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23:30:30 Started by upstream project "Trigger" build number 111
23:30:30 originally caused by:
23:30:30  Started by timer
23:30:30 Running as SYSTEM
23:30:30 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
23:30:30 The recommended git tool is: NONE
23:30:30 No credentials specified
23:30:30  > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
23:30:30 Fetching changes from the remote Git repository
23:30:30  > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
23:30:30 Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git
23:30:30  > git --version # timeout=10
23:30:30  > git --version # 'git version 2.52.0'
23:30:30  > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
23:30:37  > git rev-parse origin/merge_ci^{commit} # timeout=10
23:30:37 Checking out Revision b09aa0614c9966dda50d2a27d29bc67cc4fe65a3 (origin/merge_ci)
23:30:37  > git config core.sparsecheckout # timeout=10
23:30:37  > git checkout -f b09aa0614c9966dda50d2a27d29bc67cc4fe65a3 # timeout=10
23:30:40 Commit message: "Add version.properties to etc/omero.properties"
23:30:40  > git rev-list --no-walk e7ae5d45722fe97cfccbda9a62931db7a2e2f706 # timeout=10
23:30:40 Cleaning workspace
23:30:40  > git rev-parse --verify HEAD # timeout=10
23:30:40 Resetting working tree
23:30:40  > git reset --hard # timeout=10
23:30:40  > git clean -fdx # timeout=10
23:31:29 Copied 6 artifacts from "OMERO-python-superbuild-build" build number 81
23:31:30 [OMERO-build] $ /bin/bash -xe /tmp/jenkins1198801503068981476.sh
23:31:30 + mv omero-scripts/dist/omero_scripts-5.10.1.dev0.tar.gz .
23:31:30 + cd src
23:31:30 + export OMERO_BRANCH=merge_ci
23:31:30 + OMERO_BRANCH=merge_ci
23:31:30 + OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
23:31:30 + rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
23:32:07 + source /home/omero/settings.env
23:32:07 ++ OMERO_DB_HOST=pg
23:32:07 ++ OMERO_DB_USER=postgres
23:32:07 ++ OMERO_DB_PASS=
23:32:07 ++ OMERO_ROOT_PASS=omero
23:32:07 ++ OMERO_DATA_DIR=/OMERO
23:32:07 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
23:32:07 + python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
23:32:27 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
23:32:28 Collecting zeroc-ice==3.6.5
23:32:28   Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
23:32:31      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 13.2 MB/s eta 0:00:00
23:32:31 Installing collected packages: zeroc-ice
23:32:34 Successfully installed zeroc-ice-3.6.5
23:32:34 
23:32:34 [notice] A new release of pip available: 22.3.1 -> 26.2.1
23:32:34 [notice] To update, run: python3.11 -m pip install --upgrade pip
23:32:34 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
23:32:35 Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
23:32:35 Collecting setuptools<66
23:32:36   Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
23:32:36 Collecting omero-py
23:32:36   Using cached omero_py-5.23.0-py3-none-any.whl (2.8 MB)
23:32:36 Collecting appdirs
23:32:36   Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
23:32:36 Collecting future
23:32:36   Using cached future-1.0.0-py3-none-any.whl (491 kB)
23:32:37 Collecting numpy<3,>=2
23:32:37   Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
23:32:38 Collecting Pillow>=10.0.0
23:32:38   Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
23:32:38 Collecting PyYAML
23:32:38   Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
23:32:38 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
23:32:38 Collecting requests
23:32:38   Using cached requests-2.34.2-py3-none-any.whl (73 kB)
23:32:38 Collecting portalocker
23:32:38   Using cached portalocker-4.4.0-py3-none-any.whl (129 kB)
23:32:39 Collecting charset_normalizer<4,>=2
23:32:39   Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (262 kB)
23:32:39 Collecting idna<4,>=2.5
23:32:39   Using cached idna-3.20-py3-none-any.whl (69 kB)
23:32:39 Collecting urllib3<3,>=1.26
23:32:39   Using cached urllib3-2.8.0-py3-none-any.whl (135 kB)
23:32:39 Collecting certifi>=2023.5.7
23:32:39   Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
23:32:40 Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
23:32:40   Attempting uninstall: setuptools
23:32:40     Found existing installation: setuptools 65.5.1
23:32:41     Uninstalling setuptools-65.5.1:
23:32:41       Successfully uninstalled setuptools-65.5.1
23:33:33 Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2026.7.22 charset_normalizer-3.5.1 future-1.0.0 idna-3.20 numpy-2.4.6 omero-py-5.23.0 portalocker-4.4.0 requests-2.34.2 setuptools-65.7.0 urllib3-2.8.0
23:33:33 
23:33:33 [notice] A new release of pip available: 22.3.1 -> 26.2.1
23:33:33 [notice] To update, run: python3.11 -m pip install --upgrade pip
23:33:34 + source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
23:33:34 ++ deactivate nondestructive
23:33:34 ++ '[' -n '' ']'
23:33:34 ++ '[' -n '' ']'
23:33:34 ++ hash -r
23:33:34 ++ '[' -n '' ']'
23:33:34 ++ unset VIRTUAL_ENV
23:33:34 ++ unset VIRTUAL_ENV_PROMPT
23:33:34 ++ '[' '!' nondestructive = nondestructive ']'
23:33:34 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
23:33:34 ++ export VIRTUAL_ENV
23:33:34 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
23:33:34 ++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
23:33:34 ++ export PATH
23:33:34 ++ '[' -n '' ']'
23:33:34 ++ '[' -z '' ']'
23:33:34 ++ _OLD_VIRTUAL_PS1=
23:33:34 ++ PS1='(omero-virtualenv) '
23:33:34 ++ export PS1
23:33:34 ++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
