11:09:16Started by user devspace11:09:16Running as SYSTEM
11:09:16Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
11:09:16The recommended git tool is: NONE
11:09:16No credentials specified
11:09:16 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
11:09:16Fetching changes from the remote Git repository
11:09:16 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
11:09:16Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git11:09:16 > git --version # timeout=10
11:09:16 > git --version # 'git version 2.43.5'
11:09:16 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
11:09:19 > git rev-parse origin/merge_ci^{commit} # timeout=10
11:09:19Checking out Revision 1677ee6b231ee293d673ed7380c9d11e6799c834 (origin/merge_ci)
11:09:19 > git config core.sparsecheckout # timeout=10
11:09:19 > git checkout -f 1677ee6b231ee293d673ed7380c9d11e6799c834 # timeout=10
11:09:19Commit message: "Add version.properties to etc/omero.properties"
11:09:19 > git rev-list --no-walk 1677ee6b231ee293d673ed7380c9d11e6799c834 # timeout=10
11:09:19Cleaning workspace
11:09:19 > git rev-parse --verify HEAD # timeout=10
11:09:19Resetting working tree
11:09:19 > git reset --hard # timeout=10
11:09:20 > git clean -fdx # timeout=10
11:09:20Copied 6 artifacts from "OMERO-python-superbuild-build" build number 34111:09:20[OMERO-build] $ /bin/bash -xe /tmp/jenkins17232273795172286700.sh
11:09:20+ mv omero-scripts/dist/omero_scripts-5.9.1.dev0.tar.gz .
11:09:20+ cd src
11:09:20+ export OMERO_BRANCH=merge_ci
11:09:20+ OMERO_BRANCH=merge_ci
11:09:20+ OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
11:09:20+ source /home/omero/settings.env
11:09:20++ OMERO_DB_HOST=pg
11:09:20++ OMERO_DB_USER=postgres
11:09:20++ OMERO_DB_PASS=
11:09:20++ OMERO_ROOT_PASS=omero
11:09:20++ OMERO_DATA_DIR=/OMERO
11:09:20++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
11:09:20+ python3 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
11:09:24+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl11:09:26Collecting zeroc-ice==3.6.5
11:09:27 Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
11:09:28WARNING: You are using pip version 21.2.3; however, version 25.0.1 is available.
11:09:28You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
11:09:29+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U setuptools omero-py
11:09:29Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (77.0.1)
11:09:29Requirement already satisfied: omero-py in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (5.19.6)
11:09:30Requirement already satisfied: requests in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.31.0)
11:09:30Requirement already satisfied: future in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.0.0)
11:09:30Requirement already satisfied: urllib3<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.18)
11:09:30Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (3.6.5)
11:09:30Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (2.8.2)
11:09:30Requirement already satisfied: numpy<2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.26.4)
11:09:30Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (6.0.1)
11:09:30Requirement already satisfied: Pillow>=10.0.0 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (10.2.0)
11:09:30Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from omero-py) (1.4.4)
11:09:30Requirement already satisfied: charset-normalizer<4,>=2 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.3.2)
11:09:30Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (3.6)
11:09:30Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib/python3.9/site-packages (from requests->omero-py) (2024.2.2)
11:09:30WARNING: You are using pip version 21.2.3; however, version 25.0.1 is available.
11:09:30You should consider upgrading via the '/home/omero/workspace/OMERO-build/omero-virtualenv/bin/python3 -m pip install --upgrade pip' command.
11:09:30+ source docs/hudson/OMERO.sh
11:09:30++ set -e
11:09:30++ set -u
11:09:30++ set -x
11:09:30++ source docs/hudson/functions.sh
11:09:30++ echo Building merge_ci
11:09:30Building merge_ci
11:09:30++ python3 ./build.py build-dev release-all
11:09:30OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
11:09:31Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
11:09:3511:09:35check-ivy:
11:09:35Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
11:09:35Created dir: /home/omero/workspace/OMERO-build/src/target
11:09:37:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:09:37:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:09:3711:09:37build-scons:
11:09:37Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
11:09:38No sub-builds to iterate on
11:09:38Entering /home/omero/workspace/OMERO-build/src/components/tools...
