13:12:30 Started by user devspace
13:12:30 Running as SYSTEM
13:12:30 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
13:12:30 The recommended git tool is: NONE
13:12:30 No credentials specified
13:12:30 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
13:12:30 Fetching changes from the remote Git repository
13:12:30 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
13:12:30 Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git
13:12:30 > git --version # timeout=10
13:12:30 > git --version # 'git version 2.52.0'
13:12:30 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
13:12:32 > git rev-parse origin/merge_ci^{commit} # timeout=10
13:12:32 Checking out Revision ea14a7366ee8807abc1e35a9cacc1aeac2df51e0 (origin/merge_ci)
13:12:32 > git config core.sparsecheckout # timeout=10
13:12:32 > git checkout -f ea14a7366ee8807abc1e35a9cacc1aeac2df51e0 # timeout=10
13:12:32 Commit message: "Add version.properties to etc/omero.properties"
13:12:32 > git rev-list --no-walk ea14a7366ee8807abc1e35a9cacc1aeac2df51e0 # timeout=10
13:12:32 Cleaning workspace
13:12:32 > git rev-parse --verify HEAD # timeout=10
13:12:32 Resetting working tree
13:12:32 > git reset --hard # timeout=10
13:12:32 > git clean -fdx # timeout=10
13:12:49 Copied 6 artifacts from "OMERO-python-superbuild-build" build number 48
13:12:50 [OMERO-build] $ /bin/bash -xe /tmp/jenkins621412207243570504.sh
13:12:50 + mv omero-scripts/dist/omero_scripts-5.10.1.dev0.tar.gz .
13:12:50 + cd src
13:12:50 + export OMERO_BRANCH=merge_ci
13:12:50 + OMERO_BRANCH=merge_ci
13:12:50 + OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
13:12:50 + rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
13:13:06 + source /home/omero/settings.env
13:13:06 ++ OMERO_DB_HOST=pg
13:13:06 ++ OMERO_DB_USER=postgres
13:13:06 ++ OMERO_DB_PASS=
13:13:06 ++ OMERO_ROOT_PASS=omero
13:13:06 ++ OMERO_DATA_DIR=/OMERO
13:13:06 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
13:13:06 + python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
13:13:24 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
13:13:26 Collecting zeroc-ice==3.6.5
13:13:26 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
13:13:29 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 11.1 MB/s eta 0:00:00
13:13:29 Installing collected packages: zeroc-ice
13:13:32 Successfully installed zeroc-ice-3.6.5
13:13:32
13:13:32 [notice] A new release of pip available: 22.3.1 -> 26.2.1
13:13:32 [notice] To update, run: python3.11 -m pip install --upgrade pip
13:13:33 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
13:13:33 Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
13:13:34 Collecting setuptools<66
13:13:34 Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
13:13:34 Collecting omero-py
13:13:34 Using cached omero_py-5.23.0-py3-none-any.whl (2.8 MB)
13:13:34 Collecting appdirs
13:13:34 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
13:13:34 Collecting future
13:13:34 Using cached future-1.0.0-py3-none-any.whl (491 kB)
13:13:35 Collecting numpy<3,>=2
13:13:35 Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
13:13:36 Collecting Pillow>=10.0.0
13:13:36 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
13:13:36 Collecting PyYAML
13:13:36 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
13:13:36 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
13:13:36 Collecting requests
13:13:36 Using cached requests-2.34.2-py3-none-any.whl (73 kB)
13:13:36 Collecting portalocker
13:13:36 Using cached portalocker-4.1.0-py3-none-any.whl (65 kB)
13:13:36 Collecting charset_normalizer<4,>=2
13:13:36 Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (262 kB)
13:13:36 Collecting idna<4,>=2.5
13:13:36 Using cached idna-3.19-py3-none-any.whl (68 kB)
13:13:37 Collecting urllib3<3,>=1.26
13:13:37 Using cached urllib3-2.7.0-py3-none-any.whl (131 kB)
13:13:37 Collecting certifi>=2023.5.7
13:13:37 Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
13:13:37 Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
13:13:38 Attempting uninstall: setuptools
13:13:38 Found existing installation: setuptools 65.5.1
13:13:38 Uninstalling setuptools-65.5.1:
13:13:39 Successfully uninstalled setuptools-65.5.1
13:14:30 Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2026.7.22 charset_normalizer-3.5.1 future-1.0.0 idna-3.19 numpy-2.4.6 omero-py-5.23.0 portalocker-4.1.0 requests-2.34.2 setuptools-65.7.0 urllib3-2.7.0
13:14:30
13:14:30 [notice] A new release of pip available: 22.3.1 -> 26.2.1
