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Started by upstream project "BIOFORMATS-test-repo" build number 43 originally caused by: Started by upstream project "Trigger" build number 50 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins1451350885738149111.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_6053_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:00,813 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:00,817 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:21:00,817 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:00,820 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:00,821 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:00,821 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:00,822 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:00,822 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:00,824 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:00,825 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:00,826 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:00,827 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:01,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:01,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:01,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:01,095 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:01,101 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:01,102 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:01,102 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:01,102 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:01,103 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:21:01,104 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:21:01,104 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 280 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-24 01:21:01,116] [main] java.version = 17.0.2 [testng] 01:21:01,121 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:01,121 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:01,185 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-24_01-21-01.log] [testng] 01:21:01,187 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-04-24 01:21:01,190] [main] testng.directory = /data [testng] [2024-04-24 01:21:01,191] [main] testng.configDirectory = /config [testng] [2024-04-24 01:21:01,206] [main] testng.multiplier = 1.0 [testng] [2024-04-24 01:21:01,207] [main] testng.in-memory = false [testng] [2024-04-24 01:21:01,208] [main] testng.allow-missing = false [testng] [2024-04-24 01:21:01,208] [main] user.language = en [testng] [2024-04-24 01:21:01,208] [main] user.country = ${user.country} [testng] [2024-04-24 01:21:01,208] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-04-24 01:21:15,942] [main] ---------------------------------------- [testng] [2024-04-24 01:21:15,942] [main] Total files: 4424 [testng] [2024-04-24 01:21:15,943] [main] Scan time: 14.733 s (3 ms/file) [testng] [2024-04-24 01:21:15,943] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-24 01:23:01,952] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z023.tif: [testng] 01:23:01,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:01,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:01,955 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-24_01-23-01.log] [testng] 01:23:01,956 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6bd8f4b1 - End of configuration. [testng] [2024-04-24 01:23:01,990] [pool-1-thread-12] Initializing /data/sub-resolution/Leica-1/Leica-1-subifds.tiff: [testng] 01:23:01,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:01,991 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:01,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-24_01-23-01.log] [testng] 01:23:01,992 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ffdfd6d - End of configuration. [testng] [2024-04-24 01:23:02,030] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] 01:23:02,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:02,030 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:02,031 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-24_01-23-02.log] [testng] 01:23:02,031 |-INFO in ch.qos.logback.core.sift.SiftProcessor@701ab1a3 - End of configuration. [testng] [2024-04-24 01:23:02,072] [pool-1-thread-10] Initializing /data/josiah/cell-Z28.C1.tiff: [testng] 01:23:02,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:23:02,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:02,073 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-24_01-23-02.log] [testng] 01:23:02,073 |-INFO in ch.qos.logback.core.sift.SiftProcessor@74534095 - End of configuration. [testng] [2024-04-24 01:23:02,100] [pool-1-thread-9] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] 01:23:02,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:23:02,100 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:02,100 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-24_01-23-02.log] [testng] 01:23:02,101 |-INFO in ch.qos.logback.core.sift.SiftProcessor@445d15ae - End of configuration. [testng] [2024-04-24 01:23:02,128] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0248.TIF: [testng] 01:23:02,128 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:23:02,128 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:02,129 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-24_01-23-02.log] [testng] 01:23:02,129 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2028a983 - End of configuration. [testng] [2024-04-24 01:23:02,182] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z003.tif: [testng] 01:23:02,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:23:02,183 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:02,183 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-24_01-23-02.log] [testng] 01:23:02,183 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3512dae3 - End of configuration. [testng] [2024-04-24 