11:09:3911:09:39buildlist:
11:09:39:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:09:39:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:09:3911:09:39clean:
11:09:39Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:09:39Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:09:3911:09:39python-clean:
11:09:39WARNING: '' not a valid package name; please use only .-separated package names in setup.py
11:09:39/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-548-1677ee6b23-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
11:09:39 warnings.warn(
11:09:39running clean
11:09:39Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
11:09:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
11:09:4011:09:40python-clean:
11:09:40WARNING: '' not a valid package name; please use only .-separated package names in setup.py
11:09:40/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-548-1677ee6b23-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
11:09:40 warnings.warn(
11:09:40running clean
11:09:40Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
11:09:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
11:09:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:09:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:09:4011:09:40python-clean:
11:09:40WARNING: '' not a valid package name; please use only .-separated package names in setup.py
11:09:40/usr/lib/python3.9/site-packages/setuptools/dist.py:480: UserWarning: The version specified ('5.6.3-548-1677ee6b23-ice36') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
11:09:40 warnings.warn(
11:09:40running clean
11:09:40Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
11:09:40Deleting directory /home/omero/workspace/OMERO-build/src/target
11:09:4011:09:40build-scons:
11:09:40Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
11:09:4011:09:40build:
11:09:40No sub-builds to iterate on
11:09:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:09:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:09:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
11:09:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
11:09:4011:09:40tools-init:
11:09:40no-op
11:09:4111:09:41retrieve:
11:09:41:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:09:41:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:09:41WARNING: An illegal reflective access operation has occurred
11:09:41WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-build/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator
11:09:41WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator
11:09:41WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
11:09:41WARNING: All illegal access operations will be denied in a future release
11:10:1911:10:19prepare:
11:10:19Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
11:10:19Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
11:10:19Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
11:10:19Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:10:19Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:10:19Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
11:10:19Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
11:10:19Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:10:19Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:10:19Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:10:19Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:10:19Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:10:19Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:10:19Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:10:19Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:10:1911:10:19pre-compile:
11:10:19Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:10:19Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:10:19Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:10:19Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:10:19Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:10:1911:10:19compile:
11:10:19no-op
11:10:1911:10:19package:
11:10:19Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
11:10:2011:10:20install:
11:10:20:: delivering :: omero#omero_client;working@c9d3d64c1315 :: 5.6.3-548-1677ee6b23-ice36 :: integration :: Thu Mar 20 11:09:40 UTC 2025
11:10:20 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
11:10:20:: publishing :: omero#omero_client
11:10:20 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-548-1677ee6b23-ice36/omero_client-5.6.3-548-1677ee6b23-ice36.jar
11:10:20 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-548-1677ee6b23-ice36/omero_client-5.6.3-548-1677ee6b23-ice36.xml
11:10:20Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:10:20Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:10:2011:10:20retrieve:
11:10:20:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:10:20:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:10:20Entering /home/omero/workspace/OMERO-build/src/components/tools...
11:10:2011:10:20dist:
11:10:20Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
11:10:20Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
11:10:20Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
11:10:20Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.9.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
11:10:20Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
11:10:20Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
11:10:20Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
11:10:21Entering /home/omero/workspace/OMERO-build/src/components/tests...
11:10:21Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
11:10:2111:10:21copy-licenses:
11:10:21Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
11:10:21Created dir: /home/omero/workspace/OMERO-build/src/dist/share
11:10:21Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
11:10:2111:10:21copy-history:
11:10:21Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
11:10:2111:10:21copy-etc:
11:10:21Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
11:10:22Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
11:10:2211:10:22copy-sql:
11:10:22Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
11:10:3011:10:30copy-server:
11:10:30 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.0.11 won
11:10:3011:10:30copy-client:
11:10:30Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
11:10:31 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.0.11 won
11:10:3111:10:31update-version:
11:10:31Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
11:10:3111:10:31create-workdirs:
11:10:31Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
11:10:31Created dir: /home/omero/workspace/OMERO-build/src/dist/var
11:10:3111:10:31copy-luts:
11:10:31Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
11:10:31Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
11:10:3311:10:33test-compile:
11:10:33:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:10:33Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
11:10:33Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:10:33Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:10:33Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:10:33Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:10:33Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
11:10:33Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
11:10:3311:10:33testng-init:
11:10:33:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:10:33:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:10:3711:10:37,137 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.15
11:10:3711:10:37,140 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4c1ce13a - No custom configurators were discovered as a service.
