-1-thread-3] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-12-11 01:12:39,146] [pool-1-thread-11] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-12-11 01:12:40,585] [pool-1-thread-8] Initializing /data/josh/NESb_C2_TP4.tiff: [testng] [2024-12-11 01:12:42,216] [pool-1-thread-7] Initializing /data/kevino/_BF_00001.tif: [testng] [2024-12-11 01:12:43,739] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-12-11 01:12:45,143] [pool-1-thread-12] Initializing /data/josiah/cell-Z19.C0.tiff: [testng] [2024-12-11 01:12:49,321] [pool-1-thread-9] Initializing /data/josiah/cell-Z2.C0.tiff: [testng] [2024-12-11 01:12:57,497] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-12-11 01:12:59,197] [pool-1-thread-1] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-12-11 01:13:01,455] [pool-1-thread-2] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-12-11 01:13:04,010] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z036.tif: [testng] [2024-12-11 01:13:06,921] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z025.tif: [testng] [2024-12-11 01:13:09,757] [pool-1-thread-8] Initializing /data/samples/melissa/long8-subfiletype/Cell_Colony.tif: [testng] [2024-12-11 01:13:11,540] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x48.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 52 minutes 12 seconds Finished: SUCCESS