10:19:29Started by upstream project "Trigger" build number 18910:19:29originally caused by:
10:19:29 Started by user devspace10:19:29Running as SYSTEM
10:19:29Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
10:19:29The recommended git tool is: NONE
10:19:29No credentials specified
10:19:29 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
10:19:29Fetching changes from the remote Git repository
10:19:29 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
10:19:29Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git10:19:29 > git --version # timeout=10
10:19:29 > git --version # 'git version 2.47.3'
10:19:29 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
10:19:30 > git rev-parse origin/merge_ci^{commit} # timeout=10
10:19:30Checking out Revision f2a9784d2954df2c015a30a229d206279984e7ae (origin/merge_ci)
10:19:30 > git config core.sparsecheckout # timeout=10
10:19:30 > git checkout -f f2a9784d2954df2c015a30a229d206279984e7ae # timeout=10
10:19:30Commit message: "Add version.properties to etc/omero.properties"
10:19:30 > git rev-list --no-walk 4ae7ac9a4ad63ba62e2efa90678aeebbeb35a3e0 # timeout=10
10:19:30Cleaning workspace
10:19:30 > git rev-parse --verify HEAD # timeout=10
10:19:30Resetting working tree
10:19:30 > git reset --hard # timeout=10
10:19:30 > git clean -fdx # timeout=10
10:19:30Copied 6 artifacts from "OMERO-python-superbuild-build" build number 13310:19:30[OMERO-build] $ /bin/bash -xe /tmp/jenkins11557735665987356090.sh
10:19:30+ mv omero-scripts/dist/omero_scripts-5.10.1.dev0.tar.gz .
10:19:30+ cd src
10:19:30+ export OMERO_BRANCH=merge_ci
10:19:30+ OMERO_BRANCH=merge_ci
10:19:30+ OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
10:19:30+ rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
10:19:30+ source /home/omero/settings.env
10:19:30++ OMERO_DB_HOST=pg
10:19:30++ OMERO_DB_USER=postgres
10:19:30++ OMERO_DB_PASS=
10:19:30++ OMERO_ROOT_PASS=omero
10:19:30++ OMERO_DATA_DIR=/OMERO
10:19:30++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
10:19:30+ python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
10:19:33+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl10:19:34Collecting zeroc-ice==3.6.5
10:19:34 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
10:19:37 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 10.3 MB/s eta 0:00:00
10:19:37Installing collected packages: zeroc-ice
10:19:38Successfully installed zeroc-ice-3.6.5
10:19:3810:19:38[notice] A new release of pip available: 22.3.1 -> 26.1
10:19:38[notice] To update, run: python3.11 -m pip install --upgrade pip
10:19:38+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
10:19:38Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
10:19:39Collecting setuptools<66
10:19:39 Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
10:19:39Collecting omero-py
10:19:39 Using cached omero_py-5.22.1-py3-none-any.whl (2.8 MB)
10:19:39Collecting appdirs
10:19:39 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
10:19:39Collecting future
10:19:39 Using cached future-1.0.0-py3-none-any.whl (491 kB)
10:19:40Collecting numpy<3,>=2
10:19:40 Using cached numpy-2.4.4-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
10:19:40Collecting Pillow>=10.0.0
10:19:40 Using cached pillow-12.2.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.1 MB)
10:19:40Collecting PyYAML
10:19:40 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
10:19:40Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
10:19:40Collecting requests
10:19:40 Using cached requests-2.33.1-py3-none-any.whl (64 kB)
10:19:40Collecting portalocker
10:19:40 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
10:19:41Collecting charset_normalizer<4,>=2
10:19:41 Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (214 kB)
10:19:41Collecting idna<4,>=2.5
10:19:41 Using cached idna-3.13-py3-none-any.whl (68 kB)
10:19:41Collecting urllib3<3,>=1.26
10:19:41 Using cached urllib3-2.6.3-py3-none-any.whl (131 kB)
10:19:41Collecting certifi>=2023.5.7
10:19:41 Using cached certifi-2026.4.22-py3-none-any.whl (135 kB)
10:19:41Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
10:19:41 Attempting uninstall: setuptools
10:19:41 Found existing installation: setuptools 65.5.1
10:19:41 Uninstalling setuptools-65.5.1:
10:19:41 Successfully uninstalled setuptools-65.5.1
10:19:47Successfully installed Pillow-12.2.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2026.4.22 charset_normalizer-3.4.7 future-1.0.0 idna-3.13 numpy-2.4.4 omero-py-5.22.1 portalocker-3.2.0 requests-2.33.1 setuptools-65.7.0 urllib3-2.6.3
10:19:4710:19:47[notice] A new release of pip available: 22.3.1 -> 26.1
10:19:47[notice] To update, run: python3.11 -m pip install --upgrade pip
10:19:47+ source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
10:19:47++ deactivate nondestructive
10:19:47++ '[' -n '' ']'
10:19:47++ '[' -n '' ']'
10:19:47++ hash -r
10:19:47++ '[' -n '' ']'
10:19:47++ unset VIRTUAL_ENV
10:19:47++ unset VIRTUAL_ENV_PROMPT
10:19:47++ '[' '!' nondestructive = nondestructive ']'
10:19:47++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
10:19:47++ export VIRTUAL_ENV
10:19:47++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:19:47++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:19:47++ export PATH
10:19:47++ '[' -n '' ']'
10:19:47++ '[' -z '' ']'
10:19:47++ _OLD_VIRTUAL_PS1=
10:19:47++ PS1='(omero-virtualenv) '
10:19:47++ export PS1
10:19:47++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
10:19:47++ export VIRTUAL_ENV_PROMPT
10:19:47++ hash -r
10:19:47+ source docs/hudson/OMERO.sh
10:19:47++ set -e
10:19:47++ set -u
10:19:47++ set -x
10:19:47++ source docs/hudson/functions.sh
10:19:47++ echo Building merge_ci
10:19:47Building merge_ci