13:14:30 [notice] To update, run: python3.11 -m pip install --upgrade pip
13:14:30 + source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
13:14:30 ++ deactivate nondestructive
13:14:30 ++ '[' -n '' ']'
13:14:30 ++ '[' -n '' ']'
13:14:30 ++ hash -r
13:14:30 ++ '[' -n '' ']'
13:14:30 ++ unset VIRTUAL_ENV
13:14:30 ++ unset VIRTUAL_ENV_PROMPT
13:14:30 ++ '[' '!' nondestructive = nondestructive ']'
13:14:30 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
13:14:30 ++ export VIRTUAL_ENV
13:14:30 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
13:14:30 ++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
13:14:30 ++ export PATH
13:14:30 ++ '[' -n '' ']'
13:14:30 ++ '[' -z '' ']'
13:14:30 ++ _OLD_VIRTUAL_PS1=
13:14:30 ++ PS1='(omero-virtualenv) '
13:14:30 ++ export PS1
13:14:30 ++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
13:14:30 ++ export VIRTUAL_ENV_PROMPT
13:14:30 ++ hash -r
13:14:30 + source docs/hudson/OMERO.sh
13:14:30 ++ set -e
13:14:30 ++ set -u
13:14:30 ++ set -x
13:14:30 ++ source docs/hudson/functions.sh
13:14:30 ++ echo Building merge_ci
13:14:30 Building merge_ci
13:14:30 ++ python3 ./build.py build-dev release-all
13:14:30 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
13:14:31
13:14:31 check-ivy:
13:14:31 Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
13:14:31 Created dir: /home/omero/workspace/OMERO-build/src/target
13:14:32 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
13:14:32 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
13:14:33
13:14:33 build-scons:
13:14:33 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
13:14:35 No sub-builds to iterate on
13:14:35 Entering /home/omero/workspace/OMERO-build/src/components/tools...
13:14:36
13:14:36 buildlist:
13:14:36 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
13:14:36 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
13:14:36
13:14:36 clean:
13:14:36 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
13:14:36 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
13:14:37
13:14:37 python-clean:
13:14:38 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
13:14:38 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-675-ea14a7366e-ice36-b57') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
13:14:38 warnings.warn(
13:14:38 running clean
13:14:38 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
13:14:38 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
13:14:38
13:14:38 python-clean:
13:14:38 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
13:14:38 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-675-ea14a7366e-ice36-b57') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
13:14:38 warnings.warn(
13:14:38 running clean
13:14:38 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
13:14:38 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
13:14:39 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
13:14:39 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
13:14:40
13:14:40 python-clean:
13:14:40 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
13:14:40 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-675-ea14a7366e-ice36-b57') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
13:14:40 warnings.warn(
13:14:40 running clean
13:14:40 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
13:14:40 Deleting directory /home/omero/workspace/OMERO-build/src/target
13:14:41
13:14:41 build-scons:
13:14:41 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
13:14:42
13:14:42 build:
13:14:42 No sub-builds to iterate on
13:14:42 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
13:14:43 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
13:14:43 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
13:14:44 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
13:14:44
13:14:44 tools-init:
13:14:44 no-op
13:14:44
13:14:44 retrieve:
13:14:44 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
13:14:44 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
13:15:49
13:15:49 prepare:
13:15:49 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
13:15:49 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
13:15:49 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
13:15:49 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
13:15:49 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
13:15:49 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
13:15:49 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