01:23:02,208] [pool-1-thread-6] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] 01:23:02,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:23:02,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:02,209 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-24_01-23-02.log] [testng] 01:23:02,210 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fe126e6 - End of configuration. [testng] [2024-04-24 01:23:02,261] [pool-1-thread-5] Initializing /data/ascb/FND-12_PorterFranziniSarcoplasmic_4800.tif: [testng] 01:23:02,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:23:02,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:02,262 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-24_01-23-02.log] [testng] 01:23:02,263 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39c3abd5 - End of configuration. [testng] [2024-04-24 01:23:02,313] [pool-1-thread-4] Initializing /data/marc/ball48_original_10x.tif: [testng] 01:23:02,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:23:02,313 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:02,314 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-24_01-23-02.log] [testng] 01:23:02,314 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e543e03 - End of configuration. [testng] [2024-04-24 01:23:02,335] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z004.tif: [testng] 01:23:02,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:23:02,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:02,336 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-24_01-23-02.log] [testng] 01:23:02,336 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53ea55e7 - End of configuration. [testng] [2024-04-24 01:23:02,366] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] 01:23:02,367 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:23:02,367 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:02,367 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-24_01-23-02.log] [testng] 01:23:02,368 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3642d3e7 - End of configuration. [testng] [2024-04-24 01:23:04,810] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-04-24 01:23:04,830] [pool-1-thread-1] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-04-24 01:23:04,879] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-04-24 01:23:04,909] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z008.tif: [testng] [2024-04-24 01:23:04,934] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] [2024-04-24 01:23:04,962] [pool-1-thread-9] Initializing /data/josiah/cell-Z5.C1.tiff: [testng] [2024-04-24 01:23:04,987] [pool-1-thread-10] Initializing /data/curtis/test3.tiff: [testng] [2024-04-24 01:23:05,008] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z040.tif: [testng] [2024-04-24 01:23:05,032] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z063.tif: [testng] [2024-04-24 01:23:05,559] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] [2024-04-24 01:23:05,622] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-04-24 01:23:05,651] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-04-24 01:23:05,687] [pool-1-thread-3] Initializing /data/big-images/2kx2k.tif: [testng] [2024-04-24 01:23:05,740] [pool-1-thread-7] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-04-24 01:23:05,775] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0225.TIF: [testng] [2024-04-24 01:23:05,823] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z021.tif: [testng] [2024-04-24 01:23:05,860] [pool-1-thread-9] Initializing /data/damian/09m.tiff: [testng] [2024-04-24 01:23:06,219] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z024.tif: [testng] [2024-04-24 01:23:06,267] [pool-1-thread-11] Initializing /data/josiah/cell-Z37.C1.tiff: [testng] [2024-04-24 01:23:06,317] [pool-1-thread-7] Initializing /data/ascb/FND-26_PaladeGlycogen_4800.tif: [testng] [2024-04-24 01:23:06,362] [pool-1-thread-8] Initializing /data/josh/3Aa_C2_TP1.tiff: [testng] [2024-04-24 01:23:06,418] [pool-1-thread-2] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] [2024-04-24 01:23:06,473] [pool-1-thread-4] Initializing /data/misc/mri-old.mov: [testng] [2024-04-24 01:23:06,499] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z012.tif: [testng] [2024-04-24 01:23:06,807] [pool-1-thread-10] Initializing /data/caroline/1828_L2_series_1.tif: [testng] [2024-04-24 01:23:06,874] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-04-24 01:23:06,928] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z028.tif: [testng] [2024-04-24 01:23:07,014] [pool-1-thread-9] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-04-24 01:23:07,105] [pool-1-thread-11] Initializing /data/brian/061124MitogreenDIV3Cell2-1 copy.tif: [testng] [2024-04-24 01:23:07,502] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z027.tif: [testng] [2024-04-24 01:23:07,780] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-04-24 01:23:07,879] [pool-1-thread-5] Initializing /data/kelsey/Live-Dead Assay 4000 nm pitch PU.TIF: [testng] [2024-04-24 01:23:07,917] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-02.tiff: [testng] [2024-04-24 01:23:08,022] [pool-1-thread-6] Initializing /data/brian/Ch1_fld1.tif: [testng] [2024-04-24 01:23:08,113] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-04-24 01:23:08,146] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-04-24 01:23:08,205] [pool-1-thread-10] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-04-24 01:23:08,434] [pool-1-thread-12] Initializing /data/lzw/test.tif: [testng] [2024-04-24 01:23:08,463] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-04-24 01:23:08,511] [pool-1-thread-8] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-04-24 01:23:08,935] [pool-1-thread-9] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-04-24 01:23:10,746] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0218.TIF: [testng] [2024-04-24 01:23:10,796] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z037.tif: [testng] [2024-04-24 01:23:10,967] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-04-24 01:23:11,046] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z013.tif: [testng] [2024-04-24 01:23:11,164] [pool-1-thread-5] Initializing /data/public/condensation/C4.pattern7.tif: [testng] [2024-04-24 01:23:11,210] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z006.tif: [testng] 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01:24:55,845] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z020.tif: [testng] [2024-04-24 01:24:55,950] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-04-24 01:24:55,989] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0237.TIF: [testng] [2024-04-24 01:24:56,059] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z033.tif: [testng] [2024-04-24 01:24:56,084] [pool-1-thread-5] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-04-24 01:24:56,105] [pool-1-thread-4] Initializing /data/brian/insight.tiff: [testng] [2024-04-24 01:24:56,342] [pool-1-thread-10] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-04-24 01:24:56,382] [pool-1-thread-6] Initializing /data/public/condensation/A5.pattern4.tif: [testng] [2024-04-24 01:24:56,429] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-04-24 01:24:56,502] [pool-1-thread-5] Initializing /data/wayne/apple.tif: [testng] [2024-04-24 01:24:56,625] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-04-24 01:24:56,774] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-04-24 01:24:56,864] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z005.tif: [testng] [2024-04-24 01:24:56,916] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z025.tif: [testng] [2024-04-24 01:24:56,966] [pool-1-thread-5] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-04-24 01:24:57,130] [pool-1-thread-6] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-04-24 01:24:57,159] [pool-1-thread-12] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-04-24 01:24:57,220] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-04-24 01:24:57,383] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-04-24 01:24:57,406] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-04-24 01:24:57,478] [pool-1-thread-11] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-04-24 01:24:57,551] [pool-1-thread-5] Initializing /data/martin/tester.tif: [testng] [2024-04-24 01:24:57,794] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-04-24 01:24:57,835] [pool-1-thread-6] Initializing /data/josiah/cell-Z35.C0.tiff: [testng] [2024-04-24 01:24:57,874] [pool-1-thread-10] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-04-24 01:24:58,037] [pool-1-thread-3] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-04-24 01:24:58,701] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-04-24 01:24:58,887] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z034.tif: [testng] [2024-04-24 01:24:59,006] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-04-24 01:24:59,028] [pool-1-thread-6] Initializing /data/ascb/FND-22_FawcettLongitudinalMammalian_4800.tif: [testng] [2024-04-24 01:24:59,070] [pool-1-thread-2] Initializing /data/ascb/bad/FND-20_FawcettLongitudinalMidpieces_4800.tif: [testng] [2024-04-24 01:24:59,182] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-04-24 01:24:59,487] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z010.tif: [testng] [2024-04-24 01:24:59,527] [pool-1-thread-12] Initializing /data/public/libtiff/strike.tif: [testng] [2024-04-24 01:24:59,574] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z034.tif: [testng] [2024-04-24 01:24:59,691] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z056.tif: [testng] [2024-04-24 01:24:59,894] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-04-24 01:24:59,935] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-04-24 01:25:00,016] [pool-1-thread-12] Initializing /data/public/condensation/C4.pattern9.tif: [testng] [2024-04-24 01:25:00,115] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-04-24 01:25:00,158] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z013.tif: [testng] [2024-04-24 01:25:00,284] [pool-1-thread-9] Initializing /data/public/condensation/A6.pattern1.tif: [testng] [2024-04-24 01:25:00,406] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-04-24 01:25:00,569] [pool-1-thread-5] Initializing /data/curtis/test1.tiff: [testng] [2024-04-24 01:25:00,587] [pool-1-thread-1] Initializing /data/ascb/CYT-146_Fader_Distribution.tif: [testng] [2024-04-24 01:25:00,704] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-04-24 01:25:00,842] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-04-24 01:25:00,914] [pool-1-thread-5] Initializing /data/jonathan/XSEC-02.TIF: [testng] [2024-04-24 01:25:00,965] [pool-1-thread-9] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-04-24 01:25:01,328] [pool-1-thread-4] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-04-24 01:25:01,519] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-04-24 01:25:02,164] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-04-24 01:25:02,258] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0235.TIF: [testng] [2024-04-24 01:25:02,629] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0220.TIF: [testng] [2024-04-24 01:25:02,825] [pool-1-thread-4] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-04-24 01:25:03,003] [pool-1-thread-5] Initializing /data/wayne/northern-8bit.tif: [testng] [2024-04-24 01:25:03,095] [pool-1-thread-12] Initializing /data/glen/6307wmmidb4237m_cmle.tif: [testng] [2024-04-24 01:25:03,315] [pool-1-thread-5] Initializing /data/jae/Second image.tif: [testng] [2024-04-24 01:25:03,463] [pool-1-thread-4] Initializing /data/jayne/Zst_13/WTERZ2_Series13_z000_ch00.tif: [testng] [2024-04-24 01:25:03,784] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z057.tif: [testng] [2024-04-24 01:25:03,968] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-04-24 