10:19:47++ python3 ./build.py build-dev release-all
10:19:47Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
10:19:4710:19:47check-ivy:
10:19:47Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
10:19:47Created dir: /home/omero/workspace/OMERO-build/src/target
10:19:48:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:19:48:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:19:4810:19:48build-scons:
10:19:48Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
10:19:48No sub-builds to iterate on
10:19:48Entering /home/omero/workspace/OMERO-build/src/components/tools...
10:19:4810:19:48buildlist:
10:19:48:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:19:48:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:19:4810:19:48clean:
10:19:48Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:19:49Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:19:4910:19:49python-clean:
10:19:49WARNING: '' not a valid package name; please use only .-separated package names in setup.py
10:19:49/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-594-f2a9784d29-ice36-b142') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
10:19:49 warnings.warn(
10:19:49running clean
10:19:49Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
10:19:49Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
10:19:4910:19:49python-clean:
10:19:49WARNING: '' not a valid package name; please use only .-separated package names in setup.py
10:19:49/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-594-f2a9784d29-ice36-b142') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
10:19:49 warnings.warn(
10:19:49running clean
10:19:49Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
10:19:49Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:19:49Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:19:49Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:19:4910:19:49python-clean:
10:19:49WARNING: '' not a valid package name; please use only .-separated package names in setup.py
10:19:49/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-594-f2a9784d29-ice36-b142') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
10:19:49 warnings.warn(
10:19:49running clean
10:19:49Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
10:19:49Deleting directory /home/omero/workspace/OMERO-build/src/target
10:19:5010:19:50build-scons:
10:19:50Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
10:19:5010:19:50build:
10:19:50No sub-builds to iterate on
10:19:50Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:19:50Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:19:50Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
10:19:50Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:19:5010:19:50tools-init:
10:19:50no-op
10:19:5010:19:50retrieve:
10:19:50:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:19:50:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:20:1610:20:16prepare:
10:20:16Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
10:20:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
10:20:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
10:20:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:20:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:20:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
10:20:16Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
10:20:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:20:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:20:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:20:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:20:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:20:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:20:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
10:20:16Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
10:20:1610:20:16pre-compile:
10:20:16Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:20:16Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:20:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:20:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:20:17Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
10:20:1710:20:17compile:
10:20:17no-op
10:20:1710:20:17package:
10:20:17Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
10:20:1710:20:17install:
10:20:17:: delivering :: omero#omero_client;working@26c1bc7ef6b1 :: 5.6.3-594-f2a9784d29-ice36-b142 :: integration :: Fri May 01 10:19:50 UTC 2026
10:20:17 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
10:20:17:: publishing :: omero#omero_client
10:20:17 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-594-f2a9784d29-ice36-b142/omero_client-5.6.3-594-f2a9784d29-ice36-b142.jar
10:20:17 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-594-f2a9784d29-ice36-b142/omero_client-5.6.3-594-f2a9784d29-ice36-b142.xml
10:20:17Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:20:17Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:20:1810:20:18retrieve:
10:20:18:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:20:18:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:20:18Entering /home/omero/workspace/OMERO-build/src/components/tools...
10:20:1810:20:18dist:
10:20:18Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
10:20:18Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
10:20:18Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
10:20:18Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.10.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
10:20:18Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
10:20:18Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
10:20:18Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
10:20:18Entering /home/omero/workspace/OMERO-build/src/components/tests...
