12:47:59 Started by user devspace
12:47:59 Running as SYSTEM
12:47:59 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
12:47:59 The recommended git tool is: NONE
12:47:59 No credentials specified
12:47:59 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
12:47:59 Fetching changes from the remote Git repository
12:47:59 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
12:47:59 Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git
12:47:59 > git --version # timeout=10
12:47:59 > git --version # 'git version 2.52.0'
12:47:59 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
12:48:01 > git rev-parse origin/merge_ci^{commit} # timeout=10
12:48:01 Checking out Revision ea14a7366ee8807abc1e35a9cacc1aeac2df51e0 (origin/merge_ci)
12:48:01 > git config core.sparsecheckout # timeout=10
12:48:01 > git checkout -f ea14a7366ee8807abc1e35a9cacc1aeac2df51e0 # timeout=10
12:48:01 Commit message: "Add version.properties to etc/omero.properties"
12:48:01 > git rev-list --no-walk ea14a7366ee8807abc1e35a9cacc1aeac2df51e0 # timeout=10
12:48:01 Cleaning workspace
12:48:01 > git rev-parse --verify HEAD # timeout=10
12:48:01 Resetting working tree
12:48:01 > git reset --hard # timeout=10
12:48:02 > git clean -fdx # timeout=10
12:48:17 Copied 6 artifacts from "OMERO-python-superbuild-build" build number 48
12:48:17 [OMERO-build] $ /bin/bash -xe /tmp/jenkins2277797218223735918.sh
12:48:17 + mv omero-scripts/dist/omero_scripts-5.10.1.dev0.tar.gz .
12:48:17 + cd src
12:48:17 + export OMERO_BRANCH=merge_ci
12:48:17 + OMERO_BRANCH=merge_ci
12:48:17 + OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
12:48:17 + rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
12:48:32 + source /home/omero/settings.env
12:48:32 ++ OMERO_DB_HOST=pg
12:48:32 ++ OMERO_DB_USER=postgres
12:48:32 ++ OMERO_DB_PASS=
12:48:32 ++ OMERO_ROOT_PASS=omero
12:48:32 ++ OMERO_DATA_DIR=/OMERO
12:48:32 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
12:48:32 + python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
12:48:52 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
12:48:54 Collecting zeroc-ice==3.6.5
12:48:54 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
12:48:56 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 12.8 MB/s eta 0:00:00
12:48:57 Installing collected packages: zeroc-ice
12:49:00 Successfully installed zeroc-ice-3.6.5
12:49:00
12:49:00 [notice] A new release of pip available: 22.3.1 -> 26.2.1
12:49:00 [notice] To update, run: python3.11 -m pip install --upgrade pip
12:49:00 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
12:49:01 Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
12:49:01 Collecting setuptools<66
12:49:01 Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
12:49:02 Collecting omero-py
12:49:02 Using cached omero_py-5.23.0-py3-none-any.whl (2.8 MB)
12:49:02 Collecting appdirs
12:49:02 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
12:49:02 Collecting future
12:49:02 Using cached future-1.0.0-py3-none-any.whl (491 kB)
12:49:02 Collecting numpy<3,>=2
12:49:02 Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
12:49:03 Collecting Pillow>=10.0.0
12:49:03 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
12:49:03 Collecting PyYAML
12:49:03 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
12:49:03 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
12:49:03 Collecting requests
12:49:03 Using cached requests-2.34.2-py3-none-any.whl (73 kB)
12:49:03 Collecting portalocker
12:49:03 Using cached portalocker-4.1.0-py3-none-any.whl (65 kB)
12:49:04 Collecting charset_normalizer<4,>=2
12:49:04 Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (262 kB)
12:49:04 Collecting idna<4,>=2.5
12:49:04 Using cached idna-3.19-py3-none-any.whl (68 kB)
12:49:04 Collecting urllib3<3,>=1.26
12:49:04 Using cached urllib3-2.7.0-py3-none-any.whl (131 kB)
12:49:04 Collecting certifi>=2023.5.7
12:49:04 Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
12:49:04 Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
12:49:05 Attempting uninstall: setuptools
12:49:05 Found existing installation: setuptools 65.5.1
12:49:06 Uninstalling setuptools-65.5.1:
12:49:07 Successfully uninstalled setuptools-65.5.1
12:49:57 Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2026.7.22 charset_normalizer-3.5.1 future-1.0.0 idna-3.19 numpy-2.4.6 omero-py-5.23.0 portalocker-4.1.0 requests-2.34.2 setuptools-65.7.0 urllib3-2.7.0
12:49:57
12:49:57 [notice] A new release of pip available: 22.3.1 -> 26.2.1