11:10:3711:10:37,140 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4c1ce13a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
11:10:3711:10:37,143 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4c1ce13a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
11:10:3711:10:37,144 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
11:10:3711:10:37,144 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
11:10:3711:10:37,145 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4c1ce13a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
11:10:3711:10:37,145 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4c1ce13a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
11:10:3711:10:37,147 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4c1ce13a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
11:10:3711:10:37,147 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
11:10:3711:10:37,147 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
11:10:3711:10:37,148 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@179eb386 - Resource [logback.xml] occurs multiple times on the classpath.
11:10:3711:10:37,148 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@179eb386 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
11:10:3711:10:37,148 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@179eb386 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
11:10:3711:10:37,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
11:10:3711:10:37,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
11:10:3711:10:37,365 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
11:10:3711:10:37,367 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2896e105 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
11:10:3711:10:37,367 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2896e105 - Please move "immediateFlush" property into the enclosing appender.
11:10:3711:10:37,428 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2896e105 - Setting the "immediateFlush" property of the enclosing appender to true
11:10:3711:10:37,429 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
11:10:3711:10:37,429 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
11:10:3711:10:37,429 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
11:10:3711:10:37,429 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
11:10:3711:10:37,429 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
11:10:3711:10:37,429 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
11:10:3711:10:37,430 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7c76d466 - End of configuration.
11:10:3711:10:37,432 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5748ffe3 - Registering current configuration as safe fallback point
11:10:3711:10:37,432 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4c1ce13a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 286 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
11:10:3711:10:37lifecycle.test-compile:
11:10:37Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
11:10:37Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
11:10:37warning: [options] bootstrap class path not set in conjunction with -source 8
11:10:41/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:10:41import omero.grid.RawAccessRequest;
11:10:41 ^
11:10:41/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:10:41import omero.grid.RawAccessRequest;
11:10:41 ^
11:10:41/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:10:41import omero.grid.RawAccessRequest;
11:10:41 ^
11:10:41/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
11:10:41import omero.model.ImportJob;
11:10:41 ^
11:10:41/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
11:10:41import omero.model.ImportJobI;
11:10:41 ^
11:10:42/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
11:10:42 IObject link = (IObject) linkClass.newInstance();
11:10:42 ^
11:10:42 where T is a type-variable:
11:10:42 T extends Object declared in class Class
11:10:42/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
11:10:42 T copy = (T) obj.getClass().newInstance();
11:10:42 ^
11:10:42 where T is a type-variable:
11:10:42 T extends Object declared in class Class
11:10:42/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:10:42 RawAccessRequest raw = new RawAccessRequest();
11:10:42 ^
11:10:42/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:10:42 RawAccessRequest raw = new RawAccessRequest();
11:10:42 ^
11:10:42/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
11:10:42 raw.repoUuid = legacy.root().getHash().getValue();
11:10:42 ^
11:10:42/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
11:10:42 raw.command = "rm";
11:10:42 ^
11:10:42/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
11:10:42 raw.args = Arrays.asList(path);
11:10:42 ^
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
11:10:43 final IObject link = linkClass.newInstance();
11:10:43 ^
11:10:43 where T is a type-variable:
11:10:43 T extends Object declared in class Class
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
11:10:43 originalLink.setChild(annotationClass.newInstance());
11:10:43 ^
11:10:43 where T is a type-variable:
11:10:43 T extends Object declared in class Class
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
11:10:43 RoiResult r = svc.findByImage(id, new RoiOptions());
11:10:43 ^
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:10:43 final RawAccessRequest request = new RawAccessRequest();
11:10:43 ^
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:10:43 final RawAccessRequest request = new RawAccessRequest();
11:10:43 ^
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
11:10:43 request.repoUuid = repo.root().getHash().getValue();
11:10:43 ^
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
11:10:43 request.command = "exists";
11:10:43 ^
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
11:10:43 request.args = Collections.singletonList(dirPath);
11:10:43 ^
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:10:43 final RawAccessRequest request = new RawAccessRequest();
11:10:43 ^
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:10:43 final RawAccessRequest request = new RawAccessRequest();
