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Started by upstream project "BIOFORMATS-test-repo" build number 362 originally caused by: Started by upstream project "Trigger" build number 388 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins7592660543181406864.sh + '[' metamorph = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_57718_merge_ci -v /uod/idr/repos/curated/metamorph:/data -v /uod/idr-scratch/merge-ci/curated/metamorph:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:41:43,361 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 01:41:43,363 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service. [testng] 01:41:43,363 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:41:43,364 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:41:43,364 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:41:43,365 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:41:43,365 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:41:43,365 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:41:43,365 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:41:43,366 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:41:43,367 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:41:43,367 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:41:43,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:41:43,553 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:41:43,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:41:43,578 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:41:43,584 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:41:43,584 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:41:43,584 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:41:43,584 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:41:43,584 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration. [testng] 01:41:43,585 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point [testng] 01:41:43,585 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 220 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-02 01:41:43,595] [main] java.version = 17.0.2 [testng] 01:41:43,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:41:43,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:43,644 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-02_01-41-43.log] [testng] 01:41:43,646 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration. [testng] [2025-03-02 01:41:43,648] [main] testng.directory = /data [testng] [2025-03-02 01:41:43,648] [main] testng.configDirectory = /config [testng] [2025-03-02 01:41:43,657] [main] testng.multiplier = 1.0 [testng] [2025-03-02 01:41:43,658] [main] testng.in-memory = false [testng] [2025-03-02 01:41:43,658] [main] testng.allow-missing = false [testng] [2025-03-02 01:41:43,658] [main] user.language = en [testng] [2025-03-02 01:41:43,658] [main] user.country = ${user.country} [testng] [2025-03-02 01:41:43,658] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-02 01:56:44,364] [main] ---------------------------------------- [testng] [2025-03-02 01:56:44,364] [main] Total files: 14121 [testng] [2025-03-02 01:56:44,365] [main] Scan time: 900.706 s (63 ms/file) [testng] [2025-03-02 01:56:44,365] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 261 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-02 02:18:07,311] [pool-1-thread-1] Initializing /data/qa-30870/220209_posit5.tif: [testng] 02:18:07,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:18:07,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:07,313 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-02_02-18-07.log] [testng] 02:18:07,313 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a02a6fd - End of configuration. [testng] [2025-03-02 02:18:08,123] [pool-1-thread-12] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w2Filter FITC.TIF: [testng] 02:18:08,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:18:08,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:08,124 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-02_02-18-08.log] [testng] 02:18:08,125 |-INFO in ch.qos.logback.core.sift.SiftProcessor@635c5e5d - End of configuration. [testng] [2025-03-02 02:18:08,846] [pool-1-thread-11] Initializing /data/jmuhlich/rgb_w1_s1_t1.TIF: [testng] 02:18:08,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:18:08,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:08,847 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-02_02-18-08.log] [testng] 