![[Jenkins]](/jenkins/static/e865dcf2/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 383 originally caused by: Started by upstream project "Trigger" build number 405 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins12581466596676581452.sh + '[' lim = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_60532_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:33:15,408 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:33:15,409 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - No custom configurators were discovered as a service. [testng] 00:33:15,409 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:33:15,410 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:33:15,411 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:33:15,411 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:33:15,411 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:33:15,411 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:33:15,412 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:33:15,412 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:33:15,413 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:33:15,413 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:33:15,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:33:15,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:33:15,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:33:15,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:33:15,600 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:33:15,600 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:33:15,600 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:33:15,601 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:33:15,601 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3f6f6701 - End of configuration. [testng] 00:33:15,601 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4f80542f - Registering current configuration as safe fallback point [testng] 00:33:15,601 |-INFO in ch.qos.logback.classic.util.ContextInitializer@2beee7ff - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 189 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-19 00:33:15,610] [main] java.version = 17.0.2 [testng] 00:33:15,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:33:15,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:15,654 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-19_00-33-15.log] [testng] 00:33:15,656 |-INFO in ch.qos.logback.core.sift.SiftProcessor@14bdbc74 - End of configuration. [testng] [2025-03-19 00:33:15,658] [main] testng.directory = /data [testng] [2025-03-19 00:33:15,658] [main] testng.configDirectory = /config [testng] [2025-03-19 00:33:15,667] [main] testng.multiplier = 1.0 [testng] [2025-03-19 00:33:15,667] [main] testng.in-memory = false [testng] [2025-03-19 00:33:15,668] [main] testng.allow-missing = false [testng] [2025-03-19 00:33:15,668] [main] user.language = en [testng] [2025-03-19 00:33:15,668] [main] user.country = ${user.country} [testng] [2025-03-19 00:33:15,668] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-19 00:33:16,275] [main] ---------------------------------------- [testng] [2025-03-19 00:33:16,275] [main] Total files: 21 [testng] [2025-03-19 00:33:16,275] [main] Scan time: 0.607 s (28 ms/file) [testng] [2025-03-19 00:33:16,275] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 20 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-19 00:33:27,694] [pool-1-thread-1] Initializing /data/venu/Kontrolle0003.lim: [testng] 00:33:27,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:33:27,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:27,696 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-19_00-33-27.log] [testng] 00:33:27,696 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1db78e1e - End of configuration. [testng] [2025-03-19 00:33:28,279] [pool-1-thread-12] Initializing /data/venu/Kontrolle0005.lim: [testng] 00:33:28,279 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:33:28,279 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:28,280 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-19_00-33-28.log] [testng] 00:33:28,280 |-INFO in ch.qos.logback.core.sift.SiftProcessor@629163f2 - End of configuration. [testng] [2025-03-19 00:33:28,696] [pool-1-thread-11] Initializing /data/venu/Kontrolle0004.lim: [testng] 00:33:28,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:33:28,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:28,697 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-19_00-33-28.log] [testng] 00:33:28,697 |-INFO in ch.qos.logback.core.sift.SiftProcessor@171003fe - End of configuration. [testng] [2025-03-19 00:33:29,091] [pool-1-thread-10] Initializing /data/venu/Kontrolle0002.lim: [testng] 00:33:29,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:33:29,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:29,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-19_00-33-29.log] [testng] 00:33:29,092 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a626cee - End of configuration. [testng] [2025-03-19 00:33:29,543] [pool-1-thread-9] Initializing /data/venu/Kontrolle0018.lim: [testng] 00:33:29,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:33:29,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:29,544 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-19_00-33-29.log] [testng] 00:33:29,545 |-INFO in ch.qos.logback.core.sift.SiftProcessor@705c8ed6 - End of configuration. [testng] [2025-03-19 00:33:30,135] [pool-1-thread-8] Initializing /data/venu/Kontrolle0011.lim: [testng] 00:33:30,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:33:30,135 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:30,136 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-19_00-33-30.log] [testng] 00:33:30,136 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5254d226 - End of configuration. [testng] [2025-03-19 00:33:30,800] [pool-1-thread-7] Initializing /data/venu/Kontrolle0009.lim: [testng] 00:33:30,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:33:30,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:30,801 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-19_00-33-30.log] [testng] 00:33:30,802 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d51cb2e - End of configuration. [testng] [2025-03-19 00:33:31,409] [pool-1-thread-6] Initializing /data/venu/Kontrolle0001.lim: [testng] 00:33:31,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:33:31,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:31,410 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-19_00-33-31.log] [testng] 00:33:31,410 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6afa9ab1 - End of configuration. [testng] [2025-03-19 00:33:32,086] [pool-1-thread-5] Initializing /data/venu/Kontrolle0020.lim: [testng] 00:33:32,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:33:32,086 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:32,087 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-19_00-33-32.log] [testng] 00:33:32,087 |-INFO in ch.qos.logback.core.sift.SiftProcessor@386870bb - End of configuration. [testng] [2025-03-19 00:33:32,781] [pool-1-thread-4] Initializing /data/venu/Kontrolle0019.lim: [testng] 00:33:32,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:33:32,782 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:32,783 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-19_00-33-32.log] [testng] 00:33:32,783 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a9ec837 - End of configuration. [testng] [2025-03-19 00:33:33,539] [pool-1-thread-3] Initializing /data/venu/Kontrolle0012.lim: [testng] 00:33:33,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:33:33,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:33,540 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-19_00-33-33.log] [testng] 00:33:33,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d56e6bd - End of configuration. [testng] [2025-03-19 00:33:34,250] [pool-1-thread-2] Initializing /data/venu/Kontrolle0017.lim: [testng] 00:33:34,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:33:34,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:33:34,251 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-19_00-33-34.log] [testng] 00:33:34,251 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5df9fdb - End of configuration. [testng] [2025-03-19 00:33:41,761] [pool-1-thread-1] Initializing /data/venu/Kontrolle0016.lim: [testng] [2025-03-19 00:33:42,167] [pool-1-thread-8] Initializing /data/venu/Kontrolle0010.lim: [testng] [2025-03-19 00:33:42,594] [pool-1-thread-4] Initializing /data/venu/Kontrolle0021.lim: [testng] [2025-03-19 00:33:43,002] [pool-1-thread-9] Initializing /data/venu/Kontrolle0007.lim: [testng] [2025-03-19 00:33:43,368] [pool-1-thread-3] Initializing /data/venu/Kontrolle0013.lim: [testng] [2025-03-19 00:33:43,774] [pool-1-thread-11] Initializing /data/venu/Kontrolle0008.lim: [testng] [2025-03-19 00:33:44,180] [pool-1-thread-12] Initializing /data/venu/Kontrolle0015.lim: [testng] [2025-03-19 00:33:44,590] [pool-1-thread-10] Initializing /data/venu/Kontrolle0014.lim: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1060, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 38 seconds Finished: SUCCESS