12:49:57 [notice] To update, run: python3.11 -m pip install --upgrade pip
12:49:58 + source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
12:49:58 ++ deactivate nondestructive
12:49:58 ++ '[' -n '' ']'
12:49:58 ++ '[' -n '' ']'
12:49:58 ++ hash -r
12:49:58 ++ '[' -n '' ']'
12:49:58 ++ unset VIRTUAL_ENV
12:49:58 ++ unset VIRTUAL_ENV_PROMPT
12:49:58 ++ '[' '!' nondestructive = nondestructive ']'
12:49:58 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
12:49:58 ++ export VIRTUAL_ENV
12:49:58 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
12:49:58 ++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
12:49:58 ++ export PATH
12:49:58 ++ '[' -n '' ']'
12:49:58 ++ '[' -z '' ']'
12:49:58 ++ _OLD_VIRTUAL_PS1=
12:49:58 ++ PS1='(omero-virtualenv) '
12:49:58 ++ export PS1
12:49:58 ++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
12:49:58 ++ export VIRTUAL_ENV_PROMPT
12:49:58 ++ hash -r
12:49:58 + source docs/hudson/OMERO.sh
12:49:58 ++ set -e
12:49:58 ++ set -u
12:49:58 ++ set -x
12:49:58 ++ source docs/hudson/functions.sh
12:49:58 ++ echo Building merge_ci
12:49:58 Building merge_ci
12:49:58 ++ python3 ./build.py build-dev release-all
12:49:58 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
12:50:00
12:50:00 check-ivy:
12:50:00 Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
12:50:00 Created dir: /home/omero/workspace/OMERO-build/src/target
12:50:00 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
12:50:00 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
12:50:01
12:50:01 build-scons:
12:50:01 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
12:50:03 No sub-builds to iterate on
12:50:04 Entering /home/omero/workspace/OMERO-build/src/components/tools...
12:50:04
12:50:04 buildlist:
12:50:04 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
12:50:04 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
12:50:04
12:50:04 clean:
12:50:04 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
12:50:05 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
12:50:05
12:50:05 python-clean:
12:50:05 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
12:50:05 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-675-ea14a7366e-ice36-b56') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
12:50:05 warnings.warn(
12:50:05 running clean
12:50:06 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
12:50:06 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
12:50:07
12:50:07 python-clean:
12:50:07 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
12:50:07 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-675-ea14a7366e-ice36-b56') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
12:50:07 warnings.warn(
12:50:07 running clean
12:50:07 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
12:50:07 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
12:50:08 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
12:50:08 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
12:50:08
12:50:08 python-clean:
12:50:08 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
12:50:08 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-675-ea14a7366e-ice36-b56') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
12:50:08 warnings.warn(
12:50:08 running clean
12:50:08 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
12:50:08 Deleting directory /home/omero/workspace/OMERO-build/src/target
12:50:09
12:50:09 build-scons:
12:50:09 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
12:50:11
12:50:11 build:
12:50:11 No sub-builds to iterate on
12:50:11 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
12:50:12 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
12:50:12 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
12:50:13 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
12:50:13
12:50:13 tools-init:
12:50:13 no-op
12:50:13
12:50:13 retrieve:
12:50:13 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
12:50:13 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
12:50:59
12:50:59 prepare:
12:50:59 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
12:50:59 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
12:50:59 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
12:50:59 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
12:50:59 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
12:50:59 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
12:50:59 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
