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01:10:06 Started by upstream project "Trigger" build number 352
01:10:06 originally caused by:
01:10:06  Started by timer
01:10:06 Running as SYSTEM
01:10:06 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
01:10:06 The recommended git tool is: NONE
01:10:06 No credentials specified
01:10:06  > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
01:10:06 Fetching changes from the remote Git repository
01:10:06  > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
01:10:06 Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git
01:10:06  > git --version # timeout=10
01:10:06  > git --version # 'git version 2.43.5'
01:10:06  > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
01:10:14  > git rev-parse origin/merge_ci^{commit} # timeout=10
01:10:14 Checking out Revision d65edd4968e73438f406ccf5a279f7cf59dc5266 (origin/merge_ci)
01:10:14  > git config core.sparsecheckout # timeout=10
01:10:14  > git checkout -f d65edd4968e73438f406ccf5a279f7cf59dc5266 # timeout=10
01:10:14 Commit message: "Add version.properties to etc/omero.properties"
01:10:14  > git rev-list --no-walk 9c41d33194f62c19f80225275aae2a736d5c32a0 # timeout=10
01:10:14 Cleaning workspace
01:10:14  > git rev-parse --verify HEAD # timeout=10
01:10:14 Resetting working tree
01:10:14  > git reset --hard # timeout=10
01:10:14  > git clean -fdx # timeout=10
01:10:15 Copied 6 artifacts from "OMERO-python-superbuild-build" build number 297
01:10:15 [OMERO-build] $ /bin/bash -xe /tmp/jenkins8538095898696248226.sh
01:10:15 + mv omero-scripts/dist/omero_scripts-5.9.1.dev0.tar.gz .
01:10:15 + cd src
01:10:15 + export OMERO_BRANCH=merge_ci
01:10:15 + OMERO_BRANCH=merge_ci
01:10:15 + OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
01:10:15 + source /home/omero/settings.env
01:10:15 ++ OMERO_DB_HOST=pg
01:10:15 ++ OMERO_DB_USER=postgres
01:10:15 ++ OMERO_DB_PASS=
01:10:15 ++ OMERO_ROOT_PASS=omero
01:10:15 ++ OMERO_DATA_DIR=/OMERO
01:10:15 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
01:10:15 + python3 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
01:10:19 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl
01:10:20 Collecting zeroc-ice==3.6.5
01:10:21   Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
01:10:23 WARNING: You are using pip version 21.2.3; however, version 24.3.1 is available.
01:10:23 You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
01:10:23 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U setuptools omero-py
01:10:23 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (75.8.0)
01:10:24 Requirement already satisfied: omero-py in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (5.19.6)
01:10:24 Requirement already satisfied: requests in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.31.0)
01:10:24 Requirement already satisfied: future in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.0.0)
01:10:24 Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (10.2.0)
01:10:24 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (6.0.1)
01:10:24 Requirement already satisfied: numpy<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.4)
01:10:24 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (3.6.5)
01:10:24 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.4.4)
01:10:24 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.8.2)
01:10:24 Requirement already satisfied: urllib3<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.18)
01:10:24 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.6)
01:10:24 Requirement already satisfied: charset-normalizer<4,>=2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.3.2)
01:10:24 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (2024.2.2)
01:10:24 WARNING: You are using pip version 21.2.3; however, version 24.3.1 is available.
01:10:24 You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
01:10:24 + source docs/hudson/OMERO.sh
01:10:24 ++ set -e
01:10:24 ++ set -u
01:10:24 ++ set -x
01:10:24 ++ source docs/hudson/functions.sh
01:10:24 ++ echo Building merge_ci
01:10:24 Building merge_ci
01:10:24 ++ python3 ./build.py build-dev release-all
01:10:24 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
01:10:25 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
01:10:26 
01:10:26 check-ivy:
01:10:26 Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
01:10:26 Created dir: /home/omero/workspace/OMERO-build/src/target
01:10:27 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:10:27 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:10:28 
01:10:28 build-scons:
01:10:28 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
01:10:28 No sub-builds to iterate on
01:10:29 Entering /home/omero/workspace/OMERO-build/src/components/tools...