10:20:18Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
10:20:1810:20:18copy-licenses:
10:20:18Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
10:20:18Created dir: /home/omero/workspace/OMERO-build/src/dist/share
10:20:18Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
10:20:1810:20:18copy-history:
10:20:18Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
10:20:1810:20:18copy-etc:
10:20:18Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
10:20:18Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
10:20:1810:20:18copy-sql:
10:20:18Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
10:20:2210:20:22copy-server:
10:20:22 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
10:20:2210:20:22copy-client:
10:20:22Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
10:20:23 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
10:20:2310:20:23update-version:
10:20:23Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
10:20:2310:20:23create-workdirs:
10:20:23Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
10:20:23Created dir: /home/omero/workspace/OMERO-build/src/dist/var
10:20:23Created dir: /home/omero/workspace/OMERO-build/src/dist/var/tmp
10:20:2310:20:23copy-luts:
10:20:23Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
10:20:23Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
10:20:2310:20:23test-compile:
10:20:23:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:20:23Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
10:20:23Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:20:23Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
10:20:23Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:20:23Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
10:20:23Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
10:20:23Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:20:2410:20:24testng-init:
10:20:24:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:20:24:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:20:2610:20:26,371 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
10:20:2610:20:26,373 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3109f8ae - No custom configurators were discovered as a service.
10:20:2610:20:26,373 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3109f8ae - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
10:20:2610:20:26,376 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3109f8ae - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
10:20:2610:20:26,376 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
10:20:2610:20:26,376 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
10:20:2610:20:26,377 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3109f8ae - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
10:20:2610:20:26,377 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3109f8ae - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
10:20:2610:20:26,378 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3109f8ae - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
10:20:2610:20:26,378 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
10:20:2610:20:26,379 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
10:20:2610:20:26,379 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1818c0a0 - Resource [logback.xml] occurs multiple times on the classpath.
10:20:2610:20:26,379 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1818c0a0 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
10:20:2610:20:26,379 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@1818c0a0 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
10:20:2610:20:26,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
10:20:2610:20:26,577 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
10:20:2610:20:26,594 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
10:20:2610:20:26,596 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@646a5e76 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
10:20:2610:20:26,596 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@646a5e76 - Please move "immediateFlush" property into the enclosing appender.
10:20:2610:20:26,651 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@646a5e76 - Setting the "immediateFlush" property of the enclosing appender to true
10:20:2610:20:26,652 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
10:20:2610:20:26,652 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
10:20:2610:20:26,652 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
10:20:2610:20:26,652 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
10:20:2610:20:26,652 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
10:20:2610:20:26,652 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
10:20:2610:20:26,653 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2656db92 - End of configuration.
10:20:2610:20:26,654 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@58649b7e - Registering current configuration as safe fallback point
10:20:2610:20:26,654 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3109f8ae - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 276 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
10:20:2610:20:26lifecycle.test-compile:
10:20:26Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
10:20:26Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
10:20:27warning: [options] bootstrap class path not set in conjunction with -source 8
10:20:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:20:28import omero.grid.RawAccessRequest;
10:20:28 ^
10:20:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:20:28import omero.grid.RawAccessRequest;
10:20:28 ^
10:20:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:20:28import omero.grid.RawAccessRequest;
10:20:28 ^
10:20:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
10:20:28import omero.model.ImportJob;
10:20:28 ^
10:20:28/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
10:20:28import omero.model.ImportJobI;
10:20:28 ^
10:20:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
10:20:29 IObject link = (IObject) linkClass.newInstance();
10:20:29 ^
10:20:29 where T is a type-variable:
10:20:29 T extends Object declared in class Class
10:20:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
10:20:29 T copy = (T) obj.getClass().newInstance();
10:20:29 ^
10:20:29 where T is a type-variable:
10:20:29 T extends Object declared in class Class
10:20:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:20:29 RawAccessRequest raw = new RawAccessRequest();
10:20:29 ^
10:20:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:20:29 RawAccessRequest raw = new RawAccessRequest();
10:20:29 ^
10:20:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:20:29 raw.repoUuid = legacy.root().getHash().getValue();
10:20:29 ^
10:20:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
10:20:29 raw.command = "rm";
10:20:29 ^
10:20:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
10:20:29 raw.args = Arrays.asList(path);
10:20:29 ^
10:20:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
10:20:29 final IObject link = linkClass.newInstance();
10:20:29 ^
10:20:29 where T is a type-variable:
10:20:29 T extends Object declared in class Class
10:20:29/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
