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01:10:27 Started by upstream project "Trigger" build number 351
01:10:27 originally caused by:
01:10:27  Started by timer
01:10:27 Running as SYSTEM
01:10:27 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
01:10:27 The recommended git tool is: NONE
01:10:27 No credentials specified
01:10:27  > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
01:10:27 Fetching changes from the remote Git repository
01:10:27  > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
01:10:27 Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git
01:10:27  > git --version # timeout=10
01:10:27  > git --version # 'git version 2.43.5'
01:10:27  > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
01:10:29  > git rev-parse origin/merge_ci^{commit} # timeout=10
01:10:29 Checking out Revision 9c41d33194f62c19f80225275aae2a736d5c32a0 (origin/merge_ci)
01:10:29  > git config core.sparsecheckout # timeout=10
01:10:29  > git checkout -f 9c41d33194f62c19f80225275aae2a736d5c32a0 # timeout=10
01:10:29 Commit message: "Add version.properties to etc/omero.properties"
01:10:29  > git rev-list --no-walk aae3ffa3ee68467ad5bee0ed062d740da9a9ba99 # timeout=10
01:10:29 Cleaning workspace
01:10:29  > git rev-parse --verify HEAD # timeout=10
01:10:29 Resetting working tree
01:10:29  > git reset --hard # timeout=10
01:10:29  > git clean -fdx # timeout=10
01:10:29 Copied 6 artifacts from "OMERO-python-superbuild-build" build number 296
01:10:29 [OMERO-build] $ /bin/bash -xe /tmp/jenkins5630025423629390113.sh
01:10:29 + mv omero-scripts/dist/omero_scripts-5.9.1.dev0.tar.gz .
01:10:29 + cd src
01:10:29 + export OMERO_BRANCH=merge_ci
01:10:29 + OMERO_BRANCH=merge_ci
01:10:29 + OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
01:10:29 + source /home/omero/settings.env
01:10:29 ++ OMERO_DB_HOST=pg
01:10:29 ++ OMERO_DB_USER=postgres
01:10:29 ++ OMERO_DB_PASS=
01:10:29 ++ OMERO_ROOT_PASS=omero
01:10:29 ++ OMERO_DATA_DIR=/OMERO
01:10:29 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
01:10:29 + python3 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
01:10:33 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl
01:10:35 Collecting zeroc-ice==3.6.5
01:10:36   Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
01:10:38 WARNING: You are using pip version 21.2.3; however, version 24.3.1 is available.
01:10:38 You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
01:10:38 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U setuptools omero-py
01:10:39 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (75.8.0)
01:10:39 Requirement already satisfied: omero-py in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (5.19.6)
01:10:40 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.8.2)
01:10:40 Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (10.2.0)
01:10:40 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (3.6.5)
01:10:40 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.4.4)
01:10:40 Requirement already satisfied: future in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.0.0)
01:10:40 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (6.0.1)
01:10:40 Requirement already satisfied: numpy<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.4)
01:10:40 Requirement already satisfied: urllib3<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.18)
01:10:40 Requirement already satisfied: requests in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.31.0)
01:10:40 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (2024.2.2)
01:10:40 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.6)
01:10:40 Requirement already satisfied: charset-normalizer<4,>=2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.3.2)
01:10:40 WARNING: You are using pip version 21.2.3; however, version 24.3.1 is available.
01:10:40 You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
01:10:40 + source docs/hudson/OMERO.sh
01:10:40 ++ set -e
01:10:40 ++ set -u
01:10:40 ++ set -x
01:10:40 ++ source docs/hudson/functions.sh
01:10:40 ++ echo Building merge_ci
01:10:40 Building merge_ci
01:10:40 ++ python3 ./build.py build-dev release-all
01:10:40 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
01:10:41 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
01:10:43 
01:10:43 check-ivy:
01:10:43 Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
01:10:43 Created dir: /home/omero/workspace/OMERO-build/src/target
01:10:44 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:10:44 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:10:45 
01:10:45 build-scons:
01:10:45 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
01:10:45 No sub-builds to iterate on
01:10:46 Entering /home/omero/workspace/OMERO-build/src/components/tools...