01:10:29 
01:10:29 buildlist:
01:10:29 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:10:29 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:10:29 
01:10:29 clean:
01:10:29 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:10:29 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:10:30 
01:10:30 python-clean:
01:10:30 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:10:30 /usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-d65edd4968-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:10:30   warnings.warn(
01:10:30 running clean
01:10:30 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
01:10:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:10:30 
01:10:30 python-clean:
01:10:30 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:10:30 /usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-d65edd4968-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:10:30   warnings.warn(
01:10:30 running clean
01:10:30 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
01:10:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:10:31 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:10:31 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:10:31 
01:10:31 python-clean:
01:10:31 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:10:31 /usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-531-d65edd4968-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:10:31   warnings.warn(
01:10:31 running clean
01:10:31 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
01:10:31 Deleting directory /home/omero/workspace/OMERO-build/src/target
01:10:31 
01:10:31 build-scons:
01:10:31 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
01:10:31 
01:10:31 build:
01:10:31 No sub-builds to iterate on
01:10:31 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:10:31 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:10:31 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:10:31 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:10:31 
01:10:31 tools-init:
01:10:31 no-op
01:10:31 
01:10:31 retrieve:
01:10:31 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:10:31 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:10:32 WARNING: An illegal reflective access operation has occurred
01:10:32 WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-build/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator
01:10:32 WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator
01:10:32 WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
01:10:32 WARNING: All illegal access operations will be denied in a future release
01:10:50 
01:10:50 prepare:
01:10:50 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
01:10:50 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
01:10:50 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
01:10:50 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:10:50 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:10:50 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:10:50 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
01:10:50 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:10:50 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:10:50 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:10:50 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:10:50 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:10:50 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:10:50 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:10:50 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:10:50 
01:10:50 pre-compile:
01:10:50 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:10:50 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:10:51 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:10:51 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:10:51 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:10:51 
01:10:51 compile:
01:10:51 no-op
01:10:51 
01:10:51 package:
01:10:51 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
01:10:51 
01:10:51 install:
01:10:51 :: delivering :: omero#omero_client;working@78531952a60e :: 5.6.3-531-d65edd4968-ice36 :: integration :: Sun Jan 26 01:10:31 UTC 2025
01:10:51 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
01:10:51 :: publishing :: omero#omero_client
01:10:51 	published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-531-d65edd4968-ice36/omero_client-5.6.3-531-d65edd4968-ice36.jar
01:10:51 	published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-531-d65edd4968-ice36/omero_client-5.6.3-531-d65edd4968-ice36.xml
01:10:51 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:10:51 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:10:52 
01:10:52 retrieve:
01:10:52 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:10:52 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:10:52 Entering /home/omero/workspace/OMERO-build/src/components/tools...
01:10:52 
01:10:52 dist:
01:10:52 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
01:10:52 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
01:10:52 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
01:10:52 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.9.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
01:10:52 Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
01:10:52 Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
01:10:52 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
01:10:52 Entering /home/omero/workspace/OMERO-build/src/components/tests...
01:10:52 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
01:10:52 
01:10:52 copy-licenses:
01:10:52 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
01:10:52 Created dir: /home/omero/workspace/OMERO-build/src/dist/share
01:10:52 Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
01:10:53 
01:10:53 copy-history:
01:10:53 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
01:10:53 
01:10:53 copy-etc:
01:10:53 Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
01:10:54 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
01:10:54 
01:10:54 copy-sql:
01:10:54 Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
01:11:05 
01:11:05 copy-server:
01:11:05 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.0.11 won
01:11:05 
01:11:05 copy-client:
01:11:05 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
01:11:07 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.0.11 won
01:11:07 
01:11:07 update-version:
01:11:07 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
01:11:07 
01:11:07 create-workdirs:
01:11:07 Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
01:11:07 Created dir: /home/omero/workspace/OMERO-build/src/dist/var
01:11:07 
01:11:07 copy-luts:
01:11:07 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
01:11:07 Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
01:11:08 
01:11:08 test-compile:
01:11:08 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:11:08 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:11:08 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:11:08 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:11:08 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:11:08 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:11:08 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
01:11:08 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:11:08 
01:11:08 testng-init:
01:11:08 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:11:08 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:11:13 01:11:12,838 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
01:11:13 01:11:12,842 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - No custom configurators were discovered as a service.
01:11:13 01:11:12,843 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
01:11:13 01:11:12,848 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
01:11:13 01:11:12,849 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
01:11:13 01:11:12,850 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
01:11:13 01:11:12,851 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 3 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
01:11:13 01:11:12,851 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
01:11:13 01:11:12,854 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
01:11:13 01:11:12,854 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
01:11:13 01:11:12,855 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
01:11:13 01:11:12,856 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@591ad4b3 - Resource [logback.xml] occurs multiple times on the classpath.
01:11:13 01:11:12,856 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@591ad4b3 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
01:11:13 01:11:12,856 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@591ad4b3 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
01:11:13 01:11:13,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
01:11:13 01:11:13,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
01:11:13 01:11:13,116 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
01:11:13 01:11:13,119 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@70bfc7d5 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
01:11:13 01:11:13,119 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@70bfc7d5 - Please move "immediateFlush" property into the enclosing appender.
