![[Jenkins]](/jenkins/static/316c2b55/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 387 originally caused by: Started by upstream project "Trigger" build number 410 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@11 [BIOFORMATS-test-folder@11] $ /bin/bash -xe /tmp/jenkins16598933295482442413.sh + '[' lim = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_61172_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 00:26:14,920 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15 [testng] 00:26:14,922 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - No custom configurators were discovered as a service. [testng] 00:26:14,922 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:26:14,923 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:26:14,924 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:26:14,924 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:26:14,924 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:26:14,924 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:26:14,925 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:26:14,926 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:26:14,926 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:26:14,926 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:26:15,109 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:26:15,110 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:26:15,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:26:15,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:26:15,140 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:26:15,140 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:26:15,140 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:26:15,140 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:26:15,140 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@65c7a252 - End of configuration. [testng] 00:26:15,141 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@38cee291 - Registering current configuration as safe fallback point [testng] 00:26:15,142 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4d910fd6 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 217 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2025-03-22 00:26:15,151] [main] java.version = 11.0.16 [testng] 00:26:15,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:26:15,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:15,198 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2025-03-22_00-26-15.log] [testng] 00:26:15,200 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d73f29 - End of configuration. [testng] [2025-03-22 00:26:15,203] [main] testng.directory = /data [testng] [2025-03-22 00:26:15,204] [main] testng.configDirectory = /config [testng] [2025-03-22 00:26:15,214] [main] testng.multiplier = 1.0 [testng] [2025-03-22 00:26:15,215] [main] testng.in-memory = false [testng] [2025-03-22 00:26:15,215] [main] testng.allow-missing = false [testng] [2025-03-22 00:26:15,216] [main] user.language = en [testng] [2025-03-22 00:26:15,216] [main] user.country = ${user.country} [testng] [2025-03-22 00:26:15,216] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2025-03-22 00:26:15,737] [main] ---------------------------------------- [testng] [2025-03-22 00:26:15,737] [main] Total files: 21 [testng] [2025-03-22 00:26:15,737] [main] Scan time: 0.521 s (24 ms/file) [testng] [2025-03-22 00:26:15,737] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 20 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2025-03-22 00:26:22,737] [pool-1-thread-1] Initializing /data/venu/Kontrolle0009.lim: [testng] 00:26:22,738 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:26:22,738 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:22,740 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2025-03-22_00-26-22.log] [testng] 00:26:22,741 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57ca4d96 - End of configuration. [testng] [2025-03-22 00:26:23,144] [pool-1-thread-12] Initializing /data/venu/Kontrolle0007.lim: [testng] 00:26:23,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:26:23,145 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:23,146 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2025-03-22_00-26-23.log] [testng] 00:26:23,146 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25bb7269 - End of configuration. [testng] [2025-03-22 00:26:23,500] [pool-1-thread-11] Initializing /data/venu/Kontrolle0020.lim: [testng] 00:26:23,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:26:23,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:23,501 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2025-03-22_00-26-23.log] [testng] 00:26:23,501 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fa7e76f - End of configuration. [testng] [2025-03-22 00:26:23,896] [pool-1-thread-10] Initializing /data/venu/Kontrolle0005.lim: [testng] 00:26:23,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:26:23,896 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:23,897 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2025-03-22_00-26-23.log] [testng] 00:26:23,898 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46fc7e9f - End of configuration. [testng] [2025-03-22 00:26:24,192] [pool-1-thread-9] Initializing /data/venu/Kontrolle0004.lim: [testng] 00:26:24,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:26:24,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:24,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2025-03-22_00-26-24.log] [testng] 00:26:24,194 |-INFO in ch.qos.logback.core.sift.SiftProcessor@434888f3 - End of configuration. [testng] [2025-03-22 00:26:24,535] [pool-1-thread-8] Initializing /data/venu/Kontrolle0021.lim: [testng] 00:26:24,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:26:24,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:24,536 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2025-03-22_00-26-24.log] [testng] 00:26:24,537 |-INFO in ch.qos.logback.core.sift.SiftProcessor@201d23e4 - End of configuration. [testng] [2025-03-22 00:26:24,841] [pool-1-thread-7] Initializing /data/venu/Kontrolle0015.lim: [testng] 00:26:24,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:26:24,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:24,842 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2025-03-22_00-26-24.log] [testng] 00:26:24,843 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25329239 - End of configuration. [testng] [2025-03-22 00:26:25,178] [pool-1-thread-6] Initializing /data/venu/Kontrolle0003.lim: [testng] 00:26:25,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:26:25,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:25,180 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2025-03-22_00-26-25.log] [testng] 00:26:25,180 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5086bc88 - End of configuration. [testng] [2025-03-22 00:26:25,499] [pool-1-thread-5] Initializing /data/venu/Kontrolle0001.lim: [testng] 00:26:25,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:26:25,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:25,500 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2025-03-22_00-26-25.log] [testng] 00:26:25,500 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25af6311 - End of configuration. [testng] [2025-03-22 00:26:25,768] [pool-1-thread-4] Initializing /data/venu/Kontrolle0014.lim: [testng] 00:26:25,769 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:26:25,769 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:25,769 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2025-03-22_00-26-25.log] [testng] 00:26:25,770 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28cc416f - End of configuration. [testng] [2025-03-22 00:26:26,047] [pool-1-thread-3] Initializing /data/venu/Kontrolle0013.lim: [testng] 00:26:26,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:26:26,047 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:26,048 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2025-03-22_00-26-26.log] [testng] 00:26:26,048 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c05358e - End of configuration. [testng] [2025-03-22 00:26:26,385] [pool-1-thread-2] Initializing /data/venu/Kontrolle0019.lim: [testng] 00:26:26,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:26:26,385 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:26:26,386 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2025-03-22_00-26-26.log] [testng] 00:26:26,386 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6ad9b20d - End of configuration. [testng] [2025-03-22 00:26:32,375] [pool-1-thread-5] Initializing /data/venu/Kontrolle0017.lim: [testng] [2025-03-22 00:26:32,614] [pool-1-thread-10] Initializing /data/venu/Kontrolle0018.lim: [testng] [2025-03-22 00:26:32,858] [pool-1-thread-3] Initializing /data/venu/Kontrolle0012.lim: [testng] [2025-03-22 00:26:33,108] [pool-1-thread-1] Initializing /data/venu/Kontrolle0008.lim: [testng] [2025-03-22 00:26:33,414] [pool-1-thread-12] Initializing /data/venu/Kontrolle0016.lim: [testng] [2025-03-22 00:26:33,782] [pool-1-thread-4] Initializing /data/venu/Kontrolle0002.lim: [testng] [2025-03-22 00:26:34,018] [pool-1-thread-6] Initializing /data/venu/Kontrolle0010.lim: [testng] [2025-03-22 00:26:34,337] [pool-1-thread-8] Initializing /data/venu/Kontrolle0011.lim: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1060, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 26 seconds Finished: SUCCESS