01:10:46 
01:10:46 buildlist:
01:10:46 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:10:46 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:10:46 
01:10:46 clean:
01:10:46 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:10:46 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:10:47 
01:10:47 python-clean:
01:10:47 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:10:47 /usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-9c41d33194-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:10:47   warnings.warn(
01:10:47 running clean
01:10:47 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
01:10:47 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:10:47 
01:10:47 python-clean:
01:10:47 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:10:47 /usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-9c41d33194-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:10:47   warnings.warn(
01:10:47 running clean
01:10:47 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
01:10:47 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:10:47 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:10:47 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:10:47 
01:10:47 python-clean:
01:10:47 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:10:47 /usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-9c41d33194-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:10:47   warnings.warn(
01:10:47 running clean
01:10:47 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
01:10:47 Deleting directory /home/omero/workspace/OMERO-build/src/target
01:10:48 
01:10:48 build-scons:
01:10:48 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
01:10:48 
01:10:48 build:
01:10:48 No sub-builds to iterate on
01:10:48 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:10:48 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:10:48 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:10:48 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:10:48 
01:10:48 tools-init:
01:10:48 no-op
01:10:48 
01:10:48 retrieve:
01:10:48 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:10:48 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:10:49 WARNING: An illegal reflective access operation has occurred
01:10:49 WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-build/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator
01:10:49 WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator
01:10:49 WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
01:10:49 WARNING: All illegal access operations will be denied in a future release
01:11:15 
01:11:15 prepare:
01:11:15 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
01:11:15 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
01:11:15 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
01:11:15 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:11:15 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:11:15 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:11:15 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
01:11:15 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:11:15 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:11:15 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:11:15 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:11:15 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:11:15 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:11:15 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:11:15 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:11:15 
01:11:15 pre-compile:
01:11:15 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:11:15 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:11:15 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:11:15 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:11:15 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:11:15 
01:11:15 compile:
01:11:15 no-op
01:11:16 
01:11:16 package:
01:11:16 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
01:11:16 
01:11:16 install:
01:11:16 :: delivering :: omero#omero_client;working@78531952a60e :: 5.6.3-531-9c41d33194-ice36 :: integration :: Sat Jan 25 01:10:48 UTC 2025
01:11:16 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
01:11:16 :: publishing :: omero#omero_client
01:11:16 	published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-531-9c41d33194-ice36/omero_client-5.6.3-531-9c41d33194-ice36.jar
01:11:16 	published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-531-9c41d33194-ice36/omero_client-5.6.3-531-9c41d33194-ice36.xml
01:11:16 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:11:16 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:11:16 
01:11:16 retrieve:
01:11:16 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:11:16 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:11:17 Entering /home/omero/workspace/OMERO-build/src/components/tools...
01:11:17 
01:11:17 dist:
01:11:17 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
01:11:17 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
01:11:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
01:11:17 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.9.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
01:11:17 Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
01:11:17 Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
01:11:17 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
01:11:17 Entering /home/omero/workspace/OMERO-build/src/components/tests...
01:11:17 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
01:11:17 
01:11:17 copy-licenses:
01:11:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
01:11:17 Created dir: /home/omero/workspace/OMERO-build/src/dist/share
01:11:17 Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
01:11:18 
01:11:18 copy-history:
01:11:18 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
01:11:18 
01:11:18 copy-etc:
01:11:18 Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
01:11:18 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
01:11:18 
01:11:18 copy-sql:
01:11:18 Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
01:11:28 
01:11:28 copy-server:
01:11:28 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.0.11 won
01:11:28 
01:11:28 copy-client:
01:11:28 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
01:11:29 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.0.11 won
01:11:29 
01:11:29 update-version:
01:11:29 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
01:11:29 
01:11:29 create-workdirs:
01:11:29 Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
01:11:29 Created dir: /home/omero/workspace/OMERO-build/src/dist/var
01:11:29 
01:11:29 copy-luts:
01:11:29 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
01:11:29 Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
01:11:30 
01:11:30 test-compile:
01:11:30 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:11:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:11:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:11:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:11:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:11:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:11:30 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
01:11:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:11:30 
01:11:30 testng-init:
01:11:30 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:11:30 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:11:34 01:11:34,451 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
01:11:34 01:11:34,454 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - No custom configurators were discovered as a service.
01:11:34 01:11:34,454 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
01:11:34 01:11:34,458 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
01:11:34 01:11:34,459 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
01:11:34 01:11:34,459 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
01:11:34 01:11:34,460 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
01:11:34 01:11:34,460 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
01:11:34 01:11:34,464 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
01:11:34 01:11:34,465 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
01:11:34 01:11:34,465 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
01:11:34 01:11:34,467 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@591ad4b3 - Resource [logback.xml] occurs multiple times on the classpath.