01:11:13 01:11:13,213 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@70bfc7d5 - Setting the "immediateFlush" property of the enclosing appender to true
01:11:13 01:11:13,214 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
01:11:13 01:11:13,214 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
01:11:13 01:11:13,214 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
01:11:13 01:11:13,214 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
01:11:13 01:11:13,214 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
01:11:13 01:11:13,214 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
01:11:13 01:11:13,216 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2ea6687b - End of configuration.
01:11:13 01:11:13,218 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5fdd9b96 - Registering current configuration as safe fallback point
01:11:13 01:11:13,218 |-INFO in ch.qos.logback.classic.util.ContextInitializer@17acd4c5 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 364 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
01:11:13 
01:11:13 lifecycle.test-compile:
01:11:13 Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:11:13 Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:11:13 warning: [options] bootstrap class path not set in conjunction with -source 8
01:11:17 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:17 import omero.grid.RawAccessRequest;
01:11:17                  ^
01:11:18 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:18 import omero.grid.RawAccessRequest;
01:11:18                  ^
01:11:18 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:18 import omero.grid.RawAccessRequest;
01:11:18                  ^
01:11:18 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:18 import omero.model.ImportJob;
01:11:18                   ^
01:11:18 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:11:18 import omero.model.ImportJobI;
01:11:18                   ^
01:11:19 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
01:11:19         IObject link = (IObject) linkClass.newInstance();
01:11:19                                           ^
01:11:19   where T is a type-variable:
01:11:19     T extends Object declared in class Class
01:11:19 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
01:11:19         T copy = (T) obj.getClass().newInstance();
01:11:19                                    ^
01:11:19   where T is a type-variable:
01:11:19     T extends Object declared in class Class
01:11:19 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:19         RawAccessRequest raw = new RawAccessRequest();
01:11:19         ^
01:11:19 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:19         RawAccessRequest raw = new RawAccessRequest();
01:11:19                                    ^
01:11:19 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:11:19         raw.repoUuid = legacy.root().getHash().getValue();
01:11:19            ^
01:11:19 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
01:11:19         raw.command = "rm";
01:11:19            ^
01:11:19 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
01:11:19         raw.args = Arrays.asList(path);
01:11:19            ^
01:11:19 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
01:11:19         final IObject link = linkClass.newInstance();
01:11:19                                       ^
01:11:19   where T is a type-variable:
01:11:19     T extends Object declared in class Class
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
01:11:20             originalLink.setChild(annotationClass.newInstance());
01:11:20                                                  ^
01:11:20   where T is a type-variable:
01:11:20     T extends Object declared in class Class
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:11:20         RoiResult r = svc.findByImage(id, new RoiOptions());
01:11:20                          ^
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:20         final RawAccessRequest request = new RawAccessRequest();
01:11:20               ^
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:20         final RawAccessRequest request = new RawAccessRequest();
01:11:20                                              ^
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:11:20         request.repoUuid = repo.root().getHash().getValue();
01:11:20                ^
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
01:11:20         request.command = "exists";
01:11:20                ^
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
01:11:20         request.args = Collections.singletonList(dirPath);
01:11:20                ^
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:20         final RawAccessRequest request = new RawAccessRequest();
01:11:20               ^
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:11:20         final RawAccessRequest request = new RawAccessRequest();
01:11:20                                              ^
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:11:20         request.repoUuid = repo.root().getHash().getValue();
01:11:20                ^
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
01:11:20         request.command = "exists";
01:11:20                ^
01:11:20 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
01:11:20         request.args = Collections.singletonList(dirName);
01:11:20                ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:21         final ImportJob importJob = new ImportJobI();
01:11:21               ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:11:21         final ImportJob importJob = new ImportJobI();
01:11:21                                         ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
01:11:21         importJob.setImageName(omero.rtypes.rstring(name));
01:11:21                  ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
01:11:21         importJob.setImageDescription(omero.rtypes.rstring(desc));
01:11:21                  ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:21         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:11:21         ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:21         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:11:21                           ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:11:21         final String savedName = sent.getImageName().getValue().toString();
01:11:21                                      ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:11:21         final String savedDesc = sent.getImageDescription().getValue().toString();
01:11:21                                      ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:21         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:11:21               ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:11:21         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:11:21                                               ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:11:21         final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
01:11:21                                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:11:21         final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
01:11:21                                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:11:21         RoiResult r = svc.findByImage(image.getId().getValue(),
01:11:21                          ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:21         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:11:21                                 ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:21         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:11:21                ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:21         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:11:21                ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:21         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:11:21                                 ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
01:11:21         Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