02:18:08,848 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fb86c3a - End of configuration. [testng] [2025-03-02 02:18:09,592] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w3Filter TRITC.TIF: [testng] 02:18:09,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:18:09,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:09,593 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-02_02-18-09.log] [testng] 02:18:09,593 |-INFO in ch.qos.logback.core.sift.SiftProcessor@612450ed - End of configuration. [testng] [2025-03-02 02:18:10,231] [pool-1-thread-9] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_4well/Dish3_w1FRET_s1_t1.TIF: [testng] 02:18:10,231 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:18:10,231 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:10,232 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-02_02-18-10.log] [testng] 02:18:10,232 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d2ea886 - End of configuration. [testng] [2025-03-02 02:18:15,802] [pool-1-thread-8] Initializing /data/bill/OX218B3/OX218B3_w1488nm- 30-_t1.STK: [testng] 02:18:15,802 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:18:15,802 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:15,803 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-02_02-18-15.log] [testng] 02:18:15,803 |-INFO in ch.qos.logback.core.sift.SiftProcessor@788e3da2 - End of configuration. [testng] [2025-03-02 02:18:17,255] [pool-1-thread-7] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t2.TIF: [testng] 02:18:17,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:18:17,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:17,256 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-02_02-18-17.log] [testng] 02:18:17,256 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52995754 - End of configuration. [testng] [2025-03-02 02:18:18,400] [pool-1-thread-7] Used files list does not include base file [testng] [2025-03-02 02:18:18,402] [pool-1-thread-6] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: [testng] 02:18:18,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:18:18,402 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:18,403 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-02_02-18-18.log] [testng] 02:18:18,403 |-INFO in ch.qos.logback.core.sift.SiftProcessor@19ba9ece - End of configuration. [testng] [2025-03-02 02:18:20,940] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_4well/Dish5_w1FRET_s1_t1.TIF: [testng] 02:18:20,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:18:20,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:20,941 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-02_02-18-20.log] [testng] 02:18:20,941 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14f6afd2 - End of configuration. [testng] [2025-03-02 02:18:24,479] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t1.TIF: [testng] 02:18:24,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:18:24,479 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:24,480 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-02_02-18-24.log] [testng] 02:18:24,480 |-INFO in ch.qos.logback.core.sift.SiftProcessor@314bb494 - End of configuration. [testng] [2025-03-02 02:18:25,608] [pool-1-thread-4] Used files list does not include base file [testng] [2025-03-02 02:18:25,610] [pool-1-thread-3] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w2Laser4914BD4BP_OverView.tif: [testng] 02:18:25,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:18:25,611 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:25,611 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-02_02-18-25.log] [testng] 02:18:25,612 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21f04747 - End of configuration. [testng] [2025-03-02 02:18:26,284] [pool-1-thread-3] Used files list does not include base file [testng] [2025-03-02 02:18:26,286] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine-2.tif: [testng] 02:18:26,286 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:18:26,286 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:26,287 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-02_02-18-26.log] [testng] 02:18:26,287 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3cca1731 - End of configuration. [testng] [2025-03-02 02:18:36,711] [pool-1-thread-2] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211115_Vec_ISOto5HT_35mmdish/HCl/Dish2_w1FRET_t1.TIF: [testng] [2025-03-02 02:18:39,444] [pool-1-thread-10] Initializing /data/grant/XYZCT_Image_w1FITC_t1.STK: [testng] [2025-03-02 02:18:40,503] [pool-1-thread-12] Initializing /data/chris/test2_w2_s1_t1.stk: [testng] [2025-03-02 02:18:41,444] [pool-1-thread-1] Initializing /data/chris/exp1_w2CSU RED_s3_t002.stk: [testng] [2025-03-02 02:18:46,502] [pool-1-thread-11] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211111_Vec_ISOto5HT_35mmdish/Dish1_w1FRET_t1.TIF: [testng] [2025-03-02 02:18:51,063] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD4_ISOtoDA_4well/Dish10_w1FRET_s1_t1.TIF: [testng] [2025-03-02 02:18:59,542] [pool-1-thread-3] Initializing /data/tristan/data IJM/tl_ z/MDA_TL_z_t1.TIF: [testng] [2025-03-02 02:19:02,567] [pool-1-thread-1] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211123_HTR1A_ISOto5HT_4well/Dish1_w1FRET_s1_t1.TIF: [testng] [2025-03-02 02:19:22,405] [pool-1-thread-10] Initializing /data/mike/TEST 1_7_w2EN GFP_s1_t61.STK: [testng] [2025-03-02 02:19:23,867] [pool-1-thread-3] Initializing /data/qa-16915/m-01-561.ome.tif: [testng] [2025-03-02 02:19:28,784] [pool-1-thread-10] Initializing /data/josh/2101to600e.stk: [testng] [2025-03-02 02:19:35,436] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w1Filter DAPI.TIF: [testng] [2025-03-02 02:19:37,403] [pool-1-thread-7] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish3_w1FRET_t1.TIF: [testng] [2025-03-02 02:19:39,763] [pool-1-thread-4] Initializing /data/cumol-test-series/23.001: [testng] [2025-03-02 02:19:44,779] [pool-1-thread-3] Initializing /data/josh/2101to400bstk.stk: [testng] [2025-03-02 02:20:23,883] [pool-1-thread-8] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w3Filter TRITC.jpg: [testng] [2025-03-02 02:20:26,416] [pool-1-thread-8] Initializing /data/chris/exp1_w1CSU GREEN_s3_t002.stk: [testng] [2025-03-02 02:20:27,306] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211202_HTR1E_ISOto5HT_4well/Dish4_w1FRET_s1_t1.TIF: [testng] [2025-03-02 02:20:37,920] [pool-1-thread-8] Initializing /data/chris-de-graffenried/ND C4 488 PLK 5682_w1sRFP.stk: [testng] [2025-03-02 02:20:40,053] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w2Filter FITC.TIF: [testng] [2025-03-02 02:20:45,944] [pool-1-thread-10] Initializing /data/andressa/RPE/Sparse/Collagen/Color Combine.tif: [testng] [2025-03-02 02:20:53,521] [pool-1-thread-10] Initializing /data/jae/RGB_s34.tif: [testng] [2025-03-02 02:20:59,189] [pool-1-thread-8] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t2.TIF: [testng] [2025-03-02 02:21:00,726] [pool-1-thread-8] Used files list does not include base file [testng] [2025-03-02 02:21:05,105] [pool-1-thread-10] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR1D_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-02 02:21:53,470] [pool-1-thread-8] Initializing /data/ascb/mt prc1 kif4.tif: [testng] [2025-03-02 02:21:59,094] [pool-1-thread-8] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.TIF: [testng] [2025-03-02 02:22:05,366] [pool-1-thread-8] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD2_ISOtoDA_35mmdish/Dish4_w1FRET_t1.TIF: [testng] [2025-03-02 02:23:09,746] [pool-1-thread-6] Initializing /data/qa-16915/m-01.tif: [testng] [2025-03-02 02:23:11,083] [pool-1-thread-3] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2_001_w1DUAL 491-561_t1.TIF: [testng] [2025-03-02 02:23:18,079] [pool-1-thread-6] Initializing /data/chris/Stream-2(partial).stk: [testng] [2025-03-02 02:23:22,763] [pool-1-thread-2] Initializing 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02:50:01,964] [pool-1-thread-7] Initializing /data/imagesc-39526/20200622_GDF9_D21_MT Ovary_1/MT_Ovary-11_w1conf640_s1.stk: [testng] [2025-03-02 02:50:11,894] [pool-1-thread-5] Initializing /data/alex/48h/48h_siGW25_w2FITC.TIF: [testng] [2025-03-02 02:50:20,566] [pool-1-thread-5] Initializing /data/qa-16915/m-04.tif: [testng] [2025-03-02 02:50:27,947] [pool-1-thread-5] Initializing /data/graham/G_Wright raw.stk: [testng] [2025-03-02 02:50:30,845] [pool-1-thread-7] Initializing /data/qa-16915/m-02-561.ome.tif: [testng] [2025-03-02 02:50:34,369] [pool-1-thread-5] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_Vec_ISOtoDA_4well/Dish6_w1FRET_s1_t1.TIF: [testng] [2025-03-02 02:50:43,472] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Sparse/Serum/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-02 02:50:55,441] [pool-1-thread-7] Initializing /data/josh/2101to600b.stk: [testng] [2025-03-02 