23:33:34 ++ export VIRTUAL_ENV_PROMPT
23:33:34 ++ hash -r
23:33:34 + source docs/hudson/OMERO.sh
23:33:34 ++ set -e
23:33:34 ++ set -u
23:33:34 ++ set -x
23:33:34 ++ source docs/hudson/functions.sh
23:33:34 ++ echo Building merge_ci
23:33:34 Building merge_ci
23:33:34 ++ python3 ./build.py build-dev release-all
23:33:34 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
23:33:36 
23:33:36 check-ivy:
23:33:36 Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
23:33:36 Created dir: /home/omero/workspace/OMERO-build/src/target
23:33:36 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:33:36 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:33:38 
23:33:38 build-scons:
23:33:38 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
23:33:40 No sub-builds to iterate on
23:33:41 Entering /home/omero/workspace/OMERO-build/src/components/tools...
23:33:41 
23:33:41 buildlist:
23:33:41 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:33:41 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:33:41 
23:33:41 clean:
23:33:41 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:33:42 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:33:42 
23:33:42 python-clean:
23:33:42 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
23:33:42 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-687-b09aa0614c-ice36-b90') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
23:33:42   warnings.warn(
23:33:42 running clean
23:33:42 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
23:33:43 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
23:33:44 
23:33:44 python-clean:
23:33:44 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
23:33:44 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-687-b09aa0614c-ice36-b90') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
23:33:44   warnings.warn(
23:33:44 running clean
23:33:44 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
23:33:44 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
23:33:45 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:33:45 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:33:45 
23:33:45 python-clean:
23:33:45 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
23:33:45 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-687-b09aa0614c-ice36-b90') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
23:33:45   warnings.warn(
23:33:45 running clean
23:33:45 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
23:33:45 Deleting directory /home/omero/workspace/OMERO-build/src/target
23:33:47 
23:33:47 build-scons:
23:33:47 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
23:33:49 
23:33:49 build:
23:33:49 No sub-builds to iterate on
23:33:49 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:33:49 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:33:50 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
23:33:50 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
23:33:50 
23:33:50 tools-init:
23:33:50 no-op
23:33:51 
23:33:51 retrieve:
23:33:51 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:33:51 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:36:12 
23:36:12 prepare:
23:36:12 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
23:36:12 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
23:36:12 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
23:36:12 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
23:36:12 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
23:36:12 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
23:36:12 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
23:36:12 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
23:36:12 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
23:36:12 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
23:36:12 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
23:36:12 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
23:36:12 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
23:36:12 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
23:36:12 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
23:36:12 
23:36:12 pre-compile:
23:36:12 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
23:36:14 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
23:36:21 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
23:36:25 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
23:36:26 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
23:36:28 
23:36:28 compile:
23:36:28 no-op
23:36:29 
23:36:29 package:
23:36:29 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
23:36:33 
23:36:33 install:
23:36:33 :: delivering :: omero#omero_client;working@5ffef7c1fdfa :: 5.6.3-687-b09aa0614c-ice36-b90 :: integration :: Sat Sep 26 23:33:50 UTC 2026
23:36:33 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
23:36:33 :: publishing :: omero#omero_client
23:36:33 	published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-687-b09aa0614c-ice36-b90/omero_client-5.6.3-687-b09aa0614c-ice36-b90.jar
23:36:33 	published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-687-b09aa0614c-ice36-b90/omero_client-5.6.3-687-b09aa0614c-ice36-b90.xml
23:36:34 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:36:34 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:36:35 
23:36:35 retrieve:
23:36:35 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:36:35 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:36:35 Entering /home/omero/workspace/OMERO-build/src/components/tools...