13:15:49 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
13:15:49 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
13:15:49 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
13:15:49 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
13:15:49 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
13:15:49 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
13:15:49 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
13:15:49 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
13:15:49
13:15:49 pre-compile:
13:15:49 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
13:15:51 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
13:15:58 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
13:16:03 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
13:16:03 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
13:16:06
13:16:06 compile:
13:16:06 no-op
13:16:06
13:16:06 package:
13:16:06 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
13:16:11
13:16:11 install:
13:16:11 :: delivering :: omero#omero_client;working@8bdefdc8cc5f :: 5.6.3-675-ea14a7366e-ice36-b57 :: integration :: Fri Aug 21 13:14:43 UTC 2026
13:16:11 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
13:16:11 :: publishing :: omero#omero_client
13:16:11 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-675-ea14a7366e-ice36-b57/omero_client-5.6.3-675-ea14a7366e-ice36-b57.jar
13:16:11 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-675-ea14a7366e-ice36-b57/omero_client-5.6.3-675-ea14a7366e-ice36-b57.xml
13:16:12 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
13:16:12 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
13:16:12
13:16:12 retrieve:
13:16:12 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
13:16:12 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
13:16:13 Entering /home/omero/workspace/OMERO-build/src/components/tools...
13:16:13
13:16:13 dist:
13:16:13 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
13:16:13 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
13:16:13 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
13:16:13 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.10.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
13:16:14 Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
13:16:14 Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
13:16:14 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
13:16:15 Entering /home/omero/workspace/OMERO-build/src/components/tests...
13:16:15 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
13:16:16
13:16:16 copy-licenses:
13:16:16 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
13:16:16 Created dir: /home/omero/workspace/OMERO-build/src/dist/share
13:16:16 Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
13:16:17
13:16:17 copy-history:
13:16:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
13:16:17
13:16:17 copy-etc:
13:16:17 Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
13:16:17 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
13:16:17
13:16:17 copy-sql:
13:16:17 Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
13:16:41
13:16:41 copy-server:
13:16:41 :: problems summary ::
13:16:41 :::: WARNINGS
13:16:41 [NOT FOUND ] com.google.guava#failureaccess;1.0.3!failureaccess.jar (1ms)
13:16:41 ==== user-maven: tried
13:16:41 /home/omero/.m2/repository/com/google/guava/failureaccess/1.0.3/failureaccess-1.0.3.jar
13:16:41 [NOT FOUND ] org.jspecify#jspecify;1.0.0!jspecify.jar (1ms)
13:16:41 ==== user-maven: tried
13:16:41 /home/omero/.m2/repository/org/jspecify/jspecify/1.0.0/jspecify-1.0.0.jar
13:16:41 ::::::::::::::::::::::::::::::::::::::::::::::
13:16:41 :: FAILED DOWNLOADS ::
13:16:41 :: ^ see resolution messages for details ^ ::
13:16:41 ::::::::::::::::::::::::::::::::::::::::::::::
13:16:41 :: com.google.guava#failureaccess;1.0.3!failureaccess.jar
13:16:41 :: org.jspecify#jspecify;1.0.0!jspecify.jar
13:16:41 ::::::::::::::::::::::::::::::::::::::::::::::
13:16:41
13:16:41
13:16:41 :: USE VERBOSE OR DEBUG MESSAGE LEVEL FOR MORE DETAILS
13:16:41
13:16:41 BUILD FAILED
13:16:41 /home/omero/workspace/OMERO-build/src/build.xml:106: The following error occurred while executing this line:
13:16:41 /home/omero/workspace/OMERO-build/src/build.xml:361: impossible to resolve dependencies:
13:16:41 resolve failed - see output for details
13:16:41
13:16:41 Total time: 2 minutes 11 seconds
13:16:41 Build step 'Execute shell' marked build as failure
13:16:41 Archiving artifacts
13:16:41 Finished: FAILURE
