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Started by upstream project "BIOFORMATS-test-repo" build number 302 originally caused by: Started by upstream project "Trigger" build number 324 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins15586286420757246587.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_47857_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 04:46:31,119 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 04:46:31,120 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 04:46:31,120 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:46:31,121 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:46:31,122 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:46:31,122 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:46:31,122 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:46:31,122 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:46:31,123 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:46:31,123 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:46:31,123 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:46:31,124 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:46:31,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:46:31,284 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:46:31,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:46:31,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:46:31,311 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:46:31,311 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:46:31,311 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:46:31,311 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:46:31,311 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 04:46:31,312 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 04:46:31,312 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 189 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-12-29 04:46:31,320] [main] java.version = 17.0.2 [testng] 04:46:31,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:46:31,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:46:31,362 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-29_04-46-31.log] [testng] 04:46:31,363 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-12-29 04:46:31,365] [main] testng.directory = /data [testng] [2024-12-29 04:46:31,365] [main] testng.configDirectory = /config [testng] [2024-12-29 04:46:31,373] [main] testng.multiplier = 1.0 [testng] [2024-12-29 04:46:31,374] [main] testng.in-memory = false [testng] [2024-12-29 04:46:31,374] [main] testng.allow-missing = false [testng] [2024-12-29 04:46:31,374] [main] user.language = en [testng] [2024-12-29 04:46:31,374] [main] user.country = ${user.country} [testng] [2024-12-29 04:46:31,374] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-12-29 04:49:11,183] [main] ---------------------------------------- [testng] [2024-12-29 04:49:11,184] [main] Total files: 15735 [testng] [2024-12-29 04:49:11,184] [main] Scan time: 159.808 s (10 ms/file) [testng] [2024-12-29 04:49:11,184] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-12-29 04:53:26,049] [pool-1-thread-1] Initializing /data/converted/stephan/notok1.tif: [testng] 04:53:26,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:53:26,050 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:26,051 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-12-29_04-53-26.log] [testng] 04:53:26,051 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4122587e - End of configuration. [testng] [2024-12-29 04:53:27,083] [pool-1-thread-12] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] 04:53:27,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:53:27,083 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:27,084 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-12-29_04-53-27.log] [testng] 04:53:27,084 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5826b99d - End of configuration. [testng] [2024-12-29 04:53:28,096] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] 04:53:28,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:53:28,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:28,097 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-12-29_04-53-28.log] [testng] 04:53:28,098 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d9ce27a - End of configuration. [testng] [2024-12-29 04:53:29,366] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] 04:53:29,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:53:29,366 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:29,367 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-12-29_04-53-29.log] [testng] 04:53:29,367 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cff9634 - End of configuration. [testng] [2024-12-29 04:53:31,592] [pool-1-thread-9] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] 04:53:31,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:53:31,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:31,593 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-12-29_04-53-31.log] [testng] 04:53:31,593 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f993f61 - End of configuration. [testng] [2024-12-29 04:53:34,188] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] 04:53:34,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:53:34,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:34,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-12-29_04-53-34.log] [testng] 04:53:34,189 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64e02fbd - End of configuration. [testng] [2024-12-29 04:53:35,894] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] 04:53:35,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:53:35,895 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:35,895 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-12-29_04-53-35.log] [testng] 04:53:35,896 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fce121a - End of configuration. [testng] [2024-12-29 04:53:38,226] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] 04:53:38,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:53:38,226 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:38,227 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-29_04-53-38.log] [testng] 04:53:38,227 