23:36:35 
23:36:35 dist:
23:36:35 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
23:36:35 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
23:36:35 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
23:36:35 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.10.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
23:36:36 Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
23:36:36 Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
23:36:37 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
23:36:37 Entering /home/omero/workspace/OMERO-build/src/components/tests...
23:36:38 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
23:36:39 
23:36:39 copy-licenses:
23:36:39 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
23:36:39 Created dir: /home/omero/workspace/OMERO-build/src/dist/share
23:36:39 Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
23:36:40 
23:36:40 copy-history:
23:36:40 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
23:36:40 
23:36:40 copy-etc:
23:36:40 Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
23:36:40 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
23:36:41 
23:36:41 copy-sql:
23:36:41 Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
23:37:08 
23:37:08 copy-server:
23:37:08 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
23:37:08 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/annotations.jar in [server]: 2.34.6 won
23:37:15 
23:37:15 copy-client:
23:37:15 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
23:37:22 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
23:37:22 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/annotations.jar in [client]: 2.34.6 won
23:37:28 
23:37:28 update-version:
23:37:28 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
23:37:28 
23:37:28 create-workdirs:
23:37:28 Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
23:37:28 Created dir: /home/omero/workspace/OMERO-build/src/dist/var
23:37:28 Created dir: /home/omero/workspace/OMERO-build/src/dist/var/tmp
23:37:28 
23:37:28 copy-luts:
23:37:28 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
23:37:28 Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
23:37:28 
23:37:28 test-compile:
23:37:28 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:37:29 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
23:37:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:37:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
23:37:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:37:30 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
23:37:31 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
23:37:31 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
23:37:32 
23:37:32 testng-init:
23:37:32 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:37:32 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:37:43 23:37:43,530 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
23:37:43 23:37:43,533 |-INFO in ch.qos.logback.classic.util.ContextInitializer@48adcadf - No custom configurators were discovered as a service.
23:37:43 23:37:43,533 |-INFO in ch.qos.logback.classic.util.ContextInitializer@48adcadf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
23:37:43 23:37:43,536 |-INFO in ch.qos.logback.classic.util.ContextInitializer@48adcadf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
23:37:43 23:37:43,542 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
23:37:43 23:37:43,545 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
23:37:43 23:37:43,546 |-INFO in ch.qos.logback.classic.util.ContextInitializer@48adcadf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 10 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
23:37:43 23:37:43,546 |-INFO in ch.qos.logback.classic.util.ContextInitializer@48adcadf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
23:37:43 23:37:43,548 |-INFO in ch.qos.logback.classic.util.ContextInitializer@48adcadf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
23:37:43 23:37:43,552 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
23:37:43 23:37:43,554 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
23:37:43 23:37:43,558 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@2ff7685 - Resource [logback.xml] occurs multiple times on the classpath.
23:37:43 23:37:43,558 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@2ff7685 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
23:37:43 23:37:43,558 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@2ff7685 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
23:37:43 23:37:43,793 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
23:37:43 23:37:43,793 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
23:37:43 23:37:43,814 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
23:37:43 23:37:43,816 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@f01e723 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
23:37:43 23:37:43,816 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@f01e723 - Please move "immediateFlush" property into the enclosing appender.
23:37:43 23:37:43,887 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@f01e723 - Setting the "immediateFlush" property of the enclosing appender to true
23:37:43 23:37:43,888 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
23:37:43 23:37:43,888 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
23:37:43 23:37:43,888 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
23:37:43 23:37:43,888 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
23:37:43 23:37:43,888 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
23:37:43 23:37:43,888 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
23:37:43 23:37:43,889 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2b3d5c09 - End of configuration.