01:25:04,034] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z043.tif: [testng] [2024-04-24 01:25:04,175] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-04-24 01:25:04,439] [pool-1-thread-12] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-04-24 01:25:04,885] [pool-1-thread-5] Initializing /data/lzw/BoutonVsAxon.tif: [testng] [2024-04-24 01:25:05,032] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-04-24 01:25:05,271] [pool-1-thread-9] Initializing /data/public/condensation/B12.pattern1.tif: [testng] [2024-04-24 01:25:05,324] [pool-1-thread-11] Initializing /data/josiah/cell-Z11.C1.tiff: [testng] [2024-04-24 01:25:05,516] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-04-24 01:25:05,728] [pool-1-thread-11] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-04-24 01:25:05,764] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z021.tif: [testng] [2024-04-24 01:25:05,807] [pool-1-thread-6] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-04-24 01:25:06,044] [pool-1-thread-11] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-04-24 01:25:06,092] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0252.TIF: [testng] [2024-04-24 01:25:06,217] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z029.tif: [testng] [2024-04-24 01:25:06,551] [pool-1-thread-11] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-04-24 01:25:06,602] [pool-1-thread-6] Initializing /data/tom-kazimiers/test_exiftool2_resave.tiff: [testng] [2024-04-24 01:25:06,824] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z011.tif: [testng] [2024-04-24 01:25:06,933] [pool-1-thread-6] Initializing /data/ascb/FND-28a_PaladeHepatocyteLabeled_4800.tif: [testng] [2024-04-24 01:25:08,796] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-04-24 01:25:09,086] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-04-24 01:25:09,115] [pool-1-thread-9] Initializing /data/kevino/_BF_00001.tif: [testng] [2024-04-24 01:25:09,360] [pool-1-thread-5] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-04-24 01:25:09,463] [pool-1-thread-3] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-04-24 01:25:09,527] [pool-1-thread-11] Initializing /data/curtis/test2.tiff: [testng] [2024-04-24 01:25:09,588] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] [2024-04-24 01:25:09,763] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z000.tif: [testng] [2024-04-24 01:25:09,799] [pool-1-thread-9] Initializing /data/josiah/cell-Z8.C1.tiff: [testng] [2024-04-24 01:25:09,876] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-04-24 01:25:09,906] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-04-24 01:25:10,007] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-60.tiff: [testng] [2024-04-24 01:25:10,217] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z016.tif: [testng] [2024-04-24 01:25:10,243] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z010.tif: [testng] [2024-04-24 01:25:10,293] [pool-1-thread-11] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-04-24 01:25:10,321] [pool-1-thread-3] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-04-24 01:25:10,375] [pool-1-thread-4] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-04-24 01:25:11,688] [pool-1-thread-9] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-04-24 01:25:11,857] [pool-1-thread-5] Initializing /data/curtis/clown.tif: [testng] [2024-04-24 01:25:11,912] [pool-1-thread-7] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-04-24 01:25:12,079] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-04-24 01:25:12,188] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z039.tif: [testng] [2024-04-24 01:25:12,221] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-04-24 01:25:12,416] [pool-1-thread-3] Initializing /data/public/condensation/C4.pattern6.tif: [testng] [2024-04-24 01:25:12,530] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z034.tif: [testng] [2024-04-24 01:25:12,667] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0223.TIF: [testng] [2024-04-24 01:25:12,887] [pool-1-thread-11] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-04-24 01:25:12,968] [pool-1-thread-3] Initializing /data/curtis/map/brown-fox: [testng] [2024-04-24 01:25:13,128] [pool-1-thread-9] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-04-24 01:25:13,202] [pool-1-thread-3] Initializing /data/ascb/bad/FND-18_FawcettGolgi_4800.tif: [testng] [2024-04-24 01:25:13,312] [pool-1-thread-11] Initializing /data/public/libtiff/quad-tile.tif: [testng] [2024-04-24 01:25:13,532] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0202.TIF: [testng] [2024-04-24 01:25:13,719] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-04-24 01:25:13,749] [pool-1-thread-9] Initializing /data/ascb/CYT-23_BaintonGlycogenB_4800.tif: [testng] [2024-04-24 01:25:15,568] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0245.TIF: [testng] [2024-04-24 01:25:15,960] [pool-1-thread-5] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-04-24 01:25:16,214] [pool-1-thread-10] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-04-24 01:25:16,396] [pool-1-thread-11] Initializing /data/ascb/CYT-90_PasolliMousePanoramic_4800.tif: [testng] [2024-04-24 01:25:16,462] [pool-1-thread-5] Initializing /data/damian/33m.tiff: [testng] [2024-04-24 01:25:16,864] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-04-24 01:25:16,964] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-04-24 01:25:17,236] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0213.TIF: [testng] [2024-04-24 01:25:17,284] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-04-24 01:25:17,813] [pool-1-thread-12] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-04-24 01:25:17,972] [pool-1-thread-5] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-04-24 01:25:17,994] [pool-1-thread-10] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-04-24 01:25:18,110] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 4 minutes 41 seconds Finished: SUCCESS