11:10:43 ^
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
11:10:43 request.repoUuid = repo.root().getHash().getValue();
11:10:43 ^
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
11:10:43 request.command = "exists";
11:10:43 ^
11:10:43/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
11:10:43 request.args = Collections.singletonList(dirName);
11:10:43 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
11:10:44 final ImportJob importJob = new ImportJobI();
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
11:10:44 final ImportJob importJob = new ImportJobI();
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
11:10:44 importJob.setImageName(omero.rtypes.rstring(name));
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
11:10:44 importJob.setImageDescription(omero.rtypes.rstring(desc));
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
11:10:44 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
11:10:44 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
11:10:44 final String savedName = sent.getImageName().getValue().toString();
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
11:10:44 final String savedDesc = sent.getImageDescription().getValue().toString();
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
11:10:44 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
11:10:44 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
11:10:44 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
11:10:44 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 RoiResult r = svc.findByImage(image.getId().getValue(),
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
11:10:44 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
11:10:44 table = svc.getTable(f.getId().getValue());
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 RoiResult r = svc.findByImage(image.getId().getValue(),
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
11:10:44 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
11:10:44 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Long(long) in Long has been deprecated
11:10:44 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
11:10:44 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
11:10:44 svc.getShapeStatsRestricted(
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
11:10:44 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:10:44 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:10:44 request.typesToIgnore = Collections.singletonList("TagAnnotation");
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:10:44 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:10:44 request.typesToIgnore = Collections.singletonList("Annotation");
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:10:44 request.typesToIgnore = Collections.singletonList("Annotation");
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:10:44 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:10:44 p2.setRelatedTo(p1);
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:10:44 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:10:44 pixels1.setRelatedTo(pixels2);
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:10:44 Pixels pixels = pixels1.getRelatedTo();
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:10:44 Assert.assertNull(pixels1.getRelatedTo());
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:10:44 pixels1.setRelatedTo(pixels2);
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:10:44 Pixels pixels = pixels1.getRelatedTo();
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:10:44 Assert.assertNull(pixels1.getRelatedTo());
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:10:44 ^
11:10:44/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:10:44 l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:10:44 ^
11:10:45Note: Some input files use unchecked or unsafe operations.
11:10:45Note: Recompile with -Xlint:unchecked for details.
11:10:4588 warnings
11:10:45Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_320432899.tmp
11:10:45Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
11:10:45:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:10:45:: delivering :: omero#OmeroJava-test;working@c9d3d64c1315 :: 5.6.3-548-1677ee6b23-ice36 :: integration :: Thu Mar 20 11:10:33 UTC 2025
11:10:45 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
11:10:45:: publishing :: omero#OmeroJava-test
11:10:45 published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-548-1677ee6b23-ice36.jar
11:10:45 published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-548-1677ee6b23-ice36.xml
11:10:4511:10:45build-eclipse:
11:10:45No sub-builds to iterate on
11:10:45Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
11:10:4511:10:45retrieve:
11:10:45:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:10:45:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:10:4711:10:47prepare:
11:10:47Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
11:10:4911:10:49release-clients:
11:10:49Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-548-1677ee6b23-ice36.zip
11:10:5411:10:54release-zip:
11:10:54Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-548-1677ee6b23-ice36.zip
11:11:0611:11:06BUILD SUCCESSFUL
11:11:06Total time: 1 minute 35 seconds
11:11:06++ '[' -d .git ']'
11:11:06++ python3 ./build.py release-src
11:11:06OpenJDK 64-Bit Server VM warning: Ignoring option MaxPermSize; support was removed in 8.0
11:11:06Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
11:11:0711:11:07release-src-git:
11:11:07Releasing openmicroscopy-5.6.3-548-1677ee6b23-ice36
11:11:10 - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-548-1677ee6b23-ice36.zip
11:11:10 - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-548-1677ee6b23-ice36-base.zip
11:11:1111:11:11BUILD SUCCESSFUL
11:11:11Total time: 5 seconds
11:11:11++ echo BUILD_NUMBER=345
11:11:11++ echo OMERO_BRANCH=merge_ci
11:11:11++ git_info
11:11:11+++ git rev-parse HEAD
11:11:11++ HEAD=1677ee6b231ee293d673ed7380c9d11e6799c834
11:11:11++ git log --max-count=1 1677ee6b231ee293d673ed7380c9d11e6799c834
11:11:11++ env
11:11:11++ sort
11:11:11Archiving artifacts
11:11:39Finished: SUCCESS
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