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a5e8923 - End of configuration. [testng] [2024-12-29 04:53:39,469] [pool-1-thread-5] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] 04:53:39,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:53:39,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:39,470 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-12-29_04-53-39.log] [testng] 04:53:39,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dd6ce2c - End of configuration. [testng] [2024-12-29 04:53:40,808] [pool-1-thread-4] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 04:53:40,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:53:40,808 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:40,809 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-12-29_04-53-40.log] [testng] 04:53:40,810 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31025931 - End of configuration. [testng] [2024-12-29 04:53:42,190] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] 04:53:42,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:53:42,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:42,191 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-12-29_04-53-42.log] [testng] 04:53:42,191 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a54c414 - End of configuration. [testng] [2024-12-29 04:53:43,790] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] 04:53:43,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:53:43,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:53:43,791 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-29_04-53-43.log] [testng] 04:53:43,791 |-INFO in ch.qos.logback.core.sift.SiftProcessor@380d56d8 - End of configuration. [testng] [2024-12-29 04:54:16,022] [pool-1-thread-12] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-12-29 04:54:27,640] [pool-1-thread-4] Initializing /data/scott/Slide133-11.tif: [testng] [2024-12-29 04:54:29,615] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-12-29 04:54:45,979] [pool-1-thread-8] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2024-12-29 04:54:52,586] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-12-29 04:55:05,350] [pool-1-thread-4] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-12-29 04:55:13,261] [pool-1-thread-6] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-12-29 04:55:37,595] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-12-29 04:55:57,836] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-12-29 04:57:00,915] [pool-1-thread-5] Initializing /data/converted/dietmar/137.tif: [testng] [2024-12-29 04:57:16,376] [pool-1-thread-6] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-12-29 04:58:44,825] [pool-1-thread-8] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-12-29 04:59:36,524] [pool-1-thread-8] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-12-29 05:00:43,757] [pool-1-thread-8] Initializing /data/converted/dietmar/138.tif: [testng] [2024-12-29 05:03:44,432] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-12-29 05:04:15,330] [pool-1-thread-10] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-12-29 05:05:19,036] [pool-1-thread-2] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-12-29 05:05:40,595] [pool-1-thread-7] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-12-29 05:06:21,421] [pool-1-thread-12] Initializing /data/converted/michel/d.tif: [testng] [2024-12-29 05:07:13,081] [pool-1-thread-12] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-12-29 05:07:53,247] [pool-1-thread-12] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-12-29 05:08:43,323] [pool-1-thread-12] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-12-29 05:09:21,868] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-12-29 05:09:27,415] [pool-1-thread-12] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-12-29 05:09:51,164] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-12-29 05:09:57,323] [pool-1-thread-4] Initializing /data/converted/converted/damian.tif: [testng] [2024-12-29 05:10:34,583] [pool-1-thread-4] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-12-29 05:10:43,472] [pool-1-thread-11] Initializing /data/converted/michel/e.tif: [testng] [2024-12-29 05:11:33,637] [pool-1-thread-7] Initializing /data/scott/Slide133-08.tif: [testng] [2024-12-29 05:12:09,673] [pool-1-thread-11] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-12-29 05:12:17,968] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-12-29 05:12:33,496] [pool-1-thread-1] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-12-29 05:12:59,159] [pool-1-thread-8] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-12-29 05:13:28,634] [pool-1-thread-11] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-12-29 05:14:38,206] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-12-29 05:15:21,031] [pool-1-thread-1] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-12-29 05:16:14,542] [pool-1-thread-8] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-12-29 05:16:41,326] [pool-1-thread-1] Initializing /data/scott/Slide133-01.tif: [testng] [2024-12-29 05:17:05,155] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-12-29 05:17:23,964] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-12-29 05:17:45,705] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-12-29 05:18:12,714] [pool-1-thread-12] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-12-29 05:18:55,949] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2024-12-29 05:19:29,307] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-12-29 05:19:57,859] [pool-1-thread-10] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-12-29 05:20:45,780] [pool-1-thread-3] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-12-29 05:21:29,826] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-12-29 05:21:52,698] [pool-1-thread-3] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-12-29 05:22:48,122] [pool-1-thread-7] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-12-29 05:22:56,986] [pool-1-thread-6] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-12-29 05:23:33,121] [pool-1-thread-7] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-12-29 05:23:39,405] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-12-29 