02:51:22,924] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full 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02:52:23,623] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Sparse/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-02 02:52:35,269] [pool-1-thread-3] Initializing /data/andressa/RPE/Sparse/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-02 02:52:47,582] [pool-1-thread-3] Initializing /data/alex/13/LJN_Y1136_13_w2FITC_t2.STK: [testng] [2025-03-02 02:53:01,679] [pool-1-thread-3] Initializing /data/josh/EKM49/EKM49_w2568 -TRITC-_t1.TIF: [testng] [2025-03-02 02:53:13,950] [pool-1-thread-4] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211122_HTR5_ISOto5HT_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-02 02:54:37,347] [pool-1-thread-3] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t2.TIF: [testng] [2025-03-02 02:54:38,282] [pool-1-thread-3] Used files list does not include base file [testng] [2025-03-02 02:54:51,962] [pool-1-thread-11] Initializing /data/tristan/data IJM/mw3_z/MDA_z_MW3(GFP_RFP_GLP)_w3GLP.TIF: [testng] [2025-03-02 02:54:56,100] [pool-1-thread-8] Initializing /data/qa-16915/m-04-561.tif: [testng] [2025-03-02 02:55:01,046] [pool-1-thread-9] Initializing /data/alex/15/LJN_Y1136_15_w2DAPI_t2.STK: [testng] [2025-03-02 02:55:01,605] [pool-1-thread-8] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-02 02:55:02,203] [pool-1-thread-11] Initializing /data/steve/Experiment2.tif: [testng] [2025-03-02 02:55:06,173] [pool-1-thread-11] Initializing /data/qa-16907/1_w1Single SPI 405.TIF: [testng] [2025-03-02 02:55:09,046] [pool-1-thread-3] Initializing /data/chris/exp1_w1CSU GREEN_s3_t001.stk: [testng] [2025-03-02 02:55:11,079] [pool-1-thread-9] Initializing /data/stephane/Lame7-E5-Y+-001.stk: [testng] [2025-03-02 02:55:11,585] [pool-1-thread-8] Initializing /data/thomas/t_test2001.tif: [testng] [2025-03-02 02:55:13,052] [pool-1-thread-3] Initializing /data/lee/20130116-u2os-celldensitytest-72h-96h_m08_s9_w2766e46f1-81be-45a2-88b1-abe8da58c47a.tif: [testng] [2025-03-02 02:55:13,878] [pool-1-thread-11] Initializing /data/dave/Z Series.stk: [testng] [2025-03-02 02:55:15,678] [pool-1-thread-9] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/Color Combine.tif: [testng] [2025-03-02 02:55:16,160] [pool-1-thread-8] Initializing /data/qa-16915/m-02-488.ome.tif: [testng] [2025-03-02 02:55:17,902] [pool-1-thread-3] Initializing /data/tristan/data IJM/mw2/MDA_mw2(GFP-RFP)_w1GFP.TIF: [testng] [2025-03-02 02:55:18,462] [pool-1-thread-11] Initializing /data/lee/IXMtest_P24_s9_w560D948A4-4D16-49D0-9080-7575267498F9.tif: [testng] [2025-03-02 02:55:20,568] [pool-1-thread-9] Initializing /data/samples/single-series-test/test_w1.TIF: [testng] [2025-03-02 02:55:21,367] [pool-1-thread-8] Initializing /data/jacek/YFP2trans.tif: [testng] [2025-03-02 02:55:23,747] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2025-03-02 02:55:29,336] [pool-1-thread-8] Initializing 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03:04:55,140] [pool-1-thread-12] Initializing /data/public/ssbd-repos-000232/FigureS2/TIFF/20211116_DRD3_ISOtoDA_35mmdish/Dish2_w1FRET_t1.TIF: [testng] [2025-03-02 03:04:59,044] [pool-1-thread-9] Initializing /data/grant/X.STK: [testng] [2025-03-02 03:05:07,582] [pool-1-thread-9] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t41_w1Laser4054BD4BP_t1.stk: [testng] [2025-03-02 03:05:31,388] [pool-1-thread-7] Initializing /data/qa-16915/m-01-488.ome.tif: [testng] [2025-03-02 03:05:32,727] [pool-1-thread-9] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/Color Combine.tif: [testng] [2025-03-02 03:05:38,203] [pool-1-thread-7] Initializing /data/andressa/RPE/Sparse/Serum/120806_2_w1Filter DAPI.TIF: [testng] [2025-03-02 03:05:42,726] [pool-1-thread-9] Initializing /data/alex/14/LJN_Y1136_14_w2FITC_t2.STK: [testng] [2025-03-02 03:05:57,768] [pool-1-thread-7] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2Test_001_w1DUAL 491-561.TIF: [testng] 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Processing appender named [logfile-main] [testng] 04:41:22,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:41:22,094 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-02_04-41-22.log] [testng] 04:41:22,095 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12a59b23 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 13833, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 179 minutes 45 seconds Finished: SUCCESS