01:11:34 01:11:34,467 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@591ad4b3 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
01:11:34 01:11:34,467 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@591ad4b3 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
01:11:34 01:11:34,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
01:11:34 01:11:34,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
01:11:34 01:11:34,707 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
01:11:34 01:11:34,709 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@70bfc7d5 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
01:11:34 01:11:34,709 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@70bfc7d5 - Please move "immediateFlush" property into the enclosing appender.
01:11:34 01:11:34,773 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@70bfc7d5 - Setting the "immediateFlush" property of the enclosing appender to true
01:11:34 01:11:34,774 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
01:11:34 01:11:34,774 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
01:11:34 01:11:34,774 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
01:11:34 01:11:34,774 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
01:11:34 01:11:34,774 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
01:11:34 01:11:34,774 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
01:11:34 01:11:34,775 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2ea6687b - End of configuration.
01:11:34 01:11:34,777 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5fdd9b96 - Registering current configuration as safe fallback point
01:11:34 01:11:34,777 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 313 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
01:11:34 
01:11:34 lifecycle.test-compile:
01:11:34 Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:11:35 Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:11:35 warning: [options] bootstrap class path not set in conjunction with -source 8
01:11:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:39 import omero.grid.RawAccessRequest;
01:11:39                  ^
01:11:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:40 import omero.grid.RawAccessRequest;
01:11:40                  ^
01:11:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:40 import omero.grid.RawAccessRequest;
01:11:40                  ^
01:11:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:40 import omero.model.ImportJob;
01:11:40                   ^
01:11:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:11:40 import omero.model.ImportJobI;
01:11:40                   ^
01:11:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
01:11:41         IObject link = (IObject) linkClass.newInstance();
01:11:41                                           ^
01:11:41   where T is a type-variable:
01:11:41     T extends Object declared in class Class
01:11:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
01:11:41         T copy = (T) obj.getClass().newInstance();
01:11:41                                    ^
01:11:41   where T is a type-variable:
01:11:41     T extends Object declared in class Class
01:11:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:41         RawAccessRequest raw = new RawAccessRequest();
01:11:41         ^
01:11:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:41         RawAccessRequest raw = new RawAccessRequest();
01:11:41                                    ^
01:11:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:11:41         raw.repoUuid = legacy.root().getHash().getValue();
01:11:41            ^
01:11:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
01:11:41         raw.command = "rm";
01:11:41            ^
01:11:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
01:11:41         raw.args = Arrays.asList(path);
01:11:41            ^
01:11:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
01:11:41         final IObject link = linkClass.newInstance();
01:11:41                                       ^
01:11:41   where T is a type-variable:
01:11:41     T extends Object declared in class Class
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
01:11:42             originalLink.setChild(annotationClass.newInstance());
01:11:42                                                  ^
01:11:42   where T is a type-variable:
01:11:42     T extends Object declared in class Class
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:11:42         RoiResult r = svc.findByImage(id, new RoiOptions());
01:11:42                          ^
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:42         final RawAccessRequest request = new RawAccessRequest();
01:11:42               ^
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:42         final RawAccessRequest request = new RawAccessRequest();
01:11:42                                              ^
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:11:42         request.repoUuid = repo.root().getHash().getValue();
01:11:42                ^
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
01:11:42         request.command = "exists";
01:11:42                ^
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
01:11:42         request.args = Collections.singletonList(dirPath);
01:11:42                ^
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:42         final RawAccessRequest request = new RawAccessRequest();
01:11:42               ^
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:42         final RawAccessRequest request = new RawAccessRequest();
01:11:42                                              ^
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:11:42         request.repoUuid = repo.root().getHash().getValue();
01:11:42                ^
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
01:11:42         request.command = "exists";
01:11:42                ^
01:11:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
01:11:42         request.args = Collections.singletonList(dirName);
01:11:42                ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:43         final ImportJob importJob = new ImportJobI();
01:11:43               ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:11:43         final ImportJob importJob = new ImportJobI();
01:11:43                                         ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
01:11:43         importJob.setImageName(omero.rtypes.rstring(name));
01:11:43                  ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
01:11:43         importJob.setImageDescription(omero.rtypes.rstring(desc));
01:11:43                  ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:43         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:11:43         ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:43         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:11:43                           ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:11:43         final String savedName = sent.getImageName().getValue().toString();
01:11:43                                      ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:11:43         final String savedDesc = sent.getImageDescription().getValue().toString();
01:11:43                                      ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:43         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:11:43               ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:43         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:11:43                                               ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:11:43         final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
01:11:43                                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:11:43         final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
01:11:43                                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:11:43         RoiResult r = svc.findByImage(image.getId().getValue(),
01:11:43                          ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:43         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:11:43                                 ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:43         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:11:43                ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:43         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:11:43                ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:43         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:11:43                                 ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