05:24:17,568] [pool-1-thread-7] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-12-29 05:24:42,096] [pool-1-thread-4] Initializing /data/converted/converted/2chz.tif: [testng] [2024-12-29 05:24:59,333] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-12-29 05:27:09,269] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-12-29 05:28:50,349] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-12-29 05:29:25,103] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif: [testng] [2024-12-29 05:30:33,985] [pool-1-thread-3] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-12-29 05:31:13,261] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-12-29 05:31:15,465] [pool-1-thread-7] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-12-29 05:31:46,225] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-12-29 05:32:18,915] [pool-1-thread-7] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-12-29 05:32:46,308] [pool-1-thread-6] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-12-29 05:33:01,583] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-12-29 05:35:29,090] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-12-29 05:36:54,989] [pool-1-thread-10] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-12-29 05:40:18,091] [pool-1-thread-11] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-12-29 05:45:43,213] [pool-1-thread-8] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-12-29 05:46:20,416] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-12-29 05:51:14,540] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-12-29 05:51:18,364] [pool-1-thread-7] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-12-29 05:51:47,218] [pool-1-thread-12] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-12-29 05:52:31,080] [pool-1-thread-8] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-12-29 05:53:49,397] [pool-1-thread-8] Initializing /data/scott/Slide133-04.tif: [testng] [2024-12-29 05:54:39,064] [pool-1-thread-8] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-12-29 05:54:56,954] [pool-1-thread-7] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-12-29 05:56:03,261] [pool-1-thread-7] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-12-29 05:57:33,498] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-12-29 05:59:27,734] [pool-1-thread-3] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-12-29 06:02:24,958] [pool-1-thread-9] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-12-29 06:02:57,648] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-12-29 06:03:59,341] [pool-1-thread-8] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-12-29 06:04:31,064] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-12-29 06:07:50,732] [pool-1-thread-4] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-12-29 06:09:59,685] [pool-1-thread-4] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-12-29 06:11:06,438] [pool-1-thread-4] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-12-29 06:11:43,911] [pool-1-thread-4] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-12-29 06:12:20,145] [pool-1-thread-4] Initializing /data/converted/sebastien/test.tif: [testng] [2024-12-29 06:13:33,182] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-12-29 06:14:43,683] [pool-1-thread-11] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-12-29 06:17:00,978] [pool-1-thread-3] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-12-29 06:17:13,085] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-12-29 06:17:33,119] [pool-1-thread-3] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-12-29 06:19:07,862] [pool-1-thread-5] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-12-29 06:21:07,561] [pool-1-thread-3] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-12-29 06:21:51,567] [pool-1-thread-3] Initializing /data/converted/michel/b.tif: [testng] [2024-12-29 06:22:26,107] [pool-1-thread-9] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-12-29 06:22:38,865] [pool-1-thread-3] Initializing /data/converted/nicolas/image.tif: [testng] [2024-12-29 06:23:10,011] [pool-1-thread-3] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-12-29 06:23:50,566] [pool-1-thread-11] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-12-29 06:24:04,127] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-12-29 06:24:08,973] [pool-1-thread-7] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-12-29 06:24:31,233] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-12-29 06:25:03,885] [pool-1-thread-7] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-12-29 06:25:12,231] [pool-1-thread-4] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-12-29 06:25:46,193] [pool-1-thread-4] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-12-29 06:25:49,038] [pool-1-thread-7] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-12-29 06:26:34,492] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-12-29 06:29:43,068] [pool-1-thread-1] Initializing /data/converted/michel/c.tif: [testng] [2024-12-29 06:30:39,411] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-12-29 06:31:18,061] [pool-1-thread-1] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-12-29 06:31:25,187] [pool-1-thread-7] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] 06:36:45,217 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 06:36:45,217 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:36:45,218 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-12-29_06-36-45.log] [testng] 06:36:45,219 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2dbe743d - End of configuration. [testng] 07:26:24,249 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 07:26:24,249 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:26:24,251 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-12-29_07-26-24.log] [testng] 07:26:24,252 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30abcb2e - End of configuration. [testng] 07:29:30,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 07:29:30,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:29:30,705 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-12-29_07-29-30.log] [testng] 07:29:30,705 |-INFO in ch.qos.logback.core.sift.SiftProcessor@445760e0 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 163 minutes 5 seconds Finished: SUCCESS