12:50:59 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
12:50:59 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
12:50:59 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
12:50:59 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
12:50:59 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
12:50:59 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
12:50:59 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
12:50:59 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
12:50:59
12:50:59 pre-compile:
12:50:59 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
12:51:01 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
12:51:08 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
12:51:12 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
12:51:13 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
12:51:15
12:51:15 compile:
12:51:15 no-op
12:51:16
12:51:16 package:
12:51:16 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
12:51:19
12:51:19 install:
12:51:19 :: delivering :: omero#omero_client;working@8bdefdc8cc5f :: 5.6.3-675-ea14a7366e-ice36-b56 :: integration :: Fri Aug 21 12:50:12 UTC 2026
12:51:19 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
12:51:19 :: publishing :: omero#omero_client
12:51:19 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-675-ea14a7366e-ice36-b56/omero_client-5.6.3-675-ea14a7366e-ice36-b56.jar
12:51:19 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-675-ea14a7366e-ice36-b56/omero_client-5.6.3-675-ea14a7366e-ice36-b56.xml
12:51:20 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
12:51:20 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
12:51:20
12:51:20 retrieve:
12:51:20 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
12:51:20 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
12:51:21 Entering /home/omero/workspace/OMERO-build/src/components/tools...
12:51:21
12:51:21 dist:
12:51:21 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
12:51:21 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
12:51:21 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
12:51:21 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.10.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
12:51:21 Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
12:51:22 Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
12:51:22 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
12:51:22 Entering /home/omero/workspace/OMERO-build/src/components/tests...
12:51:23 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
12:51:23
12:51:23 copy-licenses:
12:51:23 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
12:51:23 Created dir: /home/omero/workspace/OMERO-build/src/dist/share
12:51:23 Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
12:51:24
12:51:24 copy-history:
12:51:24 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
12:51:24
12:51:24 copy-etc:
12:51:24 Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
12:51:24 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
12:51:24
12:51:24 copy-sql:
12:51:24 Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
12:51:47
12:51:47 copy-server:
12:51:47 :: problems summary ::
12:51:47 :::: WARNINGS
12:51:47 [NOT FOUND ] com.google.guava#failureaccess;1.0.3!failureaccess.jar (0ms)
12:51:47 ==== user-maven: tried
12:51:47 /home/omero/.m2/repository/com/google/guava/failureaccess/1.0.3/failureaccess-1.0.3.jar
12:51:47 [NOT FOUND ] org.jspecify#jspecify;1.0.0!jspecify.jar (1ms)
12:51:47 ==== user-maven: tried
12:51:47 /home/omero/.m2/repository/org/jspecify/jspecify/1.0.0/jspecify-1.0.0.jar
12:51:47 ::::::::::::::::::::::::::::::::::::::::::::::
12:51:47 :: FAILED DOWNLOADS ::
12:51:47 :: ^ see resolution messages for details ^ ::
12:51:47 ::::::::::::::::::::::::::::::::::::::::::::::
12:51:47 :: com.google.guava#failureaccess;1.0.3!failureaccess.jar
12:51:47 :: org.jspecify#jspecify;1.0.0!jspecify.jar
12:51:47 ::::::::::::::::::::::::::::::::::::::::::::::
12:51:47
12:51:47
12:51:47 :: USE VERBOSE OR DEBUG MESSAGE LEVEL FOR MORE DETAILS
12:51:47
12:51:47 BUILD FAILED
12:51:47 /home/omero/workspace/OMERO-build/src/build.xml:106: The following error occurred while executing this line:
12:51:47 /home/omero/workspace/OMERO-build/src/build.xml:361: impossible to resolve dependencies:
12:51:47 resolve failed - see output for details
12:51:47
12:51:47 Total time: 1 minute 49 seconds
12:51:47 Build step 'Execute shell' marked build as failure
12:51:47 Archiving artifacts
12:51:47 Finished: FAILURE