01:11:43         Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
01:11:43                                          ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:43         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:11:43                                 ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
01:11:43         table = svc.getTable(f.getId().getValue());
01:11:43                    ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:11:43         RoiResult r = svc.findByImage(image.getId().getValue(),
01:11:43                          ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:11:43         r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
01:11:43                ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:11:43         r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
01:11:43                ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:11:43         r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
01:11:43                ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:11:43         r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
01:11:43                ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:11:43                   ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:11:43                                   ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:11:43                                    ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:11:43                                                    ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Long(long) in Long has been deprecated
01:11:43             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:11:43                                       ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:11:43                                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:11:43                                                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:11:43                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:11:43                                                         ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:11:43                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:11:43                                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:11:43                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:11:43                                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:11:43                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:11:43                                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:11:43                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:43         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:11:43                                                        ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:11:43                 svc.getShapeStatsRestricted(
01:11:43                    ^
01:11:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:11:43         final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
01:11:43                                        ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:11:44         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:11:44                                      ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:11:44         request.typesToIgnore = Collections.singletonList("TagAnnotation");
01:11:44                ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:11:44         request.typesToIgnore = Collections.singletonList("IAnnotationLink");
01:11:44                ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:11:44         request.typesToIgnore = Collections.singletonList("Annotation");
01:11:44                ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:11:44                     request.typesToIgnore = Collections.singletonList("Annotation");
01:11:44                            ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:11:44         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:11:44                                      ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:11:44         p2.setRelatedTo(p1);
01:11:44           ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:11:44         Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
01:11:44                                           ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:11:44         pixels1.setRelatedTo(pixels2);
01:11:44                ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:11:44         Pixels pixels = pixels1.getRelatedTo();
01:11:44                                ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:11:44         Assert.assertNull(pixels1.getRelatedTo());
01:11:44                                  ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:11:44         pixels1.setRelatedTo(pixels2);
01:11:44                ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:11:44         Pixels pixels = pixels1.getRelatedTo();
01:11:44                                ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:11:44         Assert.assertNull(pixels1.getRelatedTo());
01:11:44                                  ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:44         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:11:44                                 ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:44         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:11:44                ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:44         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:11:44                                 ^
01:11:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:44         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:11:44                ^
01:11:44 Note: Some input files use unchecked or unsafe operations.
01:11:44 Note: Recompile with -Xlint:unchecked for details.
01:11:44 88 warnings
01:11:44 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_162540977.tmp
01:11:44 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
01:11:44 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:11:45 :: delivering :: omero#OmeroJava-test;working@78531952a60e :: 5.6.3-531-9c41d33194-ice36 :: integration :: Sat Jan 25 01:11:30 UTC 2025
01:11:45 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
01:11:45 :: publishing :: omero#OmeroJava-test
01:11:45 	published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-531-9c41d33194-ice36.jar
01:11:45 	published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-531-9c41d33194-ice36.xml
01:11:45 
01:11:45 build-eclipse:
01:11:45 No sub-builds to iterate on
01:11:45 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:11:45 
01:11:45 retrieve:
01:11:45 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:11:45 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:11:47 
01:11:47 prepare:
01:11:47 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
01:11:49 
01:11:49 release-clients:
01:11:49 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-531-9c41d33194-ice36.zip
01:11:55 
01:11:55 release-zip:
01:11:55 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-531-9c41d33194-ice36.zip
01:12:07 
01:12:07 BUILD SUCCESSFUL
01:12:07 Total time: 1 minute 26 seconds
01:12:08 ++ '[' -d .git ']'
01:12:08 ++ python3 ./build.py release-src
01:12:08 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
01:12:08 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
01:12:08 
01:12:08 release-src-git:
01:12:08 Releasing openmicroscopy-5.6.3-531-9c41d33194-ice36
01:12:10   - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-531-9c41d33194-ice36.zip
01:12:10   - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-531-9c41d33194-ice36-base.zip
01:12:12 
01:12:12 BUILD SUCCESSFUL
01:12:12 Total time: 3 seconds
01:12:12 ++ echo BUILD_NUMBER=300
01:12:12 ++ echo OMERO_BRANCH=merge_ci
01:12:12 ++ git_info
01:12:12 +++ git rev-parse HEAD
01:12:12 ++ HEAD=9c41d33194f62c19f80225275aae2a736d5c32a0
01:12:12 ++ git log --max-count=1 9c41d33194f62c19f80225275aae2a736d5c32a0
01:12:12 ++ env
01:12:12 ++ sort
01:12:12 Archiving artifacts
01:12:40 Finished: SUCCESS