23:37:43 23:37:43,892 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@d609083 - Registering current configuration as safe fallback point
23:37:43 23:37:43,892 |-INFO in ch.qos.logback.classic.util.ContextInitializer@48adcadf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 344 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
23:37:43 
23:37:43 lifecycle.test-compile:
23:37:43 Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
23:37:44 Compiling 86 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
23:37:44 warning: [options] bootstrap class path not set in conjunction with -source 8
23:37:44 warning: [options] source value 8 is obsolete and will be removed in a future release
23:37:44 warning: [options] target value 8 is obsolete and will be removed in a future release
23:37:44 warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
23:37:47 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:37:47 import omero.grid.RawAccessRequest;
23:37:47                  ^
23:37:47 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:37:47 import omero.grid.RawAccessRequest;
23:37:47                  ^
23:37:47 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:37:47 import omero.grid.RawAccessRequest;
23:37:47                  ^
23:37:47 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
23:37:47 import omero.model.ImportJob;
23:37:47                   ^
23:37:47 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
23:37:47 import omero.model.ImportJobI;
23:37:47                   ^
23:37:48 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1207: warning: [deprecation] newInstance() in Class has been deprecated
23:37:48         IObject link = (IObject) linkClass.newInstance();
23:37:48                                           ^
23:37:48   where T is a type-variable:
23:37:48     T extends Object declared in class Class
23:37:48 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
23:37:48         T copy = (T) obj.getClass().newInstance();
23:37:48                                    ^
23:37:48   where T is a type-variable:
23:37:48     T extends Object declared in class Class
23:37:48 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:37:48         RawAccessRequest raw = new RawAccessRequest();
23:37:48         ^
23:37:48 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:37:48         RawAccessRequest raw = new RawAccessRequest();
23:37:48                                    ^
23:37:48 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
23:37:48         raw.repoUuid = legacy.root().getHash().getValue();
23:37:48            ^
23:37:48 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
23:37:48         raw.command = "rm";
23:37:48            ^
23:37:48 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
23:37:48         raw.args = Arrays.asList(path);
23:37:48            ^
23:37:49 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
23:37:49         final IObject link = linkClass.newInstance();
23:37:49                                       ^
23:37:49   where T is a type-variable:
23:37:49     T extends Object declared in class Class
23:37:49 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
23:37:49             originalLink.setChild(annotationClass.newInstance());
23:37:49                                                  ^
23:37:49   where T is a type-variable:
23:37:49     T extends Object declared in class Class
23:37:49 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
23:37:49         RoiResult r = svc.findByImage(id, new RoiOptions());
23:37:49                          ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:37:50         final RawAccessRequest request = new RawAccessRequest();
23:37:50               ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:37:50         final RawAccessRequest request = new RawAccessRequest();
23:37:50                                              ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
23:37:50         request.repoUuid = repo.root().getHash().getValue();
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
23:37:50         request.command = "exists";
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
23:37:50         request.args = Collections.singletonList(dirPath);
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:37:50         final RawAccessRequest request = new RawAccessRequest();
23:37:50               ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
23:37:50         final RawAccessRequest request = new RawAccessRequest();
23:37:50                                              ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
23:37:50         request.repoUuid = repo.root().getHash().getValue();
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
23:37:50         request.command = "exists";
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
23:37:50         request.args = Collections.singletonList(dirName);
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactoryTest.java:60: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
23:37:50             RoiResult result = roiSvc.findByImage(imageId, new RoiOptions());
23:37:50                                      ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
23:37:50         final ImportJob importJob = new ImportJobI();
23:37:50               ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
23:37:50         final ImportJob importJob = new ImportJobI();
23:37:50                                         ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
23:37:50         importJob.setImageName(omero.rtypes.rstring(name));
23:37:50                  ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
23:37:50         importJob.setImageDescription(omero.rtypes.rstring(desc));
23:37:50                  ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
23:37:50         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
23:37:50         ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
23:37:50         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
23:37:50                           ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
23:37:50         final String savedName = sent.getImageName().getValue().toString();
23:37:50                                      ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
23:37:50         final String savedDesc = sent.getImageDescription().getValue().toString();
23:37:50                                      ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
23:37:50         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
23:37:50               ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
23:37:50         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
23:37:50                                               ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
23:37:50         final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
23:37:50                                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
23:37:50         final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
23:37:50                                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
23:37:50         RoiResult r = svc.findByImage(image.getId().getValue(),
23:37:50                          ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:37:50         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
23:37:50                                 ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:37:50         l = svc.getRoiMeasurements(image.getId().getValue(), options);
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:37:50         l = svc.getRoiMeasurements(image.getId().getValue(), options);
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:37:50         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
23:37:50                                 ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
23:37:50         Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
23:37:50                                          ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:37:50         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