01:11:21                                          ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:21         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:11:21                                 ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
01:11:21         table = svc.getTable(f.getId().getValue());
01:11:21                    ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:11:21         RoiResult r = svc.findByImage(image.getId().getValue(),
01:11:21                          ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:11:21         r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
01:11:21                ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:11:21         r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
01:11:21                ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:11:21         r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
01:11:21                ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:11:21         r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
01:11:21                ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:11:21                   ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:11:21                                   ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:11:21                                    ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:11:21                                                    ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Long(long) in Long has been deprecated
01:11:21             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:11:21                                       ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:11:21                                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:11:21                                                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:11:21                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:11:21                                                         ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:11:21                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:11:21                                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:11:21                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:11:21                                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:11:21                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:11:21                                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:11:21                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
01:11:21         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:11:21                                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:11:21                 svc.getShapeStatsRestricted(
01:11:21                    ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:11:21         final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
01:11:21                                        ^
01:11:21 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:11:21         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:11:21                                      ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:11:22         request.typesToIgnore = Collections.singletonList("TagAnnotation");
01:11:22                ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:11:22         request.typesToIgnore = Collections.singletonList("IAnnotationLink");
01:11:22                ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:11:22         request.typesToIgnore = Collections.singletonList("Annotation");
01:11:22                ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:11:22                     request.typesToIgnore = Collections.singletonList("Annotation");
01:11:22                            ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:11:22         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:11:22                                      ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:11:22         p2.setRelatedTo(p1);
01:11:22           ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:11:22         Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
01:11:22                                           ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:11:22         pixels1.setRelatedTo(pixels2);
01:11:22                ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:11:22         Pixels pixels = pixels1.getRelatedTo();
01:11:22                                ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:11:22         Assert.assertNull(pixels1.getRelatedTo());
01:11:22                                  ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:11:22         pixels1.setRelatedTo(pixels2);
01:11:22                ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:11:22         Pixels pixels = pixels1.getRelatedTo();
01:11:22                                ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:11:22         Assert.assertNull(pixels1.getRelatedTo());
01:11:22                                  ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:22         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:11:22                                 ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:22         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:11:22                ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:22         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:11:22                                 ^
01:11:22 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:11:22         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:11:22                ^
01:11:22 Note: Some input files use unchecked or unsafe operations.
01:11:22 Note: Recompile with -Xlint:unchecked for details.
01:11:22 88 warnings
01:11:22 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_47775550.tmp
01:11:22 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
01:11:22 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:11:22 :: delivering :: omero#OmeroJava-test;working@78531952a60e :: 5.6.3-531-d65edd4968-ice36 :: integration :: Sun Jan 26 01:11:08 UTC 2025
01:11:22 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
01:11:22 :: publishing :: omero#OmeroJava-test
01:11:22 	published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-531-d65edd4968-ice36.jar
01:11:22 	published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-531-d65edd4968-ice36.xml
01:11:22 
01:11:22 build-eclipse:
01:11:22 No sub-builds to iterate on
01:11:22 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:11:23 
01:11:23 retrieve:
01:11:23 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:11:23 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:11:25 
01:11:25 prepare:
01:11:25 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
01:11:27 
01:11:27 release-clients:
01:11:27 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-531-d65edd4968-ice36.zip
01:11:33 
01:11:33 release-zip:
01:11:33 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-531-d65edd4968-ice36.zip
01:11:45 
01:11:45 BUILD SUCCESSFUL
01:11:45 Total time: 1 minute 19 seconds
01:11:45 ++ '[' -d .git ']'
01:11:45 ++ python3 ./build.py release-src
01:11:45 OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
01:11:45 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
01:11:46 
01:11:46 release-src-git:
01:11:46 Releasing openmicroscopy-5.6.3-531-d65edd4968-ice36
01:11:49   - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-531-d65edd4968-ice36.zip
01:11:49   - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-531-d65edd4968-ice36-base.zip
01:11:50 
01:11:50 BUILD SUCCESSFUL
01:11:50 Total time: 4 seconds
01:11:50 ++ echo BUILD_NUMBER=301
01:11:50 ++ echo OMERO_BRANCH=merge_ci
01:11:50 ++ git_info
01:11:50 +++ git rev-parse HEAD
01:11:50 ++ HEAD=d65edd4968e73438f406ccf5a279f7cf59dc5266
01:11:50 ++ git log --max-count=1 d65edd4968e73438f406ccf5a279f7cf59dc5266
01:11:50 ++ env
01:11:50 ++ sort
01:11:50 Archiving artifacts
01:12:19 Finished: SUCCESS