10:20:29 originalLink.setChild(annotationClass.newInstance());
10:20:29 ^
10:20:29 where T is a type-variable:
10:20:29 T extends Object declared in class Class
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:20:30 RoiResult r = svc.findByImage(id, new RoiOptions());
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:20:30 final RawAccessRequest request = new RawAccessRequest();
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:20:30 final RawAccessRequest request = new RawAccessRequest();
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:20:30 request.repoUuid = repo.root().getHash().getValue();
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
10:20:30 request.command = "exists";
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
10:20:30 request.args = Collections.singletonList(dirPath);
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:20:30 final RawAccessRequest request = new RawAccessRequest();
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
10:20:30 final RawAccessRequest request = new RawAccessRequest();
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
10:20:30 request.repoUuid = repo.root().getHash().getValue();
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
10:20:30 request.command = "exists";
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
10:20:30 request.args = Collections.singletonList(dirName);
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
10:20:30 final ImportJob importJob = new ImportJobI();
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
10:20:30 final ImportJob importJob = new ImportJobI();
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
10:20:30 importJob.setImageName(omero.rtypes.rstring(name));
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
10:20:30 importJob.setImageDescription(omero.rtypes.rstring(desc));
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
10:20:30 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
10:20:30 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
10:20:30 final String savedName = sent.getImageName().getValue().toString();
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
10:20:30 final String savedDesc = sent.getImageDescription().getValue().toString();
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
10:20:30 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
10:20:30 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
10:20:30 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
10:20:30 ^
10:20:30/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
10:20:30 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
10:20:30 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 RoiResult r = svc.findByImage(image.getId().getValue(),
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
10:20:31 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
10:20:31 table = svc.getTable(f.getId().getValue());
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 RoiResult r = svc.findByImage(image.getId().getValue(),
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
10:20:31 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
10:20:31 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Long(long) in Long has been deprecated and marked for removal
10:20:31 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
10:20:31 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
10:20:31 svc.getShapeStatsRestricted(
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
10:20:31 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:20:31 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:20:31 request.typesToIgnore = Collections.singletonList("TagAnnotation");
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:20:31 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:20:31 request.typesToIgnore = Collections.singletonList("Annotation");
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
10:20:31 request.typesToIgnore = Collections.singletonList("Annotation");
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:20:31 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:20:31 p2.setRelatedTo(p1);
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:20:31 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:20:31 pixels1.setRelatedTo(pixels2);
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:20:31 Pixels pixels = pixels1.getRelatedTo();
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:20:31 Assert.assertNull(pixels1.getRelatedTo());
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
10:20:31 pixels1.setRelatedTo(pixels2);
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:20:31 Pixels pixels = pixels1.getRelatedTo();
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
10:20:31 Assert.assertNull(pixels1.getRelatedTo());
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
10:20:31 ^
10:20:31/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
10:20:31 l = svc.getRoiMeasurements(image.getId().getValue(), options);
10:20:31 ^
10:20:31Note: Some input files use unchecked or unsafe operations.
10:20:31Note: Recompile with -Xlint:unchecked for details.
10:20:3188 warnings
10:20:31Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_1991843601.tmp
10:20:31Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
10:20:31:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:20:31:: delivering :: omero#OmeroJava-test;working@26c1bc7ef6b1 :: 5.6.3-594-f2a9784d29-ice36-b142 :: integration :: Fri May 01 10:20:23 UTC 2026
10:20:31 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
10:20:31:: publishing :: omero#OmeroJava-test
10:20:31 published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-594-f2a9784d29-ice36-b142.jar
10:20:31 published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-594-f2a9784d29-ice36-b142.xml
10:20:3110:20:31build-eclipse:
10:20:31No sub-builds to iterate on
10:20:31Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
10:20:3210:20:32retrieve:
10:20:32:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
10:20:32:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
10:20:3410:20:34prepare:
10:20:34Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
10:20:3810:20:38release-clients:
10:20:38Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-594-f2a9784d29-ice36-b142.zip
10:20:4310:20:43release-zip:
10:20:43Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-594-f2a9784d29-ice36-b142.zip
10:20:5310:20:53BUILD SUCCESSFUL
10:20:53Total time: 1 minute 6 seconds
10:20:53++ '[' -d .git ']'
10:20:53++ python3 ./build.py release-src
10:20:53Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
10:20:5410:20:54release-src-git:
10:20:54Releasing openmicroscopy-5.6.3-594-f2a9784d29-ice36-b142
10:20:55 - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-594-f2a9784d29-ice36-b142.zip
10:20:55 - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-594-f2a9784d29-ice36-b142-base.zip
10:20:5710:20:57BUILD SUCCESSFUL
10:20:57Total time: 3 seconds
10:20:57++ echo BUILD_NUMBER=142
10:20:57++ echo OMERO_BRANCH=merge_ci
10:20:57++ git_info
10:20:57+++ git rev-parse HEAD
10:20:57++ HEAD=f2a9784d2954df2c015a30a229d206279984e7ae
10:20:57++ git log --max-count=1 f2a9784d2954df2c015a30a229d206279984e7ae
10:20:57++ env
10:20:57++ sort
10:20:57Archiving artifacts
10:21:13Finished: SUCCESS