23:37:50                                 ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
23:37:50         table = svc.getTable(f.getId().getValue());
23:37:50                    ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
23:37:50         RoiResult r = svc.findByImage(image.getId().getValue(),
23:37:50                          ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
23:37:50         r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
23:37:50         r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
23:37:50         r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
23:37:50         r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
23:37:50                ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
23:37:50                   ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
23:37:50                                   ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
23:37:50                                    ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
23:37:50                                                    ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Long(long) in Long has been deprecated and marked for removal
23:37:50             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
23:37:50                                       ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
23:37:50                                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
23:37:50                                                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
23:37:50                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
23:37:50                                                         ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
23:37:50                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
23:37:50                                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
23:37:50                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
23:37:50                                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
23:37:50                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
23:37:50                                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
23:37:50                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
23:37:50         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
23:37:50                                                        ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
23:37:50                 svc.getShapeStatsRestricted(
23:37:50                    ^
23:37:50 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
23:37:50         final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
23:37:50                                        ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
23:37:51         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
23:37:51                                      ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
23:37:51         request.typesToIgnore = Collections.singletonList("TagAnnotation");
23:37:51                ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
23:37:51         request.typesToIgnore = Collections.singletonList("IAnnotationLink");
23:37:51                ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
23:37:51         request.typesToIgnore = Collections.singletonList("Annotation");
23:37:51                ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
23:37:51                     request.typesToIgnore = Collections.singletonList("Annotation");
23:37:51                            ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
23:37:51         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
23:37:51                                      ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
23:37:51         p2.setRelatedTo(p1);
23:37:51           ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
23:37:51         Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
23:37:51                                           ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
23:37:51         pixels1.setRelatedTo(pixels2);
23:37:51                ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
23:37:51         Pixels pixels = pixels1.getRelatedTo();
23:37:51                                ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
23:37:51         Assert.assertNull(pixels1.getRelatedTo());
23:37:51                                  ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
23:37:51         pixels1.setRelatedTo(pixels2);
23:37:51                ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
23:37:51         Pixels pixels = pixels1.getRelatedTo();
23:37:51                                ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
23:37:51         Assert.assertNull(pixels1.getRelatedTo());
23:37:51                                  ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:37:51         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
23:37:51                                 ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:37:51         l = svc.getRoiMeasurements(image.getId().getValue(), options);
23:37:51                ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:37:51         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
23:37:51                                 ^
23:37:51 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
23:37:51         l = svc.getRoiMeasurements(image.getId().getValue(), options);
23:37:51                ^
23:37:51 Note: Some input files use unchecked or unsafe operations.
23:37:51 Note: Recompile with -Xlint:unchecked for details.
23:37:51 92 warnings
23:37:52 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_872148833.tmp
23:37:52 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
23:37:52 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:37:52 :: delivering :: omero#OmeroJava-test;working@5ffef7c1fdfa :: 5.6.3-687-b09aa0614c-ice36-b90 :: integration :: Sat Sep 26 23:37:31 UTC 2026
23:37:52 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
23:37:52 :: publishing :: omero#OmeroJava-test
23:37:52 	published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-687-b09aa0614c-ice36-b90.jar
23:37:52 	published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-687-b09aa0614c-ice36-b90.xml
23:37:52 
23:37:52 build-eclipse:
23:37:52 No sub-builds to iterate on
23:37:53 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
23:37:53 
23:37:53 retrieve:
23:37:53 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
23:37:53 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
23:37:59 
23:37:59 prepare:
23:37:59 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
23:38:03 
23:38:03 release-clients:
23:38:03 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-687-b09aa0614c-ice36-b90.zip
23:38:10 
23:38:10 release-zip:
23:38:10 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-687-b09aa0614c-ice36-b90.zip
23:38:24 
23:38:24 BUILD SUCCESSFUL
23:38:24 Total time: 4 minutes 49 seconds
23:38:24 ++ '[' -d .git ']'
23:38:24 ++ python3 ./build.py release-src
23:38:24 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
23:38:25 
23:38:25 release-src-git:
23:38:25 Releasing openmicroscopy-5.6.3-687-b09aa0614c-ice36-b90
23:38:27   - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-687-b09aa0614c-ice36-b90.zip
23:38:27   - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-687-b09aa0614c-ice36-b90-base.zip
23:38:28 
23:38:28 BUILD SUCCESSFUL
23:38:28 Total time: 4 seconds
23:38:28 ++ echo BUILD_NUMBER=90
23:38:28 ++ echo OMERO_BRANCH=merge_ci
23:38:28 ++ git_info
23:38:28 +++ git rev-parse HEAD
23:38:28 ++ HEAD=b09aa0614c9966dda50d2a27d29bc67cc4fe65a3
23:38:28 ++ git log --max-count=1 b09aa0614c9966dda50d2a27d29bc67cc4fe65a3
23:38:29 ++ env
23:38:29 ++ sort
23:38:29 Archiving artifacts
23:38:47 Finished: SUCCESS